##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921139_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1792334 Sequences flagged as poor quality 0 Sequence length 125 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.448569853609875 31.0 30.0 34.0 27.0 34.0 2 30.518306855753448 31.0 30.0 34.0 27.0 34.0 3 30.61559620026178 31.0 30.0 34.0 27.0 34.0 4 34.12627947692785 37.0 35.0 37.0 30.0 37.0 5 33.760972564265366 37.0 35.0 37.0 28.0 37.0 6 33.60499214990063 37.0 35.0 37.0 28.0 37.0 7 33.42419995380325 37.0 35.0 37.0 27.0 37.0 8 33.40530559594362 37.0 35.0 37.0 27.0 37.0 9 34.78507075132202 39.0 35.0 39.0 27.0 39.0 10-11 34.74575888199409 38.5 35.0 39.0 27.0 39.0 12-13 34.609940446367695 38.0 35.0 39.0 27.0 39.0 14-15 35.65626663333954 39.0 35.0 41.0 27.0 41.0 16-17 35.60283490688677 39.0 35.0 41.0 27.0 41.0 18-19 35.66731619218293 39.0 35.0 41.0 27.0 41.0 20-21 35.68276643750551 39.0 35.0 41.0 27.0 41.0 22-23 35.654475672503004 39.0 35.0 41.0 27.0 41.0 24-25 35.56506209222165 39.0 35.0 41.0 27.0 41.0 26-27 35.45123704622018 39.0 35.0 41.0 26.0 41.0 28-29 35.34771197778986 39.0 35.0 41.0 25.0 41.0 30-31 35.236894462750804 39.0 35.0 41.0 25.0 41.0 32-33 35.06832682970919 39.0 34.0 41.0 25.0 41.0 34-35 34.9297343575472 39.0 34.0 41.0 24.0 41.0 36-37 34.778546297732454 39.0 34.0 41.0 24.0 41.0 38-39 34.59455408422761 39.0 34.0 41.0 23.0 41.0 40-41 34.4445220589466 39.0 34.0 41.0 22.5 41.0 42-43 34.29850797898159 39.0 33.0 41.0 20.5 41.0 44-45 34.10106542642164 38.5 33.0 41.0 18.5 41.0 46-47 33.848019956101936 38.0 33.0 41.0 15.5 41.0 48-49 33.618563839105875 38.0 33.0 40.5 14.0 41.0 50-51 33.40577537445587 38.0 33.0 40.0 10.0 41.0 52-53 33.23839167253425 38.0 33.0 40.0 8.5 41.0 54-55 33.05325486209602 38.0 32.0 40.0 8.0 41.0 56-57 32.79631363350804 38.0 32.0 40.0 7.0 41.0 58-59 32.58565535218324 37.0 32.0 40.0 4.0 41.0 60-61 32.33505167005703 37.0 31.0 40.0 2.0 41.0 62-63 32.05149151887985 36.5 31.0 40.0 2.0 41.0 64-65 31.770842097510844 36.0 31.0 39.5 2.0 41.0 66-67 31.450498902548297 36.0 31.0 39.0 2.0 41.0 68-69 31.094992060631554 35.0 30.0 39.0 2.0 40.5 70-71 30.728418363987963 35.0 30.0 38.0 2.0 40.0 72-73 30.526374548493752 35.0 30.0 37.5 2.0 40.0 74-75 30.31658915135237 35.0 30.0 37.0 2.0 39.0 76-77 30.0628869953926 35.0 30.0 36.5 2.0 39.0 78-79 29.71953246437327 35.0 29.0 36.0 2.0 39.0 80-81 29.40887580105047 34.5 29.0 36.0 2.0 37.5 82-83 29.167592647352556 34.0 29.0 35.0 2.0 37.0 84-85 28.98952929532107 34.0 29.0 35.0 2.0 36.5 86-87 28.761202432135974 34.0 29.0 35.0 2.0 36.0 88-89 28.594648932620817 34.0 29.0 35.0 2.0 36.0 90-91 28.42001295517465 34.0 29.0 35.0 2.0 36.0 92-93 28.282465489133166 34.0 29.0 35.0 2.0 35.0 94-95 28.177698743649344 34.0 29.0 35.0 2.0 35.0 96-97 28.106398137847073 34.0 29.0 35.0 2.0 35.0 98-99 28.05357065145224 34.0 29.0 35.0 2.0 35.0 100-101 27.89360855733362 34.0 28.0 35.0 2.0 35.0 102-103 26.5453422743752 32.0 25.0 34.0 2.0 35.0 104-105 27.608015023985484 34.0 27.0 35.0 2.0 35.0 106-107 27.87006021199174 34.0 28.0 35.0 2.0 35.0 108-109 28.062855751216013 34.0 29.0 35.0 2.0 35.0 110-111 28.032888122414683 34.0 29.0 35.0 2.0 35.0 112-113 27.948213893169466 34.0 29.0 35.0 2.0 35.0 114-115 27.815065997743723 34.0 29.0 35.0 2.0 35.0 116-117 27.706006525569453 34.0 29.0 35.0 2.0 35.0 118-119 27.545416200328734 34.0 28.5 35.0 2.0 35.0 120-121 27.36074777357345 34.0 27.0 35.0 2.0 35.0 122-123 27.156650769332053 34.0 27.0 35.0 2.0 35.0 124-125 26.35885024777748 33.5 25.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 48987.0 3 15876.0 4 7747.0 5 6613.0 6 7698.0 7 9318.0 8 10134.0 9 10999.0 10 12047.0 11 13076.0 12 13956.0 13 15620.0 14 17639.0 15 14504.0 16 9923.0 17 9092.0 18 8401.0 19 8186.0 20 7903.0 21 8096.0 22 8662.0 23 10620.0 24 14305.0 25 18779.0 26 23677.0 27 27439.0 28 32326.0 29 38919.0 30 46068.0 31 55723.0 32 67918.0 33 85090.0 34 111512.0 35 155982.0 36 261315.0 37 420343.0 38 157602.0 39 239.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.135744302109636 19.53358206871752 13.861990947699681 24.468682681473158 2 15.791112244334332 20.855969126238403 38.78067165049313 24.572246978934135 3 19.044510541383026 24.522782521172314 30.01115316096427 26.421553776480387 4 13.164943117858991 17.29106418845276 36.18664407105545 33.3573486226328 5 13.394268485043062 37.727215622775304 34.75492399391393 14.123591898267703 6 32.274010393097456 36.65120851981781 16.93635190338314 14.138429183701598 7 27.47179531248082 32.75621931634672 21.121067274973523 18.650918096198936 8 25.566582670627646 35.93475538850586 19.861027102672324 18.637634838194167 9 25.91724548178232 16.050798455153757 19.908170821468254 38.12378524159567 10-11 24.754683604698045 26.49263611366487 27.78726271573041 20.965417565906677 12-13 25.52066868359544 23.971364931388056 27.891597007475173 22.616369377541332 14-15 22.91601209673144 25.408353977283195 25.744898260997196 25.930735664988173 16-17 22.33183686327822 28.38061179758617 26.765969997491467 22.521581341644143 18-19 22.27188942406694 27.168461661663674 28.867303188132105 21.692345726137283 20-21 23.232766029640576 26.38489553918034 28.575040125723543 21.807298305455536 22-23 22.760279949135672 26.36872284717457 28.21558237674372 22.65541482694604 24-25 22.475166660109362 26.57308978118423 28.43695405228709 22.51478950641932 26-27 22.409828431051114 26.581230518272886 28.511189358132288 22.49775169254371 28-29 22.42840548150699 26.5542409520283 28.79230997396867 22.225043592496036 30-31 22.716107463639457 26.577497773986604 28.366037802186028 22.340356960187915 32-33 22.493528003834925 26.51141130533145 28.48705126423658 22.508009426597045 34-35 22.398031589879587 26.66154362150183 28.43909519655919 22.501329592059392 36-37 22.669661729928077 26.49994767940731 28.28624247455475 22.54414811610986 38-39 22.57019595148931 26.59705207699649 28.352941504769024 22.479810466745175 40-41 22.67593418865094 26.479770337790743 28.325349959734332 22.518945513823986 42-43 22.87654669963465 26.402308912154243 28.069310895311773 22.651833492899335 44-45 22.915808028565056 26.53005472867408 27.876882946268346 22.677254296492517 46-47 22.849461165400736 26.492496497993674 27.773170445857026 22.884871890748563 48-49 22.867490265869968 26.533421954795237 27.768820759744873 22.830267019589918 50-51 22.757126313292687 26.73951807565124 27.468794910075207 23.034560700980872 52-53 22.79163563519208 26.90807642434817 27.17829790048182 23.121990039977934 54-55 22.784417695023677 26.701508442977772 27.153313024311387 23.36076083768716 56-57 22.814632921282474 26.815497949047074 27.064960794709382 23.304908334961073 58-59 22.52843318898165 26.701164114469396 27.429461136657885 23.340941559891064 60-61 22.899186922451673 26.81026879078607 27.166539566620933 23.124004720141325 62-63 22.61283451737385 26.830063234711815 27.249916495355414 23.307185752558926 64-65 22.405208614719676 26.701573456626132 27.416499416204726 23.476718512449462 66-67 22.58287132860069 26.78169833376913 27.1598227085035 23.47560762912668 68-69 22.623059235860747 26.673354466408455 27.260662343315733 23.442923954415065 70-71 22.615651579853914 26.467569334017245 27.207305209211828 23.709473876917013 72-73 22.704322549100596 26.447063787795233 27.28376091465416 23.56485274845001 74-75 22.720559449769475 26.546323504586045 27.129251100854486 23.603865944789995 76-77 22.515446497529005 26.470012142911354 27.32341997062487 23.69112138893477 78-79 22.515637351289257 26.481387387492966 27.329488904086542 23.67348635713124 80-81 22.4248559679509 26.618897350848314 27.10777060124992 23.848476079950867 82-83 22.385588817320475 26.503615686913545 27.17529970746364 23.93549578830234 84-85 22.52576886687297 26.454678796999946 26.972106873939232 24.047445462187852 86-87 22.420263841995023 26.361766710685902 27.07777454430602 24.140194903013054 88-89 22.354332308049447 26.296383307366415 27.146818346182865 24.202466038401273 90-91 22.357976740552242 26.325392307864014 27.18392151610527 24.132709435478468 92-93 22.194408852259944 26.363521706519993 27.18870542171902 24.253364019501046 94-95 22.01274602617899 26.456388763564032 27.186463018192704 24.344402192064273 96-97 22.31559162722355 26.282327986108804 27.064502924645627 24.33757746202202 98-99 22.21066758930116 26.250299949217897 26.922772144622957 24.616260316857982 100-101 22.03769246973707 26.426888355345486 26.91776378660186 24.617655388315583 102-103 22.08003571403659 26.282154839879745 26.900007672937548 24.737801773146114 104-105 22.012791301780858 26.450907617693982 26.75001492746369 24.786286153061468 106-107 21.809216473629114 26.546495302591666 26.847100418961055 24.79718780481816 108-109 21.760905424197176 26.528171183296838 26.911755514931553 24.799167877574433 110-111 21.63939182996461 26.72064438458287 26.725303729289283 24.91466005616324 112-113 21.538116872174477 26.81743005313183 26.718693677858834 24.925759396834856 114-115 21.639734397232374 26.804257456128116 26.560499958150825 24.995508188488685 116-117 21.518699873811805 26.65829503932256 26.69729815538696 25.12570693147867 118-119 21.52958089351838 26.550003780207838 26.712008702010543 25.20840662426324 120-121 21.4947128324845 26.712080363160783 26.62651819151643 25.16668861283829 122-123 21.367678030737366 26.710183415928114 26.63881795586222 25.283320597472304 124-125 21.160817186449375 26.81401061718271 26.543515013748078 25.481657182619845 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 95.0 1 79.5 2 127.0 3 216.5 4 169.5 5 111.0 6 175.5 7 399.0 8 667.0 9 730.0 10 576.0 11 403.0 12 360.5 13 408.0 14 473.0 15 544.0 16 622.5 17 743.0 18 851.0 19 962.0 20 1168.0 21 1437.5 22 1813.5 23 2374.0 24 3052.0 25 4062.0 26 5737.0 27 7749.5 28 10041.0 29 13308.0 30 16940.0 31 20493.0 32 25182.0 33 30418.0 34 34545.5 35 38513.5 36 43230.5 37 47260.5 38 50030.0 39 51950.5 40 54355.0 41 56363.5 42 58086.0 43 61415.5 44 65241.5 45 67943.5 46 70234.0 47 72666.0 48 73084.0 49 73791.5 50 79158.5 51 78418.5 52 70487.0 53 64876.5 54 61331.0 55 57549.5 56 52485.0 57 47169.0 58 42986.0 59 38219.5 60 31206.5 61 24970.0 62 19329.0 63 14300.5 64 10504.0 65 7716.0 66 5652.0 67 4125.0 68 2951.0 69 2086.5 70 1534.0 71 1144.0 72 853.0 73 699.5 74 529.0 75 344.0 76 226.5 77 132.0 78 88.0 79 48.5 80 18.5 81 12.0 82 6.0 83 1.0 84 1.5 85 2.0 86 1.5 87 2.0 88 2.5 89 2.0 90 1.0 91 1.5 92 1.0 93 0.0 94 1.0 95 3.0 96 4.0 97 2.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.07855678684887973 2 1.673795174336926E-4 3 9.484839321242581E-4 4 0.17831497923936054 5 0.07582292139746276 6 0.010210150563455249 7 0.014283052154341768 8 0.01037753008088894 9 0.017351676640626135 10-11 0.01737957322686508 12-13 0.018718609366334623 14-15 0.024827961752664402 16-17 0.02513482420129284 18-19 0.022707821198504296 20-21 0.02599961837470025 22-23 0.028370828205010894 24-25 0.02446530613155807 26-27 0.02401896075173489 28-29 0.025357996891204427 30-31 0.025302203718726532 32-33 0.021368785059034758 34-35 0.024046857337973838 36-37 0.027701310135276123 38-39 0.03146734927753421 40-41 0.027059688651780302 42-43 0.02758972379032033 44-45 0.02758972379032033 46-47 0.028119758928860355 48-49 0.02471637540770861 50-51 0.031188383415144724 52-53 0.026250687650850788 54-55 0.02898455310226777 56-57 0.027003895479302407 58-59 0.02309837340584958 60-61 0.02446530613155807 62-63 0.028872966757311977 64-65 0.034033835211517496 66-67 0.03322483421058798 68-69 0.028677690653639336 70-71 0.03799515045744822 72-73 0.03938997976939566 74-75 0.02401896075173489 76-77 0.01908126498744096 78-79 0.02178723385261899 80-81 0.02558116958111602 82-83 0.023433132440716965 84-85 0.016598468812174517 86-87 0.017546952744298773 88-89 0.017295883468148233 90-91 0.02086664650673368 92-93 0.02399106416549594 94-95 0.01810488446907775 96-97 0.022735717784743245 98-99 0.020308714781954704 100-101 0.018495436676423033 102-103 0.01793750495164406 104-105 0.018690712780095674 106-107 0.015733674638767105 108-109 0.016180020018590285 110-111 0.013195085291022767 112-113 0.010489116425844736 114-115 0.010265943735933146 116-117 0.009456942735003632 118-119 0.005830386523940293 120-121 0.0039055220734528274 122-123 0.008396872457923579 124-125 0.0553747236843133 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 1792334.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.98077235414775 #Duplication Level Percentage of deduplicated Percentage of total 1 68.02390016709626 33.31863168725815 2 14.549013159432922 14.252438030793677 3 6.466808504535633 9.502478256555793 4 3.5504712805182885 6.956193021640229 5 2.098381336884982 5.139016928707775 6 1.3426880898310167 3.945953980238311 7 0.9329036682970119 3.198603954364371 8 0.6510016578180388 2.550925120300652 9 0.45998225910411483 2.027725768811273 >10 1.8526855269136229 14.44278051240982 >50 0.05189479969580987 1.7325801635314644 >100 0.01820869441661752 1.5452207728012046 >500 0.0011449196976138134 0.4265372624582098 >1k 9.159357580910506E-4 0.9609145401290329 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3244 0.1809930515182996 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2791 0.155718744385812 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 2743 0.15304067210687294 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA 2669 0.14891197734350853 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 5.579317247789754E-5 0.0 10-11 0.0 0.0 0.0 5.579317247789754E-5 0.0 12-13 0.0 0.0 0.0 5.579317247789754E-5 0.0 14-15 0.0 0.0 0.0 5.579317247789754E-5 0.0 16-17 0.0 0.0 0.0 5.579317247789754E-5 0.0 18-19 0.0 0.0 0.0 1.1158634495579507E-4 0.0 20-21 0.0 0.0 0.0 2.510692761505389E-4 0.0 22-23 0.0 0.0 0.0 5.579317247789753E-4 0.0 24-25 0.0 0.0 0.0 0.0014785190706642845 0.0 26-27 0.0 0.0 0.0 0.003152314245001211 0.0 28-29 0.0 0.0 0.0 0.007894733905622502 0.0 30-31 0.0 0.0 0.0 0.022345165577397963 0.0 32-33 0.0 0.0 0.0 0.0532545831301532 0.0 34-35 0.0 0.0 0.0 0.09448573759131948 0.0 36-37 2.789658623894877E-5 0.0 0.0 0.16026588794276067 0.0 38-39 5.579317247789754E-5 0.0 0.0 0.2537752450157169 0.0 40-41 5.579317247789754E-5 0.0 0.0 0.3621534825540329 0.0 42-43 5.579317247789754E-5 0.0 0.0 0.4578108767673882 0.0 44-45 5.579317247789754E-5 0.0 0.0 0.5714057759323876 0.0 46-47 5.579317247789754E-5 0.0 0.0 0.7118092944730168 0.0 48-49 5.579317247789754E-5 0.0 0.0 0.8490326021824057 0.0 50-51 5.579317247789754E-5 0.0 0.0 0.9898266729303802 0.0 52-53 5.579317247789754E-5 0.0 0.0 1.1327129876462758 0.0 54-55 5.579317247789754E-5 0.0 0.0 1.2952384990743913 0.0 56-57 5.579317247789754E-5 0.0 0.0 1.4878086338818546 0.0 58-59 5.579317247789754E-5 0.0 0.0 1.6911468509775522 0.0 60-61 5.579317247789754E-5 0.0 0.0 1.9007339033907744 0.0 62-63 5.579317247789754E-5 0.0 0.0 2.1171835160187777 0.0 64-65 5.579317247789754E-5 0.0 0.0 2.359521160676526 0.0 66-67 5.579317247789754E-5 0.0 0.0 2.6383475401348186 0.0 68-69 5.579317247789754E-5 0.0 0.0 2.952742067047771 0.0 70-71 5.579317247789754E-5 0.0 0.0 3.2940567996813095 0.0 72-73 5.579317247789754E-5 0.0 0.0 3.6318007692762624 0.0 74-75 5.579317247789754E-5 0.0 0.0 3.986254794028345 0.0 76-77 5.579317247789754E-5 0.0 0.0 4.3930986077371745 0.0 78-79 5.579317247789754E-5 0.0 0.0 4.844019027703542 0.0 80-81 5.579317247789754E-5 0.0 0.0 5.32439824273824 0.0 82-83 5.579317247789754E-5 0.0 0.0 5.8142344005079405 0.0 84-85 5.579317247789754E-5 0.0 0.0 6.317879368465922 0.0 86-87 5.579317247789754E-5 0.0 0.0 6.861834903539184 0.0 88-89 5.579317247789754E-5 0.0 0.0 7.460607230571981 0.0 90-91 5.579317247789754E-5 0.0 0.0 8.086467142842796 0.0 92-93 5.579317247789754E-5 0.0 0.0 8.73277525282676 0.0 94-95 5.579317247789754E-5 0.0 0.0 9.393254828620112 0.0 96-97 5.579317247789754E-5 0.0 0.0 10.093403350045248 0.0 98-99 5.579317247789754E-5 0.0 0.0 10.845551108219786 0.0 100-101 5.579317247789754E-5 0.0 0.0 11.665348088023773 0.0 102-103 5.579317247789754E-5 0.0 0.0 12.48483820537913 0.0 104-105 5.579317247789754E-5 0.0 0.0 13.306113704253782 0.0 106-107 5.579317247789754E-5 0.0 0.0 14.15408623615911 0.0 108-109 5.579317247789754E-5 0.0 0.0 15.046414340184363 0.0 110-111 5.579317247789754E-5 0.0 0.0 15.967810687070603 0.0 112-113 5.579317247789754E-5 0.0 0.0 16.93068925769416 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 9405 0.0 27.017654 1 GGTATCA 7175 0.0 25.52192 1 GAGTACT 5120 0.0 24.112413 12-13 GTACCGT 150 1.6883908E-4 23.79733 6 TCAACGC 10840 0.0 22.83002 4 CAACGCA 10895 0.0 22.73199 5 ATCAACG 10910 0.0 22.682907 3 TATCAAC 11045 0.0 22.673704 2 AACGCAG 10990 0.0 22.628035 6 TACCGTA 135 0.002557914 22.03395 7 AGTACTT 5590 0.0 21.60612 12-13 GTACTTT 5805 0.0 21.164616 14-15 ACGCAGA 12220 0.0 20.106434 7 CATGGGG 3860 0.0 19.929201 4 CGCAGAG 12270 0.0 19.878487 8 ACTGCGC 270 1.1078537E-6 19.830004 8 CAGTGCG 310 1.9555773E-7 19.191933 9 AGTCCGT 195 9.922463E-4 18.304619 8 GCAGAGT 12655 0.0 18.288069 9 ACTTTTT 7280 0.0 18.102598 16-17 >>END_MODULE