##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921131_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2777022 Sequences flagged as poor quality 0 Sequence length 125 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.724007227886563 31.0 31.0 34.0 27.0 34.0 2 30.8389973143893 31.0 31.0 34.0 27.0 34.0 3 30.941763515017165 31.0 31.0 34.0 27.0 34.0 4 34.4556150437411 37.0 35.0 37.0 31.0 37.0 5 34.09707665261564 37.0 35.0 37.0 30.0 37.0 6 33.94308363419519 37.0 35.0 37.0 29.0 37.0 7 33.77068960922888 37.0 35.0 37.0 28.0 37.0 8 33.77084085037857 37.0 35.0 37.0 28.0 37.0 9 35.19692497934838 39.0 35.0 39.0 28.0 39.0 10-11 35.169820404735724 39.0 35.0 39.0 28.0 39.0 12-13 35.04586297839916 39.0 35.0 39.0 27.0 39.0 14-15 36.15423194342716 40.0 36.0 41.0 27.0 41.0 16-17 36.098932597581154 40.0 36.0 41.0 27.0 41.0 18-19 36.15507169190593 40.0 36.0 41.0 27.0 41.0 20-21 36.15576091943096 40.0 36.0 41.0 27.0 41.0 22-23 36.11040063780553 40.0 36.0 41.0 27.0 41.0 24-25 36.00573492035713 40.0 36.0 41.0 27.0 41.0 26-27 35.89186851958681 40.0 35.5 41.0 27.0 41.0 28-29 35.793538185869615 40.0 35.0 41.0 27.0 41.0 30-31 35.695414548390325 39.0 35.0 41.0 27.0 41.0 32-33 35.53645253800654 39.0 35.0 41.0 26.0 41.0 34-35 35.40767411997456 39.0 35.0 41.0 25.5 41.0 36-37 35.26079771784307 39.0 35.0 41.0 25.0 41.0 38-39 35.07329524216949 39.0 35.0 41.0 24.5 41.0 40-41 34.921934359900646 39.0 34.0 41.0 24.0 41.0 42-43 34.77159867656792 39.0 34.0 41.0 24.0 41.0 44-45 34.582467657800336 39.0 34.0 41.0 23.0 41.0 46-47 34.333861597063326 39.0 33.5 41.0 21.5 41.0 48-49 34.10650743854388 38.0 33.0 41.0 19.5 41.0 50-51 33.883550436402736 38.0 33.0 40.5 18.5 41.0 52-53 33.70377548323348 38.0 33.0 40.0 17.5 41.0 54-55 33.48548265011945 38.0 33.0 40.0 14.5 41.0 56-57 33.21046214253974 38.0 32.5 40.0 13.0 41.0 58-59 32.97654573856455 37.0 32.0 40.0 12.5 41.0 60-61 32.703215710930635 37.0 32.0 40.0 8.5 41.0 62-63 32.409281417288014 36.0 31.5 40.0 8.0 41.0 64-65 32.11463214911514 36.0 31.0 39.0 7.0 41.0 66-67 31.766072252938578 35.5 31.0 39.0 4.0 41.0 68-69 31.395214549974757 35.0 31.0 38.5 2.0 40.0 70-71 31.025098828889362 35.0 30.5 37.5 2.0 40.0 72-73 30.824172980984667 35.0 30.5 37.0 2.0 39.5 74-75 30.621645957432097 35.0 30.0 37.0 2.0 39.0 76-77 30.385069329663214 35.0 30.0 36.0 2.0 39.0 78-79 30.0620018494632 35.0 30.0 36.0 2.0 38.5 80-81 29.77257976350205 35.0 30.0 35.5 2.0 37.0 82-83 29.553886321390323 34.5 30.0 35.0 2.0 37.0 84-85 29.39345133023793 34.0 30.0 35.0 2.0 36.5 86-87 29.19216898533753 34.0 29.5 35.0 2.0 36.0 88-89 29.04426432343712 34.0 29.0 35.0 2.0 36.0 90-91 28.888176254995457 34.0 29.0 35.0 2.0 35.5 92-93 28.76413582607556 34.0 29.0 35.0 2.0 35.0 94-95 28.66278012921756 34.0 29.0 35.0 2.0 35.0 96-97 28.60218410225054 34.0 29.0 35.0 2.0 35.0 98-99 28.558855133304668 34.0 29.0 35.0 2.0 35.0 100-101 28.40599480306602 34.0 29.0 35.0 2.0 35.0 102-103 27.022056541143712 32.0 26.0 34.0 2.0 35.0 104-105 28.116359719152385 34.0 29.0 35.0 2.0 35.0 106-107 28.390315056920688 34.0 29.0 35.0 2.0 35.0 108-109 28.588951041799454 34.0 29.0 35.0 2.0 35.0 110-111 28.558571736197983 34.0 29.0 35.0 2.0 35.0 112-113 28.474697175607538 34.0 29.0 35.0 2.0 35.0 114-115 28.34971887151056 34.0 29.0 35.0 2.0 35.0 116-117 28.242667144876776 34.0 29.0 35.0 2.0 35.0 118-119 28.095191359665137 34.0 29.0 35.0 2.0 35.0 120-121 27.91592054366152 34.0 29.0 35.0 2.0 35.0 122-123 27.726638643842215 34.0 29.0 35.0 2.0 35.0 124-125 26.930582832977198 33.5 27.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 62879.0 3 21812.0 4 10846.0 5 9120.0 6 10431.0 7 12589.0 8 14274.0 9 15586.0 10 17102.0 11 18662.0 12 20162.0 13 21820.0 14 24906.0 15 20928.0 16 14374.0 17 12867.0 18 12322.0 19 12193.0 20 12209.0 21 12547.0 22 13285.0 23 15651.0 24 21079.0 25 28013.0 26 34844.0 27 41321.0 28 49121.0 29 58470.0 30 69925.0 31 84625.0 32 103300.0 33 131296.0 34 172936.0 35 247837.0 36 432964.0 37 674023.0 38 240360.0 39 343.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.806288383357845 19.402841449701583 13.87142115733933 24.919449009601248 2 16.01818789403863 20.40603353532502 38.15831548441274 25.417463086223613 3 18.737446011999975 24.291737216268167 29.845776350501225 27.125040421230633 4 13.313647891541272 16.864531211105618 35.52593319456119 34.295887702791916 5 14.006473924111942 37.13093154737021 34.08046780624645 14.782126722271393 6 32.503045828052876 35.71118599484505 17.015725944260716 14.770042232841355 7 28.08433168686783 32.06826199149697 20.9669548431476 18.880451478487608 8 26.179976511931848 34.56106087414364 19.98531365502359 19.27364895890092 9 26.296681674819045 15.58679642757711 19.70238693372318 38.41413496388067 10-11 25.09958107427445 25.760393501689983 27.425075359989254 21.714950064046313 12-13 25.857218775892864 23.365848906045798 27.563921670887563 23.21301064717377 14-15 23.475827520092555 24.64159736222286 25.295854844455363 26.58672027322922 16-17 22.925521923215392 27.56044897310091 26.264166384361044 23.249862719322653 18-19 22.85210327812934 26.47037847732367 28.128947462260147 22.54857078228684 20-21 23.98378164108137 25.561925289866334 27.817929056116075 22.636364012936216 22-23 23.60187133963669 25.458658673946662 27.467939008563164 23.471530977853487 24-25 23.153470744158756 25.777532923019514 27.68258538769397 23.38641094512776 26-27 23.069249531250815 25.831785544029106 27.751302421250944 23.34766250346913 28-29 22.963611719545533 25.71213841976104 28.095280289858515 23.228969570834916 30-31 23.360066132611014 25.741812667492724 27.70896968561796 23.189151514278304 32-33 22.963406657369095 25.726979143854955 27.693840694551696 23.61577350422425 34-35 23.05652362701693 25.896635481668557 27.65805628860042 23.388784602714097 36-37 23.507429690124155 25.68896068986571 27.50767462991129 23.29593499009885 38-39 23.306697885944573 25.806227345385775 27.505612715852042 23.381462052817614 40-41 23.230426148633146 25.732397374676307 27.624360139486082 23.412816337204465 42-43 23.50931969546038 25.54079051851809 27.46214641970715 23.48774336631438 44-45 23.42073584088743 25.699679921965217 27.241734919483406 23.637849317663942 46-47 23.527942323312914 25.70477619305769 27.03803628386641 23.729245199762982 48-49 23.41346510574138 25.91902826133468 26.898334547178226 23.769172085745716 50-51 23.237675879401507 26.11779169567897 26.851261166209973 23.793271258709545 52-53 23.429171213444402 26.019929519617136 26.70717358608345 23.843725680855016 54-55 23.338700497813512 26.097837284863157 26.528219037944773 24.03524317937856 56-57 23.443584041310878 26.162894988794104 26.37833196096272 24.015189008932296 58-59 23.170328689702146 25.99517381244864 26.83929739152109 23.995200106328127 60-61 23.418169597728173 26.195187462888597 26.602298516048243 23.784344423334982 62-63 23.00641225256599 26.24666829601002 26.688121888811185 24.058797562612803 64-65 23.034351413144538 26.246045180135898 26.639266754873752 24.08033665184581 66-67 23.129373000422003 26.334479384320446 26.46614106459365 24.0700065506639 68-69 23.33105083112017 25.982757682913256 26.471502521618635 24.21468896434794 70-71 23.132488584470774 25.768178524449525 26.740193884327564 24.35913900675214 72-73 23.265779445490367 25.767510441816547 26.56951472301537 24.397195389677716 74-75 23.1295777118505 25.94886019713708 26.494083924544665 24.42747816646775 76-77 23.009977552532746 25.676877127804694 26.78756304064585 24.525582279016707 78-79 23.04510659387641 25.763647542356427 26.619222375619465 24.572023488147693 80-81 22.87306598566069 25.899376324836965 26.5448071793782 24.68275051012414 82-83 22.973378671420672 25.723847681459656 26.551416052830962 24.751357594288713 84-85 23.007635998954807 25.683810252368115 26.390810509344526 24.91774323933255 86-87 22.898415168654964 25.534086200404353 26.571906092525538 24.99559253841515 88-89 22.850184528956838 25.53623607028776 26.551604539336704 25.0619748614187 90-91 22.835242501138588 25.558627200027082 26.553090856506177 25.05303944232815 92-93 22.800853055714438 25.54427144489283 26.56819763345834 25.08667786593439 94-95 22.659122173854087 25.482832473109646 26.704331504356283 25.15371384867999 96-97 22.732519839404645 25.2782991328038 26.684553015953284 25.304628011838272 98-99 22.717853625471793 25.305432404548938 26.477531451753627 25.499182518225638 100-101 22.511315048812328 25.47965488223219 26.587307804443828 25.421722264511654 102-103 22.5136598835754 25.319432924398207 26.59612016447685 25.570787027549546 104-105 22.40622840136906 25.369790171607708 26.45577698885686 25.76820443816637 106-107 22.276647994310956 25.411115066838896 26.586632509347435 25.72560442950272 108-109 22.18346571970345 25.387786119329608 26.577732798625654 25.851015362341283 110-111 22.1341712659926 25.518092682795068 26.436889445109706 25.910846606102623 112-113 21.96844330913089 25.60001613416131 26.435751284700604 25.99578927200719 114-115 21.90618390484206 25.604667720407825 26.453368712530693 26.035779662219415 116-117 21.887561771232704 25.478198113064852 26.499507702812398 26.13473241289005 118-119 21.83859119942583 25.405733110493873 26.401866550565433 26.353809139514862 120-121 21.742571832923407 25.58609687676679 26.36134148142013 26.30998980888967 122-123 21.58910130100797 25.697288811958046 26.24466181229278 26.4689480747412 124-125 21.38311811024757 25.702790552967294 26.342884144879385 26.571207191905756 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 89.0 1 74.5 2 130.5 3 216.5 4 193.0 5 153.0 6 203.5 7 465.5 8 779.5 9 869.5 10 719.0 11 585.5 12 574.0 13 584.5 14 664.0 15 762.5 16 882.5 17 1017.0 18 1181.0 19 1383.5 20 1593.0 21 1916.0 22 2291.5 23 2740.5 24 3404.0 25 4341.5 26 5854.0 27 8125.0 28 10785.0 29 14349.0 30 19063.5 31 24102.5 32 29543.5 33 35600.5 34 41715.5 35 47541.5 36 55571.0 37 63149.5 38 68213.5 39 72396.0 40 76304.0 41 79376.5 42 82799.5 43 89694.5 44 96245.5 45 101375.5 46 106358.0 47 110850.5 48 115861.0 49 119970.0 50 125835.0 51 125362.5 52 116507.5 53 112247.0 54 109017.0 55 102443.5 56 93404.0 57 83732.0 58 77994.0 59 71634.0 60 60883.5 61 50390.5 62 40254.0 63 29307.0 64 20737.5 65 15081.5 66 10655.0 67 7555.5 68 5431.5 69 3907.5 70 2977.0 71 2293.0 72 1749.0 73 1560.5 74 1205.5 75 863.5 76 614.5 77 334.5 78 167.5 79 88.0 80 51.0 81 27.5 82 18.0 83 16.0 84 15.0 85 12.0 86 8.0 87 3.0 88 3.0 89 2.5 90 1.5 91 1.0 92 1.5 93 2.0 94 3.0 95 2.5 96 2.0 97 3.0 98 1.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.08577533775389608 2 3.600979754571624E-4 3 5.761567607314598E-4 4 0.18336188910278708 5 0.07914953500548429 6 0.009830674729980534 7 0.01321559569927786 8 0.010550870680894858 9 0.019121202496775323 10-11 0.01856305063481672 12-13 0.020075462131736804 14-15 0.026827299171558596 16-17 0.027925597996702942 18-19 0.025674985650095676 20-21 0.02828569597216011 22-23 0.029852122165398766 24-25 0.02783557350283865 26-27 0.027025353058060038 28-29 0.02776355390774722 30-31 0.028159661680750098 32-33 0.02412656435562988 34-35 0.026665255082602875 36-37 0.02987012706417162 38-39 0.03455140074511473 40-41 0.029924141760490193 42-43 0.029942146659263053 44-45 0.029672073177670177 46-47 0.030860396496678818 48-49 0.02592705423291569 50-51 0.03244482758869033 52-53 0.028393725364797253 54-55 0.03176064143532172 56-57 0.028951877226755855 58-59 0.025584961156231385 60-61 0.02709737265315147 62-63 0.030698352407723093 64-65 0.0352535917972562 66-67 0.03483947912548046 68-69 0.029852122165398766 70-71 0.03919666462851213 72-73 0.041915404343213704 74-75 0.026305157107145715 76-77 0.019427285775913912 78-79 0.02315429982189554 80-81 0.02653922079119287 82-83 0.025044814193045644 84-85 0.01809492326672241 86-87 0.017302707720716654 88-89 0.017752830190038107 90-91 0.01982339354891679 92-93 0.023406368404715553 94-95 0.01856305063481672 96-97 0.021713907920066892 98-99 0.018274972254450992 100-101 0.018743099622545303 102-103 0.016600516668575187 104-105 0.01854504573604386 106-107 0.01647448237716518 108-109 0.015376183552020833 110-111 0.012495399748363535 112-113 0.010982988251443454 114-115 0.008966439588883343 116-117 0.008786390601154763 118-119 0.004861322668671692 120-121 0.0033129013742058937 122-123 0.007688091776010417 124-125 0.05648136745045593 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 2777022.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.226186986214266 #Duplication Level Percentage of deduplicated Percentage of total 1 65.67358902951412 27.07471661386539 2 14.494177369428776 11.950793328868519 3 6.6288500635357055 8.19846636668704 4 3.6821090628480935 6.071972669144388 5 2.40368986977372 4.95474840140802 6 1.5322132035385012 3.790038481909478 7 1.0820107885913393 3.1225025364097396 8 0.796512688826795 2.62697448371726 9 0.5970029443256517 2.2150939512680807 >10 2.9084659983891816 20.978174976850564 >50 0.14812866733369626 4.168929387263261 >100 0.05114464551419504 3.4567329236441346 >500 9.650980076162524E-4 0.2736643585770413 >1k 0.0011405703726167903 1.1171915203872207 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4028 0.145047464514145 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 3848 0.13856570095591608 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3712 0.13366836848969868 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA 3528 0.1270425657412869 No Hit CTTATACACATCTCCGAGCCCACGAGACGGACTCCTATCTCGTATGCCGT 3433 0.12362163497444385 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 3.600979754571624E-5 0.0 7 0.0 0.0 0.0 3.600979754571624E-5 0.0 8 0.0 0.0 0.0 3.600979754571624E-5 0.0 9 0.0 0.0 0.0 3.600979754571624E-5 0.0 10-11 0.0 0.0 0.0 3.600979754571624E-5 0.0 12-13 0.0 1.800489877285812E-5 0.0 7.201959509143247E-5 0.0 14-15 0.0 5.4014696318574355E-5 0.0 7.201959509143247E-5 0.0 16-17 0.0 7.201959509143247E-5 0.0 1.6204408895572307E-4 0.0 18-19 0.0 7.201959509143247E-5 0.0 2.3406368404715552E-4 0.0 20-21 0.0 7.201959509143247E-5 0.0 3.2408817791144615E-4 0.0 22-23 0.0 7.201959509143247E-5 0.0 7.922155460057573E-4 0.0 24-25 0.0 9.00244938642906E-5 0.0 0.002070563358878684 0.0 26-27 0.0 1.0802939263714871E-4 0.0 0.004123121818984509 0.0 28-29 0.0 1.0802939263714871E-4 0.0 0.009254517969249074 0.0 30-31 0.0 1.0802939263714871E-4 0.0 0.025242868079547086 0.0 32-33 0.0 1.0802939263714871E-4 0.0 0.05790375445351171 0.0 34-35 0.0 1.0802939263714871E-4 0.0 0.10397829041325564 0.0 36-37 0.0 1.2603429141000682E-4 0.0 0.18195750699850416 0.0 38-39 0.0 1.800489877285812E-4 0.0 0.2910851984607972 0.0 40-41 0.0 2.1605878527429742E-4 0.0 0.4096114470825222 0.0 42-43 0.0 2.880783803657299E-4 0.0 0.5141118795601908 0.0 44-45 0.0 2.880783803657299E-4 0.0 0.6381116174088646 0.0 46-47 0.0 3.2408817791144615E-4 0.0 0.7839693023677883 0.0 48-49 0.0 3.600979754571624E-4 0.0 0.9325097172438677 0.0 50-51 0.0 4.321175705485949E-4 0.0 1.0823824946291387 0.0 52-53 0.0 5.041371656400273E-4 0.0 1.233731673713784 0.0 54-55 0.0 5.041371656400273E-4 0.0 1.4066327166295407 0.0 56-57 0.0 5.041371656400273E-4 0.0 1.6108442785112973 0.0 58-59 0.0 5.041371656400273E-4 0.0 1.8234101134236602 0.0 60-61 0.0 5.221420644128854E-4 0.0 2.0419355698298394 0.0 62-63 0.0 5.401469631857435E-4 0.0 2.26633062323597 0.0 64-65 0.0 5.401469631857435E-4 0.0 2.510224982013106 0.0 66-67 0.0 5.761567607314598E-4 0.0 2.797421122338966 0.0 68-69 0.0 5.761567607314598E-4 0.0 3.115333619971322 0.0 70-71 0.0 6.481763558228923E-4 0.0 3.4549240157261987 0.0 72-73 0.0 7.201959509143248E-4 0.0 3.790679368042457 0.0 74-75 0.0 7.382008496871829E-4 0.0 4.144493633827892 0.0 76-77 0.0 9.362547361886222E-4 0.0 4.55036006196566 0.0 78-79 0.0 9.362547361886222E-4 0.0 4.9925063611307365 0.0 80-81 0.0 9.722645337343384E-4 0.0 5.46380259140907 0.0 82-83 0.0 0.0010442841288257707 0.0 5.952041431432664 0.0 84-85 0.0 0.001080293926371487 0.0 6.450975181327335 0.0 86-87 0.0 0.001080293926371487 0.0 6.997477873779898 0.0 88-89 0.0 0.001080293926371487 0.0 7.603792839955895 0.0 90-91 0.0 0.001080293926371487 0.0 8.222261112803572 0.0 92-93 0.0 0.0010982988251443454 0.0 8.85806810316951 0.0 94-95 0.0 0.0013323625091915007 0.0 9.516939368863481 0.0 96-97 0.0 0.0013323625091915007 0.0 10.218158156471212 0.0 98-99 0.0 0.0013323625091915007 0.0 10.973859767765614 0.0 100-101 0.0 0.0013323625091915007 0.0 11.777292365706861 0.0 102-103 0.0 0.0013323625091915007 0.0 12.573685048227922 0.0 104-105 0.0 0.0014403919018286496 0.0 13.382555125598573 0.0 106-107 0.0 0.001512411496920082 0.0 14.227380985818622 0.0 108-109 0.0 0.001512411496920082 0.0 15.109332947308303 0.0 110-111 0.0 0.0015844310920115146 0.0 16.029707362779263 0.0 112-113 0.0 0.001674455585875805 0.0 16.96761854965499 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 13110 0.0 30.986532 1 GGTATCA 9670 0.0 30.597347 1 TATCAAC 15915 0.0 25.325891 2 TCAACGC 15905 0.0 25.118702 4 ATCAACG 16035 0.0 24.951345 3 CAACGCA 16105 0.0 24.652967 5 AACGCAG 16295 0.0 24.277142 6 CATGGGG 8480 0.0 23.415554 4 GTACATG 16230 0.0 23.045048 1 TACATGG 16450 0.0 22.291224 2 GAGTACT 7335 0.0 22.18412 12-13 ACGCAGA 18020 0.0 21.689066 7 ACATGGG 16835 0.0 21.321795 3 GTACTTT 7740 0.0 20.984701 14-15 CGCAGAG 18645 0.0 20.930874 8 AGTACTT 8015 0.0 20.487577 12-13 GCAGAGT 19535 0.0 19.247444 9 AGAGTAC 17860 0.0 18.055223 10-11 TACTTTT 9090 0.0 17.769983 14-15 TAATACG 235 1.6664604E-4 17.76177 4 >>END_MODULE