Basic Statistics
Measure | Value |
---|---|
Filename | SRR2921120_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2569779 |
Sequences flagged as poor quality | 0 |
Sequence length | 125 |
%GC | 48 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 4970 | 0.0 | 39.060345 | 1 |
GTATCAA | 7320 | 0.0 | 36.770725 | 1 |
TATCAAC | 8600 | 0.0 | 30.79458 | 2 |
TCAACGC | 8680 | 0.0 | 30.304478 | 4 |
CAACGCA | 8995 | 0.0 | 29.37441 | 5 |
ATCAACG | 8980 | 0.0 | 29.292648 | 3 |
AACGCAG | 9350 | 0.0 | 28.511492 | 6 |
GTACATG | 13200 | 0.0 | 25.443686 | 1 |
TACATGG | 13050 | 0.0 | 25.401384 | 2 |
ACGCAGA | 10390 | 0.0 | 25.084885 | 7 |
ACATGGG | 12770 | 0.0 | 24.979666 | 3 |
CGCAGAG | 10645 | 0.0 | 24.14858 | 8 |
CATGGGG | 8945 | 0.0 | 23.68503 | 4 |
GCAGAGT | 11435 | 0.0 | 20.971157 | 9 |
CAGAGTA | 10920 | 0.0 | 18.937365 | 10-11 |
CCGTCTA | 330 | 3.7673271E-7 | 18.031822 | 9 |
AGAGTAC | 10380 | 0.0 | 17.7153 | 10-11 |
ACCGAGT | 710 | 0.0 | 17.600073 | 8 |
GAGTACT | 3130 | 0.0 | 17.015675 | 12-13 |
GTATAGG | 490 | 3.110472E-10 | 17.014015 | 1 |