##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921102_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3468314 Sequences flagged as poor quality 0 Sequence length 125 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.472031367402145 31.0 30.0 34.0 23.0 34.0 2 29.49869302491066 31.0 30.0 34.0 23.0 34.0 3 29.689906969207517 31.0 30.0 34.0 23.0 34.0 4 33.052775786736724 37.0 35.0 37.0 26.0 37.0 5 33.10909335198601 37.0 35.0 37.0 26.0 37.0 6 33.0844046992285 37.0 35.0 37.0 26.0 37.0 7 33.020808957897124 37.0 35.0 37.0 26.0 37.0 8 32.94750071648645 37.0 35.0 37.0 25.0 37.0 9 34.371806301274916 39.0 35.0 39.0 25.0 39.0 10-11 34.32984859502341 39.0 35.0 39.0 25.0 39.0 12-13 34.24243076030602 39.0 35.0 39.0 25.0 39.0 14-15 35.38973936615889 40.0 36.0 41.0 25.0 41.0 16-17 35.3414956085291 40.0 36.0 41.0 25.0 41.0 18-19 35.35596603998369 40.0 36.0 41.0 25.0 41.0 20-21 35.39756579133262 40.0 36.0 41.0 25.0 41.0 22-23 35.3118572885846 40.0 35.0 41.0 24.0 41.0 24-25 35.28281522376578 40.0 35.0 41.0 24.0 41.0 26-27 35.208568053526875 40.0 35.0 41.0 24.0 41.0 28-29 35.08067349150048 40.0 35.0 41.0 24.0 41.0 30-31 34.981258040650296 40.0 35.0 41.0 23.5 41.0 32-33 34.86371389672331 40.0 35.0 41.0 23.0 41.0 34-35 34.749965401056535 40.0 34.5 41.0 22.0 41.0 36-37 34.62720892629675 39.5 34.0 41.0 20.5 41.0 38-39 34.492205578848974 39.0 34.0 41.0 19.0 41.0 40-41 34.363227493243116 39.0 34.0 41.0 18.0 41.0 42-43 34.170726612411684 39.0 33.5 41.0 16.0 41.0 44-45 33.980289414395585 39.0 33.0 41.0 15.0 41.0 46-47 33.808471926128945 39.0 33.0 41.0 14.0 41.0 48-49 33.58619649201312 38.0 33.0 40.5 10.5 41.0 50-51 33.41466372421874 38.0 33.0 40.0 8.5 41.0 52-53 33.23520116690703 38.0 33.0 40.0 8.0 41.0 54-55 33.00905512015348 38.0 32.0 40.0 7.0 41.0 56-57 32.76370262323423 38.0 32.0 40.0 2.0 41.0 58-59 32.48606008567852 37.0 31.5 40.0 2.0 41.0 60-61 32.191113319036276 37.0 31.0 40.0 2.0 41.0 62-63 31.90773283503166 36.0 31.0 40.0 2.0 41.0 64-65 31.593226276513604 36.0 31.0 39.0 2.0 41.0 66-67 31.250788711748704 35.0 30.5 39.0 2.0 40.5 68-69 30.885974856947783 35.0 30.0 38.5 2.0 40.0 70-71 30.52758054778201 35.0 30.0 38.0 2.0 40.0 72-73 30.162981062268294 35.0 29.0 37.0 2.0 39.5 74-75 30.115897522542653 35.0 30.0 37.0 2.0 39.0 76-77 30.15726243356282 35.0 30.0 36.5 2.0 39.0 78-79 29.971078310671984 35.0 30.0 36.0 2.0 39.0 80-81 29.7450612891451 35.0 30.0 36.0 2.0 37.0 82-83 29.492563822076086 35.0 30.0 35.0 2.0 37.0 84-85 29.231845213553328 35.0 30.0 35.0 2.0 36.5 86-87 29.071074879610094 35.0 30.0 35.0 2.0 36.0 88-89 28.890235860997592 34.5 29.5 35.0 2.0 36.0 90-91 28.738154186731652 34.0 29.0 35.0 2.0 36.0 92-93 28.623494297229144 34.0 29.0 35.0 2.0 35.0 94-95 28.507137329549746 34.0 29.0 35.0 2.0 35.0 96-97 28.409880852771693 34.0 29.0 35.0 2.0 35.0 98-99 28.308273703015356 34.0 29.0 35.0 2.0 35.0 100-101 28.179074472495856 34.0 29.0 35.0 2.0 35.0 102-103 26.883207806444283 32.5 26.0 34.5 2.0 35.0 104-105 27.843014502147152 34.0 28.5 35.0 2.0 35.0 106-107 27.99609925744901 34.0 29.0 35.0 2.0 35.0 108-109 27.940165452147642 34.0 29.0 35.0 2.0 35.0 110-111 27.848978927513485 34.0 29.0 35.0 2.0 35.0 112-113 27.742778047201032 34.0 29.0 35.0 2.0 35.0 114-115 27.6116825062552 34.0 28.0 35.0 2.0 35.0 116-117 27.478537410395944 34.0 27.0 35.0 2.0 35.0 118-119 27.279695408201217 34.0 27.0 35.0 2.0 35.0 120-121 27.075743286219183 34.0 27.0 35.0 2.0 35.0 122-123 26.782442564312227 34.0 26.0 35.0 2.0 35.0 124-125 25.523891579597464 32.5 21.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 155557.0 3 22836.0 4 15164.0 5 14459.0 6 18886.0 7 19557.0 8 18305.0 9 19583.0 10 20689.0 11 21476.0 12 21668.0 13 21541.0 14 20714.0 15 18756.0 16 16016.0 17 14635.0 18 13869.0 19 13840.0 20 14071.0 21 15382.0 22 18296.0 23 23292.0 24 30807.0 25 38480.0 26 43811.0 27 48638.0 28 56460.0 29 66320.0 30 78114.0 31 94303.0 32 115753.0 33 147987.0 34 201680.0 35 300009.0 36 545838.0 37 875983.0 38 285201.0 39 338.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.55989981445086 18.191796570825154 11.691244145023845 25.557059469700143 2 16.169562904154677 20.985199701316493 37.86055819654252 24.98467919798631 3 19.044255325779552 24.596680064255334 29.118185892047695 27.240878717917422 4 12.910847775053998 16.491596123352085 36.17044669176263 34.42710940983129 5 13.835740533221205 38.11192837359827 34.01538372296716 14.036947370213365 6 32.850288963441265 36.24969074170892 17.002349641289253 13.897670653560562 7 28.249588736385146 32.557876387392284 21.133133371224336 18.059401504998235 8 25.89193395771645 35.571132739817216 19.986831493340983 18.550101809125355 9 26.455572035696406 15.901379347374874 18.875425723607446 38.76762289332127 10-11 24.949979833196362 26.32809044540857 27.7631154572958 20.958814264099264 12-13 25.347558598343607 24.051213724405475 27.446285873746806 23.154941803504112 14-15 23.021226954876163 25.388562455283537 24.64152510601356 26.948685483826747 16-17 23.260018999491894 27.888746040750345 25.514790843243514 23.336444116514247 18-19 23.270685826853004 27.31697364175715 26.626258043774758 22.786082487615083 20-21 24.330352343761387 26.59204597121979 26.165957384792378 22.911644300226442 22-23 23.903190209203245 26.490253392885716 25.843134137556877 23.76342226035416 24-25 23.431570703260945 26.581617134839732 26.22934025603452 23.757471905864808 26-27 23.473135687617276 26.63364217791347 26.125994562330522 23.767227572138733 28-29 23.45533988301535 26.854682279049236 26.175780567423306 23.514197270512103 30-31 23.718616137749056 26.765553271332255 25.959854743405796 23.555975847512897 32-33 23.384511798310314 26.849004167861363 26.03476830151172 23.731715732316605 34-35 23.617283795637164 26.84096543359192 26.093519290880657 23.448231479890264 36-37 23.684317606093504 26.749481559206718 25.98242582386346 23.583775010836323 38-39 23.50910508504312 26.840249242829966 26.041498342536336 23.609147329590574 40-41 23.600000981207426 26.79189759311262 26.09740474964998 23.510696676029983 42-43 23.455481277288655 26.6963872714361 26.14476365150511 23.703367799770135 44-45 23.518143084436886 26.74308016636571 26.112124879314454 23.62665186988295 46-47 23.370743757588066 26.76526442252208 26.055635828143824 23.808355991746026 48-49 23.346604993527666 26.772779358012112 26.137577571697335 23.74303807676289 50-51 23.191993219483166 26.8969541774115 26.122229635907885 23.788822967197447 52-53 23.315567277753573 26.69244043273379 26.004513174487293 23.98747911502535 54-55 23.22630905106631 26.65975126186418 26.126580188995735 23.987359498073783 56-57 23.293368050785528 26.62867930147963 26.053875929169006 24.02407671856583 58-59 23.238311902359293 26.386591353509008 26.247698156866505 24.12739858726519 60-61 23.261894359698296 26.425528267879272 26.25159361940473 24.060983753017705 62-63 23.126650892553354 26.354139521541647 26.331283506643683 24.187926079261313 64-65 23.054205742317126 26.260943586784013 26.323935939979805 24.36091473091906 66-67 23.076718877882772 26.353677332289582 26.22018331946648 24.349420470361167 68-69 23.151939971567696 26.249222858556 26.274703142428873 24.324134027447432 70-71 22.97990367580637 25.989641563827508 26.524761544886438 24.50569321547968 72-73 23.044951143072367 26.013785936579037 26.497190968284322 24.44407195206427 74-75 22.856233802963228 26.017794374830455 26.59689074611704 24.52908107608928 76-77 22.796907415688636 25.852507584058117 26.76584131277402 24.58474368747923 78-79 22.77643916038031 25.87654432131665 26.79709565951806 24.549920858784976 80-81 22.74655204531101 25.888096423690765 26.808763056400824 24.5565884745974 82-83 22.696296582754133 25.7578916822857 26.886213832299706 24.65959790266046 84-85 22.815346386063748 25.70447513939716 26.70814910589566 24.77202936864343 86-87 22.703152565541917 25.643039366777188 26.882232105226635 24.771575962454268 88-89 22.72046252020309 25.47352118576341 26.9053511572526 24.9006651367809 90-91 22.718956274109352 25.523973933979587 26.92291154250504 24.834158249406023 92-93 22.639720663258867 25.51721799993797 26.982076950319055 24.860984386484105 94-95 22.4563640878835 25.426987001252073 27.063940656804515 25.05270825405992 96-97 22.488788674779663 25.348719033412216 27.11775808700063 25.04473420480749 98-99 22.425459368288266 25.415221496429087 26.987395513849183 25.171923621433468 100-101 22.325311931384476 25.560293266726404 27.000148624644854 25.11424617724427 102-103 22.21381694636328 25.486248574396935 27.121223792777826 25.178710686461958 104-105 22.009519471955382 25.584955004459953 27.069485393671123 25.33604012991354 106-107 21.961262171855015 25.582737591507605 27.140316589074136 25.315683647563247 108-109 21.918777207886432 25.67322022471651 27.125317605717537 25.282684961679518 110-111 21.87792276976344 25.824623281039834 27.076019645341503 25.221434303855222 112-113 21.96373623329586 25.90480515972955 26.997557138603096 25.133901468371494 114-115 21.82280290718287 25.946617187205774 27.070250955119725 25.160328950491635 116-117 21.71904975171468 25.83575539452087 27.107885800295957 25.337309053468495 118-119 21.7913947815368 25.805469616097334 27.0846354099038 25.318500192462068 120-121 21.816772180854578 25.89505213362071 27.078438996173432 25.20973668935128 122-123 21.87514609403001 25.941422714887363 26.988422715464527 25.195008475618096 124-125 21.827892121560247 26.01609777006773 26.840036888919037 25.315973219452985 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2132.0 1 1585.5 2 883.5 3 663.0 4 534.0 5 440.0 6 403.0 7 395.5 8 416.5 9 450.5 10 486.5 11 543.0 12 567.0 13 614.0 14 746.0 15 869.0 16 1005.5 17 1210.0 18 1484.5 19 1807.5 20 2169.5 21 2731.5 22 3497.5 23 4561.5 24 5867.5 25 7667.0 26 10297.0 27 13601.0 28 16727.0 29 20506.5 30 25420.5 31 30486.0 32 37016.5 33 43975.0 34 50486.0 35 57462.5 36 65786.5 37 73367.5 38 79382.5 39 85741.5 40 92616.0 41 98830.0 42 104159.5 43 111784.5 44 119922.0 45 126356.5 46 132596.0 47 139192.5 48 145025.5 49 149468.5 50 151883.5 51 149912.0 52 144756.0 53 141576.5 54 137408.0 55 129075.5 56 118801.0 57 107366.5 58 97134.5 59 85875.0 60 71976.0 61 58830.0 62 47939.0 63 37240.0 64 27461.0 65 20562.5 66 15418.0 67 11619.0 68 8962.5 69 6953.5 70 5690.0 71 4579.0 72 3425.0 73 2823.0 74 2277.0 75 1720.5 76 1233.0 77 820.5 78 549.5 79 371.5 80 270.5 81 187.0 82 136.0 83 109.0 84 83.5 85 61.5 86 41.5 87 28.0 88 31.5 89 32.0 90 22.0 91 19.0 92 15.0 93 12.0 94 16.5 95 16.0 96 12.0 97 16.0 98 20.0 99 20.0 100 32.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.28633508961414683 2 0.07029352013687343 3 0.07972173223070345 4 0.08502690356178823 5 0.09292699565264276 6 0.1263149760950133 7 0.11507031946934446 8 0.11498382211068549 9 0.12144229155722347 10-11 0.09980353566603253 12-13 0.08854446281392053 14-15 0.09880881604145415 16-17 0.10046668208241814 18-19 0.09260983867089312 20-21 0.09196110848095068 22-23 0.07408498769142587 24-25 0.08649735865899108 26-27 0.09833308056882971 28-29 0.09106730244147446 30-31 0.08643969375321842 32-33 0.09651663603699089 34-35 0.0897986745144759 36-37 0.0898419231938054 38-39 0.08009655411822575 40-41 0.09213410319826867 42-43 0.08122101978079263 44-45 0.07773229298154666 46-47 0.06764093447133103 48-49 0.06941413032384035 50-51 0.0721243808951554 52-53 0.08372944318190337 54-55 0.08948151753272628 56-57 0.09774201528465992 58-59 0.06751118843334254 60-61 0.08453675186272061 62-63 0.09062039942173632 64-65 0.08113452242213363 66-67 0.07541128052419706 68-69 0.08331137261505159 70-71 0.08158142544187175 72-73 0.06265292012199587 74-75 0.09151420546121257 76-77 0.09559399754462831 78-79 0.07708356279160422 80-81 0.08959684734427159 82-83 0.09392171527722115 84-85 0.09785734509620524 86-87 0.08630994771522993 88-89 0.06516134352310661 90-91 0.08975542583514641 92-93 0.06477210540914116 94-95 0.09369105565413051 96-97 0.08202832846160989 98-99 0.0750652910895611 100-101 0.09252334131223412 102-103 0.06449819710672101 104-105 0.07123057485567916 106-107 0.08927969036252197 108-109 0.09589673829993478 110-111 0.08837146809660257 112-113 0.07802061751040996 114-115 0.09147095678188306 116-117 0.08494040620312925 118-119 0.07773229298154666 120-121 0.11103377606525823 122-123 0.08880395488989751 124-125 0.11126443568834886 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 3468314.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.02947314511091 #Duplication Level Percentage of deduplicated Percentage of total 1 69.32401459839544 33.98919912063306 2 14.130242229705987 13.855966638705636 3 6.178048440737913 9.087193803430617 4 3.3049080158942514 6.481515952493959 5 1.8921208963727478 4.638484533800541 6 1.2836462807079074 3.776190050867392 7 0.8428768865873573 2.892806677289867 8 0.579868914415492 2.274453389361519 9 0.44397924834084934 1.959126177016278 >10 1.909514093098243 15.756272370940504 >50 0.08342324416552421 2.7374666145975466 >100 0.02635141379180984 2.059638045540928 >500 7.690936030056556E-4 0.2631456007565019 >1k 2.366441835097965E-4 0.22854102456560227 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 2.883245288633036E-5 0.0 3 0.0 0.0 0.0 2.883245288633036E-5 0.0 4 0.0 0.0 0.0 2.883245288633036E-5 0.0 5 0.0 0.0 0.0 8.649735865899108E-5 2.883245288633036E-5 6 0.0 0.0 0.0 8.649735865899108E-5 8.649735865899108E-5 7 2.883245288633036E-5 0.0 0.0 8.649735865899108E-5 1.1532981154532144E-4 8 2.883245288633036E-5 0.0 0.0 8.649735865899108E-5 1.441622644316518E-4 9 2.883245288633036E-5 0.0 0.0 1.1532981154532144E-4 1.7299471731798216E-4 10-11 4.324867932949554E-5 0.0 0.0 2.0182717020431252E-4 1.7299471731798216E-4 12-13 5.766490577266072E-5 0.0 0.0 2.0182717020431252E-4 1.7299471731798216E-4 14-15 5.766490577266072E-5 0.0 0.0 2.450758495338081E-4 2.5949207597697325E-4 16-17 5.766490577266072E-5 0.0 0.0 2.5949207597697325E-4 2.883245288633036E-4 18-19 8.649735865899108E-5 0.0 0.0 2.739083024201384E-4 3.459894346359643E-4 20-21 1.1532981154532144E-4 0.0 0.0 3.892381139654599E-4 3.748218875222947E-4 22-23 1.1532981154532144E-4 0.0 0.0 6.631464163855984E-4 3.892381139654599E-4 24-25 1.441622644316518E-4 0.0 0.0 0.0010668007567942233 4.0365434040862504E-4 26-27 1.441622644316518E-4 0.0 0.0 0.0020182717020431253 4.0365434040862504E-4 28-29 1.7299471731798216E-4 0.0 0.0 0.005838571709481898 4.3248679329495543E-4 30-31 2.0182717020431252E-4 0.0 0.0 0.019000586452091708 4.3248679329495543E-4 32-33 2.0182717020431252E-4 0.0 0.0 0.04953415405871556 4.6131924618128577E-4 34-35 2.0182717020431252E-4 0.0 0.0 0.10183622359451883 4.6131924618128577E-4 36-37 2.0182717020431252E-4 0.0 0.0 0.19130332490080193 4.6131924618128577E-4 38-39 2.5949207597697325E-4 0.0 0.0 0.33832000216820046 4.6131924618128577E-4 40-41 2.5949207597697325E-4 0.0 0.0 0.5177587727062775 4.6131924618128577E-4 42-43 3.3157320819279915E-4 0.0 0.0 0.6891965375683977 4.6131924618128577E-4 44-45 3.748218875222947E-4 0.0 0.0 0.89247974664347 4.901516990676162E-4 46-47 4.180705668517902E-4 0.0 0.0 1.1355661569281215 5.478166048402768E-4 48-49 4.3248679329495543E-4 0.0 0.0 1.3917569170496096 5.766490577266072E-4 50-51 4.3248679329495543E-4 0.0 0.0 1.6643389266369768 5.766490577266072E-4 52-53 4.3248679329495543E-4 0.0 0.0 1.9360703788641973 6.343139634992678E-4 54-55 4.3248679329495543E-4 0.0 0.0 2.240915903231368 6.919788692719286E-4 56-57 4.901516990676162E-4 0.0 0.0 2.600355677138806 6.919788692719286E-4 58-59 4.901516990676162E-4 0.0 0.0 3.0014295130141044 6.919788692719286E-4 60-61 4.901516990676162E-4 0.0 0.0 3.4246322564796614 6.919788692719286E-4 62-63 4.901516990676162E-4 0.0 0.0 3.850934488630499 7.496437750445894E-4 64-65 4.901516990676162E-4 0.0 0.0 4.2998990287499925 7.640600014877546E-4 66-67 5.189841519539465E-4 0.0 0.0 4.811112834651072 7.784762279309197E-4 68-69 5.478166048402768E-4 0.0 0.0 5.394234778050661 7.784762279309197E-4 70-71 6.198977370561028E-4 0.0 0.0 6.03019219136445 7.784762279309197E-4 72-73 6.487301899424331E-4 0.0 0.0 6.673372134126264 9.082222659194064E-4 74-75 6.631464163855983E-4 0.0 0.0 7.311852387067606 9.226384923625715E-4 76-77 6.775626428287635E-4 0.0 0.0 8.023148999773376 9.226384923625715E-4 78-79 7.208113221582591E-4 0.0 0.0 8.816646935658074 9.226384923625715E-4 80-81 8.073086808172501E-4 0.0 0.0 9.663902979949334 9.370547188057367E-4 82-83 8.073086808172501E-4 0.0 0.0 10.526988040875192 9.803033981352323E-4 84-85 8.505573601467456E-4 0.0 0.0 11.38443635726177 9.803033981352323E-4 86-87 8.649735865899109E-4 0.0 0.0 12.28338898957822 9.947196245783975E-4 88-89 8.649735865899109E-4 0.0 0.0 13.257147420908257 0.0010091358510215627 90-91 8.938060394762412E-4 0.0 0.0 14.294510243305538 0.0010091358510215627 92-93 8.938060394762412E-4 0.0 0.0 15.33804321062049 0.0010091358510215627 94-95 8.938060394762412E-4 0.0 0.0 16.37766938056935 0.001037968303907893 96-97 8.938060394762412E-4 0.0 0.0 17.4263777731774 0.0010523845303510582 98-99 9.226384923625715E-4 0.0 0.0 18.534005283258665 0.0010668007567942233 100-101 9.370547188057367E-4 0.0 0.0 19.72396386255685 0.0010668007567942233 102-103 9.514709452489019E-4 0.0 0.0 20.929189225658348 0.0010956332096805537 104-105 0.001037968303907893 0.0 0.0 22.095216869060877 0.0010956332096805537 106-107 0.001037968303907893 1.441622644316518E-5 0.0 23.252018127539777 0.0010956332096805537 108-109 0.001037968303907893 2.883245288633036E-5 0.0 24.413533492065596 0.0011100494361237188 110-111 0.0010812169832373885 4.324867932949554E-5 0.0 25.63373731444154 0.0011677143418963795 112-113 0.0010956332096805537 5.766490577266072E-5 0.0 26.888295004431548 0.001182130568339545 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACATGG 14150 0.0 30.20096 2 GTACATG 14490 0.0 30.04769 1 GTATCAA 8430 0.0 28.653921 1 CATGGGG 8785 0.0 27.846563 4 ACATGGG 15090 0.0 27.729218 3 TCAACGC 9330 0.0 25.007826 4 AACGCAG 9350 0.0 24.824148 6 CAACGCA 9520 0.0 24.383326 5 ATCAACG 9755 0.0 23.9183 3 TATCAAC 10175 0.0 23.339481 2 GGTATCA 6485 0.0 21.980852 1 ACGCAGA 10410 0.0 21.95182 7 CGCAGAG 10725 0.0 21.195496 8 GTATAGC 1245 0.0 21.07851 1 TACCGTA 325 1.454282E-8 20.14185 7 GTGTAGC 2555 0.0 18.674788 1 ATGGGGA 4635 0.0 18.363337 5 GCAGAGT 11920 0.0 18.321766 9 ACCGTCG 360 4.7022695E-8 18.18309 8 ATGGGGG 4670 0.0 17.078636 5 >>END_MODULE