##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921008_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2270213 Sequences flagged as poor quality 0 Sequence length 125 %GC 47 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.193957130894766 31.0 28.0 33.0 16.0 34.0 2 28.24950302020119 31.0 28.0 34.0 16.0 34.0 3 28.37316674690877 31.0 28.0 34.0 16.0 34.0 4 31.784053302487475 35.0 32.0 37.0 18.0 37.0 5 31.87736216821946 35.0 32.0 37.0 19.0 37.0 6 31.82200348601651 35.0 32.0 37.0 18.0 37.0 7 31.71148522187125 35.0 32.0 37.0 17.0 37.0 8 31.68622459654667 35.0 32.0 37.0 17.0 37.0 9 32.80338893310892 37.0 32.0 39.0 17.0 39.0 10-11 32.758011472932274 37.0 32.0 39.0 16.5 39.0 12-13 32.656519894829245 37.0 32.0 39.0 15.0 39.0 14-15 33.53977203901132 38.0 32.0 40.0 14.0 41.0 16-17 33.42830430448596 38.0 32.0 40.0 12.0 41.0 18-19 33.49250400733323 38.0 32.0 40.0 13.0 41.0 20-21 33.526906506129606 38.0 32.0 40.0 13.0 41.0 22-23 33.46381242641109 38.0 32.0 40.0 13.0 41.0 24-25 33.38858930858029 38.0 32.0 40.0 12.0 41.0 26-27 33.25039302479547 38.0 32.0 40.0 10.5 41.0 28-29 33.18412501382029 38.0 32.0 40.0 10.0 41.0 30-31 33.04137232938055 38.0 31.5 40.0 9.5 41.0 32-33 32.961408026471524 38.0 31.0 40.0 9.0 41.0 34-35 32.7876994361322 38.0 31.0 40.0 8.0 41.0 36-37 32.62566772368936 38.0 31.0 40.0 8.0 41.0 38-39 32.477213812096046 38.0 30.5 40.0 6.5 41.0 40-41 32.38981892888465 38.0 30.5 40.0 2.0 41.0 42-43 32.16269288388358 38.0 30.0 40.0 2.0 41.0 44-45 31.98178783224305 37.5 30.0 40.0 2.0 41.0 46-47 31.772941129312535 37.0 30.0 40.0 2.0 41.0 48-49 31.595112000503917 37.0 30.0 40.0 2.0 41.0 50-51 31.359611851398967 37.0 30.0 40.0 2.0 41.0 52-53 31.164646445069252 36.5 29.0 40.0 2.0 41.0 54-55 30.942941257053853 36.0 29.0 40.0 2.0 41.0 56-57 30.738910622042955 36.0 29.0 39.5 2.0 41.0 58-59 30.478938980615474 35.5 28.0 39.0 2.0 41.0 60-61 30.297756862461803 35.0 28.0 39.0 2.0 41.0 62-63 30.191217960605456 35.0 28.0 39.0 2.0 41.0 64-65 29.968535551509923 35.0 28.0 39.0 2.0 40.5 66-67 29.704501295693397 35.0 28.0 38.5 2.0 40.0 68-69 29.39221716200198 34.5 28.0 38.0 2.0 40.0 70-71 29.06783746723325 34.0 28.0 37.0 2.0 40.0 72-73 28.786203321009967 34.0 27.0 37.0 2.0 39.0 74-75 28.48353017976727 34.0 27.0 36.0 2.0 39.0 76-77 28.207268216682753 34.0 26.5 36.0 2.0 39.0 78-79 27.886888366862493 34.0 26.0 35.0 2.0 37.5 80-81 27.573898352269147 34.0 26.0 35.0 2.0 37.0 82-83 27.295397171983424 33.5 26.0 35.0 2.0 36.5 84-85 27.04422822880496 33.0 25.5 35.0 2.0 36.0 86-87 26.969107744515604 33.0 25.5 35.0 2.0 36.0 88-89 27.052226376996344 34.0 26.0 35.0 2.0 36.0 90-91 26.965413377511272 34.0 26.0 35.0 2.0 35.0 92-93 26.816283317908933 33.0 25.0 35.0 2.0 35.0 94-95 26.721815970571924 33.0 25.0 35.0 2.0 35.0 96-97 26.626124509021842 33.0 25.0 35.0 2.0 35.0 98-99 26.561379703137987 33.0 25.0 35.0 2.0 35.0 100-101 26.38714473047243 33.0 24.5 35.0 2.0 35.0 102-103 25.03513106479436 31.0 21.5 34.0 2.0 35.0 104-105 26.067071019327262 33.0 24.0 35.0 2.0 35.0 106-107 26.245682673828405 33.0 24.0 35.0 2.0 35.0 108-109 26.242462711648642 33.0 24.0 35.0 2.0 35.0 110-111 26.141116934842678 33.0 24.0 35.0 2.0 35.0 112-113 26.047447089766465 33.0 24.0 35.0 2.0 35.0 114-115 25.920067852664044 33.0 23.0 35.0 2.0 35.0 116-117 25.785334019318892 33.0 23.0 35.0 2.0 35.0 118-119 25.589316949554956 33.0 19.5 35.0 2.0 35.0 120-121 25.374537763637157 33.0 18.5 35.0 2.0 35.0 122-123 25.150136793331725 33.0 10.0 35.0 2.0 35.0 124-125 23.98909353439523 31.5 2.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 139177.0 3 20288.0 4 12680.0 5 11424.0 6 12692.0 7 14099.0 8 14918.0 9 15890.0 10 16540.0 11 17583.0 12 17494.0 13 17634.0 14 18047.0 15 16283.0 16 14187.0 17 12648.0 18 11774.0 19 11204.0 20 11289.0 21 12222.0 22 14742.0 23 19337.0 24 26079.0 25 33377.0 26 38503.0 27 43476.0 28 51073.0 29 59416.0 30 68938.0 31 81923.0 32 99640.0 33 122557.0 34 157078.0 35 214596.0 36 324364.0 37 388946.0 38 107967.0 39 128.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.622681375432656 19.228693109837643 13.268690554090407 24.87993496063929 2 15.49115141913447 20.065741503983393 39.45322911852547 24.989877958356665 3 19.08552465487319 24.35553491626327 29.09894949624902 27.45999093261452 4 12.84002703386194 16.01320147716969 36.22326022383121 34.92351126513716 5 13.882959859553592 38.01185512169011 33.917234421704876 14.187950597051419 6 33.25029745346357 35.85484887690118 16.955486160760106 13.939367508875147 7 28.5868652597989 32.4323752853396 20.716558110604723 18.26420134425678 8 26.22890158743584 35.753516622350965 19.389350841117214 18.62823094909598 9 26.348683341115525 16.441849401358507 19.006933493088532 38.20253376443743 10-11 25.105012148172683 26.540723304690623 27.310581123384953 21.04368342375174 12-13 25.594650867899194 23.822685882979254 27.195386181937366 23.38727706718419 14-15 22.8437605168984 25.213597655843916 24.732419269865154 27.210222557392534 16-17 23.153209742654994 28.213464823525165 25.426397531123058 23.20692790269679 18-19 23.229890763553904 27.312349105568508 26.858889452223206 22.598870678654382 20-21 24.240984596246424 26.48416157939958 26.46581460036293 22.809039223991064 22-23 23.722449932494488 26.24226659941811 26.316533674568372 23.71874979351903 24-25 23.400572954074473 26.36139363469035 26.69551039142758 23.542523019807597 26-27 23.16867589820755 26.737124854857836 26.4394622824189 23.654736964515713 28-29 23.216326548591677 26.933365049054753 26.486856146077326 23.363452256276243 30-31 23.60411703762175 26.67105986496201 26.298225335832992 23.426597761583242 32-33 23.11056275336279 26.61474936492743 26.378229707961324 23.896458173748456 34-35 23.528940154995052 26.733683615831655 26.30334493722117 23.434031291952127 36-37 23.669934805357684 26.370405742432375 26.36201385124591 23.597645600964032 38-39 23.312449563559607 26.69424592896435 26.284631554094297 23.70867295338175 40-41 23.644497910308907 26.540816811970092 26.38878121321897 23.425904064502035 42-43 23.595900827494738 26.43102452222096 26.30896293684315 23.66411171344116 44-45 23.452355571687328 26.666180657847445 26.285970525840984 23.595493244624244 46-47 23.56622709636659 26.773115770890644 26.035745275535305 23.624911857207465 48-49 23.38441878633157 26.715475471780397 26.28986492305246 23.610240818835578 50-51 23.299385395257392 26.872167808262176 26.1563734377447 23.67207335873573 52-53 23.615850690582484 26.678750850701594 26.045344322158765 23.66005413655715 54-55 23.579548332732067 26.578432577412407 26.133540010157645 23.708479079697877 56-57 23.403875281113923 26.843029244657817 26.06283693201002 23.69025854221824 58-59 23.40879075762555 26.601054771094763 26.12320522839424 23.86694924288545 60-61 23.366731463090925 26.66117372709825 26.298252082317447 23.673842727493373 62-63 23.2518184515425 26.740747609740907 26.413434041360013 23.59399989735658 64-65 23.237758882956907 26.6822408703463 26.311446775386532 23.768553471310263 66-67 23.275154440524346 26.833194542973 26.04787089126757 23.843780125235085 68-69 23.57467334027124 26.520970646051172 26.26252815082787 23.641827862849716 70-71 23.347880422836184 26.362572733612062 26.272444505724202 24.017102337827556 72-73 23.47259762976166 26.45771992702011 26.25960900737266 23.810073435845567 74-75 23.29453513411247 26.704616910088713 26.15018596661785 23.850661989180967 76-77 23.403707983012822 26.430534454711363 26.318957546594262 23.846800015681556 78-79 23.530077680209498 26.6005492896016 26.25036065024965 23.619012379939257 80-81 23.439406216803814 26.553314437134752 26.16703555294287 23.840243793118564 82-83 23.426715199953133 26.58609207272769 26.261031819079818 23.72616090823936 84-85 23.566245880308028 26.580349520789852 26.002579515230856 23.85082508367126 86-87 23.362789051257444 26.503075349645766 26.176167323338934 23.957968275757857 88-89 23.399588496762195 26.464146756273532 26.15877893395906 23.977485813005213 90-91 23.292142495470124 26.61970469193207 26.26086052562202 23.827292286975783 92-93 23.318760094862245 26.427862029045006 26.349184602748384 23.904193273344365 94-95 23.146493773776736 26.502769070286636 26.456625240740838 23.89411191519579 96-97 23.370685398202994 26.290454519624813 26.414501317336462 23.92435876483573 98-99 23.119098506379206 26.4539985234703 26.223026463006587 24.2038765071439 100-101 23.070221484823044 26.476960155112288 26.443852087339216 24.008966272725452 102-103 22.936101116111548 26.284589942661402 26.60500505721525 24.1743038840118 104-105 22.942306023403226 26.43684287733769 26.36349579674973 24.25735530250935 106-107 22.86841385861143 26.661114034772755 26.263038349947536 24.20743375666828 108-109 22.80576007048652 26.568903328836146 26.321363473663922 24.30397312701341 110-111 22.74514002336807 26.597324655779193 26.307096244367255 24.350439076485486 112-113 22.84125826579115 26.82892502151314 26.24512444141279 24.08469227128292 114-115 22.802314052717986 26.7612183161991 26.230923746530916 24.205543884552007 116-117 22.78621169057491 26.74329579554445 26.381786801100233 24.08870571278041 118-119 22.743513501607858 26.68778908418131 26.17649002246597 24.392207391744858 120-121 22.625210183243226 26.895481715544594 26.26879755141202 24.21051054980016 122-123 22.70647097110271 26.729580874198383 26.2250924825635 24.33885567213541 124-125 22.697943181595313 26.753315552836742 26.237662053477674 24.311079212090267 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 815.0 1 651.5 2 383.0 3 247.5 4 199.0 5 182.5 6 182.5 7 197.0 8 240.0 9 273.0 10 277.5 11 306.0 12 359.0 13 395.5 14 431.5 15 515.0 16 618.0 17 754.0 18 860.0 19 1027.5 20 1313.5 21 1658.5 22 2257.0 23 3099.5 24 4113.5 25 5516.5 26 7928.5 27 11242.5 28 13799.0 29 16384.5 30 19459.5 31 23740.0 32 29248.0 33 33042.5 34 36216.5 35 40049.5 36 44991.0 37 49752.0 38 53242.5 39 56729.0 40 61425.0 41 66721.5 42 69875.0 43 72885.5 44 76139.0 45 79234.0 46 82785.5 47 85864.0 48 88292.0 49 89799.0 50 91334.5 51 91526.0 52 89016.5 53 87961.0 54 87175.5 55 82175.5 56 75570.0 57 68888.0 58 63686.0 59 58098.0 60 49899.5 61 42020.5 62 34327.5 63 25838.0 64 19550.0 65 15819.5 66 12308.5 67 9524.0 68 7290.0 69 5621.5 70 4440.5 71 3222.0 72 2397.5 73 1974.5 74 1462.0 75 1033.5 76 826.5 77 604.5 78 405.0 79 259.0 80 176.0 81 123.0 82 83.0 83 54.5 84 36.5 85 33.0 86 28.5 87 18.5 88 10.0 89 8.5 90 10.5 91 11.5 92 8.5 93 5.5 94 4.0 95 4.5 96 5.5 97 5.0 98 2.0 99 3.5 100 9.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03603186132754944 2 0.01823617431492111 3 0.023786314323810145 4 0.020570757017072845 5 0.013567008910617639 6 0.004845360325220585 7 0.0048894090554498625 8 0.0060346760414110925 9 0.0032155573067372974 10-11 0.005219774532169449 12-13 0.007157918662257682 14-15 0.0025107776230688487 16-17 0.0013655106371076194 18-19 0.0 20-21 0.0037221177043739945 22-23 0.0012333644464197853 24-25 0.0021363634161199853 26-27 0.0011012182557319512 28-29 0.002004217225432151 30-31 0.0016298030184832876 32-33 0.0 34-35 0.006188846597213565 36-37 0.007246016122716238 38-39 0.0012774131766490632 40-41 9.25023334814839E-4 42-43 0.002092314685890707 44-45 9.25023334814839E-4 46-47 0.020196342810123984 48-49 0.002753045639329878 50-51 0.009580598824867975 52-53 0.0012333644464197853 54-55 8.809746045855608E-5 56-57 1.5417055580247316E-4 58-59 0.0064751633437038734 60-61 0.0011452669859612294 62-63 0.009624647555097253 64-65 0.00969072065044117 66-67 1.1012182557319512E-4 68-69 0.003325679132310492 70-71 0.0050215552461376975 72-73 0.012003278987478268 74-75 0.002092314685890707 76-77 0.0013214619068783412 78-79 3.5238984183422434E-4 80-81 0.004030458815978941 82-83 8.149015092416438E-4 84-85 8.369258743562829E-4 86-87 0.013589033275732278 88-89 0.0 90-91 3.303654767195853E-4 92-93 0.0081269907273018 94-95 0.0060346760414110925 96-97 0.00449297048338636 98-99 0.0011012182557319512 100-101 0.016452200740635352 102-103 0.00832521001333355 104-105 0.00810496636218716 106-107 0.018434393600952864 108-109 0.012135425178166102 110-111 0.019777879872945842 112-113 0.003898312625291107 114-115 0.01508669010352773 116-117 0.006387065883245316 118-119 0.00497750651590842 120-121 0.007488284138977268 122-123 0.008391283108677467 124-125 0.054950790961024364 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 2270213.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.30942011073986 #Duplication Level Percentage of deduplicated Percentage of total 1 75.13713565889724 41.557914020756 2 13.014164915055673 14.39611829354531 3 4.959546424393869 8.229289102365547 4 2.343341311764874 5.184353963010226 5 1.2651946688897993 3.4988591731747167 6 0.7995821904716054 2.653465637151579 7 0.5255272757032182 2.0346626210065337 8 0.3554647504491333 1.5728439373720335 9 0.25506361146543866 1.2696678397354026 >10 1.2279858425809456 11.948143227089968 >50 0.07884061313210476 3.032094220488232 >100 0.035660502632563956 3.491199586994751 >500 0.0017686825934283609 0.667743250356108 >1k 7.235519700387923E-4 0.4636451269536202 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.404873022927805E-5 2 0.0 0.0 0.0 0.0 4.404873022927805E-5 3 0.0 0.0 0.0 0.0 4.404873022927805E-5 4 0.0 0.0 0.0 0.0 4.404873022927805E-5 5 0.0 0.0 0.0 0.0 4.404873022927805E-5 6 0.0 0.0 0.0 0.0 8.80974604585561E-5 7 0.0 0.0 0.0 0.0 8.80974604585561E-5 8 0.0 0.0 0.0 0.0 8.80974604585561E-5 9 0.0 0.0 0.0 0.0 8.80974604585561E-5 10-11 0.0 0.0 0.0 0.0 8.80974604585561E-5 12-13 0.0 0.0 0.0 0.0 2.863167464903073E-4 14-15 0.0 0.0 0.0 0.0 3.3036547671958536E-4 16-17 0.0 0.0 0.0 4.404873022927805E-5 4.404873022927805E-4 18-19 0.0 0.0 0.0 4.404873022927805E-5 4.404873022927805E-4 20-21 0.0 0.0 0.0 1.1012182557319512E-4 4.404873022927805E-4 22-23 0.0 0.0 0.0 3.5238984183422434E-4 4.404873022927805E-4 24-25 0.0 0.0 0.0 8.589502394709219E-4 5.285847627513365E-4 26-27 0.0 0.0 0.0 0.0016518273835979267 5.726334929806146E-4 28-29 0.0 0.0 0.0 0.0035459227834568827 5.726334929806146E-4 30-31 0.0 0.0 0.0 0.010263354143421784 5.726334929806146E-4 32-33 0.0 0.0 0.0 0.025151824960917765 6.607309534391707E-4 34-35 0.0 0.0 0.0 0.04622914237562731 7.047796836684488E-4 36-37 0.0 0.0 0.0 0.07871508091971988 7.047796836684488E-4 38-39 0.0 0.0 0.0 0.1291288526671286 7.928771441270048E-4 40-41 0.0 0.0 0.0 0.1841457167234969 8.369258743562829E-4 42-43 0.0 0.0 0.0 0.23892031276360412 8.80974604585561E-4 44-45 0.0 0.0 0.0 0.30276894723094266 9.69072065044117E-4 46-47 0.0 0.0 0.0 0.3807351997367648 0.001013120795273395 48-49 0.0 0.0 0.0 0.46114615677031184 0.001079193890617312 50-51 0.0 0.0 0.0 0.5445083787292206 0.0011452669859612291 52-53 0.0 0.0 0.0 0.6324516686319742 0.0012553888115344244 54-55 0.0 0.0 0.0 0.7252843675901777 0.0013214619068783414 56-57 0.0 0.0 0.0 0.8300983211707448 0.0013875350022222585 58-59 0.0 0.0 0.0 0.9490959658851394 0.0014315837324515366 60-61 0.0 0.0 0.0 1.0722341912410862 0.0014536080975661755 62-63 0.0 0.0 0.0 1.199446924143241 0.0014536080975661755 64-65 0.0 0.0 0.0 1.3358438172982008 0.0014536080975661755 66-67 0.0 0.0 0.0 1.4976568277954536 0.0015417055580247314 68-69 0.0 0.0 0.0 1.6780584024494618 0.0015857542882540096 70-71 0.0 0.0 0.0 1.8721811565698903 0.0016298030184832878 72-73 0.0 0.0 0.0 2.06835217664598 0.0017839735742857608 74-75 0.0 0.0 0.0 2.2711965793518054 0.001828022304515039 76-77 0.0 0.0 0.0 2.50793647996906 0.0018500466696296778 78-79 0.0 0.0 0.0 2.768418646179896 0.001894095399858956 80-81 0.0 0.0 0.0 3.0418511390781395 0.0019821928603175124 82-83 0.0 0.0 0.0 3.3271988135034025 0.0022024365114639024 84-85 0.0 0.0 0.0 3.6235806948511 0.0022244608765785412 86-87 0.0 0.0 0.0 3.9532193675219025 0.0023566070672663753 88-89 0.0 0.0 0.0 4.310873032618526 0.0024667288928395706 90-91 0.0 0.0 0.0 4.6925552800552195 0.0024667288928395706 92-93 0.0 0.0 0.0 5.087958706958334 0.0025548263532981265 94-95 0.0 0.0 0.0 5.499858383332313 0.0025988750835274047 96-97 0.0 0.0 0.0 5.928188236081812 0.0027310212742152388 98-99 0.0 0.0 0.0 6.399707868821119 0.002863167464903073 100-101 0.0 0.0 0.0 6.908801068446 0.002863167464903073 102-103 0.0 0.0 0.0 7.427695110546896 0.0029953136555909074 104-105 0.0 0.0 0.0 7.949188027731319 0.003039362385820185 106-107 4.404873022927805E-5 0.0 0.0 8.489798093835248 0.003039362385820185 108-109 4.404873022927805E-5 0.0 0.0 9.060647613241578 0.003061386750934824 110-111 4.404873022927805E-5 0.0 0.0 9.666868263022016 0.0031494842113933804 112-113 4.404873022927805E-5 0.0 0.0 10.295421619028698 0.0032155573067372974 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 5890 0.0 35.666897 1 TCAACGC 6910 0.0 30.309225 4 ATCAACG 7000 0.0 29.920853 3 TATCAAC 6960 0.0 29.83634 2 GGTATCA 3800 0.0 29.756092 1 CAACGCA 7045 0.0 29.55886 5 AACGCAG 7105 0.0 29.30989 6 CATGGGG 6145 0.0 27.401527 4 TACATGG 10170 0.0 26.679228 2 ACATGGG 9910 0.0 26.538597 3 GTACATG 10805 0.0 26.4927 1 ACGCAGA 8085 0.0 25.683584 7 CGCAGAG 8285 0.0 24.632147 8 GCGTAAG 200 1.8239043E-6 23.804874 1 GCAGAGT 9555 0.0 20.237335 9 AGAGTAC 7710 0.0 20.02507 10-11 GTATAAT 1585 0.0 19.899975 1 ATGGGGA 3665 0.0 19.80553 5 GTGTAGC 1775 0.0 19.781515 1 GTGTAGG 995 0.0 19.139597 1 >>END_MODULE