##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921007_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3963223 Sequences flagged as poor quality 0 Sequence length 125 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.467382733699313 31.0 28.0 33.0 16.0 34.0 2 28.528994457288928 31.0 28.0 34.0 16.0 34.0 3 28.642024180824546 31.0 28.0 34.0 16.0 34.0 4 32.1264301806888 35.0 32.0 37.0 20.0 37.0 5 32.175747112892715 35.0 33.0 37.0 22.0 37.0 6 32.11772539672887 35.0 32.0 37.0 21.0 37.0 7 32.01594636486516 35.0 32.0 37.0 19.0 37.0 8 32.01418391041837 35.0 32.0 37.0 19.0 37.0 9 33.19920958270579 37.0 33.0 39.0 18.0 39.0 10-11 33.132007838065135 37.0 33.0 39.0 17.5 39.0 12-13 33.04838246548327 37.0 33.0 39.0 17.0 39.0 14-15 33.94649026814792 38.0 33.0 41.0 17.0 41.0 16-17 33.79692121790775 38.0 32.5 41.0 17.0 41.0 18-19 33.87332683525504 38.0 33.0 41.0 17.5 41.0 20-21 33.88941260686063 38.0 33.0 40.5 18.0 41.0 22-23 33.82700027225316 38.0 32.5 40.0 17.5 41.0 24-25 33.73656529042146 38.0 32.5 40.5 17.0 41.0 26-27 33.588916646880584 38.0 32.0 40.0 16.0 41.0 28-29 33.5094693132332 38.0 32.0 40.0 16.0 41.0 30-31 33.387242781947926 38.0 32.0 40.0 15.0 41.0 32-33 33.30621226713713 38.0 32.0 40.0 12.5 41.0 34-35 33.141968544288325 38.0 32.0 40.0 9.0 41.0 36-37 32.98650631064666 38.0 31.5 40.0 9.0 41.0 38-39 32.852449004257394 38.0 31.0 40.0 9.0 41.0 40-41 32.76606413517483 38.0 31.0 40.0 8.0 41.0 42-43 32.54710736690819 38.0 31.0 40.0 7.5 41.0 44-45 32.3645001807872 38.0 31.0 40.0 4.0 41.0 46-47 32.16940833256166 37.0 30.5 40.0 2.0 41.0 48-49 31.997936780241737 37.0 30.0 40.0 2.0 41.0 50-51 31.756453396642076 37.0 30.0 40.0 2.0 41.0 52-53 31.557477966796217 37.0 30.0 40.0 2.0 41.0 54-55 31.329156724211582 36.0 29.5 40.0 2.0 41.0 56-57 31.103309982809446 36.0 29.0 39.5 2.0 41.0 58-59 30.824603737917347 35.5 29.0 39.0 2.0 41.0 60-61 30.60866307548175 35.0 29.0 39.0 2.0 40.5 62-63 30.474297560344194 35.0 29.0 39.0 2.0 40.5 64-65 30.22560236958657 35.0 29.0 39.0 2.0 40.0 66-67 29.94954523124235 35.0 29.0 38.0 2.0 40.0 68-69 29.631007011212844 34.5 28.0 37.5 2.0 40.0 70-71 29.304022382792994 34.0 28.0 37.0 2.0 39.5 72-73 29.023090171812186 34.0 28.0 36.0 2.0 39.0 74-75 28.729200829728732 34.0 28.0 36.0 2.0 39.0 76-77 28.461880393810794 34.0 27.5 35.5 2.0 37.5 78-79 28.161574052229714 34.0 27.0 35.0 2.0 37.0 80-81 27.862552523539556 34.0 26.0 35.0 2.0 37.0 82-83 27.618219943717524 33.5 26.0 35.0 2.0 36.0 84-85 27.39714898707441 33.0 26.0 35.0 2.0 36.0 86-87 27.348365459122537 33.0 26.0 35.0 2.0 35.5 88-89 27.464342909798415 34.0 27.0 35.0 2.0 35.0 90-91 27.38946092611998 34.0 26.5 35.0 2.0 35.0 92-93 27.245073012545596 34.0 26.0 35.0 2.0 35.0 94-95 27.16813172006723 34.0 26.0 35.0 2.0 35.0 96-97 27.07647437451791 34.0 26.0 35.0 2.0 35.0 98-99 27.014039835759938 34.0 25.5 35.0 2.0 35.0 100-101 26.843709147832456 33.5 25.0 35.0 2.0 35.0 102-103 25.470728495469473 31.5 23.5 34.0 2.0 35.0 104-105 26.506948763670376 33.0 25.0 35.0 2.0 35.0 106-107 26.703827162892424 33.0 25.0 35.0 2.0 35.0 108-109 26.695017035377518 34.0 25.0 35.0 2.0 35.0 110-111 26.580894640548866 33.5 25.0 35.0 2.0 35.0 112-113 26.480161600798137 33.0 25.0 35.0 2.0 35.0 114-115 26.339666730840026 33.0 24.5 35.0 2.0 35.0 116-117 26.201527771715092 33.0 24.0 35.0 2.0 35.0 118-119 26.008637540708662 33.0 23.5 35.0 2.0 35.0 120-121 25.78060482592072 33.0 23.0 35.0 2.0 35.0 122-123 25.545252941860703 33.0 19.5 35.0 2.0 35.0 124-125 24.354193670151794 32.0 10.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 222115.0 3 33208.0 4 21450.0 5 18710.0 6 20198.0 7 23206.0 8 25012.0 9 26064.0 10 27491.0 11 28240.0 12 28104.0 13 27878.0 14 27425.0 15 24949.0 16 21751.0 17 19501.0 18 18835.0 19 18218.0 20 18458.0 21 20870.0 22 24917.0 23 33537.0 24 44767.0 25 56982.0 26 66738.0 27 77237.0 28 90855.0 29 105297.0 30 123159.0 31 146620.0 32 179075.0 33 221058.0 34 285358.0 35 390628.0 36 600983.0 37 682451.0 38 161757.0 39 121.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.38896278777446 17.80376438399039 12.233263585125206 25.574009243109945 2 16.350321527057307 19.303610829232174 38.25681129853221 26.089256345178306 3 19.79714929853018 22.99305230795167 28.440059025980467 28.769739367537678 4 13.51616955004988 14.846468708366636 34.59431453075232 37.04304721083116 5 14.75857369975017 36.82267141090671 33.44605950488304 14.972695384460092 6 35.28081382072074 34.092986814398564 16.17717229345691 14.449027071423796 7 30.09612606531627 31.01340516398458 20.08990606922742 18.80056270147173 8 27.448900852943563 35.02927845748479 18.72075119190549 18.801069497666152 9 26.66877443467492 15.586036045356208 18.375405425727926 39.36978409424095 10-11 26.252640506220192 25.350512494453408 26.667261331230225 21.729585668096174 12-13 26.326346634871665 22.49448161220827 26.947560333216625 24.231611419703437 14-15 23.600889955950084 23.981234470085735 23.82963664337482 28.588238930589366 16-17 24.26375390444527 27.04659294175712 24.64393502982884 24.045718123968772 18-19 24.334272888505136 26.36660869196611 25.790802082042823 23.50831633748593 20-21 25.004504113504673 25.55177282916869 25.608875399818924 23.834847657507712 22-23 24.716642687690786 25.155808673509295 25.597422180191025 24.53012645860889 24-25 24.37433678481732 25.474856078126262 25.58983966010076 24.560967476955657 26-27 24.20583614800505 25.691493307616494 25.60485793919098 24.497812605187473 28-29 24.27449251694638 25.792538545699717 25.650490223785088 24.282478713568814 30-31 24.486066178414028 25.71395625306493 25.438773227714456 24.361204340806584 32-33 24.23873501929301 25.709886336182237 25.390487160385266 24.660891484139487 34-35 24.382064136107324 25.727343508208506 25.5753348247377 24.31525753094647 36-37 24.560314449625466 25.501503270175675 25.52907173997167 24.409110540227193 38-39 24.46810738605239 25.64193109587579 25.49442250487553 24.39553901319629 40-41 24.49229340691089 25.610389675928204 25.56546346165249 24.331853455508412 42-43 24.490868569345064 25.543378632496427 25.444453486193563 24.52129931196495 44-45 24.368191763736515 25.599126052803456 25.507608369414527 24.525073814045502 46-47 24.483267334616336 25.61748791649952 25.499842327401506 24.39940242148264 48-49 24.40235261403943 25.78799171654579 25.30903355243054 24.500622116984236 50-51 24.350859546232872 25.934869375746878 25.34824533257696 24.366025745443295 52-53 24.515759416432203 25.687785072361212 25.357869779216646 24.43858573198994 54-55 24.391926756433854 25.650374758876314 25.403390933875652 24.554307550814176 56-57 24.332217529197603 25.829879588782884 25.38170758277916 24.456195299240353 58-59 24.407538091297994 25.586153417952907 25.409200252440566 24.597108238308536 60-61 24.31652452563585 25.66863897860315 25.571142006459425 24.443694489301574 62-63 24.23042812334751 25.707374245524882 25.5704372558448 24.491760375282805 64-65 24.176359376719127 25.682653455712313 25.521074641690213 24.619912525878348 66-67 24.203131471621596 25.72103996841959 25.45474111747365 24.621087442485162 68-69 24.337539376456586 25.525620813176186 25.51296634795414 24.623873462413084 70-71 24.071948623698567 25.530113655217036 25.623389081160724 24.774548639923673 72-73 24.198242341646782 25.545285802122308 25.52750758917717 24.72896426705374 74-75 24.03071405690922 25.721483476534306 25.534459890543765 24.71334257601271 76-77 24.236332919396336 25.39572238188003 25.56634365450731 24.80160104421632 78-79 24.12360874682406 25.52366478741855 25.591198624040658 24.761527841716735 80-81 24.145037216398126 25.56131180170364 25.581283853447783 24.712367128450445 82-83 24.145494238363465 25.477299832065555 25.679790096447185 24.6974158331238 84-85 24.023047236236692 25.643128661057514 25.517143495161065 24.81668060754473 86-87 24.057559817348373 25.55006775179739 25.65716846065822 24.735203970196025 88-89 23.935178515062113 25.43402175451646 25.62172252230066 25.009077208120768 90-91 23.884820201882572 25.503766531800732 25.67533265458803 24.936080611728666 92-93 23.966439542966704 25.427647014366162 25.814089138828837 24.791824303838293 94-95 23.925059530185617 25.329004186448557 25.84104011564242 24.904896167723404 96-97 23.959100717423034 25.068145915086877 25.89264682708456 25.080106540405527 98-99 23.86892139714632 25.299697413480743 25.76816149924656 25.063219690126378 100-101 23.823437484424403 25.19266422941816 25.911763158296523 25.07213512786091 102-103 23.597230754517323 25.103065708829007 26.043857700117172 25.255845836536494 104-105 23.59198986905192 25.32494773722267 25.848729966250783 25.23433242747463 106-107 23.561762344759117 25.294999004409117 25.859053605692004 25.28418504513976 108-109 23.484148029114856 25.274629881790293 25.924286133903706 25.316935955191145 110-111 23.424763963656567 25.400414121207614 25.917213867016088 25.257608048119728 112-113 23.470719682996112 25.40680213953399 25.92736606086236 25.195112116607532 114-115 23.446248019131914 25.509101551799347 25.81824252222692 25.226407906841818 116-117 23.25839189434365 25.43330605574973 25.92454228038076 25.383759769525867 118-119 23.371119541316954 25.373063524129964 25.77910713051079 25.47670980404229 120-121 23.241328650541348 25.465343621479136 25.903535258970876 25.389792469008636 122-123 23.20631908933206 25.48031410226404 25.809950642839198 25.5034161655647 124-125 23.197797844953925 25.55308229250531 25.743133917979392 25.505985944561377 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 663.0 1 571.5 2 401.5 3 314.5 4 266.5 5 210.0 6 209.0 7 256.5 8 330.5 9 378.0 10 386.0 11 405.5 12 430.5 13 458.5 14 530.0 15 633.5 16 719.5 17 791.5 18 919.0 19 1108.0 20 1339.0 21 1669.5 22 2135.5 23 2736.5 24 3586.5 25 4800.5 26 6429.0 27 8758.0 28 11637.0 29 15304.5 30 20201.0 31 25758.0 32 31767.5 33 36416.5 34 40645.5 35 46589.0 36 53985.5 37 62263.5 38 71046.5 39 79166.5 40 87045.5 41 96086.5 42 104925.5 43 115140.0 44 126116.0 45 136584.0 46 147841.5 47 156814.0 48 164522.0 49 171302.5 50 175891.5 51 180627.0 52 182467.5 53 183114.5 54 182414.5 55 174941.0 56 163155.5 57 149363.0 58 136833.5 59 122651.5 60 104950.5 61 88669.5 62 72125.5 63 54360.5 64 39225.0 65 28746.5 66 21353.0 67 16049.5 68 11933.0 69 8814.5 70 6577.0 71 4842.5 72 3469.5 73 2516.5 74 1856.0 75 1302.5 76 863.5 77 543.0 78 326.5 79 230.5 80 160.5 81 111.0 82 85.0 83 61.5 84 52.0 85 47.5 86 35.0 87 24.5 88 19.5 89 17.0 90 17.5 91 16.0 92 14.5 93 11.5 94 8.5 95 6.5 96 12.5 97 12.5 98 7.0 99 7.0 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03413888141040764 2 0.018318424171438245 3 0.02270879029517138 4 0.02033698330878681 5 0.013196330360416255 6 0.004743613972769133 7 0.004995933864937703 8 0.0060809094012625586 9 0.002649358867769994 10-11 0.005159941794847274 12-13 0.008465332382255553 14-15 0.0026619748623784227 16-17 0.002825982792287994 18-19 0.0 20-21 0.004516526069817419 22-23 7.317276872888555E-4 24-25 0.0012237514770175688 26-27 0.0015391513422282823 28-29 0.0034063185442757067 30-31 0.0010723595417164264 32-33 1.2615994608428544E-5 34-35 0.007355124856713842 36-37 0.009146596091110694 38-39 0.0016148473098788537 40-41 0.001463455374577711 42-43 0.003166614646715565 44-45 0.0013751434123187114 46-47 0.022670942311346094 48-49 0.0035829424687937065 50-51 0.011695027002013261 52-53 0.002132103088824424 54-55 2.018559137348567E-4 56-57 3.1539986521071363E-4 58-59 0.007821916657225697 60-61 5.803357519877131E-4 62-63 0.011392243131410976 64-65 0.011379627136802547 66-67 1.6400792990957106E-4 68-69 0.004920237897287132 70-71 0.005765509536051845 72-73 0.01280523452755497 74-75 0.002182567067258138 76-77 0.0015013033584029968 78-79 6.181837358129987E-4 80-81 0.004667918005118562 82-83 0.0017536232505715676 84-85 0.001463455374577711 86-87 0.015076113557072111 88-89 0.0 90-91 7.064956980719986E-4 92-93 0.010206339638218691 94-95 0.008011156576352126 96-97 0.0055384216331001304 98-99 0.0014886873637945683 100-101 0.017523616511107246 102-103 0.008541028349906124 104-105 0.007985924587135268 106-107 0.018974455891076533 108-109 0.010975915309332833 110-111 0.021611198764238098 112-113 0.002952142738372279 114-115 0.015883537212011536 116-117 0.0066107811748165575 118-119 0.005677197573792845 120-121 0.008705036279815696 122-123 0.009424147972496123 124-125 0.055358984341784455 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 3963223.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.693851660128765 #Duplication Level Percentage of deduplicated Percentage of total 1 73.42030926128096 37.219582665321546 2 13.157025825433543 13.339606309660226 3 5.041965845503003 7.667900059420946 4 2.538327612686624 5.147104138493779 5 1.4752131656822218 3.7392118694081753 6 0.9218079750508997 2.803799804781239 7 0.6413010556930552 2.27570144107514 8 0.46031724150085085 1.8668203165795039 9 0.34906213336034786 1.5925773607863802 >10 1.8487303997771531 16.806658904692483 >50 0.10713636043735578 3.7076216041766403 >100 0.0369961387274374 3.1292172999637735 >500 0.0013552386747336573 0.45259527020376317 >1k 4.517461918762003E-4 0.25160295543648015 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.046397843371418E-5 2 0.0 0.0 0.0 2.523198921685709E-5 7.569596765057127E-5 3 0.0 0.0 0.0 7.569596765057127E-5 7.569596765057127E-5 4 0.0 0.0 0.0 7.569596765057127E-5 7.569596765057127E-5 5 0.0 0.0 0.0 7.569596765057127E-5 7.569596765057127E-5 6 0.0 0.0 0.0 7.569596765057127E-5 1.0092795686742836E-4 7 0.0 0.0 0.0 1.0092795686742836E-4 1.0092795686742836E-4 8 0.0 0.0 0.0 1.0092795686742836E-4 1.0092795686742836E-4 9 0.0 0.0 0.0 1.2615994608428544E-4 1.5139193530114254E-4 10-11 0.0 0.0 0.0 1.640079299095711E-4 1.766239245179996E-4 12-13 0.0 0.0 0.0 2.2708790295171378E-4 4.1632782207814197E-4 14-15 0.0 0.0 0.0 2.523198921685709E-4 4.920237897287133E-4 16-17 0.0 0.0 0.0 2.523198921685709E-4 5.298717735539989E-4 18-19 0.0 0.0 0.0 2.523198921685709E-4 6.560317196382842E-4 20-21 0.0 0.0 0.0 2.9016787599385653E-4 7.44343681897284E-4 22-23 2.523198921685709E-5 0.0 0.0 4.5417580590342756E-4 8.200396495478554E-4 24-25 2.523198921685709E-5 0.0 0.0 8.200396495478554E-4 8.452716387647124E-4 26-27 2.523198921685709E-5 0.0 0.0 0.0012363674716259973 9.083516118068551E-4 28-29 2.523198921685709E-5 0.0 0.0 0.0037217184094864206 9.083516118068551E-4 30-31 2.523198921685709E-5 0.0 0.0 0.013032322430506687 9.209676064152836E-4 32-33 2.523198921685709E-5 0.0 0.0 0.03205724230001693 9.840475794574265E-4 34-35 2.523198921685709E-5 0.0 0.0 0.05530852036335074 0.0010723595417164262 36-37 2.523198921685709E-5 0.0 0.0 0.09378730391905779 0.0010849755363248547 38-39 2.523198921685709E-5 0.0 0.0 0.15618601325234538 0.001160671503975426 40-41 2.523198921685709E-5 0.0 0.0 0.2249305678736725 0.001185903493192283 42-43 2.523198921685709E-5 0.0 0.0 0.2915682513953921 0.0011985194878007116 44-45 2.523198921685709E-5 0.0 0.0 0.3690052263019265 0.0012615994608428543 46-47 2.523198921685709E-5 0.0 0.0 0.4598025394987867 0.0013751434123187114 48-49 3.7847983825285635E-5 0.0 0.0 0.5563653622316989 0.001463455374577711 50-51 5.046397843371418E-5 0.0 0.0 0.6618350771581614 0.0015139193530114253 52-53 5.046397843371418E-5 0.0 0.0 0.7653745449095345 0.001576999326053568 54-55 5.046397843371418E-5 0.0 0.0 0.8764457614421395 0.0016400792990957107 56-57 5.046397843371418E-5 0.0 0.0 1.0074502494560613 0.0016653112883125679 58-59 5.046397843371418E-5 0.0 0.0 1.147033613803715 0.001715775266746282 60-61 5.046397843371418E-5 0.0 0.0 1.3008099720858504 0.001715775266746282 62-63 5.046397843371418E-5 0.0 0.0 1.4583080487774724 0.0017662392451799963 64-65 5.046397843371418E-5 0.0 0.0 1.6186321082613822 0.0018040872290052818 66-67 5.046397843371418E-5 0.0 0.0 1.8044278608597093 0.0018419352128305672 68-69 5.046397843371418E-5 0.0 0.0 2.012162828082094 0.0018671672020474245 70-71 5.046397843371418E-5 0.0 0.0 2.232576869885949 0.0018923991912642817 72-73 5.046397843371418E-5 0.0 0.0 2.458554565312121 0.00216995107264971 74-75 6.307997304214272E-5 0.0 0.0 2.692064009519525 0.0022961110187339952 76-77 7.569596765057127E-5 0.0 0.0 2.9515245546364666 0.0022961110187339952 78-79 7.569596765057127E-5 0.0 0.0 3.2424872382906536 0.0022961110187339952 80-81 7.569596765057127E-5 0.0 0.0 3.5517304981324544 0.002333959002559281 82-83 7.569596765057127E-5 0.0 0.0 3.8773240869867784 0.0024727349432519946 84-85 7.569596765057127E-5 0.0 0.0 4.204570371134807 0.0024727349432519946 86-87 7.569596765057127E-5 0.0 0.0 4.560404499065534 0.002573662900119423 88-89 7.569596765057127E-5 0.0 0.0 4.953077331252872 0.002712438840812137 90-91 7.569596765057127E-5 0.0 0.0 5.37730276595589 0.0027250548354205654 92-93 7.569596765057127E-5 0.0 0.0 5.811103740566706 0.002914294754546994 94-95 7.569596765057127E-5 0.0 0.0 6.2510234725626095 0.0029395267437638505 96-97 7.569596765057127E-5 0.0 0.0 6.709072388810824 0.0032170786251492786 98-99 7.569596765057127E-5 0.0 0.0 7.201827906226826 0.0033558545658419927 100-101 7.569596765057127E-5 0.0 0.0 7.743255930842146 0.0033558545658419927 102-103 7.569596765057127E-5 0.0 0.0 8.303910731240709 0.003406318544275707 104-105 7.569596765057127E-5 0.0 0.0 8.857740278556115 0.003456782522709421 106-107 7.569596765057127E-5 0.0 0.0 9.423542404754919 0.0034693985173178494 108-109 7.569596765057127E-5 0.0 0.0 10.02466931585732 0.003507246501143135 110-111 7.569596765057127E-5 0.0 0.0 10.663139571000674 0.0035577104795768495 112-113 7.569596765057127E-5 0.0 0.0 11.324974648158834 0.0035829424687937065 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 7170 0.0 38.428467 1 TCAACGC 7910 0.0 33.9233 4 CAACGCA 8275 0.0 32.281967 5 TATCAAC 8690 0.0 31.085371 2 GGTATCA 4865 0.0 30.825415 1 GTACATG 15775 0.0 30.820803 1 ATCAACG 8725 0.0 30.755701 3 AACGCAG 8895 0.0 30.16524 6 TACATGG 16010 0.0 29.508638 2 ACATGGG 15540 0.0 29.366951 3 CATGGGG 11625 0.0 29.121746 4 ACGCAGA 10035 0.0 26.323387 7 CGCAGAG 10720 0.0 24.530344 8 GCAGAGT 12090 0.0 21.012499 9 ATGGGGA 6265 0.0 20.32237 5 ATGGGGG 6305 0.0 19.62727 5 AGAGTAC 10280 0.0 19.591196 10-11 TATACTG 1870 0.0 18.771202 5 GAGTACA 11240 0.0 17.57774 1 CAGAGTA 11270 0.0 17.183928 10-11 >>END_MODULE