##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921007_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3963223 Sequences flagged as poor quality 0 Sequence length 125 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.84931683127596 31.0 30.0 34.0 26.0 34.0 2 29.883525352976605 31.0 30.0 34.0 26.0 34.0 3 30.02012200676066 31.0 30.0 34.0 26.0 34.0 4 33.573734054329016 35.0 33.0 37.0 28.0 37.0 5 33.074200215329796 35.0 33.0 37.0 26.0 37.0 6 32.87284641818035 35.0 33.0 37.0 26.0 37.0 7 32.70248280250695 35.0 33.0 37.0 25.0 37.0 8 32.61777422062801 35.0 33.0 37.0 25.0 37.0 9 33.930866620424844 37.0 33.0 39.0 25.0 39.0 10-11 33.824946009851075 37.0 33.0 39.0 25.0 39.0 12-13 33.70595964446109 37.0 33.0 39.0 24.0 39.0 14-15 34.572323712291734 38.0 33.0 41.0 23.0 41.0 16-17 34.546836123024114 38.0 33.0 41.0 23.5 41.0 18-19 34.565624871474554 38.5 33.5 41.0 23.0 41.0 20-21 34.5288941601318 39.0 33.0 41.0 22.5 41.0 22-23 34.49923862472538 39.0 33.0 41.0 23.0 41.0 24-25 34.47114482329155 38.5 33.0 41.0 23.0 41.0 26-27 34.325746999348766 38.0 33.0 41.0 21.5 41.0 28-29 34.202860903865364 38.0 33.0 40.0 20.5 41.0 30-31 34.04816420877654 38.0 33.0 40.0 19.0 41.0 32-33 33.923191427784914 38.0 33.0 40.0 18.5 41.0 34-35 33.806684609975264 38.0 33.0 40.0 18.0 41.0 36-37 33.66808642864659 38.0 33.0 40.0 17.0 41.0 38-39 33.52762713579327 38.0 32.0 40.0 16.0 41.0 40-41 33.33533200125252 38.0 32.0 40.0 15.0 41.0 42-43 33.18702467663313 38.0 32.0 40.0 14.5 41.0 44-45 32.96180015608508 38.0 32.0 40.0 10.0 41.0 46-47 32.826618638416264 38.0 31.5 40.0 9.0 41.0 48-49 32.61706002917323 38.0 31.0 40.0 8.0 41.0 50-51 32.401703865767836 37.0 31.0 40.0 7.0 41.0 52-53 32.14470192568019 37.0 31.0 40.0 4.0 41.0 54-55 31.943849235836588 37.0 30.5 40.0 2.0 41.0 56-57 31.793404635570596 36.0 30.5 40.0 2.0 41.0 58-59 31.705399115820633 36.0 31.0 40.0 2.0 41.0 60-61 31.413652726581372 36.0 30.0 39.0 2.0 41.0 62-63 31.134371949294803 35.0 30.0 39.0 2.0 41.0 64-65 30.85186854234546 35.0 29.5 39.0 2.0 41.0 66-67 30.529837079568825 35.0 29.0 38.5 2.0 40.0 68-69 30.210390507927514 35.0 29.0 37.5 2.0 40.0 70-71 29.854640781000718 35.0 29.0 37.0 2.0 39.5 72-73 29.57604429526171 34.0 29.0 36.5 2.0 39.0 74-75 29.324641585901173 34.0 29.0 36.0 2.0 39.0 76-77 29.01299926852463 34.0 29.0 35.5 2.0 37.5 78-79 28.7135419833807 34.0 28.0 35.0 2.0 37.0 80-81 28.473882494121575 34.0 28.0 35.0 2.0 37.0 82-83 28.244027651232344 34.0 27.5 35.0 2.0 36.0 84-85 28.071789551080016 34.0 27.0 35.0 2.0 36.0 86-87 27.86486654927063 34.0 27.0 35.0 2.0 35.5 88-89 27.755203277736328 34.0 27.0 35.0 2.0 35.0 90-91 27.580713853346126 34.0 26.0 35.0 2.0 35.0 92-93 27.742552967622565 34.0 27.0 35.0 2.0 35.0 94-95 27.698443287193278 34.0 27.0 35.0 2.0 35.0 96-97 27.644323950481716 34.0 27.0 35.0 2.0 35.0 98-99 27.59890876693035 34.0 27.0 35.0 2.0 35.0 100-101 27.469240438905405 34.0 27.0 35.0 2.0 35.0 102-103 26.168990490820224 31.5 24.5 34.0 2.0 35.0 104-105 27.240532516086027 33.5 26.0 35.0 2.0 35.0 106-107 27.442635577155258 34.0 27.0 35.0 2.0 35.0 108-109 27.42751063969905 34.0 27.0 35.0 2.0 35.0 110-111 27.363765046781367 34.0 27.0 35.0 2.0 35.0 112-113 27.26073513905223 34.0 27.0 35.0 2.0 35.0 114-115 27.170220928774384 34.0 27.0 35.0 2.0 35.0 116-117 27.041424618296777 34.0 26.0 35.0 2.0 35.0 118-119 26.91279799294665 34.0 25.0 35.0 2.0 35.0 120-121 26.77310146312736 34.0 25.0 35.0 2.0 35.0 122-123 26.5390509189112 34.0 25.0 35.0 2.0 35.0 124-125 25.419413189719577 32.5 21.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 142144.0 3 44788.0 4 22968.0 5 17554.0 6 19110.0 7 22571.0 8 25142.0 9 26732.0 10 28082.0 11 28598.0 12 29077.0 13 30381.0 14 31939.0 15 26856.0 16 21757.0 17 20105.0 18 18189.0 19 17406.0 20 17635.0 21 18827.0 22 22165.0 23 28978.0 24 39322.0 25 51547.0 26 63242.0 27 74830.0 28 87474.0 29 103289.0 30 121576.0 31 145438.0 32 175054.0 33 216949.0 34 277401.0 35 383420.0 36 613422.0 37 758475.0 38 190501.0 39 279.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.8812551672778 18.6546333520565 12.96576185397194 25.498349626693763 2 16.812869333521732 19.92690287190719 37.056938549966944 26.203289244604132 3 19.739029372758086 23.376080712003247 28.899697410732127 27.98519250450654 4 14.09360858871155 15.658417022205425 34.015206481954934 36.232767907128085 5 14.54623869306407 36.923574652274816 33.62723880107363 14.90294785358748 6 35.22065916530557 34.66874315403864 15.787200080341085 14.323397600314703 7 29.87197813774683 31.126509117473024 20.006131726131375 18.995381018648775 8 27.5440441756508 35.12720788669214 18.52918925002637 18.799558687630686 9 26.67754634759218 15.15163828712161 18.41493682936888 39.75587853591733 10-11 26.42105350825345 25.221636597749512 26.635093588589783 21.722216305407258 12-13 26.683133140831888 22.222042757226724 27.119611638871394 23.975212463069994 14-15 23.73650187853997 23.735290365073176 24.12871674348209 28.399491012904765 16-17 24.214041352202013 26.89637363638727 24.877960494513996 24.01162451689672 18-19 24.24767169457873 25.958013322416644 26.399195157109578 23.395119825895044 20-21 24.950130025358984 25.101014460273618 26.264680852352573 23.68417466201483 22-23 24.58330383590267 24.79861299610735 26.269711381995325 24.348371785994658 24-25 24.2987181048369 25.1547870900658 26.28540638354389 24.261088421553403 26-27 24.120648544097044 25.383042697872376 26.29073590635057 24.205572851680014 28-29 24.165309412857493 25.414618062027056 26.39688831240742 24.023184212708035 30-31 24.372886955536327 25.32454331234007 26.178815537898732 24.12375419422487 32-33 24.195406077402797 25.325809509159058 26.076055050143616 24.40272936329453 34-35 24.23933925281919 25.379723041358282 26.269829160755826 24.1111085450667 36-37 24.44162984920321 25.1784502742127 26.19753511457164 24.182384762012454 38-39 24.369997652635483 25.312060657918316 26.136755437430114 24.181186252016083 40-41 24.35643389417237 25.288769105242665 26.22157127901716 24.133225721567808 42-43 24.4276696413799 25.183065828734208 26.061900436773367 24.327364093112525 44-45 24.3048329755366 25.25721044240638 26.08083913609346 24.357117445963564 46-47 24.442805089377106 25.33113640121315 25.95204949534088 24.274009014068866 48-49 24.41530136021626 25.517381943375224 25.719243690479498 24.34807300592902 50-51 24.3623646825534 25.68623135753183 25.70300210208475 24.24840185783002 52-53 24.532918688401452 25.46961794512997 25.68058761052655 24.316875755942032 54-55 24.366245406699765 25.465330955508676 25.67419620637603 24.49422743141553 56-57 24.31227960187252 25.652878186276734 25.676956034958813 24.35788617689193 58-59 24.289992229966735 25.466186221082115 25.754435904040278 24.489385644910868 60-61 24.299526523840857 25.560997873124848 25.826557502810527 24.31291810022377 62-63 24.168983854348706 25.606580598433364 25.802545946458356 24.421889600759574 64-65 24.046223104963897 25.56678574507393 25.822680416535032 24.564310733427146 66-67 24.133447479032164 25.65440988730952 25.712757473078767 24.49938516057955 68-69 24.25788824422086 25.451380146959067 25.779725453449814 24.511006155370254 70-71 24.03546955447872 25.440709593022703 25.855707419086343 24.668113433412234 72-73 24.192448302732274 25.48273122822677 25.70385551395872 24.620964955082236 74-75 24.061873417632064 25.641506141067183 25.64786621434431 24.648754226956438 76-77 24.239884038205204 25.356875653890835 25.69307854614679 24.710161761757163 78-79 24.138909312472755 25.47810747457737 25.693709847465485 24.68927336548439 80-81 24.150663438994872 25.570583278891718 25.636089890062213 24.6426633920512 82-83 24.114544293641547 25.429515228074994 25.764035231311023 24.69190524697244 84-85 23.997117857422275 25.58822712898724 25.571469312248098 24.843185701342392 86-87 24.05668306822777 25.494116589908977 25.70905579206314 24.740144549800117 88-89 23.926563248154704 25.413792259185207 25.633261489447683 25.026383003212405 90-91 23.848712150335242 25.485358902447118 25.681307217324427 24.98462172989321 92-93 23.873781558459324 25.467658691749467 25.82043602293816 24.838123726853052 94-95 23.84967619075501 25.34653917630641 25.82617385189082 24.97761078104776 96-97 23.86706826650448 25.10909189561601 25.889662673801922 25.13417716407759 98-99 23.746566597100532 25.286717377845562 25.79014011741525 25.176575907638654 100-101 23.698992841924184 25.252849525949728 25.90702527208108 25.141132360045006 102-103 23.51647885692277 25.130543904118973 25.98531022996272 25.367667008995536 104-105 23.540674083005705 25.28375983276957 25.737762945940982 25.437803138283744 106-107 23.493664484483315 25.260752257060133 25.804028974253534 25.441554284203022 108-109 23.396528589032982 25.260676328795018 25.852452036993995 25.490343045178008 110-111 23.368042511624232 25.35749082383749 25.833653117775274 25.440813546763003 112-113 23.342663745066773 25.39909338882455 25.82500582309549 25.43323704301318 114-115 23.323188908504218 25.54422868702357 25.66244641938059 25.47013598509162 116-117 23.13153568834719 25.42943311396923 25.803890613036778 25.6351405846468 118-119 23.234994092075308 25.41675630015664 25.664706190356927 25.683543417411126 120-121 23.107322663932024 25.50607067805472 25.755402999356043 25.631203658657213 122-123 23.04003235886241 25.52245974792436 25.64928105365139 25.78822683956184 124-125 23.026260723142293 25.615721817345616 25.61000289228638 25.748014567225713 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 43.0 1 59.0 2 153.5 3 289.0 4 289.0 5 229.0 6 292.5 7 591.0 8 929.5 9 980.5 10 800.5 11 671.0 12 721.0 13 766.0 14 867.5 15 1031.0 16 1141.0 17 1290.0 18 1512.0 19 1773.0 20 2008.5 21 2342.5 22 2899.5 23 3616.0 24 4492.0 25 5711.0 26 7382.5 27 9653.0 28 12452.5 29 16234.0 30 21078.5 31 26214.5 32 32193.5 33 36759.5 34 40751.5 35 46550.5 36 53724.0 37 61962.0 38 70842.5 39 78547.5 40 86323.0 41 95832.5 42 104393.5 43 114606.0 44 125830.5 45 136653.0 46 148100.0 47 157083.5 48 165009.5 49 172039.5 50 177463.5 51 182204.5 52 183888.0 53 184220.0 54 182842.5 55 174486.0 56 162440.0 57 149132.0 58 135878.0 59 121328.5 60 104013.0 61 87566.0 62 70462.5 63 52532.0 64 37636.5 65 27381.0 66 20162.5 67 15107.5 68 11067.0 69 7981.5 70 5838.0 71 4218.0 72 2991.5 73 2150.0 74 1530.0 75 1094.5 76 756.0 77 450.0 78 254.0 79 148.5 80 90.5 81 59.0 82 35.5 83 21.5 84 12.0 85 10.5 86 8.5 87 6.0 88 6.5 89 7.5 90 5.5 91 3.5 92 4.0 93 5.5 94 6.0 95 7.5 96 9.0 97 5.0 98 1.0 99 1.0 100 0.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.05041351445528046 2 7.569596765057126E-5 3 0.002397038975601423 4 0.12391429904398515 5 0.01541674541149968 6 0.0030278387060228506 7 0.0057528935414434155 8 0.012540298640777972 9 0.027679492170892227 10-11 0.022229382500051093 12-13 0.020904703066166097 14-15 0.03119935466664379 16-17 0.04027025479010391 18-19 0.043007925620132906 20-21 0.023188198090291663 22-23 0.02557262107128466 24-25 0.023352206020201237 26-27 0.021977062607882524 28-29 0.02198967860249095 30-31 0.027212700370380368 32-33 0.026581900639958946 34-35 0.03087133880682465 36-37 0.03368470560450421 38-39 0.033634241626070496 40-41 0.036599000359051205 42-43 0.033520697674594646 44-45 0.03137597859116179 46-47 0.04132999833721191 48-49 0.03413888141040764 50-51 0.024374101583483947 52-53 0.03227171420836021 54-55 0.033773017566763215 56-57 0.02712438840812137 58-59 0.030442394990138077 60-61 0.044849860832963474 62-63 0.052066209748984606 64-65 0.046111460293806326 66-67 0.04086320653670005 68-69 0.031174122677426933 70-71 0.038239079658146914 72-73 0.041632782207814197 74-75 0.025345533168332945 76-77 0.022292462473093237 78-79 0.03280158598191421 80-81 0.02592586892032066 82-83 0.0397782310003752 84-85 0.02253216637065338 86-87 0.03545094484968421 88-89 0.03512292898986506 90-91 0.036939632213478776 92-93 0.02755333222480794 94-95 0.023629757901586664 96-97 0.01862120804204053 98-99 0.02639266072083251 100-101 0.024853509378604234 102-103 0.02891585964251822 104-105 0.02587540494188694 106-107 0.015177041513939537 108-109 0.01872213599890796 110-111 0.023175582095683236 112-113 0.013978522026138827 114-115 0.015631217319842967 116-117 0.014054217993789397 118-119 0.008213012490086982 120-121 0.006030445422828845 122-123 0.004201126204606705 124-125 0.06783620300952029 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 3963223.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.5626854268151 #Duplication Level Percentage of deduplicated Percentage of total 1 72.75048367051127 36.05709336810199 2 13.330972159068027 13.214375591070377 3 5.231015937342974 7.777895920955584 4 2.5905546172073755 5.135793742945303 5 1.529416617854141 3.790099735862414 6 0.9678373076719765 2.87811696146891 7 0.6526190949925521 2.2641888436054036 8 0.496233044394008 1.9675713822152794 9 0.35681050896500166 1.5916038311532752 >10 1.9373496802055197 17.22015393284104 >50 0.11420691780284944 3.8292492516720014 >100 0.040554334402297804 3.388913567644547 >500 0.0014851889194030144 0.49592800051177466 >1k 4.6092066259500547E-4 0.38901586995198245 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.2615994608428544E-4 2 0.0 0.0 0.0 0.0 1.2615994608428544E-4 3 0.0 0.0 0.0 0.0 1.2615994608428544E-4 4 0.0 0.0 0.0 2.523198921685709E-5 1.2615994608428544E-4 5 0.0 0.0 0.0 2.523198921685709E-5 1.5139193530114254E-4 6 0.0 0.0 0.0 2.523198921685709E-5 2.2708790295171378E-4 7 0.0 0.0 0.0 2.523198921685709E-5 2.523198921685709E-4 8 0.0 0.0 0.0 2.523198921685709E-5 2.523198921685709E-4 9 0.0 0.0 0.0 5.046397843371418E-5 2.77551881385428E-4 10-11 0.0 0.0 0.0 5.046397843371418E-5 3.280158598191421E-4 12-13 0.0 0.0 0.0 7.569596765057127E-5 5.929517465961417E-4 14-15 0.0 0.0 0.0 1.0092795686742836E-4 7.443436818972841E-4 16-17 0.0 0.0 0.0 1.0092795686742836E-4 8.831196225899981E-4 18-19 0.0 0.0 0.0 1.0092795686742836E-4 0.0010092795686742835 20-21 0.0 0.0 0.0 1.38775940692714E-4 0.0011480555093669976 22-23 0.0 0.0 0.0 2.6493588677699943E-4 0.0012868314500597115 24-25 0.0 0.0 0.0 5.55103762770856E-4 0.00129944744466814 26-27 0.0 0.0 0.0 9.209676064152836E-4 0.0014256073907524254 28-29 0.0 0.0 0.0 0.0033306225766251358 0.001463455374577711 30-31 2.523198921685709E-5 0.0 0.0 0.012300594743217829 0.001463455374577711 32-33 2.523198921685709E-5 0.0 0.0 0.03102273074212579 0.0014886873637945683 34-35 2.523198921685709E-5 0.0 0.0 0.05379460101033931 0.0015643833314451395 36-37 2.523198921685709E-5 0.0 0.0 0.09122625701354681 0.001576999326053568 38-39 5.046397843371418E-5 0.0 0.0 0.15192180707469652 0.0015896153206619965 40-41 5.046397843371418E-5 0.0 0.0 0.21959400215430724 0.0015896153206619965 42-43 5.046397843371418E-5 0.0 0.0 0.28460422237153954 0.0016148473098788535 44-45 5.046397843371418E-5 0.0 0.0 0.3605272779250625 0.0017031592721378536 46-47 5.046397843371418E-5 0.0 0.0 0.44968451182282704 0.001741007255963139 48-49 5.046397843371418E-5 0.0 0.0 0.5446072552566434 0.0017914712343968533 50-51 5.046397843371418E-5 0.0 0.0 0.6480710270403659 0.0018419352128305675 52-53 5.046397843371418E-5 0.0 0.0 0.7495414716759566 0.0019176311804811387 54-55 5.046397843371418E-5 0.0 0.0 0.8591996968124176 0.001968095158914853 56-57 5.046397843371418E-5 0.0 0.0 0.98915705727384 0.0020311751319569958 58-59 5.046397843371418E-5 0.0 0.0 1.127112958317006 0.0021068710996075667 60-61 5.046397843371418E-5 0.0 0.0 1.279097845364745 0.0021447190834328524 62-63 5.046397843371418E-5 0.0 0.0 1.4342998110376328 0.0023465749971677092 64-65 5.046397843371418E-5 0.0 0.0 1.5929585592332303 0.0023591909917761375 66-67 5.046397843371418E-5 0.0 0.0 1.7758652490662272 0.002371806986384566 68-69 5.046397843371418E-5 0.0 0.0 1.9811148653507513 0.002371806986384566 70-71 5.046397843371418E-5 0.0 0.0 2.198753388340752 0.002409654970209852 72-73 5.046397843371418E-5 0.0 0.0 2.4208453574275284 0.002573662900119423 74-75 5.046397843371418E-5 0.0 0.0 2.6515666668264695 0.002788134808462708 76-77 5.046397843371418E-5 0.0 0.0 2.9086427889624176 0.002901678759938565 78-79 5.046397843371418E-5 0.0 0.0 3.1958459062232936 0.002964758732980708 80-81 5.046397843371418E-5 0.0 0.0 3.503587862706691 0.003027838706022851 82-83 5.046397843371418E-5 0.0 0.0 3.826267156806468 0.003153998652107136 84-85 7.569596765057127E-5 0.0 0.0 4.148858138943986 0.003153998652107136 86-87 7.569596765057127E-5 0.0 0.0 4.4972488300557405 0.0033306225766251358 88-89 7.569596765057127E-5 0.0 0.0 4.884004760771726 0.003507246501143135 90-91 7.569596765057127E-5 0.0 0.0 5.302527765911734 0.003507246501143135 92-93 7.569596765057127E-5 0.0 0.0 5.733199973859659 0.003658638436444278 94-95 7.569596765057127E-5 0.0 0.0 6.1675434362386365 0.003683870425661135 96-97 7.569596765057127E-5 0.0 0.0 6.622198649937185 0.0041128142423477055 98-99 7.569596765057127E-5 0.0 0.0 7.11203987259864 0.004466062091383704 100-101 7.569596765057127E-5 0.0 0.0 7.6514241060873935 0.004466062091383704 102-103 7.569596765057127E-5 0.0 0.0 8.209530475575056 0.00450391007520899 104-105 7.569596765057127E-5 0.0 0.0 8.761177455823201 0.004541758059034276 106-107 7.569596765057127E-5 0.0 0.0 9.325932454469505 0.004554374053642705 108-109 7.569596765057127E-5 0.0 0.0 9.925633758181156 0.004604838032076419 110-111 7.569596765057127E-5 0.0 0.0 10.564760045044148 0.0046931499943354184 112-113 7.569596765057127E-5 0.0 0.0 11.226620354191525 0.0046931499943354184 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 5605 0.0 44.01307 1 GTATCAA 8540 0.0 43.39997 1 TCAACGC 10575 0.0 34.136375 4 TATCAAC 11180 0.0 32.65589 2 CAACGCA 11025 0.0 32.597507 5 ATCAACG 11400 0.0 31.874996 3 AACGCAG 11550 0.0 31.162596 6 GTACATG 14955 0.0 26.576412 1 ACGCAGA 13735 0.0 26.075884 7 TACATGG 15690 0.0 24.901402 2 ACATGGG 15035 0.0 24.881777 3 CGCAGAG 14480 0.0 24.653032 8 CATGGGG 11170 0.0 24.371834 4 GCAGAGT 16115 0.0 21.118296 9 GGACCGT 765 0.0 20.219584 6 AGAGTAC 14275 0.0 20.193846 10-11 GTATATA 1510 0.0 18.941797 1 CAGAGTA 15430 0.0 18.701532 10-11 TATACCG 385 5.0276867E-9 18.545841 5 GAGTACT 7720 0.0 18.189728 12-13 >>END_MODULE