##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921001_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3454970 Sequences flagged as poor quality 0 Sequence length 125 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.637563567845742 31.0 30.0 34.0 26.0 34.0 2 29.75110232505637 31.0 30.0 34.0 26.0 34.0 3 29.874091526120342 31.0 30.0 34.0 26.0 34.0 4 33.379777827303855 35.0 33.0 37.0 28.0 37.0 5 32.84868551680622 35.0 33.0 37.0 26.0 37.0 6 32.619346332963815 35.0 33.0 37.0 25.0 37.0 7 32.44928928471159 35.0 33.0 37.0 24.0 37.0 8 32.382257154186576 35.0 33.0 37.0 23.0 37.0 9 33.67301423746082 37.0 33.0 39.0 23.0 39.0 10-11 33.55038480797228 37.0 33.0 39.0 22.5 39.0 12-13 33.431919814064955 37.0 33.0 39.0 21.5 39.0 14-15 34.30076310358701 38.0 33.0 41.0 19.0 41.0 16-17 34.28633707383855 38.0 33.0 41.0 19.0 41.0 18-19 34.30677241770551 38.5 33.0 41.0 19.0 41.0 20-21 34.274687334477576 39.0 33.0 41.0 19.0 41.0 22-23 34.22424391528725 39.0 33.0 41.0 19.0 41.0 24-25 34.18820308135816 38.5 33.0 41.0 19.0 41.0 26-27 34.04662819069341 38.0 33.0 41.0 18.0 41.0 28-29 33.92870140695867 38.0 33.0 40.0 17.5 41.0 30-31 33.77027861312834 38.0 33.0 40.0 16.5 41.0 32-33 33.652812614870754 38.0 33.0 40.0 16.0 41.0 34-35 33.53065844276506 38.0 32.0 40.0 16.0 41.0 36-37 33.390125384590895 38.0 32.0 40.0 15.0 41.0 38-39 33.258813680003016 38.0 32.0 40.0 13.0 41.0 40-41 33.08863694909073 38.0 32.0 40.0 9.0 41.0 42-43 32.941125393274035 38.0 32.0 40.0 9.0 41.0 44-45 32.73326859567521 38.0 31.0 40.0 8.0 41.0 46-47 32.60923293111084 38.0 31.0 40.0 7.5 41.0 48-49 32.41668350231695 38.0 31.0 40.0 2.0 41.0 50-51 32.22566910855956 37.5 31.0 40.0 2.0 41.0 52-53 31.99381022121755 37.0 30.5 40.0 2.0 41.0 54-55 31.819041699349054 37.0 30.0 40.0 2.0 41.0 56-57 31.693187784553846 37.0 30.0 40.0 2.0 41.0 58-59 31.64319183668744 37.0 30.0 40.0 2.0 41.0 60-61 31.382812730646 36.0 30.0 40.0 2.0 41.0 62-63 31.142088353878613 36.0 30.0 39.0 2.0 41.0 64-65 30.883919107835958 35.0 29.0 39.0 2.0 41.0 66-67 30.581687684697698 35.0 29.0 39.0 2.0 41.0 68-69 30.283720408570844 35.0 29.0 38.5 2.0 40.0 70-71 29.938753737369645 35.0 29.0 37.5 2.0 40.0 72-73 29.655125370118988 35.0 29.0 37.0 2.0 39.5 74-75 29.38965577125127 34.5 29.0 37.0 2.0 39.0 76-77 29.052846479130064 34.0 28.0 36.0 2.0 39.0 78-79 28.723320462985207 34.0 28.0 36.0 2.0 38.0 80-81 28.45153416672214 34.0 28.0 35.0 2.0 37.0 82-83 28.192088064440505 34.0 27.0 35.0 2.0 37.0 84-85 27.98533619684107 34.0 27.0 35.0 2.0 36.0 86-87 27.74422918288726 34.0 26.0 35.0 2.0 36.0 88-89 27.606534789014084 34.0 26.0 35.0 2.0 36.0 90-91 27.418413039765902 34.0 26.0 35.0 2.0 35.0 92-93 27.55046281154395 34.0 27.0 35.0 2.0 35.0 94-95 27.48929353945186 34.0 26.5 35.0 2.0 35.0 96-97 27.41803980931817 34.0 27.0 35.0 2.0 35.0 98-99 27.364997670023186 34.0 26.5 35.0 2.0 35.0 100-101 27.231624442469833 34.0 26.0 35.0 2.0 35.0 102-103 25.95002431280156 31.5 24.0 34.0 2.0 35.0 104-105 26.998395355097152 33.5 25.0 35.0 2.0 35.0 106-107 27.19966714616914 34.0 26.0 35.0 2.0 35.0 108-109 27.178737442003836 34.0 26.0 35.0 2.0 35.0 110-111 27.12012217182783 34.0 26.0 35.0 2.0 35.0 112-113 27.018153269058775 34.0 25.0 35.0 2.0 35.0 114-115 26.9355194111671 34.0 25.0 35.0 2.0 35.0 116-117 26.804752718547483 34.0 25.0 35.0 2.0 35.0 118-119 26.67338457352741 34.0 25.0 35.0 2.0 35.0 120-121 26.535215356428566 34.0 25.0 35.0 2.0 35.0 122-123 26.29986816093917 34.0 25.0 35.0 2.0 35.0 124-125 25.19498837905973 32.5 21.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 145429.0 3 43921.0 4 20938.0 5 15748.0 6 16696.0 7 19293.0 8 21636.0 9 23378.0 10 24277.0 11 25095.0 12 25303.0 13 26267.0 14 27782.0 15 23992.0 16 19822.0 17 17603.0 18 16329.0 19 15607.0 20 15389.0 21 16282.0 22 19026.0 23 24685.0 24 33656.0 25 43559.0 26 53436.0 27 63010.0 28 74485.0 29 87633.0 30 102468.0 31 120788.0 32 147427.0 33 181527.0 34 232253.0 35 315616.0 36 494121.0 37 680903.0 38 219196.0 39 394.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.84094197872755 19.619807604485 13.789069208001045 25.750181208786405 2 15.622865392675129 20.571478520206266 38.955498285367625 24.850157801750985 3 18.847470146782662 24.644736872573013 29.24856956951626 27.259223411128065 4 13.296300793558563 17.088098244422298 35.88094332126124 33.734657640757895 5 14.040754366549614 37.258000504269646 34.34849201085772 14.352753118323022 6 32.86041813861714 36.40273780617173 17.05232854484508 13.684515510366053 7 28.483149840048817 31.740035035272623 21.234402877847774 18.54241224683079 8 25.807796225720374 36.3919776440191 19.52637115351327 18.273854976747256 9 26.06138227363499 16.273621093259205 19.469420320986895 38.19557631211891 10-11 25.342455541970445 26.250700746174356 27.552000685511775 20.854843026343424 12-13 25.939191628354813 23.218907764088346 27.815360271335056 23.02654033622179 14-15 22.88992665057911 24.72985786106893 25.233822088207493 27.14639340014447 16-17 23.245076035545747 27.77645956354932 25.835046086908807 23.14341831399612 18-19 23.150856060291293 26.862050389734254 27.481096719619064 22.50599683035539 20-21 23.95316106774307 26.169030031522304 27.158949464864797 22.718859435869827 22-23 23.54902158330033 25.953403324462847 27.022189527270367 23.47538556496645 24-25 23.33306071933907 26.20668242037802 27.15540807058049 23.30484878970243 26-27 23.23134902817017 26.465358541648754 27.004085104264103 23.299207325916978 28-29 23.228694423697117 26.47328226595566 27.195882765049532 23.10214054529769 30-31 23.44107158754273 26.303053375997266 27.01397096661892 23.241904069841084 32-33 23.28950050201094 26.283312507889157 26.938923160480215 23.488263829619687 34-35 23.43514175423013 26.376669057151897 26.9674817767723 23.22070741184567 36-37 23.538001388867375 26.159072362827633 26.973718211056596 23.329208037248396 38-39 23.398525999134304 26.354924121238092 26.981425157034224 23.265124722593384 40-41 23.535156546889947 26.242354919915854 26.93084824468078 23.291640288513417 42-43 23.58473303571713 26.124160330572295 26.8213599221052 23.46974671160538 44-45 23.470601979121337 26.35794249899463 26.695468414922363 23.475987106961668 46-47 23.52302473138501 26.36675253138782 26.539698064837058 23.570524672390114 48-49 23.520361514083426 26.39891856147135 26.55727495557219 23.52344496887303 50-51 23.45600935218516 26.548362180624785 26.455546722421563 23.54008174476849 52-53 23.649386830111084 26.417210303193926 26.358596719289572 23.57480614740542 54-55 23.49886396290562 26.386070209191516 26.427009526208472 23.688056301694395 56-57 23.45418488173475 26.576792796965925 26.39702093164645 23.57200138965288 58-59 23.386999411988317 26.36159736515178 26.574451225284907 23.676951997574992 60-61 23.552393538165038 26.37859216036914 26.559199127179735 23.509815174286086 62-63 23.415847533333622 26.461734926571197 26.521517543135715 23.60089999695947 64-65 23.31113651153986 26.270014600822773 26.545323719134316 23.87352516850305 66-67 23.314223337937104 26.548025445248413 26.406973411047314 23.730777805767165 68-69 23.3618199386936 26.328253419080262 26.55464557012417 23.75528107210197 70-71 23.306033051904894 26.228653815223137 26.523463847045075 23.941849285826898 72-73 23.435806806499432 26.311031696980464 26.437029724270918 23.81613177224919 74-75 23.340478407285428 26.37196710718306 26.332058337154844 23.955496148376668 76-77 23.36994235215817 26.16589018336547 26.466852852819816 23.99731461165654 78-79 23.451966233377075 26.201949766973243 26.458130820692805 23.887953178956877 80-81 23.24457224664151 26.398716316517433 26.386441129404066 23.970270307436984 82-83 23.35832256727028 26.36505089824 26.36923475151965 23.907391782970066 84-85 23.335417256826176 26.251255167047045 26.28046580104953 24.13286177507725 86-87 23.290483221865138 26.16131040273314 26.4588146732679 24.08939170213382 88-89 23.237621383116096 26.115392855695234 26.480077824166028 24.166907937022646 90-91 23.109840024968776 26.2843110743348 26.497402656811953 24.108446243884472 92-93 23.16615579480684 26.197962544105675 26.499419162218402 24.136462498869086 94-95 23.055023560185553 26.202837470545244 26.4952318723794 24.246907096889807 96-97 23.100814959485067 26.112385754340877 26.52353479032991 24.263264495844144 98-99 23.009353121369394 26.125279772887094 26.383129698527075 24.482237407216438 100-101 22.911109036310695 26.12604123014434 26.54788193034606 24.41496780319891 102-103 22.913591198353483 26.04103667516772 26.49926275614266 24.546109370336133 104-105 22.925709167269922 26.049682782384043 26.4007941694897 24.62381388085634 106-107 22.774181212744647 26.144844618692943 26.41821636910151 24.6627577994609 108-109 22.860050970139177 26.094166659067607 26.361885093267944 24.683897277525272 110-111 22.687828117588428 26.219415196010388 26.39733998674394 24.69541669965725 112-113 22.63142278187871 26.20176581270806 26.411029092488057 24.75578231292517 114-115 22.504418891840928 26.321238528684148 26.366672205358483 24.807670374116437 116-117 22.523379473768614 26.215839741834333 26.360201081132406 24.900579703264643 118-119 22.49358773778052 26.244424638949333 26.18145262017727 25.08053500309288 120-121 22.420869757515604 26.314230230066816 26.32236389071486 24.94253612170272 122-123 22.34257700519157 26.33356701570438 26.248613536056165 25.07524244304788 124-125 22.32950438344485 26.397686412247694 26.06897148907382 25.20383771523363 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 48.0 1 51.5 2 116.5 3 193.5 4 192.0 5 166.0 6 186.5 7 329.0 8 483.0 9 520.0 10 474.5 11 419.5 12 451.0 13 541.5 14 636.0 15 741.5 16 877.5 17 1034.5 18 1215.5 19 1437.5 20 1741.0 21 2218.0 22 2735.5 23 3453.5 24 4513.0 25 6007.5 26 8160.5 27 11080.5 28 14582.0 29 18855.5 30 24434.5 31 31627.5 32 39760.0 33 47231.5 34 54048.0 35 61654.0 36 70463.0 37 78693.0 38 85059.5 39 90529.0 40 97705.0 41 106059.0 42 113941.5 43 121862.5 44 127572.0 45 132274.0 46 136908.5 47 140981.0 48 146233.5 49 149200.0 50 147758.0 51 144289.0 52 140300.5 53 136588.5 54 130995.5 55 121744.5 56 110264.0 57 99164.0 58 89566.5 59 78983.5 60 67250.0 61 55538.5 62 44803.0 63 34544.5 64 25901.5 65 20079.5 66 15594.0 67 12249.0 68 9380.0 69 6982.0 70 5405.0 71 4429.0 72 3714.0 73 2973.5 74 2260.0 75 1668.5 76 1103.0 77 652.0 78 389.0 79 242.5 80 161.0 81 106.5 82 61.5 83 36.5 84 24.0 85 19.5 86 14.0 87 9.0 88 4.5 89 3.0 90 2.0 91 4.0 92 6.5 93 6.0 94 4.5 95 6.5 96 7.5 97 4.0 98 1.0 99 0.5 100 0.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.05125948995215588 2 5.788762275794001E-5 3 0.0019102915510120202 4 0.12477677085473969 5 0.013574647536736931 6 0.0025181115899703906 7 0.00480467268890902 8 0.009377794886786282 9 0.021649970911469564 10-11 0.017843859715135007 12-13 0.018610870716677715 14-15 0.027641339866916352 16-17 0.0354127532221698 18-19 0.03677311235698139 20-21 0.02169338662853802 22-23 0.023676037707997463 24-25 0.02192493711956978 26-27 0.020636937513205614 28-29 0.020550106079068705 30-31 0.02438516108678223 32-33 0.024949565408672145 34-35 0.028914867567591037 36-37 0.031158012949461213 38-39 0.03198291157376185 40-41 0.03463127031493761 42-43 0.03128826010066658 44-45 0.029320080926896617 46-47 0.03709149428215006 48-49 0.030448889570676447 50-51 0.023270824348691883 52-53 0.02872673279362773 54-55 0.031186956760840177 56-57 0.025181115899703906 58-59 0.027699227489674294 60-61 0.03872681962506187 62-63 0.047033693490826256 64-65 0.040448976402110585 66-67 0.037048078565081605 68-69 0.02916088996431228 70-71 0.03532592178803289 72-73 0.03891495439902517 74-75 0.024370689181092742 76-77 0.020868488004237375 78-79 0.02800313750915348 80-81 0.02452988014367708 82-83 0.03519567463682753 84-85 0.021664442817159048 86-87 0.030969878175497907 88-89 0.029812125720339106 90-91 0.030564664816192324 92-93 0.02626650882641528 94-95 0.02117239802371656 96-97 0.01813329782892471 98-99 0.023994419633166134 100-101 0.023806284859202827 102-103 0.025731048315904333 104-105 0.02302480195197064 106-107 0.014949478577238006 108-109 0.017207095864797666 110-111 0.02030408368234746 112-113 0.013603591348115902 114-115 0.014008804707421482 116-117 0.012851052252262681 118-119 0.007554334769911171 120-121 0.005528267973383271 122-123 0.003994245970297861 124-125 0.05725085890760267 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 3454970.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.33668005120548 #Duplication Level Percentage of deduplicated Percentage of total 1 74.57859837907665 42.015106355493934 2 13.468852648428904 15.175808846227415 3 5.057239754718881 8.547242940115035 4 2.37629765675659 5.354908831805013 5 1.3163153319514949 3.707841785132384 6 0.7836913765755302 2.649034220461466 7 0.5231880619949064 2.063227491865211 8 0.34627142324010274 1.5606225905562578 9 0.26848035345634647 1.3612762595434276 >10 1.1866741429146352 11.617142761560583 >50 0.062485041172159674 2.399232360983637 >100 0.030768653637561774 2.9575293526100057 >500 7.236575075671464E-4 0.2506677967947333 >1k 4.1351856874456146E-4 0.3403584068509097 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.7887622757940014E-5 2 2.8943811378970007E-5 0.0 0.0 0.0 5.7887622757940014E-5 3 2.8943811378970007E-5 0.0 0.0 0.0 5.7887622757940014E-5 4 2.8943811378970007E-5 0.0 0.0 0.0 5.7887622757940014E-5 5 8.683143413691001E-5 0.0 0.0 0.0 8.683143413691001E-5 6 8.683143413691001E-5 0.0 0.0 0.0 1.1577524551588003E-4 7 1.1577524551588003E-4 0.0 0.0 5.7887622757940014E-5 1.1577524551588003E-4 8 1.1577524551588003E-4 0.0 0.0 5.7887622757940014E-5 1.1577524551588003E-4 9 1.1577524551588003E-4 0.0 0.0 8.683143413691001E-5 1.1577524551588003E-4 10-11 1.1577524551588003E-4 0.0 0.0 1.0130333982639501E-4 1.1577524551588003E-4 12-13 1.4471905689485002E-4 0.0 0.0 1.7366286827382002E-4 3.4732573654764004E-4 14-15 1.4471905689485002E-4 0.0 0.0 1.7366286827382002E-4 4.7757288775300506E-4 16-17 1.7366286827382002E-4 0.0 0.0 1.7366286827382002E-4 6.078200389583701E-4 18-19 2.1707858534227503E-4 0.0 0.0 2.1707858534227503E-4 7.670110015427052E-4 20-21 2.6049430241073003E-4 0.0 0.0 2.4602239672124503E-4 9.117300584375553E-4 22-23 2.6049430241073003E-4 0.0 0.0 3.6179764223712505E-4 9.262019641270402E-4 24-25 4.0521335930558005E-4 0.0 0.0 4.6310098206352006E-4 9.262019641270402E-4 26-27 4.0521335930558005E-4 0.0 0.0 7.525390958532201E-4 0.00101303339826395 28-29 4.775728877530051E-4 0.0 0.0 0.0022286734761806904 0.0010419772096429201 30-31 5.209886048214601E-4 0.0 0.0 0.008133210997490571 0.0010564491153324052 32-33 5.209886048214601E-4 0.0 0.0 0.020752712758721495 0.0010998648324008601 34-35 6.367638503373401E-4 0.0 0.0 0.03814794339748247 0.0011577524551588001 36-37 7.235952844742501E-4 0.0 0.0 0.06442892412958723 0.0011577524551588001 38-39 8.393705299901302E-4 0.0 0.0 0.10780122548097379 0.0011722243608482852 40-41 8.683143413691002E-4 0.0 0.0 0.15966853547208804 0.0011866962665377703 42-43 9.262019641270401E-4 0.0 0.0 0.21363427178817762 0.0011866962665377703 44-45 0.0010709210210218902 0.0 0.0 0.27354796134264553 0.0012156400779167404 46-47 0.00112880864377983 0.0 0.0 0.3430709962749315 0.0012445838892957103 48-49 0.0012735277006746802 0.0 0.0 0.42030755693971295 0.001259055794985195 50-51 0.0012735277006746802 0.0 0.0 0.5012055097439341 0.0013024715120536503 52-53 0.0012735277006746802 0.0 0.0 0.585735910876216 0.0014182467575695303 54-55 0.0012735277006746802 0.0 0.0 0.6779508939296144 0.0014761343803274703 56-57 0.0013893029461905602 0.0 0.0 0.7858678946561042 0.0015774377201538653 58-59 0.0013893029461905602 0.0 0.0 0.903640263157133 0.0016208534372223202 60-61 0.0014327186632590153 0.0 0.0 1.0299365841092687 0.0016497972486012903 62-63 0.0014761343803274703 0.0 0.0 1.1578827023100056 0.0017366286827382004 64-65 0.0015050781917064402 0.0 0.0 1.2974497607793989 0.0017366286827382004 66-67 0.0015340220030854103 0.0 0.0 1.454339690359106 0.0017511005884276853 68-69 0.0015484939087748954 0.0 0.0 1.6319533888861555 0.0017655724941171703 70-71 0.0015629658144643802 0.0 0.0 1.8280332390729876 0.0017800443998066554 72-73 0.0015629658144643802 0.0 0.0 2.0292940314966557 0.0019826510794594453 74-75 0.0015629658144643802 0.0 0.0 2.2357212942514693 0.0021852577591122352 76-77 0.0015629658144643802 0.0 0.0 2.4603686862693452 0.0022142015704912053 78-79 0.0015774377201538653 0.0 0.0 2.72016833720698 0.0022286734761806904 80-81 0.0017366286827382004 0.0 0.0 2.9995050608254195 0.0022576172875596605 82-83 0.0017366286827382004 0.0 0.0 3.2923006567350805 0.0023589206273860555 84-85 0.0018089882111856255 0.0 0.0 3.586311892722658 0.0023878644387650256 86-87 0.0018668758339435653 0.0 0.0 3.902971661114279 0.0025036396842809056 88-89 0.0019102915510120205 0.0 0.0 4.25814117054562 0.0026338868354862707 90-91 0.00205501060790687 0.0 0.0 4.639779795483029 0.0026338868354862707 92-93 0.0020839544192858403 0.0 0.0 5.036744168545603 0.0026917744582442104 94-95 0.0020839544192858403 0.0 0.0 5.439526247695349 0.0026917744582442104 96-97 0.0020839544192858403 0.0 0.0 5.860123242748852 0.003125931628928761 98-99 0.0021852577591122352 0.0 0.0 6.30836157766927 0.0034153697427184606 100-101 0.00225761728755966 0.0 0.0 6.807425245371161 0.0034153697427184606 102-103 0.0023299768160070853 0.0 0.0 7.33489726394151 0.003487729271165886 104-105 0.0024891677785914205 0.0 2.8943811378970007E-5 7.864742675044935 0.0035311449882343407 106-107 0.0025470554013493603 0.0 2.8943811378970007E-5 8.402533162371888 0.0035311449882343407 108-109 0.0026049430241073005 0.0 2.8943811378970007E-5 8.959527868548786 0.0035311449882343407 110-111 0.0026338868354862707 0.0 2.8943811378970007E-5 9.556450562522974 0.0036179764223712506 112-113 0.0026628306468652403 0.0 2.8943811378970007E-5 10.190348975533796 0.0036469202337502207 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 7610 0.0 41.50689 1 GGTATCA 4760 0.0 38.938786 1 ATCAACG 9765 0.0 32.028267 3 TCAACGC 9735 0.0 32.005505 4 CAACGCA 9690 0.0 31.986198 5 TATCAAC 10015 0.0 31.4635 2 AACGCAG 10145 0.0 30.725769 6 ACGCAGA 11545 0.0 26.590693 7 CGCAGAG 11905 0.0 25.78735 8 GTACATG 12000 0.0 25.080667 1 TACATGG 12100 0.0 23.826612 2 ACATGGG 11685 0.0 23.553726 3 GCAGAGT 13245 0.0 21.920692 9 CATGGGG 8220 0.0 21.742447 4 AGAGTAC 11505 0.0 20.970234 10-11 GTACCGT 415 2.910383E-11 20.067974 6 GAGTACT 6005 0.0 18.875288 12-13 AGTACTT 6795 0.0 18.6072 12-13 CAGAGTA 12485 0.0 18.371088 10-11 GTACTTT 6495 0.0 17.359676 14-15 >>END_MODULE