##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920985_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2027290 Sequences flagged as poor quality 0 Sequence length 125 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.553526135875973 31.0 29.0 33.0 16.0 34.0 2 28.673619955704414 31.0 29.0 34.0 16.0 34.0 3 28.802661188088532 31.0 29.0 34.0 18.0 34.0 4 32.20379965372492 35.0 33.0 37.0 22.0 37.0 5 32.348470618411774 35.0 33.0 37.0 23.0 37.0 6 32.31227698059972 35.0 33.0 37.0 22.0 37.0 7 32.13853370756034 35.0 32.0 37.0 19.0 37.0 8 32.209096873165656 35.0 33.0 37.0 21.0 37.0 9 33.36785610346818 37.0 33.0 39.0 18.0 39.0 10-11 33.32605522643529 37.0 33.0 39.0 18.0 39.0 12-13 33.28211035421671 37.0 33.0 39.0 18.0 39.0 14-15 34.21430653729856 38.0 33.0 41.0 17.0 41.0 16-17 34.093898504900636 38.0 33.0 41.0 17.0 41.0 18-19 34.203857612872355 38.5 33.0 41.0 17.5 41.0 20-21 34.23017476532711 39.0 33.0 41.0 18.0 41.0 22-23 34.204883119829915 39.0 33.0 41.0 18.0 41.0 24-25 34.14225715117226 39.0 33.0 41.0 18.0 41.0 26-27 34.00697285538823 38.5 33.0 41.0 18.0 41.0 28-29 33.93463589323679 38.0 33.0 41.0 17.0 41.0 30-31 33.81690310710357 38.0 33.0 40.5 16.5 41.0 32-33 33.71369118379709 38.0 33.0 40.0 16.0 41.0 34-35 33.54946899555564 38.0 32.0 40.0 15.5 41.0 36-37 33.410061214725076 38.0 32.0 40.0 14.5 41.0 38-39 33.29420260544865 38.0 32.0 40.0 10.5 41.0 40-41 33.21674748062685 38.0 32.0 40.0 9.0 41.0 42-43 33.00690873037405 38.0 32.0 40.0 9.0 41.0 44-45 32.85230578752916 38.0 31.5 40.0 8.0 41.0 46-47 32.66861598488623 38.0 31.0 40.0 7.5 41.0 48-49 32.507479443000264 38.0 31.0 40.0 3.5 41.0 50-51 32.296533796348825 37.5 31.0 40.0 2.0 41.0 52-53 32.126854816035205 37.0 31.0 40.0 2.0 41.0 54-55 31.924040467816642 37.0 30.0 40.0 2.0 41.0 56-57 31.72650829432395 37.0 30.0 40.0 2.0 41.0 58-59 31.475046490635282 36.0 30.0 40.0 2.0 41.0 60-61 31.29354927020801 36.0 29.5 40.0 2.0 41.0 62-63 31.18523990154344 36.0 30.0 39.0 2.0 41.0 64-65 30.96347981788496 35.5 29.5 39.0 2.0 41.0 66-67 30.70356535078849 35.0 29.0 39.0 2.0 41.0 68-69 30.40117348775952 35.0 29.0 39.0 2.0 40.0 70-71 30.074270084694344 35.0 29.0 38.0 2.0 40.0 72-73 29.781175362183014 35.0 29.0 37.0 2.0 40.0 74-75 29.470732110354216 34.5 29.0 37.0 2.0 39.0 76-77 29.17401062502158 34.0 29.0 36.0 2.0 39.0 78-79 28.839179643760882 34.0 28.0 36.0 2.0 38.5 80-81 28.51150748042954 34.0 28.0 35.5 2.0 37.0 82-83 28.227097504550407 34.0 27.5 35.0 2.0 37.0 84-85 27.965229937502777 34.0 27.0 35.0 2.0 36.5 86-87 27.869254522046674 34.0 27.0 35.0 2.0 36.0 88-89 27.926611880885318 34.0 28.0 35.0 2.0 36.0 90-91 27.81448534743426 34.0 27.0 35.0 2.0 36.0 92-93 27.646611239635178 34.0 27.0 35.0 2.0 35.0 94-95 27.56133187654455 34.0 27.0 35.0 2.0 35.0 96-97 27.454105234080963 34.0 27.0 35.0 2.0 35.0 98-99 27.378430811576045 34.0 27.0 35.0 2.0 35.0 100-101 27.19553147305023 34.0 26.0 35.0 2.0 35.0 102-103 25.861038874556673 31.5 24.0 34.0 2.0 35.0 104-105 26.855916272462252 33.5 25.0 35.0 2.0 35.0 106-107 27.031399553097977 34.0 25.0 35.0 2.0 35.0 108-109 27.02006447030272 34.0 25.0 35.0 2.0 35.0 110-111 26.90973393051808 34.0 25.0 35.0 2.0 35.0 112-113 26.806943752497176 34.0 25.0 35.0 2.0 35.0 114-115 26.666521563269193 34.0 25.0 35.0 2.0 35.0 116-117 26.530361961041585 34.0 25.0 35.0 2.0 35.0 118-119 26.342609345480913 34.0 24.5 35.0 2.0 35.0 120-121 26.128550429390963 34.0 24.0 35.0 2.0 35.0 122-123 25.898456066966247 34.0 23.5 35.0 2.0 35.0 124-125 24.753144592041593 32.5 11.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 107002.0 3 15103.0 4 9527.0 5 8816.0 6 10062.0 7 11216.0 8 11681.0 9 12277.0 10 13129.0 11 13730.0 12 13949.0 13 14164.0 14 14622.0 15 13500.0 16 11479.0 17 10269.0 18 9670.0 19 9451.0 20 9429.0 21 10278.0 22 12192.0 23 16232.0 24 21734.0 25 27815.0 26 32052.0 27 36288.0 28 42034.0 29 49810.0 30 57944.0 31 69330.0 32 84812.0 33 106090.0 34 136528.0 35 187695.0 36 290040.0 37 393434.0 38 133706.0 39 200.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.147195347430326 19.526601232915176 12.924934088431787 24.401269331222718 2 15.351431142545902 20.56818450924362 39.89117435784089 24.189209990369587 3 19.000763762527086 25.186056103982224 29.28979952713824 26.523380606352454 4 12.460616227150505 16.521745565779412 37.02543355453043 33.992204652539655 5 13.334941623030709 38.323323456658564 34.72771063414962 13.614024286161111 6 32.39765527998568 36.83369072407018 17.27482287083667 13.493831125107475 7 27.9015941231139 32.79367165286435 21.510056255043914 17.79467796897784 8 25.81469929097816 36.4936346877576 19.87471135712591 17.816954664138336 9 26.0016120503228 16.677124275859892 19.516513156856245 37.804750516961064 10-11 24.623185110021808 26.976542394419067 27.958542592723223 20.4417299028359 12-13 25.17642775693113 24.39338968464625 27.956057519481604 22.47412503894101 14-15 22.507238309134934 25.73390004955026 25.156956434985688 26.601905206329114 16-17 22.58452935629954 28.85325093557027 26.048870890686572 22.513348817443624 18-19 22.68593114106298 27.947981775666474 27.589843483133514 21.77624360013703 20-21 23.556419699859212 27.026803710766966 27.332178363856823 22.084598225517 22-23 22.975585657865757 26.92868222139955 27.047881845130266 23.047850275604425 24-25 22.740559799650857 27.145961965430203 27.238253979137365 22.87522425578157 26-27 22.682183845819367 27.179464286374927 27.124439236535448 23.01391263127026 28-29 22.691436566901892 27.435868407870196 27.194947165290767 22.67774785993715 30-31 22.959756854618625 27.344729807087333 27.023607427644492 22.67190591064955 32-33 22.516202672633256 27.33791284814351 27.04214840607333 23.103736073149904 34-35 22.798567230503526 27.355962119713507 27.136167859572407 22.709302790210558 36-37 23.016679164117846 27.01440002367938 27.041581979990926 22.927338832211852 38-39 22.875261653008216 27.203329822017995 27.051005657648975 22.870402867324817 40-41 22.896288654149092 27.230915278850997 27.10076401284199 22.772032054157922 42-43 22.948156329396003 27.136651951108405 27.012467076209557 22.90272464328604 44-45 22.877477854323423 27.195823126607465 27.03765381613983 22.889045202929275 46-47 22.939219742716695 27.26790550391678 26.96067136604478 22.832203387321744 48-49 22.778699269808346 27.378450405298913 26.894508825564227 22.94834149932851 50-51 22.699382719855947 27.537946387277003 26.865314529208266 22.897356363658787 52-53 22.9077927773056 27.398213046350005 26.62665020429163 23.067343972052768 54-55 22.7988686357679 27.416567067218406 26.712374715568142 23.07218958144555 56-57 22.797371061352095 27.332630586174 26.713007859784675 23.156990492689225 58-59 22.78316502336081 27.13260188257882 26.874032182715023 23.210200911345346 60-61 22.75429400409269 27.318106156813005 26.97533067179605 22.95226916729826 62-63 22.597092246112968 27.19433890544706 27.066146331933666 23.142422516506304 64-65 22.5226174111084 27.307442131568127 26.843241613915115 23.326698843408362 66-67 22.649854066193818 27.333720056686538 26.723866207531337 23.292559669588304 68-69 22.983248482689948 27.023472645255907 26.840337324162345 23.152941547891796 70-71 22.605374663414494 27.102430765808016 26.909870683584593 23.382323887192893 72-73 22.74100769113127 26.914889418404446 26.936990937390544 23.407111953073738 74-75 22.688861944863184 27.11962226624468 26.825455001065485 23.36606078782665 76-77 22.639235244195184 26.961124650174632 26.96963366590842 23.430006439721762 78-79 22.725957707298434 27.009389197773466 27.023866749306276 23.24078634562182 80-81 22.745943994092283 27.042308547987133 26.889386679715997 23.32236077820459 82-83 22.61653042706386 26.934129222870695 27.009748923356497 23.439591426708947 84-85 22.64963546856348 27.10710515671399 26.803222083008592 23.44003729171394 86-87 22.604351389999266 26.881862334336393 27.019482116458555 23.494304159205786 88-89 22.619013559974153 26.79039505941429 26.88887628311687 23.701715097494684 90-91 22.51036489869406 26.977593074447228 26.903404816810745 23.60863721004797 92-93 22.598973738145116 26.859492206837913 27.046141330904206 23.49539272411276 94-95 22.367672645777517 26.79808673714785 27.186323604061542 23.647917013013085 96-97 22.53622357303972 26.57733019101776 27.220419624919995 23.666026611022524 98-99 22.574687650988935 26.727535374726326 27.00396767162763 23.693809302657108 100-101 22.32144531045718 26.730685169671727 27.077912531069398 23.869956988801697 102-103 22.27737962279639 26.59573051134413 27.244727515973338 23.882162349886144 104-105 22.246399886341408 26.73986069423003 27.02857028691148 23.985169132517086 106-107 22.14159782346192 26.806284608156787 27.079609953877583 23.97250761450371 108-109 22.145143510864045 26.850195342898996 27.086002920955377 23.91865822528158 110-111 22.088605159235293 26.999272749519935 26.981140826085497 23.930981265159275 112-113 22.057109370259855 27.023731361910546 26.931043446905218 23.98811582092438 114-115 22.03174886657883 27.09347126220159 26.92400386099529 23.95077601022429 116-117 21.979423826696635 26.993851714512562 27.04614186267867 23.98058259611213 118-119 21.97954930732201 26.85395910601413 26.927608632434847 24.238882954229016 120-121 21.853799721374813 27.054120771783875 26.95646876122295 24.135610745618365 122-123 21.84578788026783 27.012181495552 26.94444896652395 24.197581657656215 124-125 21.75630906360701 27.09502369639008 26.899431311315414 24.2492359286875 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1306.0 1 921.5 2 423.5 3 294.5 4 230.5 5 177.0 6 167.0 7 204.0 8 281.0 9 316.5 10 318.0 11 336.5 12 382.0 13 453.5 14 522.0 15 579.0 16 662.5 17 762.5 18 901.0 19 1099.5 20 1364.5 21 1764.0 22 2370.0 23 3167.0 24 4150.5 25 5601.5 26 7634.0 27 10241.0 28 13086.5 29 16305.5 30 20212.0 31 25345.0 32 30791.0 33 34773.5 34 37880.5 35 41015.0 36 45142.0 37 50216.0 38 54540.0 39 57513.0 40 61031.5 41 64187.0 42 66292.0 43 69662.5 44 72810.5 45 76121.5 46 78920.5 47 80466.0 48 81806.5 49 82164.5 50 84762.0 51 84942.5 52 80071.0 53 76028.0 54 71749.0 55 66039.5 56 59839.0 57 53452.0 58 48102.0 59 42786.5 60 35863.0 61 29175.0 62 23282.5 63 17027.0 64 12160.5 65 9082.5 66 6650.0 67 4924.0 68 3655.0 69 2668.5 70 2054.5 71 1612.5 72 1208.0 73 1023.5 74 806.0 75 575.5 76 401.0 77 270.5 78 198.0 79 140.5 80 120.0 81 91.5 82 58.5 83 42.5 84 29.0 85 20.5 86 15.0 87 12.5 88 12.0 89 12.0 90 9.5 91 6.5 92 5.0 93 4.0 94 3.0 95 5.0 96 5.5 97 5.0 98 6.0 99 5.0 100 7.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03507145006387838 2 0.018645581046618884 3 0.023775582181138368 4 0.021703850953736267 5 0.01440346472384316 6 0.004784712596619132 7 0.00463673179466184 8 0.006461828352135117 9 0.0028609621711743263 10-11 0.004982020332562189 12-13 0.009150146254359268 14-15 0.0027376448362099156 16-17 0.0024910101662810945 18-19 2.4663466992882126E-5 20-21 0.005327308870462539 22-23 9.125482787366386E-4 24-25 0.0014304810855871632 26-27 0.001553798420551574 28-29 0.0035268757799821436 30-31 0.0012578368166369883 32-33 4.932693398576425E-5 34-35 0.008237597975622629 36-37 0.010358656137010492 38-39 0.0017017792225088664 40-41 0.0016524522885231023 42-43 0.0034775488459963793 44-45 0.001578461887544456 46-47 0.02451548619092483 48-49 0.004069472053825551 50-51 0.012455050831405471 52-53 0.002022404293416334 54-55 1.4798080195729273E-4 56-57 3.94615471886114E-4 58-59 0.008730867315480272 60-61 7.645674767793458E-4 62-63 0.01289899323727735 64-65 0.012652358567348528 66-67 4.932693398576425E-5 68-69 0.004957356865569307 70-71 0.006437164885142233 72-73 0.01381154151601399 74-75 0.0020717312274020983 76-77 0.001405817618594281 78-79 6.659136088078174E-4 80-81 0.005475289672419831 82-83 0.0019977408264234523 84-85 0.0014798080195729273 86-87 0.016203897814323555 88-89 0.0 90-91 7.399040097864636E-4 92-93 0.011073896679804074 94-95 0.008730867315480272 96-97 0.00604254941325612 98-99 0.0015044714865658096 100-101 0.01854692717864736 102-103 0.007990963305693809 104-105 0.008212934508629748 106-107 0.019804763995284344 108-109 0.010531300405960667 110-111 0.02357827444519531 112-113 0.002811635237188562 114-115 0.017338417295996132 116-117 0.006881107291014113 118-119 0.0059932224792703555 120-121 0.009569425193238263 122-123 0.009816059863167085 124-125 0.05610938740880683 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 2027290.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.300337209796766 #Duplication Level Percentage of deduplicated Percentage of total 1 71.50671764504659 37.39825445601661 2 13.617185289319528 14.243667649593903 3 5.805698431429047 9.109199571063819 4 2.996548284431455 6.268819429648123 5 1.734600599051322 4.5360098127349815 6 1.0940824194835763 3.4332527684580816 7 0.7257815914669996 2.657103538207092 8 0.5048299396559044 2.112222086208412 9 0.3802229340035824 1.7897208896957093 >10 1.554011508603338 13.389382341542758 >50 0.05818179096913369 2.0767473213207155 >100 0.020136381800019126 1.979854656713436 >500 0.0015262359920765111 0.5416965063874427 >1k 4.7694874752390247E-4 0.4640689724089091 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA 2738 0.1350571452530225 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 2515 0.12405723897419708 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 0.0 4.9326933985764246E-5 12-13 0.0 0.0 0.0 0.0 2.219712029359391E-4 14-15 0.0 0.0 0.0 4.9326933985764246E-5 2.7129813692170336E-4 16-17 0.0 0.0 0.0 9.865386797152849E-5 2.9596160391458546E-4 18-19 0.0 0.0 0.0 9.865386797152849E-5 2.9596160391458546E-4 20-21 0.0 0.0 0.0 1.9730773594305696E-4 3.6995200489323187E-4 22-23 0.0 0.0 0.0 6.659136088078173E-4 4.439424058718782E-4 24-25 0.0 0.0 0.0 0.0013811541516013989 4.439424058718782E-4 26-27 0.0 0.0 0.0 0.002392356298309566 4.439424058718782E-4 28-29 0.0 0.0 0.0 0.00545062620542695 4.439424058718782E-4 30-31 0.0 0.0 0.0 0.01474875326174351 4.439424058718782E-4 32-33 0.0 0.0 0.0 0.032901064968504756 4.439424058718782E-4 34-35 0.0 2.4663466992882123E-5 0.0 0.057120589555514995 4.439424058718782E-4 36-37 0.0 4.9326933985764246E-5 0.0 0.09729737728691998 4.439424058718782E-4 38-39 0.0 4.9326933985764246E-5 0.0 0.16435734404056646 4.932693398576424E-4 40-41 0.0 4.9326933985764246E-5 0.0 0.2429844768138747 4.932693398576424E-4 42-43 0.0 4.9326933985764246E-5 0.0 0.312387472931845 4.932693398576424E-4 44-45 0.0 4.9326933985764246E-5 0.0 0.39274104839465496 5.179328068505246E-4 46-47 0.0 4.9326933985764246E-5 0.0 0.49243078197988444 5.425962738434067E-4 48-49 0.0 4.9326933985764246E-5 0.0 0.594216910259509 5.919232078291709E-4 50-51 0.0 4.9326933985764246E-5 0.0 0.7078168392287241 6.905770758006994E-4 52-53 0.0 4.9326933985764246E-5 0.0 0.8195176812394872 6.905770758006994E-4 54-55 0.0 4.9326933985764246E-5 0.0 0.9364471782527414 7.892309437722279E-4 56-57 0.0 4.9326933985764246E-5 0.0 1.071701631241707 8.138944107651101E-4 58-59 0.0 4.9326933985764246E-5 0.0 1.2196824331989995 8.385578777579922E-4 60-61 0.0 4.9326933985764246E-5 0.0 1.3842124215085163 8.878848117437564E-4 62-63 0.0 4.9326933985764246E-5 0.0 1.5473859191334243 8.878848117437564E-4 64-65 0.0 4.9326933985764246E-5 0.0 1.715492110156909 9.372117457295206E-4 66-67 0.0 4.9326933985764246E-5 0.0 1.907793162300411 9.618752127224027E-4 68-69 0.0 4.9326933985764246E-5 0.0 2.119874314972204 9.865386797152848E-4 70-71 0.0 4.9326933985764246E-5 0.0 2.3652758115513812 0.001011202146708167 72-73 0.0 4.9326933985764246E-5 0.0 2.607249086218548 0.0010851925476868135 74-75 0.0 4.9326933985764246E-5 0.0 2.848235822205999 0.0011345194816725778 76-77 0.0 4.9326933985764246E-5 0.0 3.1127515057046597 0.0011345194816725778 78-79 0.0 4.9326933985764246E-5 0.0 3.4170740249298324 0.0011345194816725778 80-81 0.0 4.9326933985764246E-5 0.0 3.744432222326357 0.0011345194816725778 82-83 0.0 4.9326933985764246E-5 0.0 4.093099655204732 0.0012331733496441062 84-85 0.0 4.9326933985764246E-5 0.0 4.442630309427857 0.0012331733496441062 86-87 0.0 4.9326933985764246E-5 0.0 4.804295389411481 0.0013564906846085167 88-89 0.0 4.9326933985764246E-5 0.0 5.219899471708537 0.0015044714865658096 90-91 0.0 4.9326933985764246E-5 0.0 5.665223031732017 0.0015291349535586916 92-93 0.0 4.9326933985764246E-5 0.0 6.1211025556284495 0.0016524522885231023 94-95 0.0 4.9326933985764246E-5 0.0 6.577549339265719 0.0016771157555159845 96-97 0.0 4.9326933985764246E-5 0.0 7.053850213832259 0.0019237504254448054 98-99 0.0 4.9326933985764246E-5 0.0 7.565962442472463 0.0019730773594305697 100-101 0.0 4.9326933985764246E-5 0.0 8.137809588169429 0.0019730773594305697 102-103 0.0 4.9326933985764246E-5 0.0 8.73118794055118 0.002022404293416334 104-105 0.0 4.9326933985764246E-5 0.0 9.3149722042727 0.002022404293416334 106-107 0.0 4.9326933985764246E-5 0.0 9.901839401368328 0.002022404293416334 108-109 0.0 4.9326933985764246E-5 0.0 10.509251266469029 0.0020717312274020983 110-111 0.0 4.9326933985764246E-5 0.0 11.169196316264571 0.002170385095373627 112-113 0.0 4.9326933985764246E-5 0.0 11.868775557517672 0.002170385095373627 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CATGGGG 5110 0.0 29.575312 4 GTACATG 10555 0.0 27.458256 1 TACATGG 10640 0.0 26.284164 2 ACATGGG 10425 0.0 25.912363 3 GTATCAA 7350 0.0 25.019197 1 TAGACGC 250 2.0116204E-8 23.798801 5 TCAACGC 7910 0.0 22.340685 4 AACGCAG 8100 0.0 22.182833 6 CAACGCA 8125 0.0 21.968122 5 TATCAAC 8445 0.0 21.490086 2 ATCAACG 8300 0.0 21.363157 3 TATGCGT 235 7.3990086E-6 20.255297 4 ACGCAGA 9010 0.0 19.74429 7 CGCAGAG 8980 0.0 19.478975 8 ATGGGGG 2480 0.0 19.43249 5 GGTATCA 5660 0.0 18.925978 1 ATGGGGA 3080 0.0 18.54452 5 GTCTAGG 745 0.0 18.372734 1 GTATATA 1155 0.0 17.51859 1 TGTACGC 170 0.009690153 17.500847 2 >>END_MODULE