##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920984_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3123756 Sequences flagged as poor quality 0 Sequence length 125 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.81135850559391 31.0 30.0 33.0 22.0 34.0 2 28.927372048264974 31.0 30.0 34.0 22.0 34.0 3 29.03884138197734 31.0 30.0 34.0 22.0 34.0 4 32.461480346096174 35.0 33.0 37.0 24.0 37.0 5 32.593406143117456 35.0 33.0 37.0 25.0 37.0 6 32.56953199929828 35.0 33.0 37.0 25.0 37.0 7 32.40051047520997 35.0 33.0 37.0 23.0 37.0 8 32.471139551232554 35.0 33.0 37.0 23.0 37.0 9 33.65510366366643 38.0 33.0 39.0 22.0 39.0 10-11 33.60972639988527 37.5 33.0 39.0 21.5 39.0 12-13 33.57166836974463 38.0 33.0 39.0 22.0 39.0 14-15 34.52716425354605 39.0 33.0 41.0 20.0 41.0 16-17 34.40141499528132 39.0 33.0 41.0 18.5 41.0 18-19 34.52131168375507 39.0 33.5 41.0 20.0 41.0 20-21 34.541752620883315 39.0 34.0 41.0 20.0 41.0 22-23 34.5151754810555 39.0 34.0 41.0 21.5 41.0 24-25 34.448733351772674 39.0 33.5 41.0 20.5 41.0 26-27 34.30555571561928 39.0 33.0 41.0 19.5 41.0 28-29 34.23860794505077 39.0 33.0 41.0 19.0 41.0 30-31 34.116764881764134 38.0 33.0 41.0 18.5 41.0 32-33 34.014443669736046 38.0 33.0 41.0 18.5 41.0 34-35 33.84336468661445 38.0 33.0 40.0 17.0 41.0 36-37 33.71442375780951 38.0 33.0 40.0 16.0 41.0 38-39 33.59761998056186 38.0 33.0 40.0 16.0 41.0 40-41 33.51743494050112 38.0 32.5 40.0 15.0 41.0 42-43 33.31938970265283 38.0 32.0 40.0 13.5 41.0 44-45 33.171963495228184 38.0 32.0 40.0 11.0 41.0 46-47 32.9894145061266 38.0 32.0 40.0 9.0 41.0 48-49 32.83151500949498 38.0 31.5 40.0 8.5 41.0 50-51 32.621091083938694 38.0 31.0 40.0 7.5 41.0 52-53 32.446611547124675 37.0 31.0 40.0 6.5 41.0 54-55 32.23984203631782 37.0 31.0 40.0 2.0 41.0 56-57 32.055564038932616 37.0 31.0 40.0 2.0 41.0 58-59 31.807296728681756 36.5 30.0 40.0 2.0 41.0 60-61 31.62901919996312 36.0 30.0 40.0 2.0 41.0 62-63 31.517611970973405 36.0 30.0 39.5 2.0 41.0 64-65 31.30006969174289 35.5 30.0 39.0 2.0 41.0 66-67 31.039075555197012 35.0 30.0 39.0 2.0 41.0 68-69 30.731962419599995 35.0 30.0 39.0 2.0 40.0 70-71 30.40599281762084 35.0 29.0 38.0 2.0 40.0 72-73 30.115006421756373 35.0 29.0 37.0 2.0 40.0 74-75 29.797290345340674 35.0 29.0 37.0 2.0 39.0 76-77 29.494517657589135 34.0 29.0 36.0 2.0 39.0 78-79 29.157789692920957 34.0 29.0 36.0 2.0 38.5 80-81 28.825138711218163 34.0 29.0 35.5 2.0 37.0 82-83 28.5388322583454 34.0 28.0 35.0 2.0 37.0 84-85 28.284564159300537 34.0 28.0 35.0 2.0 36.5 86-87 28.19810318091426 34.0 28.0 35.0 2.0 36.0 88-89 28.275615477009087 34.0 29.0 35.0 2.0 36.0 90-91 28.173969413744224 34.0 29.0 35.0 2.0 35.5 92-93 28.01485327279083 34.0 28.0 35.0 2.0 35.0 94-95 27.930797571897422 34.0 28.0 35.0 2.0 35.0 96-97 27.8272044935648 34.0 28.0 35.0 2.0 35.0 98-99 27.75928337552613 34.0 27.5 35.0 2.0 35.0 100-101 27.586449773926006 34.0 27.0 35.0 2.0 35.0 102-103 26.262580047865455 31.5 24.5 34.0 2.0 35.0 104-105 27.26163663231059 33.5 26.5 35.0 2.0 35.0 106-107 27.43797739003943 34.0 27.0 35.0 2.0 35.0 108-109 27.42565072303983 34.0 27.0 35.0 2.0 35.0 110-111 27.313335932768116 34.0 27.0 35.0 2.0 35.0 112-113 27.215475056310417 34.0 27.0 35.0 2.0 35.0 114-115 27.07512590612071 34.0 26.0 35.0 2.0 35.0 116-117 26.938213804151154 34.0 25.0 35.0 2.0 35.0 118-119 26.74065291911404 34.0 25.0 35.0 2.0 35.0 120-121 26.519126173747246 34.0 25.0 35.0 2.0 35.0 122-123 26.282689332969667 34.0 25.0 35.0 2.0 35.0 124-125 25.11693759051603 32.5 20.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 149033.0 3 21502.0 4 13722.0 5 12553.0 6 14544.0 7 16169.0 8 17245.0 9 18240.0 10 19511.0 11 20487.0 12 20880.0 13 21205.0 14 22041.0 15 20005.0 16 16529.0 17 14717.0 18 13935.0 19 13227.0 20 13812.0 21 14925.0 22 18112.0 23 23774.0 24 32519.0 25 41621.0 26 48256.0 27 55357.0 28 65077.0 29 75559.0 30 89468.0 31 105787.0 32 130305.0 33 164263.0 34 213646.0 35 295292.0 36 463163.0 37 624485.0 38 202594.0 39 196.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.998060632766595 19.868010304009264 13.723296873058551 24.41063219016559 2 15.615593596962096 20.439548476644983 39.97649850073882 23.968359425654096 3 18.64789123853913 24.701362592210483 29.85599186428 26.794754304970386 4 12.847835261224258 16.745082293181586 36.98367840691723 33.42340403867693 5 13.78494566506783 37.77773793404632 34.70052473127093 13.736791669614925 6 32.34779913939568 36.602831523306776 17.450911906989937 13.598457430307601 7 27.95874658249083 32.75091080221026 21.43032763268259 17.860014982616324 8 25.527758462383645 36.14663649623446 20.084723081277044 18.240881960104854 9 26.022787298274146 16.602490019752405 19.78877410225792 37.58594857971553 10-11 24.719107058819763 26.57679735946549 28.110631608939656 20.59346397277509 12-13 25.214757709251103 24.181404313082677 27.82386538264522 22.779972595021004 14-15 22.618757211036712 25.708394319015625 25.226735482846536 26.446112987101127 16-17 22.72348569186721 28.534295356253516 26.12373709281202 22.61848185906725 18-19 22.70328862271347 27.787987180170532 27.486699098792815 22.022025098323187 20-21 23.805573892459872 26.86558348385246 27.056610985794112 22.272231637893555 22-23 23.332375611548045 26.699293233335442 26.826688905019875 23.141642250096638 24-25 22.990965420881928 26.856708210609753 27.096886549228717 23.055439819279606 26-27 22.913691439444943 26.970404752552334 27.023754758362728 23.092149049639996 28-29 22.865930618304635 27.19018139763819 26.992928973600698 22.950959010456476 30-31 23.254462703639213 26.99917694366626 26.807482609693622 22.938877743000898 32-33 22.98835120284683 27.002733248051385 26.672969975888 23.335945573213785 34-35 23.256718927481558 27.057297369287138 26.742000484062434 22.943983219168874 36-37 23.290596888226744 26.799709750956012 26.771744546905268 23.137948813911976 38-39 23.102573045741597 26.99208201272173 26.82988708460659 23.075457856930086 40-41 23.329840169759105 26.851970270707636 26.83777245755502 22.980417101978233 42-43 23.19300925768822 26.863574752038783 26.65923204534148 23.284183944931513 44-45 23.153096986047895 26.932001802336796 26.73518534376853 23.179715867846777 46-47 23.190306978138125 26.944508660155726 26.62419144236884 23.240992919337312 48-49 23.074405072514338 27.0197633671804 26.650836935413547 23.254994624891715 50-51 23.119448662524462 27.123583181338383 26.611714768786783 23.14525338735037 52-53 23.274495570560898 26.973199272337872 26.503964446037998 23.248340711063236 54-55 23.10374240716651 26.9264216439752 26.59616169852179 23.373674250336496 56-57 23.10691415987648 27.00966050729428 26.46933220306753 23.414093129761707 58-59 23.119899332474162 26.826211654401504 26.630104629364766 23.423784383759568 60-61 23.136410513498816 26.898155462216483 26.744845475922823 23.220588548361874 62-63 23.088111350784583 26.8956486591403 26.76478427386274 23.251455716212377 64-65 23.046435407947026 26.81205472013862 26.66334129139604 23.478168580518314 66-67 23.03939426728225 26.937140376610962 26.5513545560886 23.472110800018182 68-69 23.265407717764948 26.816219871864135 26.593082584006627 23.325289826364294 70-71 23.0335252217511 26.652470455997374 26.75872593944782 23.555278382803706 72-73 23.153908868962976 26.779841285315843 26.643115434813335 23.423134410907846 74-75 23.148754920054614 26.928173205130463 26.481186543500566 23.441885331314356 76-77 23.170949357616365 26.70886531832664 26.613514186222027 23.506671137834967 78-79 23.218532287043967 26.738594392134424 26.626725196979578 23.41614812384203 80-81 23.223924231694685 26.84386553072261 26.513480478469265 23.41872975911344 82-83 23.274064496177534 26.78835337977712 26.594400974868144 23.3431811491772 84-85 23.27249241289232 26.786619799469864 26.486016672429024 23.45487111520879 86-87 23.14189627257065 26.722176349244513 26.5768840533541 23.559043324830736 88-89 23.147022366663723 26.623366229628694 26.571745680520504 23.657865723187086 90-91 23.07719149301254 26.704064169274123 26.66891397421935 23.549830363493992 92-93 23.20503525778579 26.534095065638823 26.712917214997496 23.54795246157789 94-95 23.096016207169008 26.60939967140016 26.7343854248171 23.560198696613732 96-97 23.129694781478317 26.488303854396882 26.760040331481367 23.621961032643433 98-99 23.01445071901451 26.559166634653554 26.60118384490287 23.825198801429064 100-101 22.96986878737946 26.560185983399876 26.750674249056967 23.719270980163703 102-103 22.861573294001676 26.56810915110918 26.804909072223897 23.765408482665247 104-105 22.832122149096197 26.722900106194054 26.572861383941937 23.872116360767812 106-107 22.794328237161153 26.797512124080658 26.51483970182758 23.893319936930606 108-109 22.779082261216566 26.77706075655628 26.638382463303 23.805474518924154 110-111 22.733439944569415 26.98909494809066 26.53535949113493 23.74210561620499 112-113 22.71189164547366 27.160037929718612 26.517156730924373 23.610913693883354 114-115 22.726324587408897 27.206511745997595 26.399090973270447 23.66807269332306 116-117 22.728024342616337 27.10211422774958 26.450249081541326 23.719612348092756 118-119 22.788993251720523 27.066814657779087 26.33285642802513 23.81133566247526 120-121 22.73415961093975 27.161847354264484 26.449431435910657 23.654561598885106 122-123 22.748800903090494 27.244499873779272 26.284245876376044 23.72245334675419 124-125 22.780880952960576 27.35290010032378 26.170748379508325 23.695470567207323 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 561.0 1 482.5 2 331.0 3 248.5 4 236.5 5 230.0 6 210.5 7 231.0 8 274.5 9 325.5 10 356.5 11 345.0 12 396.5 13 476.0 14 554.5 15 659.5 16 793.5 17 939.5 18 1084.5 19 1347.0 20 1701.5 21 2112.5 22 2683.0 23 3432.5 24 4477.5 25 5943.5 26 8239.0 27 11328.0 28 14928.5 29 19985.5 30 25991.5 31 33088.5 32 41266.0 33 48084.5 34 53853.0 35 60108.5 36 68106.0 37 76299.5 38 83659.0 39 90134.5 40 95721.0 41 101876.5 42 107524.5 43 113661.5 44 119252.0 45 123797.5 46 128002.0 47 129844.0 48 131176.0 49 131283.5 50 129130.5 51 125620.5 52 119729.5 53 114652.5 54 110111.0 55 102801.0 56 93460.0 57 83389.5 58 75013.0 59 66272.0 60 55719.0 61 46315.5 62 38006.0 63 28889.5 64 20928.5 65 15782.0 66 11816.0 67 8902.0 68 6798.0 69 5242.5 70 4176.5 71 3195.0 72 2436.0 73 2083.5 74 1674.5 75 1222.5 76 919.5 77 631.0 78 422.5 79 274.0 80 181.0 81 140.0 82 93.0 83 60.0 84 45.5 85 37.0 86 26.5 87 20.0 88 19.5 89 15.5 90 15.0 91 17.0 92 14.0 93 9.5 94 8.5 95 10.5 96 8.5 97 9.0 98 7.5 99 10.0 100 19.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.034829865072688135 2 0.017639021741774966 3 0.02362540480114324 4 0.020936334335972463 5 0.014181645429412542 6 0.0043857458777190024 7 0.004353733134086017 8 0.00537814093034155 9 0.0027530959524367463 10-11 0.004673860570415871 12-13 0.00755500749738456 14-15 0.00230491754157495 16-17 0.0019367709897956176 18-19 4.8019115449478125E-5 20-21 0.0039055547232242213 22-23 7.522994753751574E-4 24-25 0.0011364523989709824 26-27 0.001440573463484344 28-29 0.0029931915296841365 30-31 0.0010564205398885188 32-33 0.0 34-35 0.0061464467775332 36-37 0.007410950151036124 38-39 0.0014565798353008365 40-41 0.0011364523989709824 42-43 0.0026250449779048044 44-45 0.0010724269117050116 46-47 0.019271671667057223 48-49 0.003137248876032571 50-51 0.00950778485899667 52-53 0.00171268178436472 54-55 1.4405734634843437E-4 56-57 2.2408920543089792E-4 58-59 0.006610631560211489 60-61 6.242485008432156E-4 62-63 0.009395740256281222 64-65 0.00957181034626264 66-67 6.402548726597083E-5 68-69 0.003793510120508772 70-71 0.004881943404030277 72-73 0.01128449213062736 74-75 0.0019527773616121106 76-77 0.0012324906298699387 78-79 5.922357572102303E-4 80-81 0.004097631185022133 82-83 0.001648656297098749 84-85 0.001152458770787475 86-87 0.01270905922229521 88-89 0.0 90-91 5.762293853937375E-4 92-93 0.008371332460025688 94-95 0.006402548726597084 96-97 0.004529803224067437 98-99 0.001152458770787475 100-101 0.014933944904787697 102-103 0.007458969266485603 104-105 0.007330918291953661 106-107 0.016950747753665778 108-109 0.010884332835215043 110-111 0.01826327024261818 112-113 0.002689070465170775 114-115 0.01330129497950544 116-117 0.005778300225753868 118-119 0.004641847826782886 120-121 0.007346924663770154 122-123 0.008307306972759715 124-125 0.05967175413188482 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 3123756.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.66797251119633 #Duplication Level Percentage of deduplicated Percentage of total 1 73.50597139914808 41.654343666557075 2 13.988073961312859 15.853515814485164 3 5.329621534015844 9.060565397540698 4 2.4978206831687935 5.661857352468274 5 1.395524229909959 3.9540764349622988 6 0.814452931681276 2.7692037806506686 7 0.559181508389735 2.2181377642339166 8 0.36168708737887806 1.6396859140192743 9 0.2711975582666275 1.3831394199261133 >10 1.2061496213043386 11.669664197208737 >50 0.05252359885403084 2.0154229479403463 >100 0.01660054490796543 1.5935501522015232 >500 9.676575357883364E-4 0.3788143992359054 >1k 2.276841258232782E-4 0.1480227585699337 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 3.201274363298542E-5 0.0 0.0 0.0 3 0.0 3.201274363298542E-5 0.0 0.0 0.0 4 0.0 3.201274363298542E-5 0.0 0.0 0.0 5 0.0 3.201274363298542E-5 0.0 0.0 0.0 6 0.0 3.201274363298542E-5 0.0 0.0 0.0 7 0.0 3.201274363298542E-5 0.0 0.0 0.0 8 0.0 3.201274363298542E-5 0.0 0.0 0.0 9 0.0 3.201274363298542E-5 0.0 0.0 0.0 10-11 0.0 3.201274363298542E-5 0.0 0.0 0.0 12-13 0.0 3.201274363298542E-5 0.0 3.201274363298542E-5 4.801911544947813E-5 14-15 0.0 3.201274363298542E-5 0.0 3.201274363298542E-5 8.003185908246355E-5 16-17 0.0 3.201274363298542E-5 0.0 3.201274363298542E-5 9.603823089895625E-5 18-19 0.0 3.201274363298542E-5 0.0 9.603823089895625E-5 9.603823089895625E-5 20-21 0.0 3.201274363298542E-5 0.0 1.2805097453194168E-4 1.440573463484344E-4 22-23 0.0 3.201274363298542E-5 0.0 2.2408920543089795E-4 1.600637181649271E-4 24-25 0.0 3.201274363298542E-5 0.0 5.762293853937375E-4 1.600637181649271E-4 26-27 0.0 3.201274363298542E-5 0.0 0.0014085607198513583 1.920764617979125E-4 28-29 0.0 3.201274363298542E-5 0.0 0.0037614973768757866 1.920764617979125E-4 30-31 0.0 3.201274363298542E-5 0.0 0.014213658173045526 1.920764617979125E-4 32-33 0.0 3.201274363298542E-5 0.0 0.038447305103215486 1.920764617979125E-4 34-35 0.0 3.201274363298542E-5 0.0 0.06917953899088149 1.920764617979125E-4 36-37 0.0 3.201274363298542E-5 0.0 0.12049596703455712 1.920764617979125E-4 38-39 0.0 3.201274363298542E-5 0.0 0.20147220205419375 1.920764617979125E-4 40-41 0.0 3.201274363298542E-5 0.0 0.2911719097138189 1.920764617979125E-4 42-43 0.0 3.201274363298542E-5 0.0 0.3796711394872071 2.080828336144052E-4 44-45 0.0 3.201274363298542E-5 0.0 0.4841287219616385 2.2408920543089792E-4 46-47 0.0 3.201274363298542E-5 0.0 0.605649096792451 2.2408920543089792E-4 48-49 0.0 3.201274363298542E-5 0.0 0.7293463381903068 2.2408920543089792E-4 50-51 0.0 3.201274363298542E-5 0.0 0.8505145728411566 2.2408920543089792E-4 52-53 0.0 3.201274363298542E-5 0.0 0.9774931204613933 2.2408920543089792E-4 54-55 0.0 3.201274363298542E-5 0.0 1.121790562387075 2.881146926968688E-4 56-57 0.0 3.201274363298542E-5 0.0 1.2889931223821578 2.881146926968688E-4 58-59 0.0 3.201274363298542E-5 0.0 1.4669679706097405 2.881146926968688E-4 60-61 0.0 3.201274363298542E-5 0.0 1.6460952776081101 2.881146926968688E-4 62-63 0.0 6.402548726597084E-5 0.0 1.8310489039476834 3.201274363298542E-4 64-65 0.0 6.402548726597084E-5 0.0 2.0369228582514127 3.201274363298542E-4 66-67 0.0 6.402548726597084E-5 0.0 2.2743773841490817 3.361338081463469E-4 68-69 0.0 6.402548726597084E-5 0.0 2.535985525117839 3.5214017996283963E-4 70-71 0.0 6.402548726597084E-5 0.0 2.8116632669132926 3.681465517793323E-4 72-73 0.0 6.402548726597084E-5 0.0 3.0883334037613692 3.84152923595825E-4 74-75 0.0 6.402548726597084E-5 0.0 3.386900257254408 3.84152923595825E-4 76-77 0.0 6.402548726597084E-5 0.0 3.724282562402441 3.84152923595825E-4 78-79 0.0 6.402548726597084E-5 0.0 4.090492343191978 3.84152923595825E-4 80-81 0.0 6.402548726597084E-5 0.0 4.475077438826848 4.161656672288104E-4 82-83 0.0 6.402548726597084E-5 0.0 4.873844179891131 4.4817841086179584E-4 84-85 0.0 6.402548726597084E-5 0.0 5.296188306641108 4.4817841086179584E-4 86-87 0.0 6.402548726597084E-5 0.0 5.758260248239619 4.641847826782886E-4 88-89 0.0 6.402548726597084E-5 0.0 6.253081226574675 4.96197526311274E-4 90-91 0.0 6.402548726597084E-5 0.0 6.768518411809373 5.122038981277667E-4 92-93 0.0 6.402548726597084E-5 0.0 7.295640248470111 5.442166417607521E-4 94-95 0.0 6.402548726597084E-5 0.0 7.843698419466821 5.442166417607521E-4 96-97 0.0 6.402548726597084E-5 0.0 8.431004214157571 5.442166417607521E-4 98-99 0.0 6.402548726597084E-5 0.0 9.059862550083938 5.762293853937376E-4 100-101 0.0 6.402548726597084E-5 0.0 9.738628753334126 5.762293853937376E-4 102-103 0.0 6.402548726597084E-5 0.0 10.41542617285089 5.762293853937376E-4 104-105 0.0 6.402548726597084E-5 0.0 11.098017898965221 5.762293853937376E-4 106-107 0.0 8.003185908246355E-5 0.0 11.821697981532488 6.08242129026723E-4 108-109 0.0 9.603823089895625E-5 0.0 12.581088279622353 6.402548726597084E-4 110-111 0.0 9.603823089895625E-5 0.0 13.383423673295866 6.722676162926938E-4 112-113 0.0 9.603823089895625E-5 0.0 14.185198843955803 6.722676162926938E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 6465 0.0 33.78029 1 GGTATCA 4670 0.0 31.855831 1 TCAACGC 7555 0.0 28.195036 4 CAACGCA 7670 0.0 27.693832 5 GTACATG 11650 0.0 27.327108 1 AACGCAG 7810 0.0 27.273146 6 ATCAACG 8070 0.0 26.690649 3 TACATGG 11625 0.0 26.461939 2 TATCAAC 8310 0.0 26.27781 2 ACATGGG 11930 0.0 25.635794 3 CATGGGG 7915 0.0 25.033258 4 ACGCAGA 9030 0.0 23.456247 7 CGCAGAG 9300 0.0 22.519 8 GCAGAGT 10330 0.0 19.467299 9 GTATAGC 1170 0.0 19.32696 1 AGAGTAC 9400 0.0 18.03889 10-11 ATATAGG 1010 0.0 17.086079 1 ATGGGGG 4365 0.0 17.038681 5 ATACGGC 350 6.9887756E-7 16.999464 6 GTTCGCG 350 6.98994E-7 16.999191 7 >>END_MODULE