##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920978_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3186809 Sequences flagged as poor quality 0 Sequence length 125 %GC 47 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.336118669176596 31.0 28.0 33.0 16.0 34.0 2 28.343854934512862 31.0 28.0 34.0 16.0 34.0 3 28.361281143614193 31.0 28.0 34.0 16.0 34.0 4 31.721581996285312 35.0 32.0 37.0 17.0 37.0 5 31.824269669126704 35.0 32.0 37.0 18.0 37.0 6 31.769709135376484 35.0 32.0 37.0 17.0 37.0 7 31.615441653390587 35.0 32.0 37.0 17.0 37.0 8 31.605961951281046 35.0 32.0 37.0 17.0 37.0 9 32.71084994425458 37.0 32.0 39.0 16.0 39.0 10-11 32.673370917428684 37.0 32.0 39.0 16.0 39.0 12-13 32.64442001387595 37.0 32.0 39.0 15.0 39.0 14-15 33.545750623899956 38.0 32.0 40.0 14.0 41.0 16-17 33.436216917926366 38.0 32.0 40.0 12.0 41.0 18-19 33.554252231621035 38.0 32.0 40.5 13.0 41.0 20-21 33.57177979602794 38.0 32.0 40.5 13.0 41.0 22-23 33.52477289978785 38.0 32.0 40.0 13.0 41.0 24-25 33.45165618648623 38.0 32.0 40.5 12.0 41.0 26-27 33.30321381042918 38.0 32.0 40.0 10.0 41.0 28-29 33.22329891750651 38.0 32.0 40.0 10.0 41.0 30-31 33.08896030480647 38.0 32.0 40.0 9.0 41.0 32-33 32.97620990150335 38.0 31.5 40.0 9.0 41.0 34-35 32.79178215575517 38.0 31.0 40.0 8.0 41.0 36-37 32.64131581152181 38.0 31.0 40.0 7.5 41.0 38-39 32.51283666514058 38.0 31.0 40.0 2.0 41.0 40-41 32.42259796555112 38.0 31.0 40.0 2.0 41.0 42-43 32.19972753309031 38.0 30.0 40.0 2.0 41.0 44-45 32.03471685940387 38.0 30.0 40.0 2.0 41.0 46-47 31.828704512884205 37.0 30.0 40.0 2.0 41.0 48-49 31.65820072680854 37.0 30.0 40.0 2.0 41.0 50-51 31.422938745309178 37.0 30.0 40.0 2.0 41.0 52-53 31.235864778843037 37.0 29.5 40.0 2.0 41.0 54-55 31.01428890153128 36.0 29.0 40.0 2.0 41.0 56-57 30.806544257908143 36.0 29.0 40.0 2.0 41.0 58-59 30.533499968149957 35.5 28.5 39.0 2.0 41.0 60-61 30.333790007496525 35.0 28.5 39.0 2.0 41.0 62-63 30.206243769237503 35.0 28.0 39.0 2.0 41.0 64-65 29.966775699453592 35.0 28.0 39.0 2.0 40.5 66-67 29.698616547147946 35.0 28.0 38.5 2.0 40.0 68-69 29.39209692203078 35.0 28.0 38.0 2.0 40.0 70-71 29.061292189145945 34.0 28.0 37.0 2.0 40.0 72-73 28.77664946346016 34.0 27.5 36.5 2.0 39.0 74-75 28.475490372971834 34.0 27.0 36.0 2.0 39.0 76-77 28.195194315065635 34.0 26.5 36.0 2.0 38.5 78-79 27.88357397635064 34.0 26.0 35.0 2.0 37.0 80-81 27.573183865113975 34.0 26.0 35.0 2.0 37.0 82-83 27.314661782365995 33.5 26.0 35.0 2.0 36.5 84-85 27.08228419086302 33.0 25.5 35.0 2.0 36.0 86-87 27.01715415012321 33.0 25.5 35.0 2.0 36.0 88-89 27.110852266326596 34.0 26.0 35.0 2.0 35.5 90-91 27.0289011672805 34.0 26.0 35.0 2.0 35.0 92-93 26.878741399311977 34.0 25.0 35.0 2.0 35.0 94-95 26.798364602334182 34.0 25.0 35.0 2.0 35.0 96-97 26.703337413695017 34.0 25.0 35.0 2.0 35.0 98-99 26.63887873418206 33.5 25.0 35.0 2.0 35.0 100-101 26.46469524844445 33.0 25.0 35.0 2.0 35.0 102-103 25.172785849418652 31.5 21.5 34.0 2.0 35.0 104-105 26.15687008540518 33.0 24.0 35.0 2.0 35.0 106-107 26.338503970586252 33.0 24.0 35.0 2.0 35.0 108-109 26.327670563249946 33.0 24.0 35.0 2.0 35.0 110-111 26.22058146566048 33.0 24.0 35.0 2.0 35.0 112-113 26.122686518081252 33.0 24.0 35.0 2.0 35.0 114-115 25.978879656734996 33.0 23.5 35.0 2.0 35.0 116-117 25.838520601642585 33.0 23.0 35.0 2.0 35.0 118-119 25.639461919431007 33.0 20.0 35.0 2.0 35.0 120-121 25.419001891861107 33.0 18.5 35.0 2.0 35.0 122-123 25.18231011020742 33.0 10.0 35.0 2.0 35.0 124-125 24.043743129883218 31.5 2.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 200051.0 3 27255.0 4 17223.0 5 16232.0 6 19278.0 7 20609.0 8 21086.0 9 22215.0 10 23103.0 11 23828.0 12 23875.0 13 24224.0 14 24887.0 15 22224.0 16 18573.0 17 16729.0 18 15634.0 19 15033.0 20 15196.0 21 16644.0 22 19688.0 23 26516.0 24 35896.0 25 45700.0 26 53564.0 27 59876.0 28 69652.0 29 81404.0 30 94801.0 31 113184.0 32 138631.0 33 171713.0 34 221134.0 35 302243.0 36 460561.0 37 555108.0 38 153077.0 39 162.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.30693450029491 18.31855954200462 12.31666169132209 25.057844266378382 2 16.199897684724583 20.105234085423838 38.53108532654579 25.163782903305787 3 19.379921602746446 24.233501910340635 28.70868631400143 27.677890172911486 4 13.251466580543998 15.818794640433149 35.354736574169536 35.57500220485331 5 14.122083980361314 37.73128242724309 33.821277167329285 14.325356425066312 6 34.034570430300874 35.32862369118204 16.599668492406142 14.037137386110949 7 29.15990410021778 32.13650028556545 20.537616187481564 18.165979426735202 8 26.869328248749618 35.40406059575238 19.290057885675946 18.436553269822063 9 26.821818930379493 16.144944063157123 18.636472183458913 38.396764823004474 10-11 25.523534209339626 26.20241136563404 27.05808811046303 21.21596631456331 12-13 25.947076620653753 23.624374680102644 27.04768043623094 23.380868263012662 14-15 23.232999490386376 25.00988474698813 24.33114781054423 27.42596795208126 16-17 23.47275119581941 28.024254980109685 25.232252401915822 23.270741422155083 18-19 23.56702638391984 27.09144587759195 26.662631281421522 22.678896457066685 20-21 24.42409697080765 26.3208450395724 26.266933317350194 22.988124672269763 22-23 24.010244185085057 26.06421176713134 26.11907900238595 23.80646504539766 24-25 23.67744033880121 26.2381715880883 26.306297090262838 23.778090982847655 26-27 23.613529971802098 26.368254045956363 26.27515013672185 23.743065845519684 28-29 23.60508718464964 26.536414396838627 26.364152284163605 23.494346134348127 30-31 23.828232867908802 26.3963363508106 26.14081100349947 23.634619777781126 32-33 23.618347321465976 26.419943338295976 26.08934612795215 23.872363212285897 34-35 23.862638761860335 26.4332468937694 26.177223229820818 23.526891114549446 36-37 23.91224870346648 26.220825249939278 26.211379368563225 23.655546678031016 38-39 23.80110579414606 26.377092466500844 26.159285004092713 23.66251673526038 40-41 23.82571801228612 26.401165570179053 26.15930599245348 23.613810425081347 42-43 23.83617001814242 26.319953946529207 26.113943428852863 23.729932606475508 44-45 23.72267056947388 26.41726753705795 26.07731474479143 23.782747148676748 46-47 23.692816662748754 26.491508278929803 26.049589780495452 23.766085277825987 48-49 23.682857459797592 26.539181292605544 26.000821848556754 23.77713939904011 50-51 23.665959203553236 26.618380713904866 25.96073187440903 23.754928208132867 52-53 23.798687284724092 26.44121988098546 25.828433231500338 23.931659602790113 54-55 23.714751339546766 26.419324932130312 25.87341775329558 23.992505975027342 56-57 23.74481121588527 26.49644165160585 25.78786284617978 23.970884286329095 58-59 23.724458454511435 26.279472070131227 25.942921878272983 24.05314759708435 60-61 23.737749024330775 26.30972826235327 26.03506290191343 23.91745981140252 62-63 23.624629238194032 26.348593847162423 26.10057983435501 23.926197080288535 64-65 23.70333269470271 26.30237104564859 25.978505293651622 24.015790965997077 66-67 23.68163494055335 26.42353302223825 25.854421055307082 24.04041098190132 68-69 23.866356312560164 26.134608640804345 25.975948341260857 24.023086705374634 70-71 23.653982539712427 26.09710480565859 26.048746963905785 24.200165690723203 72-73 23.830153477285958 26.15818783510881 25.968196732115366 24.04346195548986 74-75 23.70777390254078 26.201012721861417 25.99021858732 24.10099478827781 76-77 23.837165607888736 25.986990281543566 26.115537307899235 24.060306802668467 78-79 23.902475072529754 26.082737345399167 25.97654916984789 24.038238412223187 80-81 23.83930696622148 26.00014215401619 26.058792453410433 24.101758426351903 82-83 23.787584815795608 26.096011653218838 26.06488284805974 24.05152068292582 84-85 23.86458096351327 26.095629594182206 25.86429854633603 24.175490895968498 86-87 23.859592027339822 25.86159145334042 26.08937098422067 24.18944553509909 88-89 23.772118128196578 25.884529006915695 26.080712712936354 24.262640151951373 90-91 23.71837827533484 25.96041317406138 26.116714533500378 24.204494017103404 92-93 23.778383971994767 25.876422680032228 26.130176939148093 24.215016408824912 94-95 23.601177176483585 25.805150806123628 26.258030482569556 24.335641534823235 96-97 23.74123047121081 25.75696882658358 26.209776433010788 24.29202426919482 98-99 23.746586470459484 25.845641390531316 26.0499706991489 24.357801439860296 100-101 23.529953598872687 25.890840445714446 26.165182991797813 24.41402296361505 102-103 23.435859077743736 25.753840616174372 26.380926423762514 24.42937388231938 104-105 23.412072650679047 25.99975961772314 26.10722555859851 24.480942172999296 106-107 23.284747107454617 26.08874134025297 26.140855175322802 24.485656376969608 108-109 23.36716139872324 26.083647732030002 26.15712947033522 24.392061398911537 110-111 23.294150730540792 26.212751693966123 26.09217052537391 24.400927050119176 112-113 23.343710240314227 26.297323881409856 26.048133764978353 24.31083211329756 114-115 23.341655738638707 26.307530633915587 26.041429164802608 24.30938446264309 116-117 23.287176014344897 26.295393452284195 26.08765099769726 24.329779535673648 118-119 23.330345365278703 26.136833455744313 26.0072153701537 24.525605808823286 120-121 23.34332370385259 26.248690401602854 26.01334319346972 24.39464270107484 122-123 23.381385892653974 26.280340261891755 25.96134277699785 24.37693106845642 124-125 23.378504774131805 26.389970790997864 25.751504641948745 24.48001979292158 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1229.0 1 935.5 2 574.0 3 449.0 4 358.0 5 300.5 6 298.5 7 369.5 8 466.0 9 522.5 10 518.5 11 535.5 12 605.5 13 662.0 14 750.0 15 884.5 16 998.0 17 1148.0 18 1373.0 19 1625.5 20 2009.0 21 2603.5 22 3310.0 23 4097.5 24 5173.0 25 6804.5 26 9214.5 27 12430.5 28 15617.5 29 19100.5 30 23922.5 31 29422.5 32 35347.0 33 40379.5 34 44240.5 35 49708.0 36 56922.5 37 63118.5 38 68280.5 39 72939.0 40 78937.0 41 85391.5 42 91025.0 43 98593.5 44 105458.0 45 110579.0 46 116378.0 47 121370.0 48 126191.5 49 130966.0 50 134474.0 51 136108.0 52 134022.0 53 131343.5 54 128550.5 55 123656.0 56 116147.5 57 106481.5 58 97513.5 59 87328.5 60 74475.0 61 61577.0 62 50107.0 63 38892.5 64 28784.5 65 21635.5 66 16473.0 67 12845.5 68 9917.5 69 7579.5 70 5976.5 71 4587.5 72 3535.5 73 2953.5 74 2338.5 75 1749.0 76 1290.0 77 871.0 78 591.5 79 398.5 80 277.5 81 187.5 82 137.0 83 105.0 84 69.5 85 49.5 86 43.5 87 36.5 88 25.5 89 18.5 90 16.0 91 16.5 92 17.5 93 14.5 94 9.5 95 6.5 96 7.5 97 7.5 98 8.0 99 11.5 100 14.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.034517286727883595 2 0.018168644559495094 3 0.022844167943544783 4 0.020584854630446944 5 0.013963811449007454 6 0.004863799493474506 7 0.004675523384049687 8 0.005742421337456998 9 0.0028241416413722943 10-11 0.0047069027356204905 12-13 0.007531044376992785 14-15 0.002541727477235065 16-17 0.002573106828805868 18-19 1.5689675785401636E-5 20-21 0.0037027634853547863 22-23 8.001734650554834E-4 24-25 0.0013650017933299421 26-27 0.0014748295238277537 28-29 0.0029967280750117123 30-31 0.001286553414402934 32-33 1.5689675785401636E-5 34-35 0.005946387122667219 36-37 0.007374147619138768 38-39 0.001553277902754762 40-41 0.001333622441759139 42-43 0.002463279098308057 44-45 0.0013493121175445406 46-47 0.018451058723632324 48-49 0.002839831317157696 50-51 0.0096020815806658 52-53 0.0017415540121795815 54-55 1.0982773049781144E-4 56-57 2.3534513678102453E-4 58-59 0.006636732857224891 60-61 6.903457345576719E-4 62-63 0.009272598389172366 64-65 0.009523633201738792 66-67 6.275870314160654E-5 68-69 0.0039694879737066134 70-71 0.004675523384049687 72-73 0.010794496940356325 74-75 0.0015846572543255651 76-77 0.0011767256839051226 78-79 4.236212462058442E-4 80-81 0.003906729270565007 82-83 0.0015689675785401636 84-85 0.0010668979534073112 86-87 0.01237915419468189 88-89 0.0 90-91 5.17759300918254E-4 92-93 0.008205700435765056 94-95 0.006307249665731457 96-97 0.004251902137843843 98-99 0.0013022430901883356 100-101 0.014560019128852719 102-103 0.007640872107490596 104-105 0.006840698642435113 106-107 0.016160366058963687 108-109 0.009507943525953392 110-111 0.017996058125855675 112-113 0.0026829345593036794 114-115 0.013508810851230808 116-117 0.005365869118607359 118-119 0.004377419544127056 120-121 0.007546734052778187 122-123 0.008268459138906663 124-125 0.05748697207771159 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 3186809.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.70117772553908 #Duplication Level Percentage of deduplicated Percentage of total 1 69.81754851067217 33.3037928986902 2 13.522847547175054 12.901115084063349 3 5.968162406031884 8.540651268750235 4 3.2622022210646113 6.224435516946055 5 1.932166143586674 4.608330030524871 6 1.2637608740865045 3.6169729234429777 7 0.8261604771752676 2.7586179426087534 8 0.6364939984745527 2.4289210673978916 9 0.46609154594248897 2.000980410243654 >10 2.1861211576650263 17.739895254181697 >50 0.08630578815462084 2.767827446943401 >100 0.030807883668982447 2.4856975874204386 >500 9.320124119151775E-4 0.2960591215407133 >1k 3.994338901901035E-4 0.3267034472457628 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 2.1965546099562288E-4 0.0 0.0 0.0 0.0 3 2.1965546099562288E-4 0.0 0.0 0.0 0.0 4 2.1965546099562288E-4 0.0 0.0 0.0 0.0 5 5.020696251328523E-4 0.0 0.0 0.0 0.0 6 8.472424924116884E-4 0.0 0.0 0.0 0.0 7 0.0017886230395357864 0.0 0.0 0.0 0.0 8 0.001851381742677393 0.0 0.0 0.0 0.0 9 0.0018827610942481962 0.0 0.0 0.0 0.0 10-11 0.002055347527887614 0.0 0.0 1.5689675785401636E-5 0.0 12-13 0.0026672448835182777 0.0 0.0 6.275870314160654E-5 0.0 14-15 0.0032006938602219337 0.0 0.0 6.275870314160654E-5 0.0 16-17 0.0033732802938613517 0.0 0.0 1.4120708206861473E-4 0.0 18-19 0.0042989711652000485 0.0 0.0 1.8827610942481963E-4 0.0 20-21 0.00498931689975772 0.0 0.0 2.5103481256642617E-4 0.0 22-23 0.005428627821748966 0.0 0.0 7.060354103430736E-4 0.0 24-25 0.007185871509713949 0.0 0.0 0.0013806914691153439 0.0 26-27 0.007248630212855555 0.0 0.0 0.0020082785005314093 0.0 28-29 0.00902156357660594 0.0 0.0 0.005820869716384007 0.0 30-31 0.00997863379951544 0.0 0.0 0.01832554131734911 0.0 32-33 0.010135530557369456 0.0 0.0 0.04490385209781948 0.0 34-35 0.011437773647557792 0.0 0.0 0.0805664851580374 0.0 36-37 0.013210707011308177 0.0 0.0 0.14064225374034026 0.0 38-39 0.015077778429770972 1.5689675785401636E-5 0.0 0.23131289010417633 0.0 40-41 0.015218985511839585 3.137935157080327E-5 0.0 0.331773884158103 0.0 42-43 0.016552607953598725 3.137935157080327E-5 0.0 0.42550400730009236 0.0 44-45 0.018137265207924292 3.137935157080327E-5 0.0 0.5333548386489433 0.0 46-47 0.02082019976722797 3.137935157080327E-5 0.0 0.6609432821358293 0.0 48-49 0.021840028693279077 3.137935157080327E-5 0.0 0.7924855239206365 0.0 50-51 0.021840028693279077 3.137935157080327E-5 0.0 0.9315117410550805 0.0 52-53 0.021871408044849883 3.137935157080327E-5 0.0 1.071228303924082 0.0 54-55 0.022043994478489298 3.137935157080327E-5 0.0 1.220688155455818 0.0 56-57 0.02322072016239442 3.137935157080327E-5 0.0 1.3920507943839748 0.0 58-59 0.02331485821710683 3.137935157080327E-5 0.0 1.578161728550409 0.0 60-61 0.023456065299175446 3.137935157080327E-5 0.0 1.773796295918582 0.0 62-63 0.023722789787527274 3.137935157080327E-5 0.0 1.9662458591023184 0.0 64-65 0.02387968654538129 3.137935157080327E-5 0.0 2.1708235416681703 0.0 66-67 0.02529175736606744 3.137935157080327E-5 0.0 2.4149078278616636 0.0 68-69 0.025793826991200287 3.137935157080327E-5 0.0 2.6860568047849744 0.0 70-71 0.02632727596790394 3.137935157080327E-5 0.0 2.9748252876152916 0.0 72-73 0.02697055267510541 3.137935157080327E-5 0.0 3.2660884288954874 0.0 74-75 0.027394173921311257 3.137935157080327E-5 0.0 3.5626076115637932 0.0 76-77 0.027504001651809065 3.137935157080327E-5 0.0 3.8930478732801372 0.0 78-79 0.027598139706521477 3.137935157080327E-5 0.0 4.261394391694012 0.0 80-81 0.03109693740666604 3.137935157080327E-5 0.0 4.651941801344229 0.0 82-83 0.03147348962551568 6.275870314160654E-5 0.0 5.052122671926683 0.0 84-85 0.03219521471164416 6.275870314160654E-5 0.0 5.461011312570035 1.5689675785401636E-5 86-87 0.03307383655562665 6.275870314160654E-5 0.0 5.904636895402266 3.137935157080327E-5 88-89 0.03319935396190986 6.275870314160654E-5 0.0 6.399175476158126 3.137935157080327E-5 90-91 0.03534883954450989 6.275870314160654E-5 0.0 6.926081858059269 3.137935157080327E-5 92-93 0.03613332333377997 6.275870314160654E-5 0.0 7.455969278359638 3.137935157080327E-5 94-95 0.03616470268535077 1.2551740628321308E-4 0.0 8.001420857039125 3.137935157080327E-5 96-97 0.036211771712706974 1.8827610942481963E-4 0.0 8.56817901543519 3.137935157080327E-5 98-99 0.037655221884963924 1.8827610942481963E-4 0.0 9.176514814662568 3.137935157080327E-5 100-101 0.03922418946350409 1.8827610942481963E-4 0.0 9.83491636932116 3.137935157080327E-5 102-103 0.04095005379989827 1.8827610942481963E-4 0.0 10.508458461112667 3.137935157080327E-5 104-105 0.04548437010187934 1.8827610942481963E-4 0.0 11.176195372863576 4.7069027356204907E-5 106-107 0.04686506157099468 1.8827610942481963E-4 0.0 11.871828528160929 6.275870314160654E-5 108-109 0.04732006216877133 1.8827610942481963E-4 0.0 12.59673861847384 6.275870314160654E-5 110-111 0.04785351114547499 1.8827610942481963E-4 0.0 13.358425308827734 6.275870314160654E-5 112-113 0.04832420141903704 1.8827610942481963E-4 0.0 14.153750664065527 6.275870314160654E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 8340 0.0 33.96616 1 GTACATG 13835 0.0 30.756186 1 TACATGG 13775 0.0 30.021376 2 TCAACGC 9535 0.0 28.267958 4 CAACGCA 9580 0.0 28.133852 5 CATGGGG 8860 0.0 27.936796 4 ACATGGG 14315 0.0 27.932858 3 TATCAAC 10075 0.0 27.69907 2 AACGCAG 9755 0.0 27.689703 6 ATCAACG 9940 0.0 27.356922 3 GTATAGG 840 0.0 25.505203 1 GGTATCA 6160 0.0 24.925539 1 ACGCAGA 11090 0.0 24.088207 7 CGCAGAG 11015 0.0 23.982153 8 GCAGAGT 12290 0.0 19.848227 9 ATGGGGG 5310 0.0 19.160116 5 GTATATA 1525 0.0 19.121933 1 AGAGTAC 11160 0.0 17.539806 10-11 ATGGGGA 4910 0.0 17.085754 5 CATGGGT 2385 0.0 16.964361 4 >>END_MODULE