##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920959_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2771043 Sequences flagged as poor quality 0 Sequence length 125 %GC 47 >>END_MODULE >>Per base sequence quality warn #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.585414228505297 31.0 30.0 34.0 26.0 34.0 2 29.608892030906773 31.0 30.0 34.0 26.0 34.0 3 29.742959239535438 31.0 30.0 34.0 26.0 34.0 4 33.273308642269356 35.0 33.0 37.0 28.0 37.0 5 32.76297661205546 35.0 33.0 37.0 26.0 37.0 6 32.51299853520858 35.0 33.0 37.0 25.0 37.0 7 32.32959394711666 35.0 32.0 37.0 23.0 37.0 8 32.241827716134324 35.0 32.0 37.0 23.0 37.0 9 33.48431583342445 37.0 33.0 39.0 22.0 39.0 10-11 33.38344767656078 37.0 33.0 39.0 21.5 39.0 12-13 33.25658641890436 37.0 32.5 39.0 20.0 39.0 14-15 34.07059796618096 38.0 33.0 40.0 18.0 41.0 16-17 34.05158653257997 38.0 33.0 40.0 18.5 41.0 18-19 34.093215442705144 38.0 33.0 40.0 18.5 41.0 20-21 34.07067627604479 38.0 33.0 40.0 18.0 41.0 22-23 34.036450535051245 38.0 33.0 40.0 18.0 41.0 24-25 34.00466304564743 38.0 33.0 40.0 18.0 41.0 26-27 33.83861997089183 38.0 32.5 40.0 18.0 41.0 28-29 33.70420830712479 38.0 32.0 40.0 17.0 41.0 30-31 33.50953359439028 38.0 32.0 40.0 16.0 41.0 32-33 33.348161324093496 38.0 32.0 40.0 15.5 41.0 34-35 33.19337177373285 38.0 32.0 40.0 14.0 41.0 36-37 33.02077232291235 38.0 32.0 40.0 9.0 41.0 38-39 32.862852001935735 38.0 31.0 40.0 9.0 41.0 40-41 32.64703488902915 38.0 31.0 40.0 8.0 41.0 42-43 32.4672273219867 38.0 31.0 40.0 7.5 41.0 44-45 32.20710974171097 37.5 30.5 40.0 2.0 41.0 46-47 32.02529805564187 37.0 30.5 40.0 2.0 41.0 48-49 31.782891135215152 37.0 30.0 40.0 2.0 41.0 50-51 31.559901632706527 37.0 30.0 40.0 2.0 41.0 52-53 31.30344476790869 36.5 30.0 40.0 2.0 41.0 54-55 31.09915526392048 36.0 29.0 40.0 2.0 41.0 56-57 30.94381916845029 36.0 29.0 40.0 2.0 41.0 58-59 30.86218510503085 36.0 29.0 39.5 2.0 41.0 60-61 30.58204979136015 35.0 29.0 39.0 2.0 41.0 62-63 30.31821447736466 35.0 28.5 39.0 2.0 41.0 64-65 30.044649613881848 35.0 28.0 39.0 2.0 40.5 66-67 29.729738224921086 35.0 28.0 38.0 2.0 40.0 68-69 29.41637679386426 35.0 28.0 37.5 2.0 40.0 70-71 29.072219557762185 34.0 28.0 37.0 2.0 39.5 72-73 28.801429100883674 34.0 28.0 36.5 2.0 39.0 74-75 28.553325769394412 34.0 27.0 36.0 2.0 39.0 76-77 28.241077096241376 34.0 27.0 35.5 2.0 38.5 78-79 27.933098295479354 34.0 26.0 35.0 2.0 37.0 80-81 27.69117188004661 34.0 26.0 35.0 2.0 37.0 82-83 27.451912330483502 34.0 26.0 35.0 2.0 36.0 84-85 27.264511413211558 34.0 26.0 35.0 2.0 36.0 86-87 27.04800827702782 33.0 25.5 35.0 2.0 36.0 88-89 26.923121005339866 33.0 25.0 35.0 2.0 35.0 90-91 26.737258317536032 33.0 25.0 35.0 2.0 35.0 92-93 26.8819071014055 33.0 25.0 35.0 2.0 35.0 94-95 26.824404384919326 33.5 25.0 35.0 2.0 35.0 96-97 26.760032052912926 33.0 25.0 35.0 2.0 35.0 98-99 26.703277249757583 33.5 25.0 35.0 2.0 35.0 100-101 26.563186677363 33.0 25.0 35.0 2.0 35.0 102-103 25.268123591008873 31.5 21.5 34.0 2.0 35.0 104-105 26.31988605012625 33.0 24.5 35.0 2.0 35.0 106-107 26.510295762281565 33.5 25.0 35.0 2.0 35.0 108-109 26.48262170597858 34.0 25.0 35.0 2.0 35.0 110-111 26.411916379500425 34.0 25.0 35.0 2.0 35.0 112-113 26.29419590385281 33.5 24.0 35.0 2.0 35.0 114-115 26.188194842158712 33.0 24.0 35.0 2.0 35.0 116-117 26.04567738573526 33.0 24.0 35.0 2.0 35.0 118-119 25.90141834681021 33.0 23.0 35.0 2.0 35.0 120-121 25.746201881385456 33.0 22.5 35.0 2.0 35.0 122-123 25.490671743455444 33.0 18.5 35.0 2.0 35.0 124-125 24.372673394097458 32.0 8.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 115901.0 3 35624.0 4 17644.0 5 14114.0 6 15773.0 7 18661.0 8 20632.0 9 21637.0 10 23275.0 11 23911.0 12 24815.0 13 26227.0 14 27713.0 15 22666.0 16 17495.0 17 15614.0 18 14816.0 19 14232.0 20 14006.0 21 14556.0 22 16621.0 23 21288.0 24 28655.0 25 37505.0 26 45193.0 27 53007.0 28 61936.0 29 72636.0 30 85130.0 31 100693.0 32 121922.0 33 149598.0 34 190259.0 35 261660.0 36 404258.0 37 489413.0 38 131670.0 39 287.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.63486068938626 19.287217795364857 13.11754660235187 24.960374912897016 2 16.320532710317472 21.054320097494188 37.30762165932826 25.31752553286008 3 18.874105863973316 25.10069574889091 29.68551457232862 26.33968381480716 4 13.44077552037981 16.546470161036822 35.091393906109424 34.92136041247394 5 13.67975586559614 37.96077030107143 33.98264999882697 14.376823834505458 6 33.269661331835906 36.0830062519578 16.444698827703778 14.20263358850252 7 28.332252449672147 32.44520425092236 21.108124094827602 18.114419204577896 8 27.13085156104788 34.7823952850056 19.683549671837977 18.403203482108538 9 26.989979219179723 14.96179353964473 19.18213737432513 38.86608986685042 10-11 25.70093584443921 25.78870002355177 27.23786474787425 21.272499384134772 12-13 26.174323076140105 23.169444192786095 27.595324472633386 23.06090825844041 14-15 23.509141774208103 24.428445086183554 25.110008122010647 26.95240501759769 16-17 23.237328143453816 27.33060373685044 26.07854891315237 23.35351920654338 18-19 23.34090686327158 26.119490410402047 27.98899765321055 22.550605073115822 20-21 24.37275442293407 25.327221681996328 27.567871743394385 22.732152151675216 22-23 23.79854630234406 25.090461302559735 27.56219490911637 23.54879748597983 24-25 23.48023731893278 25.471863946963108 27.665714113488466 23.382184620615647 26-27 23.218164942205853 25.56043096510911 27.734404820537385 23.486999272147653 28-29 23.350092754634886 25.613832830141618 27.818991030981437 23.217083384242056 30-31 23.59723703180171 25.579149812623225 27.534260964483238 23.289352191091826 32-33 23.19015856021964 25.81692245106876 27.34800118540251 23.64491780330909 34-35 23.447382627449258 25.771992739282148 27.4911158724151 23.28950876085349 36-37 23.782579549856127 25.33648523327537 27.44049937531158 23.440435841556923 38-39 23.627704521301172 25.587363402180944 27.309022964605862 23.47590911191202 40-41 23.551998665745156 25.66951453303517 27.409803776814833 23.36868302440484 42-43 23.7516645976141 25.479344550137196 27.14435729836484 23.62463355388387 44-45 23.61979893796186 25.65339567210705 27.025984576423806 23.700820813507278 46-47 23.74928970760141 25.738000119856203 26.875153881644167 23.63755629089822 48-49 23.70568661115114 25.947491765806692 26.59718441849484 23.749637204547327 50-51 23.505779654115926 26.14459675253609 26.626745952220755 23.722877641127226 52-53 23.859941834955016 25.91281091162238 26.45500601847398 23.772241234948627 54-55 23.621027803077148 26.01287434196063 26.35355851158109 24.012539343381125 56-57 23.603729128332947 26.16708523554313 26.28468759841934 23.944498037704587 58-59 23.369950226702507 25.857911196438028 26.591217685123837 24.18092089173563 60-61 23.426833464083813 26.062048292596106 26.656292070455795 23.85482617286429 62-63 23.196945208320884 26.113074734405384 26.70897357692572 23.98100648034801 64-65 23.136099822951596 26.017974167684766 26.633058518396567 24.212867490967067 66-67 23.22033463864088 26.224732154428942 26.455348120721755 24.09958508620842 68-69 23.635635441233987 25.793212962142402 26.470050481249523 24.101101115374085 70-71 23.261445600456305 25.84480119564197 26.6548558514978 24.238897352403917 72-73 23.504009068690273 25.881670198594207 26.394076470142274 24.22024426257324 74-75 23.376659472715506 26.04782443438326 26.280102787231947 24.29541330566929 76-77 23.289433695026794 25.87190478493665 26.44496308589901 24.393698434137548 78-79 23.432259242954807 26.12668126125707 26.27517210372014 24.165887392067987 80-81 23.394551212866983 26.106130643543953 26.135639252116498 24.36367889147257 82-83 23.331344184483267 26.008662725191684 26.235068297118914 24.424924793206134 84-85 23.249063332442987 26.09221934263624 26.061827277780587 24.596890047140185 86-87 23.213403536904075 25.953270500042507 26.179486952709336 24.653839010344083 88-89 23.179985585688353 26.027669485934673 25.986372284524002 24.80597264385297 90-91 23.052478175156843 26.025234258550974 26.14253951900331 24.779748047288873 92-93 23.143069186131296 25.998547462318488 26.10055719114443 24.757826160405784 94-95 22.86864229285785 25.967492965484084 26.3147113651175 24.84915337654057 96-97 23.107676204398004 25.68856645281214 26.253286772601353 24.9504705701885 98-99 23.051433563025878 25.83232564603284 26.01629024281955 25.09995054812173 100-101 22.800567787532678 25.96752637928965 26.203539016442555 25.028366816735115 102-103 22.829697248738 25.750272397263775 26.19695517885089 25.223075175147336 104-105 22.748356950709876 25.942969968948333 25.918948015301137 25.389725065040658 106-107 22.62361332478662 26.009742819029142 26.001170841851174 25.365473014333066 108-109 22.61666263920679 25.99422464058304 26.020825727329477 25.36828699288069 110-111 22.507435125048524 26.19192557782278 25.939061843239646 25.36157745388905 112-113 22.42638891670984 26.43379717027524 25.821405362953353 25.318408550061566 114-115 22.368437911739182 26.488604349788435 25.70456181521926 25.438395923253125 116-117 22.29686101988792 26.357132209925588 25.82430214709257 25.52170462309392 118-119 22.284484018670238 26.26138333428973 25.696443697134463 25.75768894990557 120-121 22.130294111809043 26.54424488926823 25.740314015197313 25.585146983725416 122-123 22.06783457063596 26.555109137778526 25.586000020931472 25.79105627065404 124-125 21.995614411236062 26.77668253410838 25.53154726063198 25.69615579402357 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 141.0 1 126.0 2 239.0 3 448.0 4 387.5 5 282.0 6 408.5 7 777.5 8 1169.0 9 1208.0 10 957.5 11 750.5 12 758.5 13 825.0 14 922.0 15 1079.5 16 1227.5 17 1377.5 18 1607.5 19 1841.5 20 2156.0 21 2634.0 22 3205.0 23 3899.5 24 4869.0 25 6355.0 26 8842.0 27 12258.5 28 14890.5 29 17540.5 30 21242.5 31 25754.5 32 31808.5 33 36570.5 34 39769.0 35 43670.5 36 49626.5 37 55291.5 38 60029.5 39 64291.0 40 68424.0 41 73154.5 42 76898.0 43 82938.0 44 90064.5 45 96204.0 46 102581.5 47 106620.5 48 110558.0 49 116729.0 50 123111.0 51 123234.0 52 118146.0 53 115563.5 54 113375.5 55 107382.5 56 97834.0 57 89045.5 58 82168.5 59 74350.5 60 63907.0 61 53350.0 62 43010.0 63 31392.0 64 22173.5 65 16880.5 66 12860.0 67 9435.5 68 6884.0 69 4964.5 70 3808.0 71 2975.5 72 2359.5 73 2242.5 74 1815.0 75 1271.0 76 892.5 77 539.0 78 296.5 79 156.0 80 93.0 81 60.5 82 35.0 83 17.0 84 10.0 85 8.0 86 8.5 87 7.0 88 7.5 89 6.5 90 2.5 91 2.5 92 2.5 93 3.5 94 3.0 95 2.5 96 6.0 97 4.0 98 0.5 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.04810463063907706 2 2.165249691181263E-4 3 0.002598299629417515 4 0.12100137024217957 5 0.01580632274562322 6 0.0025622121345644944 7 0.0058461741661894094 8 0.011114948414730482 9 0.025261246397114735 10-11 0.019866165916588085 12-13 0.019198547261807197 14-15 0.028617383418445688 16-17 0.03740468841515632 18-19 0.03928123814751341 20-21 0.021544234427253565 22-23 0.02379970285556738 24-25 0.0214359719426945 26-27 0.020335303349677362 28-29 0.02026312835997132 30-31 0.024864283953731504 32-33 0.024395146520642227 34-35 0.0286354271658722 36-37 0.03110742056330414 38-39 0.03128785803756925 40-41 0.034553776321767656 42-43 0.030818720604479974 44-45 0.02899630211440241 46-47 0.03814448205964325 48-49 0.03200960793462967 50-51 0.022915559231668364 52-53 0.02968196451660981 54-55 0.03182917046036456 56-57 0.024918415196011037 58-59 0.02823846472248897 60-61 0.04099539415303191 62-63 0.04913312424238815 64-65 0.042547156431711815 66-67 0.038613619492732516 68-69 0.029104564598961474 70-71 0.035474007440519685 72-73 0.03872188197729158 74-75 0.02381774660299389 76-77 0.020100734633132722 78-79 0.03025936443425815 80-81 0.023998184077258997 82-83 0.03659271978096334 84-85 0.02103900949931127 86-87 0.03278548907396962 88-89 0.03173895172323201 90-91 0.03320049526477936 92-93 0.025946908799322134 94-95 0.021526190679827053 96-97 0.01688894759121385 98-99 0.024286884036083166 100-101 0.02311404045335998 102-103 0.026434089979837917 104-105 0.0238357903504204 106-107 0.013965860508119144 108-109 0.017303953782023592 110-111 0.020876615772472677 112-113 0.012612579451130857 114-115 0.01452521667834097 116-117 0.013208023116205702 118-119 0.007794898888252546 120-121 0.005701824186777326 122-123 0.003464399505890021 124-125 0.06299072226594823 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 2771043.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.146817210815904 #Duplication Level Percentage of deduplicated Percentage of total 1 68.89131174774015 28.34658211897598 2 12.651256168265917 10.411178500856897 3 6.036165653917017 7.451070144477856 4 3.385547748343296 5.572180574382839 5 2.109217125364125 4.3393785757640115 6 1.426087297898291 3.5207372023972408 7 1.0204547193878082 2.9391924667395206 8 0.7517802775967064 2.4746692531974497 9 0.5609654681544123 2.0773749221756432 >10 2.9264365224067594 21.287047936976794 >50 0.16433440743152994 4.626744442710169 >100 0.0716547474205559 5.01283752495799 >500 0.003724090279320371 1.0473940321630648 >1k 0.0010640257940866093 0.8936123042245319 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4149 0.14972701614518433 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3275 0.11818654564364392 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 3148 0.11360343379731026 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 3.608749485302105E-5 0.0 10-11 0.0 0.0 0.0 3.608749485302105E-5 3.608749485302105E-5 12-13 0.0 0.0 0.0 3.608749485302105E-5 1.6239372683859472E-4 14-15 0.0 0.0 0.0 3.608749485302105E-5 1.9848122169161575E-4 16-17 0.0 0.0 0.0 3.608749485302105E-5 2.1652496911812627E-4 18-19 0.0 0.0 0.0 7.21749897060421E-5 2.1652496911812627E-4 20-21 0.0 0.0 0.0 2.8869995882416835E-4 2.706562113976579E-4 22-23 0.0 0.0 0.0 6.856624022073998E-4 3.247874536771894E-4 24-25 0.0 0.0 0.0 0.0019487247220631365 3.247874536771894E-4 26-27 0.0 0.0 0.0 0.0028148245985356417 4.5109368566276307E-4 28-29 0.0 0.0 0.0 0.006585967810676341 4.691374330892736E-4 30-31 0.0 0.0 0.0 0.019126372272101157 4.691374330892736E-4 32-33 0.0 0.0 0.0 0.04395456873097964 5.052249279422947E-4 34-35 0.0 0.0 0.0 0.07897748248583655 5.052249279422947E-4 36-37 0.0 0.0 0.0 0.13624833681758097 5.052249279422947E-4 38-39 0.0 0.0 0.0 0.22843384241962322 5.413124227953157E-4 40-41 0.0 0.0 0.0 0.33191473391066106 5.413124227953157E-4 42-43 0.0 0.0 0.0 0.4231800083939513 5.593561702218262E-4 44-45 0.0 0.0 0.0 0.5279600496996979 5.954436650748473E-4 46-47 0.0 0.0 0.0 0.6615739993930083 6.315311599278683E-4 48-49 0.0 0.0 0.0 0.7993380109944161 6.856624022073998E-4 50-51 0.0 0.0 0.0 0.944734527757238 7.217498970604209E-4 52-53 0.0 0.0 0.0 1.0886875447259388 7.93924886766463E-4 54-55 0.0 0.0 0.0 1.2453253161354767 7.93924886766463E-4 56-57 0.0 0.0 0.0 1.4279460838391898 8.119686341929735E-4 58-59 0.0 0.0 0.0 1.6265175242679382 8.30012381619484E-4 60-61 0.0 0.0 0.0 1.8359152131525929 8.660998764725051E-4 62-63 0.0 0.0 0.0 2.0464496581251175 9.743623610315682E-4 64-65 0.0 0.0 0.0 2.266980339171929 9.924061084580788E-4 66-67 0.0 0.0 1.8043747426510525E-5 2.52184827157139 0.0010104498558845894 68-69 0.0 0.0 3.608749485302105E-5 2.8101873554470282 0.0010104498558845894 70-71 3.608749485302105E-5 0.0 3.608749485302105E-5 3.1269633852668473 0.0010284936033111 72-73 3.608749485302105E-5 0.0 3.608749485302105E-5 3.4386330345649636 0.0010826248455906313 74-75 3.608749485302105E-5 0.0 3.608749485302105E-5 3.7506455150641838 0.001136756087870163 76-77 3.608749485302105E-5 0.0 3.608749485302105E-5 4.094667603498033 0.0011908873301496945 78-79 3.608749485302105E-5 0.0 3.608749485302105E-5 4.489933934623172 0.0011908873301496945 80-81 3.608749485302105E-5 0.0 3.608749485302105E-5 4.910263030923735 0.001208931077576205 82-83 3.608749485302105E-5 0.0 3.608749485302105E-5 5.351414611754491 0.0012630623198557366 84-85 3.608749485302105E-5 0.0 3.608749485302105E-5 5.790328767904359 0.0012630623198557366 86-87 3.608749485302105E-5 0.0 3.608749485302105E-5 6.248694083780006 0.0013171935621352682 88-89 3.608749485302105E-5 0.0 3.608749485302105E-5 6.751447018324869 0.0013893685518413103 90-91 3.608749485302105E-5 0.0 3.608749485302105E-5 7.3019437085602785 0.0014074122992678208 92-93 3.608749485302105E-5 0.0 3.608749485302105E-5 7.877827951424789 0.0014434997941208418 94-95 3.608749485302105E-5 0.0 3.608749485302105E-5 8.45717659379519 0.0014434997941208418 96-97 3.608749485302105E-5 0.0 3.608749485302105E-5 9.046214728533624 0.0014795872889738627 98-99 3.608749485302105E-5 0.0 3.608749485302105E-5 9.676013688708547 0.0015156747838268839 100-101 3.608749485302105E-5 0.0 3.608749485302105E-5 10.373476701732887 0.0015156747838268839 102-103 3.608749485302105E-5 0.0 3.608749485302105E-5 11.100802116748099 0.0015698060261064156 104-105 3.608749485302105E-5 0.0 3.608749485302105E-5 11.821379170225796 0.0016239372683859471 106-107 3.608749485302105E-5 0.0 3.608749485302105E-5 12.537409199352012 0.0016239372683859471 108-109 3.608749485302105E-5 0.0 3.608749485302105E-5 13.278177206199976 0.0016239372683859471 110-111 3.608749485302105E-5 0.0 3.608749485302105E-5 14.06548003766091 0.0017321997529450102 112-113 3.608749485302105E-5 0.0 3.608749485302105E-5 14.897693756466428 0.0017682872477980313 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 10605 0.0 36.348938 1 GGTATCA 7400 0.0 33.412926 1 CATGGGG 8485 0.0 29.407906 4 TCAACGC 13600 0.0 28.112408 4 CAACGCA 13750 0.0 27.475744 5 ATCAACG 14010 0.0 27.37472 3 TATCAAC 14305 0.0 26.850368 2 AACGCAG 14255 0.0 26.74942 6 GTACATG 15315 0.0 26.68734 1 TACATGG 15220 0.0 26.4882 2 ACATGGG 15555 0.0 25.19172 3 ACGCAGA 15695 0.0 23.880852 7 CGCAGAG 16195 0.0 23.143978 8 ATGGGGA 4080 0.0 21.289778 5 AGTACTT 8620 0.0 21.088093 12-13 GCAGAGT 17270 0.0 20.945448 9 GAGTACT 7990 0.0 20.03267 12-13 ATGGGGC 3660 0.0 19.994127 5 AGAGTAC 16175 0.0 19.899904 10-11 ACCGTCG 270 1.1074608E-6 19.831573 8 >>END_MODULE