##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920958_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3405370 Sequences flagged as poor quality 0 Sequence length 125 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.042811207005407 31.0 27.0 31.0 10.0 34.0 2 27.15980025665346 31.0 27.0 33.0 10.0 34.0 3 27.235977588338418 31.0 27.0 34.0 10.0 34.0 4 30.550171053365712 35.0 30.0 37.0 10.0 37.0 5 30.584949653047982 35.0 30.0 37.0 10.0 37.0 6 30.52209422177326 35.0 30.0 37.0 10.0 37.0 7 30.355912573376756 35.0 30.0 37.0 8.0 37.0 8 30.325306501202512 35.0 30.0 37.0 8.0 37.0 9 31.368772262632255 37.0 30.0 39.0 8.0 39.0 10-11 31.273528867641403 37.0 30.0 39.0 7.0 39.0 12-13 31.18792275141908 37.0 30.0 39.0 2.0 39.0 14-15 31.937952997765294 38.0 30.0 40.0 2.0 41.0 16-17 31.781722397272542 38.0 30.0 40.0 2.0 41.0 18-19 31.867065399648205 38.0 30.0 40.0 2.0 41.0 20-21 31.864906750220975 38.0 30.0 40.0 2.0 41.0 22-23 31.798690744324404 38.0 30.0 40.0 2.0 41.0 24-25 31.704542825008737 38.0 30.0 40.0 2.0 41.0 26-27 31.528483395343237 37.5 30.0 40.0 2.0 41.0 28-29 31.42163612177238 37.0 30.0 40.0 2.0 41.0 30-31 31.275030026105828 37.0 30.0 40.0 2.0 41.0 32-33 31.151202659329236 37.0 29.5 40.0 2.0 41.0 34-35 30.95439834731615 37.0 29.0 40.0 2.0 41.0 36-37 30.800043901250085 37.0 29.0 40.0 2.0 41.0 38-39 30.654792871259218 37.0 28.0 40.0 2.0 41.0 40-41 30.55828823299671 37.0 28.0 40.0 2.0 41.0 42-43 30.340893794213258 36.5 28.0 40.0 2.0 41.0 44-45 30.167618349841575 36.0 27.0 40.0 2.0 41.0 46-47 29.95588687866517 36.0 27.0 40.0 2.0 41.0 48-49 29.77960060140308 36.0 27.0 40.0 2.0 41.0 50-51 29.543611854218483 35.5 26.0 40.0 2.0 41.0 52-53 29.365161788586846 35.0 26.0 39.5 2.0 41.0 54-55 29.14920493221001 35.0 26.0 39.0 2.0 41.0 56-57 28.949888705192095 35.0 26.0 39.0 2.0 41.0 58-59 28.694419549123886 35.0 25.0 39.0 2.0 40.0 60-61 28.504291310489023 34.5 24.5 39.0 2.0 40.0 62-63 28.385709335549443 34.0 25.0 39.0 2.0 40.0 64-65 28.17193491456141 34.0 24.0 38.5 2.0 40.0 66-67 27.922641445716618 34.0 23.5 38.0 2.0 40.0 68-69 27.631120406886772 34.0 23.0 37.5 2.0 40.0 70-71 27.31533093320256 34.0 22.5 37.0 2.0 40.0 72-73 27.04279065123614 34.0 22.0 36.5 2.0 39.0 74-75 26.749110669325212 33.0 22.0 36.0 2.0 39.0 76-77 26.474990089182675 33.0 21.5 36.0 2.0 38.5 78-79 26.16126147819473 33.0 20.0 35.0 2.0 37.5 80-81 25.842111136234827 33.0 20.0 35.0 2.0 37.0 82-83 25.57129489600249 32.5 19.0 35.0 2.0 36.5 84-85 25.31714879734067 32.0 18.0 35.0 2.0 36.0 86-87 25.229882949576698 32.0 18.0 35.0 2.0 36.0 88-89 25.30007223884629 33.0 18.5 35.0 2.0 35.5 90-91 25.198868111247823 33.0 18.0 35.0 2.0 35.0 92-93 25.035982139973044 33.0 17.5 35.0 2.0 35.0 94-95 24.938390982477674 32.5 16.5 35.0 2.0 35.0 96-97 24.82995239871145 32.0 15.0 35.0 2.0 35.0 98-99 24.754249171162016 32.0 12.0 35.0 2.0 35.0 100-101 24.574998458317303 32.0 8.5 35.0 2.0 35.0 102-103 23.354294687508258 30.0 7.0 34.0 2.0 35.0 104-105 24.26582706137659 32.0 7.0 34.5 2.0 35.0 106-107 24.433737890449496 32.0 6.0 35.0 2.0 35.0 108-109 24.414016979065416 32.0 2.0 35.0 2.0 35.0 110-111 24.295583152491503 32.0 2.0 35.0 2.0 35.0 112-113 24.190806872674628 32.0 2.0 35.0 2.0 35.0 114-115 24.04274190469758 32.0 2.0 35.0 2.0 35.0 116-117 23.895814551722722 32.0 2.0 35.0 2.0 35.0 118-119 23.68604248583854 32.0 2.0 35.0 2.0 35.0 120-121 23.45013155692333 32.0 2.0 35.0 2.0 35.0 122-123 23.192253998831255 32.0 2.0 35.0 2.0 35.0 124-125 22.097043346244313 30.5 2.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 305440.0 3 41977.0 4 25561.0 5 22045.0 6 23956.0 7 26025.0 8 28004.0 9 29158.0 10 30116.0 11 31135.0 12 31049.0 13 30861.0 14 30518.0 15 27214.0 16 23203.0 17 20618.0 18 19442.0 19 18745.0 20 18859.0 21 20807.0 22 25141.0 23 32800.0 24 43143.0 25 53232.0 26 61698.0 27 71250.0 28 81110.0 29 93198.0 30 106456.0 31 125267.0 32 148001.0 33 179511.0 34 225506.0 35 297392.0 36 424038.0 37 493641.0 38 139158.0 39 95.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.64096551817331 18.856034459207184 12.70020836387212 24.80279165874739 2 15.481324423796112 20.04745735431858 39.385257204586196 25.085961017299113 3 18.891591475777904 24.731411458230838 29.082932081912567 27.29406498407869 4 12.71808949184682 16.164315402909516 36.77813960605917 34.33945549918449 5 13.884985160938834 37.74878005442213 34.38656158173672 13.979673202902317 6 32.94613983133971 36.173421261909766 17.230796067647365 13.649642839103157 7 28.3350243819352 32.40522908446971 21.280987670273422 17.97875886332167 8 26.033722499335564 35.82942870274247 19.92138367088626 18.215465127035706 9 26.45252705010344 16.12584079606373 19.39772498682184 38.02390716701099 10-11 24.96065929977151 26.36136002456252 27.753382815664978 20.924597860000997 12-13 25.465929987047364 23.83931037530926 27.710989858296315 22.983769779347057 14-15 22.760365749981574 25.35999274067866 24.976103265608053 26.903538243731713 16-17 23.021573754990392 28.19802689634819 25.84259219832643 22.937807150334994 18-19 23.037036960904526 27.492487230089786 27.207701604099526 22.262774204906165 20-21 23.912418482226943 26.666703864251524 26.778678383514343 22.642199270007186 22-23 23.380925832961736 26.442138486582884 26.625909033579237 23.551026646876146 24-25 23.037761353087987 26.633031911660243 26.93403267311875 23.395174062133016 26-27 23.029664547683005 26.74108437441039 26.764253952079496 23.464997125827107 28-29 23.084787542199074 26.903671583725075 26.80708650780786 23.204454366267992 30-31 23.291008878606288 26.80125115976602 26.64465796978581 23.263081991841883 32-33 23.022259405330317 26.80170242906093 26.54935095883134 23.626687206777415 34-35 23.255515159346405 26.760666165466528 26.774600899810874 23.209217775376192 36-37 23.441238172754545 26.513704605234274 26.702009580000908 23.343047642010276 38-39 23.345375738456873 26.692821762370873 26.586635206158586 23.375167293013668 40-41 23.34029496078799 26.710404911823627 26.697381226041262 23.25191890134712 42-43 23.37813954123498 26.65267277176761 26.597376526464895 23.37181116053252 44-45 23.33450844901322 26.70282264156706 26.557418594362943 23.405250315056787 46-47 23.29155645796439 26.840326846788475 26.483263134104195 23.384853561142936 48-49 23.359149155604424 26.85642808394973 26.40226519083916 23.382157569606694 50-51 23.207471505136425 27.030330155840886 26.398047484562237 23.36415085446045 52-53 23.434960770137497 26.83193091738383 26.29882295729557 23.434285355183103 54-55 23.25373925004155 26.917108959341178 26.309067875896897 23.520083914720374 56-57 23.308961978807552 26.87013781786617 26.235565419731927 23.58533478359435 58-59 23.343200740055504 26.66541855718544 26.4155470390438 23.575833663715255 60-61 23.33017456988889 26.70344908189811 26.547194539401488 23.419181808811512 62-63 23.14994368650047 26.840452916187594 26.62439116076293 23.385212236549002 64-65 23.162227307802155 26.772524065341134 26.469298197311204 23.595950429545507 66-67 23.182971708197176 26.902070495758462 26.382258833700206 23.53269896234416 68-69 23.511930064284723 26.661545150321935 26.35100917218353 23.47551561320981 70-71 23.202653582784603 26.65671622067084 26.47922336597696 23.661406830567593 72-73 23.387240893563586 26.677553612038547 26.408786737016243 23.526418757381617 74-75 23.34392607098216 26.802557938379074 26.34976649040817 23.503749500230594 76-77 23.308520836609436 26.5839201689229 26.480934872738864 23.626624121728796 78-79 23.46986464428656 26.630646006494764 26.392580168825003 23.506909180393677 80-81 23.389802286715096 26.701160625084796 26.346676909721918 23.56236017847819 82-83 23.358783131686298 26.753533393151297 26.38226263727922 23.505420837883186 84-85 23.439050185466144 26.846714357471363 26.21094789842478 23.50328755863771 86-87 23.297622937278582 26.6418252904789 26.360072688558894 23.70047908368362 88-89 23.288893717863257 26.568610753016557 26.396309358454438 23.74618617066574 90-91 23.275015912426227 26.638921170537895 26.400458688992273 23.685604228043605 92-93 23.292202135074966 26.670713561900683 26.425256737764858 23.61182756525949 94-95 23.125489791270546 26.591872104293806 26.588906008385244 23.693732096050407 96-97 23.331376531950827 26.400711026639417 26.56990729225186 23.698005149157893 98-99 23.307871370297423 26.51816660945262 26.350430103769344 23.82353191648061 100-101 23.08862243599543 26.6387594535978 26.492233368562445 23.78038474184433 102-103 23.000797770530184 26.507111581710397 26.635066162973374 23.857024484786045 104-105 22.937388155901807 26.719372429338613 26.39102965363589 23.952209761123694 106-107 22.935190391597303 26.786255274337506 26.382899611329435 23.895654722735753 108-109 22.999913657097682 26.715492501089567 26.400649275130778 23.88394456668198 110-111 22.91149220991701 26.91054294660203 26.388521550289145 23.789443293191813 112-113 22.92462029259506 26.974646626649474 26.302838248705356 23.79789483205011 114-115 22.820636397491157 27.091945880603223 26.325568677758866 23.761849044146757 116-117 23.010254365109198 26.968469251588168 26.25981444761869 23.761461935683943 118-119 22.932866990140866 26.911423425963243 26.153968138599076 24.001741445296812 120-121 22.923936644388014 27.025646756062216 26.26149057223538 23.78892602731439 122-123 22.917516493617672 27.051926445733688 26.21850133843156 23.81205572221708 124-125 22.90669819556043 27.12731152225734 26.052927641717687 23.913062640464542 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 776.0 1 585.5 2 344.0 3 266.5 4 225.5 5 229.0 6 243.5 7 260.5 8 320.5 9 374.5 10 389.0 11 440.5 12 534.5 13 612.5 14 704.0 15 827.0 16 969.0 17 1120.0 18 1285.0 19 1559.5 20 1950.0 21 2458.0 22 3108.5 23 3951.0 24 5231.5 25 7083.5 26 9848.0 27 13543.5 28 17817.0 29 22953.5 30 28923.0 31 36716.5 32 44971.5 33 51346.5 34 56726.5 35 63039.5 36 70876.0 37 77922.0 38 84558.0 39 90999.0 40 98581.0 41 106711.5 42 112778.0 43 119081.0 44 124058.5 45 128490.5 46 133176.0 47 135917.5 48 138402.5 49 140675.0 50 141770.5 51 138729.0 52 131137.5 53 125103.5 54 120145.0 55 112879.0 56 104125.0 57 95374.5 58 87800.5 59 78729.5 60 66549.5 61 54955.0 62 45617.5 63 35913.5 64 27405.0 65 21502.0 66 16430.5 67 12405.5 68 9491.5 69 7389.0 70 6013.0 71 4864.5 72 3939.0 73 3397.5 74 2760.0 75 2133.5 76 1633.0 77 1136.0 78 739.5 79 495.0 80 340.5 81 239.0 82 165.5 83 103.0 84 73.5 85 60.5 86 51.0 87 35.0 88 22.0 89 19.5 90 21.0 91 18.0 92 9.0 93 6.5 94 6.5 95 5.5 96 6.0 97 7.5 98 8.5 99 8.5 100 15.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.036090057761711654 2 0.018470826958597742 3 0.02387405773821934 4 0.02193594234987681 5 0.014829519259287539 6 0.005344500010277885 7 0.005432596164293454 8 0.006607211551167714 9 0.003377019237263498 10-11 0.005329817317941956 12-13 0.007972701938409042 14-15 0.002730980774482655 16-17 0.002202403850389238 18-19 4.404807700778477E-5 20-21 0.0038468653920132024 22-23 0.0010718365405227627 24-25 0.00185001923432696 26-27 0.0012480288485539016 28-29 0.0024079615430922336 30-31 0.0014535865412568974 32-33 1.4682692335928257E-5 34-35 0.006166730781089867 36-37 0.007502855783659338 38-39 0.0012480288485539016 40-41 0.0010571538481868345 42-43 0.0022170865427251665 44-45 9.2500961716348E-4 46-47 0.01924900965240194 48-49 0.002760346159154512 50-51 0.009587798095361151 52-53 0.0016444615416239643 54-55 2.349230773748521E-4 56-57 1.7619230803113907E-4 58-59 0.0064603846278084315 60-61 8.515961554838387E-4 62-63 0.009543750018353366 64-65 0.009323509633314441 66-67 5.8730769343713026E-5 68-69 0.003773451930333561 70-71 0.004771875009176683 72-73 0.010997336559610263 74-75 0.0014535865412568974 76-77 8.662788478197669E-4 78-79 2.7897115438263687E-4 80-81 0.003993692315372485 82-83 0.0011305673098664757 84-85 9.2500961716348E-4 86-87 0.01270052887057794 88-89 0.0 90-91 3.670673083982064E-4 92-93 0.008530644247174316 94-95 0.006475067320144361 96-97 0.004492903854794046 98-99 8.515961554838387E-4 100-101 0.01513785579834203 102-103 0.007502855783659338 104-105 0.007033009628909634 106-107 0.01640056733923186 108-109 0.010042961557774926 110-111 0.01833868272757439 112-113 0.0024520096201000184 114-115 0.013331884641022855 116-117 0.00546196154896531 118-119 0.004478221162458117 120-121 0.007091740398253347 122-123 0.007781826938041975 124-125 0.05670455780135492 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 3405370.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.36028271303489 #Duplication Level Percentage of deduplicated Percentage of total 1 74.67323549941102 41.33931428344428 2 12.414447230494515 13.745346168124586 3 5.124621696456523 8.511015177395567 4 2.594973569478266 5.746338817566802 5 1.4612167385963457 4.044668587685625 6 0.9461417480480534 3.142720479512715 7 0.6252508596938299 2.422984505145297 8 0.4396506110140471 1.947134569655694 9 0.3130760836910471 1.5598782453443527 >10 1.3244320657148105 12.253083239790495 >50 0.05859107589023558 2.2015627773833115 >100 0.02259866865816239 2.208397712313787 >500 0.0013899386140640757 0.5365305055216527 >1k 3.742142391243999E-4 0.3410249311159116 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 1.4682692335928255E-5 2.936538467185651E-5 12-13 0.0 0.0 0.0 2.936538467185651E-5 2.0555769270299556E-4 14-15 0.0 0.0 0.0 2.936538467185651E-5 2.642884620467086E-4 16-17 0.0 0.0 0.0 4.404807700778476E-5 3.3770192372634984E-4 18-19 0.0 0.0 0.0 5.873076934371302E-5 3.964326930700629E-4 20-21 0.0 0.0 0.0 1.027788463514978E-4 5.285769240934171E-4 22-23 1.4682692335928255E-5 0.0 0.0 2.6428846204670857E-4 5.579423087652736E-4 24-25 2.936538467185651E-5 0.0 0.0 7.781826938041975E-4 5.579423087652736E-4 26-27 2.936538467185651E-5 0.0 0.0 0.0014095384642491124 6.166730781089867E-4 28-29 2.936538467185651E-5 0.0 0.0 0.003846865392013203 6.460384627808432E-4 30-31 2.936538467185651E-5 0.0 0.0 0.011731471176406674 6.460384627808432E-4 32-33 2.936538467185651E-5 0.0 0.0 0.029336019287184656 6.460384627808432E-4 34-35 2.936538467185651E-5 0.0 0.0 0.052945788563357285 7.341346167964128E-4 36-37 2.936538467185651E-5 0.0 0.0 0.09279461556306656 7.341346167964128E-4 38-39 2.936538467185651E-5 0.0 0.0 0.1584996637663455 7.635000014682693E-4 40-41 2.936538467185651E-5 0.0 0.0 0.2315754235222604 7.635000014682693E-4 42-43 2.936538467185651E-5 0.0 0.0 0.2985431832664292 7.928653861401258E-4 44-45 2.936538467185651E-5 0.0 0.0 0.3750693757212873 8.956442324916235E-4 46-47 5.873076934371302E-5 0.0 0.0 0.4676584335916508 9.690576941712648E-4 48-49 5.873076934371302E-5 0.0 0.0 0.5631693472368642 9.690576941712648E-4 50-51 5.873076934371302E-5 0.0 0.0 0.660207260885014 0.0010277884635149779 52-53 5.873076934371302E-5 0.0 0.0 0.7587574918437644 0.0011158846175305472 54-55 5.873076934371302E-5 0.0 0.0 0.8692300689792887 0.0011452500022024038 56-57 5.873076934371302E-5 0.0 0.0 0.9921829346003519 0.0011746153868742604 58-59 5.873076934371302E-5 0.0 0.0 1.1325054252548181 0.0012186634638820452 60-61 5.873076934371302E-5 0.0 0.0 1.2804335505392952 0.0012333461562179734 62-63 5.873076934371302E-5 0.0 0.0 1.4289783489018815 0.001321442310233543 64-65 5.873076934371302E-5 0.0 0.0 1.5867145126667586 0.001321442310233543 66-67 5.873076934371302E-5 0.0 0.0 1.7704537245585648 0.0013361250025694712 68-69 5.873076934371302E-5 0.0 0.0 1.9811650422714713 0.001380173079577256 70-71 5.873076934371302E-5 0.0 0.0 2.2038721196228312 0.001438903848920969 72-73 5.873076934371302E-5 0.0 0.0 2.429559783518384 0.0016444615416239645 74-75 5.873076934371302E-5 1.4682692335928255E-5 0.0 2.662838399351612 0.0017619230803113904 76-77 5.873076934371302E-5 2.936538467185651E-5 0.0 2.920695842155184 0.0017619230803113904 78-79 7.341346167964128E-5 2.936538467185651E-5 0.0 3.20890241001712 0.0018500192343269602 80-81 8.809615401556952E-5 2.936538467185651E-5 0.0 3.513054381755874 0.0018793846189988166 82-83 8.809615401556952E-5 2.936538467185651E-5 0.0 3.8350164592981084 0.0019968461576862426 84-85 8.809615401556952E-5 2.936538467185651E-5 0.0 4.1623524022352925 0.0020408942346940274 86-87 8.809615401556952E-5 2.936538467185651E-5 0.0 4.518437056766225 0.002143673081045525 88-89 8.809615401556952E-5 2.936538467185651E-5 0.0 4.910097874827111 0.00218772115805331 90-91 8.809615401556952E-5 2.936538467185651E-5 0.0 5.324414087162335 0.002202403850389238 92-93 8.809615401556952E-5 2.936538467185651E-5 0.0 5.757553511072218 0.0022611346197329513 94-95 8.809615401556952E-5 2.936538467185651E-5 0.0 6.195406079221935 0.002319865389076664 96-97 8.809615401556952E-5 2.936538467185651E-5 0.0 6.655825945491973 0.002584153851123373 98-99 8.809615401556952E-5 2.936538467185651E-5 0.0 7.15584503299201 0.002760346159154512 100-101 8.809615401556952E-5 5.873076934371302E-5 0.0 7.69490539941328 0.002760346159154512 102-103 8.809615401556952E-5 5.873076934371302E-5 0.0 8.250057996634727 0.0028190769284982247 104-105 1.1746153868742604E-4 5.873076934371302E-5 0.0 8.798104170765585 0.002877807697841938 106-107 1.1746153868742604E-4 5.873076934371302E-5 0.0 9.361170739156098 0.002877807697841938 108-109 1.1746153868742604E-4 5.873076934371302E-5 0.0 9.948860182593961 0.002877807697841938 110-111 1.1746153868742604E-4 5.873076934371302E-5 0.0 10.57915879919069 0.0029071730825137943 112-113 1.1746153868742604E-4 5.873076934371302E-5 0.0 11.232362415831467 0.0029071730825137943 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACATG 14680 0.0 30.001505 1 TACATGG 14820 0.0 28.908527 2 GTATCAA 8905 0.0 28.1375 1 CATGGGG 8705 0.0 27.476454 4 ACATGGG 15640 0.0 27.050055 3 TCAACGC 9905 0.0 24.50807 4 AACGCAG 10235 0.0 24.182573 6 CAACGCA 10105 0.0 24.140404 5 ATCAACG 10145 0.0 23.754084 3 TATCAAC 10805 0.0 22.909216 2 ACGCAGA 11580 0.0 20.911388 7 ATGGGGA 4675 0.0 20.362701 5 CGCAGAG 11825 0.0 20.17624 8 GGTATCA 6765 0.0 18.915073 1 GTATAGC 1540 0.0 17.391186 1 GTATATA 1850 0.0 16.728962 1 GCAGAGT 13355 0.0 16.617357 9 ATGGGGG 4625 0.0 16.46627 5 ACGGCGT 330 7.517254E-6 16.226528 8 TACGGCG 295 5.2363E-5 16.134851 7 >>END_MODULE