##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920958_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3405370 Sequences flagged as poor quality 0 Sequence length 125 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.007556007129914 31.0 30.0 34.0 26.0 34.0 2 30.11604700810778 31.0 30.0 34.0 26.0 34.0 3 30.224504532547122 31.0 30.0 34.0 26.0 34.0 4 33.78503510631737 35.0 35.0 37.0 30.0 37.0 5 33.29260462152424 35.0 33.0 37.0 27.0 37.0 6 33.05611078972329 35.0 33.0 37.0 26.0 37.0 7 32.909045419440474 35.0 33.0 37.0 26.0 37.0 8 32.8444674147009 35.0 33.0 37.0 26.0 37.0 9 34.18050432111635 38.0 34.0 39.0 25.0 39.0 10-11 34.07025521455819 37.5 33.5 39.0 25.0 39.0 12-13 33.96591530435753 37.5 33.0 39.0 25.0 39.0 14-15 34.865715913395604 38.5 33.5 41.0 25.0 41.0 16-17 34.86259775002423 38.5 33.5 41.0 25.0 41.0 18-19 34.90491473760561 38.5 33.5 41.0 25.0 41.0 20-21 34.87543497476045 39.0 34.0 41.0 24.5 41.0 22-23 34.84055036603952 39.0 34.0 41.0 24.0 41.0 24-25 34.80961452059542 39.0 34.0 41.0 24.0 41.0 26-27 34.65630254568519 39.0 34.0 41.0 23.5 41.0 28-29 34.54144380786816 39.0 33.5 41.0 23.0 41.0 30-31 34.376656574762805 38.0 33.0 41.0 22.5 41.0 32-33 34.23496697862494 38.0 33.0 40.0 22.0 41.0 34-35 34.108804182805386 38.0 33.0 40.0 20.5 41.0 36-37 33.96166202204166 38.0 33.0 40.0 19.0 41.0 38-39 33.81906209897897 38.0 33.0 40.0 18.0 41.0 40-41 33.63332765602563 38.0 33.0 40.0 17.0 41.0 42-43 33.482985696121126 38.0 32.5 40.0 15.5 41.0 44-45 33.26221614685041 38.0 32.0 40.0 14.5 41.0 46-47 33.11034806790451 38.0 32.0 40.0 11.0 41.0 48-49 32.89896883451725 38.0 32.0 40.0 9.0 41.0 50-51 32.70313592942911 38.0 31.5 40.0 8.0 41.0 52-53 32.467444947245085 37.0 31.0 40.0 7.0 41.0 54-55 32.282533028716415 37.0 31.0 40.0 6.0 41.0 56-57 32.1541390509695 37.0 31.0 40.0 2.0 41.0 58-59 32.093785403641895 37.0 31.0 40.0 2.0 41.0 60-61 31.83572372458793 36.0 31.0 40.0 2.0 41.0 62-63 31.5876638955532 36.0 30.5 39.5 2.0 41.0 64-65 31.328737699574496 35.5 30.0 39.0 2.0 41.0 66-67 31.028972475824947 35.0 30.0 39.0 2.0 41.0 68-69 30.718732913016794 35.0 29.5 38.5 2.0 40.5 70-71 30.366845746570856 35.0 29.0 38.0 2.0 40.0 72-73 30.091559360656845 35.0 29.0 37.0 2.0 39.5 74-75 29.827918552169074 35.0 29.0 37.0 2.0 39.0 76-77 29.495100532394424 34.0 29.0 36.0 2.0 39.0 78-79 29.166261815896657 34.0 29.0 36.0 2.0 38.5 80-81 28.89547229816437 34.0 29.0 35.0 2.0 37.0 82-83 28.630594766501144 34.0 29.0 35.0 2.0 37.0 84-85 28.420284139462083 34.0 28.0 35.0 2.0 36.0 86-87 28.180881959963237 34.0 28.0 35.0 2.0 36.0 88-89 28.03991974440369 34.0 27.0 35.0 2.0 36.0 90-91 27.84459368585499 34.0 27.0 35.0 2.0 35.0 92-93 27.974925485336396 34.0 28.0 35.0 2.0 35.0 94-95 27.916889794647865 34.0 27.5 35.0 2.0 35.0 96-97 27.849903681538276 34.0 27.0 35.0 2.0 35.0 98-99 27.794798509413077 34.0 27.0 35.0 2.0 35.0 100-101 27.658262244631274 34.0 27.0 35.0 2.0 35.0 102-103 26.36122374367543 31.5 24.5 34.0 2.0 35.0 104-105 27.41585422435741 33.5 27.0 35.0 2.0 35.0 106-107 27.608895655978646 34.0 27.0 35.0 2.0 35.0 108-109 27.588549408727978 34.0 27.0 35.0 2.0 35.0 110-111 27.52584755841509 34.0 27.0 35.0 2.0 35.0 112-113 27.423663214276274 34.0 27.0 35.0 2.0 35.0 114-115 27.32959311322999 34.0 27.0 35.0 2.0 35.0 116-117 27.20167103721475 34.0 27.0 35.0 2.0 35.0 118-119 27.072394923312295 34.0 27.0 35.0 2.0 35.0 120-121 26.93485215997087 34.0 26.5 35.0 2.0 35.0 122-123 26.701248175675477 34.0 25.0 35.0 2.0 35.0 124-125 25.59696582162878 32.5 22.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 108551.0 3 36395.0 4 17980.0 5 14018.0 6 15394.0 7 18252.0 8 20693.0 9 22733.0 10 23794.0 11 25126.0 12 25920.0 13 27763.0 14 29770.0 15 25050.0 16 19659.0 17 17665.0 18 16413.0 19 15763.0 20 15421.0 21 16378.0 22 18740.0 23 23949.0 24 32374.0 25 42438.0 26 52155.0 27 60665.0 28 71718.0 29 84409.0 30 99607.0 31 118742.0 32 143552.0 33 177399.0 34 228740.0 35 311050.0 36 492088.0 37 690422.0 38 244119.0 39 465.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.23440228645029 19.786091857576334 13.61763537604915 25.361870479924224 2 15.71959330092959 20.892279483450835 38.51204921171515 24.87607800390442 3 18.562700516111033 24.699620441814538 29.82173245919933 26.9159465828751 4 13.025160544638922 16.65206835830629 36.30474328882099 34.018027808233796 5 13.594655335266282 37.74885338884686 34.51337752172217 14.143113754164688 6 32.717098219188784 36.6144618010385 16.944576428169956 13.723863551602767 7 28.041030942064204 32.28981259736846 21.44342460946161 18.225731851105724 8 26.105556777597034 35.93249318879111 19.75369517443068 18.208254859181174 9 26.348677089694256 15.472259843146446 19.536964503960405 38.64209856319889 10-11 25.132542887915022 26.08082186429711 27.868972349487347 20.91766289830052 12-13 25.703006106022062 23.356536677324804 28.086130170656993 22.854327045996133 14-15 22.8548605595477 24.864618923859968 25.483101010908033 26.7974195056843 16-17 22.91440993991348 27.83339984480819 26.28933975035651 22.962850464921818 18-19 22.95622227878809 26.854542375365902 28.043140400479484 22.146094945366528 20-21 23.755886029549984 26.041098819504494 27.681021842926423 22.5219933080191 22-23 23.228314714262403 25.873956215652356 27.533921935746985 23.363807134338252 24-25 22.934951351229103 26.176876131078604 27.758913923697804 23.129258593994496 26-27 22.916900105985736 26.34615613371326 27.630350190552573 23.106593569748437 28-29 22.901340466982642 26.43143657798655 27.75093260540034 22.916290349630465 30-31 23.13335972925771 26.28782934447445 27.559592030232338 23.0192188960355 32-33 22.840640268062906 26.35188719645982 27.460880568317798 23.346591967159476 34-35 23.058152329400624 26.364278039429713 27.624016063737976 22.953553567431687 36-37 23.280295914867928 26.136414874172292 27.51705718333048 23.066232027629297 38-39 23.18572828039379 26.27844334683075 27.408833685088656 23.1269946876868 40-41 23.133474077770945 26.320654094449957 27.500757135358178 23.04511469242092 42-43 23.306843271647214 26.145116620355935 27.341039435182868 23.207000672813983 44-45 23.17565283187793 26.301103530480958 27.23666203839284 23.286581599248272 46-47 23.227203619848357 26.350124797286114 27.086085818642434 23.336585764223095 48-49 23.320901687679246 26.528283890945982 26.87509023383175 23.275724187543023 50-51 23.153631965881754 26.679374851305425 26.87261170817387 23.294381474638946 52-53 23.423977553813305 26.494158016854026 26.779464512048932 23.302399917283733 54-55 23.202867275701813 26.6291489423888 26.695358419009345 23.472625362900047 56-57 23.183563172812853 26.57562673481077 26.66049845060287 23.58031164177351 58-59 23.109332002526692 26.43976570087722 26.910561069822847 23.54034122677324 60-61 23.209532435126366 26.50474832706187 26.946252997540277 23.339466240271488 62-63 23.027448908887475 26.63210036205161 26.959910793726944 23.38053993533397 64-65 22.982676932188333 26.50072737613454 26.877179778238407 23.639415913438715 66-67 23.006101087878992 26.67873919663281 26.77122932705315 23.543930388435047 68-69 23.268938785329347 26.414488303324873 26.730738106155243 23.585834805190533 70-71 22.99425183360868 26.35034028393028 26.87662886256336 23.77877901989768 72-73 23.183765422868838 26.443538809036234 26.69555717385742 23.67713859423751 74-75 23.161379035665462 26.490055429476005 26.645257374846036 23.7033081600125 76-77 23.04033783946516 26.348990540706446 26.785637710760497 23.82503390906789 78-79 23.150804036558732 26.458626154209934 26.663097740120463 23.727472069110867 80-81 23.0820553007682 26.491504683981766 26.60427917435973 23.822160840890305 82-83 22.97303390755343 26.552322033263493 26.640492981795187 23.834151077387887 84-85 23.0774935570483 26.608652565821345 26.439532885451083 23.87432099167927 86-87 23.0276846974467 26.381734371133124 26.5012443757082 24.089336555711974 88-89 22.92228512579131 26.399578301627137 26.544599537823753 24.133537034757804 90-91 22.888853704504434 26.47375897691382 26.55208666246804 24.085300656113702 92-93 22.85416910519292 26.471975220216358 26.61271337074112 24.061142303849596 94-95 22.664924549967463 26.38518176722241 26.75815471717454 24.191738965635587 96-97 22.894256831125105 26.200235167894515 26.665768914869194 24.239739086111186 98-99 22.832789090569975 26.297653673620296 26.497135107072754 24.37242212873697 100-101 22.64808045110706 26.399003466484483 26.619983774902323 24.332932307506134 102-103 22.642018747797955 26.175306171393707 26.68753900161448 24.49513607919386 104-105 22.544754903587766 26.392109614083775 26.42945615621693 24.633679326111533 106-107 22.520877179276773 26.40936011893399 26.433428274546728 24.63633442724251 108-109 22.529803425154412 26.407919972039558 26.45450113222177 24.60777547058426 110-111 22.401869077901303 26.55649653336803 26.38858028530489 24.653054103425774 112-113 22.369428869145167 26.63821115289325 26.302510099959942 24.689849878001645 114-115 22.26185630230333 26.73121191882987 26.272299493259414 24.73463228560738 116-117 22.3153940112325 26.599388946827567 26.27807647768346 24.80714056425647 118-119 22.25164209278654 26.60083122228794 26.19684967222753 24.950677012697987 120-121 22.141445543138452 26.724973492781416 26.257982450099547 24.875598513980584 122-123 22.054924698494442 26.729479590889817 26.18185363515801 25.033742075457738 124-125 21.958710390952852 26.77015072902214 26.125164030715837 25.145974849309177 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 41.0 1 52.0 2 136.5 3 223.5 4 203.5 5 183.5 6 225.5 7 425.5 8 676.5 9 723.5 10 615.5 11 542.0 12 597.0 13 671.0 14 761.0 15 896.5 16 1030.0 17 1203.5 18 1449.5 19 1767.0 20 2088.0 21 2586.5 22 3286.5 23 4140.5 24 5365.5 25 7117.0 26 9847.5 27 13656.5 28 18009.5 29 23319.0 30 29714.5 31 37683.5 32 46295.0 33 52566.5 34 57486.0 35 63795.5 36 71337.0 37 78143.5 38 85131.0 39 91789.5 40 99068.5 41 106826.5 42 112794.5 43 119758.5 44 125547.5 45 129355.0 46 133173.0 47 136304.5 48 139309.5 49 141452.0 50 144155.5 51 141240.0 52 132064.0 53 125956.0 54 121085.5 55 113705.0 56 104184.0 57 94844.0 58 87346.5 59 78219.0 60 65302.5 61 53316.0 62 43893.5 63 33678.5 64 24718.0 65 19126.0 66 14491.5 67 10683.5 68 8112.5 69 6302.5 70 5116.0 71 4114.0 72 3324.5 73 3046.5 74 2432.5 75 1782.0 76 1319.5 77 878.0 78 561.0 79 348.5 80 228.0 81 144.0 82 98.0 83 50.5 84 30.5 85 27.0 86 20.5 87 15.0 88 8.5 89 5.5 90 5.5 91 5.5 92 3.5 93 4.5 94 4.0 95 4.5 96 8.5 97 6.0 98 2.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.04892273086331294 2 5.8730769343713026E-5 3 0.0027897115438263683 4 0.12600686562693628 5 0.01626842310820851 6 0.0019968461576862426 7 0.003964326930700628 8 0.009426288479665939 9 0.02328675004478221 10-11 0.018294634650566605 12-13 0.01810375965019954 14-15 0.026605038512701993 16-17 0.035106317375204456 18-19 0.03745554814895298 20-21 0.02049703850095584 22-23 0.02206808658090017 24-25 0.02086410580935405 26-27 0.019572028883792364 28-29 0.019410519268097153 30-31 0.023609769276172633 32-33 0.02337484619879778 34-35 0.027368538514170267 36-37 0.029732451980254714 38-39 0.029805865441934355 40-41 0.032037634676995455 42-43 0.029703086595582857 44-45 0.02739790389884212 46-47 0.03669204814748471 48-49 0.02996737505762957 50-51 0.021730384657173817 52-53 0.028220134669654104 54-55 0.03005547121164514 56-57 0.024079615430922338 58-59 0.026972105821100205 60-61 0.0390265962288973 62-63 0.04620643278116622 64-65 0.03976073084569372 66-67 0.03591386545368051 68-69 0.027632826976216975 70-71 0.03388765391132241 72-73 0.03679482699383621 74-75 0.022714125043681012 76-77 0.019851000038175 78-79 0.02892490390177866 80-81 0.02313992312142293 82-83 0.0348713942978296 84-85 0.019983144269198356 86-87 0.030907067367128976 88-89 0.030569365443402625 90-91 0.03177334621494874 92-93 0.024094298123258265 94-95 0.02054108657796363 96-97 0.016694221185950424 98-99 0.02327206735244628 100-101 0.0225526154279858 102-103 0.025357009664148094 104-105 0.022640711582001368 106-107 0.013390615410366569 108-109 0.016444615416239646 110-111 0.020452990423948058 112-113 0.011922346176773744 114-115 0.01386046156511627 116-117 0.012597750024226443 118-119 0.007752461553370118 120-121 0.0048599711631922525 122-123 0.00370003846865392 124-125 0.060022846269274704 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 3405370.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.694739976720385 #Duplication Level Percentage of deduplicated Percentage of total 1 69.5809078645643 34.57805123673661 2 14.581300661398448 14.492278897811536 3 6.203970319446393 9.249140755445382 4 3.111220324971625 6.1844514023900965 5 1.829019836293248 4.544633258842831 6 1.1511585410908212 3.4323914622893485 7 0.7824821286401211 2.721967214344104 8 0.5481465670788765 2.179200089609335 9 0.38196439422419814 1.7083459126203342 >10 1.7163095502278107 14.239931122058422 >50 0.08007967567663689 2.727156419690334 >100 0.03118135227488528 2.7827357053231006 >500 0.0017238089300268635 0.6034897759738468 >1k 5.349751824357032E-4 0.5562267468646684 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3571 0.10486378866319959 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.873076934371302E-5 2 0.0 0.0 0.0 0.0 5.873076934371302E-5 3 0.0 0.0 0.0 0.0 5.873076934371302E-5 4 0.0 0.0 0.0 2.936538467185651E-5 5.873076934371302E-5 5 0.0 0.0 0.0 2.936538467185651E-5 8.809615401556952E-5 6 0.0 0.0 0.0 2.936538467185651E-5 8.809615401556952E-5 7 0.0 0.0 0.0 2.936538467185651E-5 8.809615401556952E-5 8 0.0 0.0 0.0 2.936538467185651E-5 8.809615401556952E-5 9 0.0 0.0 0.0 2.936538467185651E-5 8.809615401556952E-5 10-11 0.0 0.0 0.0 4.404807700778476E-5 8.809615401556952E-5 12-13 0.0 0.0 0.0 5.873076934371302E-5 3.083365390544933E-4 14-15 0.0 0.0 0.0 5.873076934371302E-5 4.111153854059911E-4 16-17 0.0 0.0 0.0 7.341346167964128E-5 4.6984615474970415E-4 18-19 0.0 0.0 0.0 8.809615401556952E-5 5.579423087652736E-4 20-21 0.0 0.0 0.0 1.3214423102335428E-4 6.460384627808432E-4 22-23 0.0 0.0 0.0 2.936538467185651E-4 7.341346167964128E-4 24-25 0.0 0.0 0.0 8.369134631479105E-4 7.635000014682693E-4 26-27 0.0 0.0 0.0 0.0015123173106006103 8.369134631479105E-4 28-29 0.0 0.0 0.0 0.004096471161723983 8.809615401556952E-4 30-31 0.0 0.0 0.0 0.011878298099765958 8.809615401556952E-4 32-33 0.0 0.0 0.0 0.029380067364192436 9.250096171634801E-4 34-35 0.0 0.0 0.0 0.05251999048561537 0.0010277884635149779 36-37 0.0 0.0 0.0 0.09233945210065278 0.0010277884635149779 38-39 0.0 0.0 0.0 0.15826474068897067 0.0010277884635149779 40-41 0.0 0.0 0.0 0.2308266062131281 0.0010277884635149779 42-43 0.0 0.0 0.0 0.2979411928806561 0.001042471155850906 44-45 0.0 0.0 0.0 0.3749519141825999 0.0010865192328586909 46-47 0.0 0.0 0.0 0.46792272205369756 0.0011305673098664757 48-49 0.0 0.0 0.0 0.5641237222386994 0.0011452500022024038 50-51 0.0 0.0 0.0 0.6616902128109428 0.0011452500022024038 52-53 0.0 0.0 0.0 0.7605194149240757 0.0012920769255616864 54-55 0.0 0.0 0.0 0.8714618382143496 0.0012920769255616864 56-57 2.936538467185651E-5 0.0 0.0 0.9954571749912638 0.0013067596178976148 58-59 2.936538467185651E-5 0.0 0.0 1.137879290649768 0.001321442310233543 60-61 2.936538467185651E-5 0.0 0.0 1.288244742862009 0.0013508076949053994 62-63 2.936538467185651E-5 0.0 0.0 1.438066935457821 0.001438903848920969 64-65 2.936538467185651E-5 0.0 0.0 1.5976384357646893 0.0014535865412568971 66-67 2.936538467185651E-5 0.0 0.0 1.7842995034313454 0.0015123173106006103 68-69 2.936538467185651E-5 0.0 0.0 1.998182282688812 0.001556365387608395 70-71 5.873076934371302E-5 0.0 0.0 2.2240167735077248 0.001556365387608395 72-73 5.873076934371302E-5 0.0 0.0 2.4529786777941895 0.0016297788492880363 74-75 5.873076934371302E-5 0.0 0.0 2.6893993897873063 0.0017325576956395338 76-77 5.873076934371302E-5 0.0 0.0 2.9505310729817906 0.0017619230803113904 78-79 5.873076934371302E-5 0.0 0.0 3.2441849197003556 0.001791288464983247 80-81 5.873076934371302E-5 0.0 0.0 3.5536079779877077 0.0018059711573191754 82-83 5.873076934371302E-5 0.0 0.0 3.880547488231822 0.001908750003670673 84-85 7.341346167964128E-5 0.0 0.0 4.212009267715402 0.001908750003670673 86-87 8.809615401556952E-5 0.0 0.0 4.570619345328114 0.002011528850022171 88-89 8.809615401556952E-5 0.0 0.0 4.966758384551459 0.0021143076963736685 90-91 8.809615401556952E-5 0.0 0.0 5.3882984815159585 0.0021143076963736685 92-93 8.809615401556952E-5 0.0 0.0 5.828749886209135 0.0021730384657173817 94-95 8.809615401556952E-5 0.0 0.0 6.2748541274516425 0.0021730384657173817 96-97 8.809615401556952E-5 0.0 0.0 6.744524089893316 0.0025694711587874444 98-99 8.809615401556952E-5 0.0 0.0 7.2562599658774225 0.0028190769284982247 100-101 8.809615401556952E-5 0.0 0.0 7.808769678478403 0.0028190769284982247 102-103 8.809615401556952E-5 0.0 0.0 8.376696218032109 0.0028924903901778663 104-105 8.809615401556952E-5 0.0 0.0 8.938720315266771 0.0029659038518575075 106-107 8.809615401556952E-5 0.0 0.0 9.51535369137568 0.0029659038518575075 108-109 8.809615401556952E-5 0.0 0.0 10.11878298099766 0.0029659038518575075 110-111 8.809615401556952E-5 0.0 0.0 10.766877020705532 0.0029659038518575075 112-113 1.1746153868742604E-4 0.0 0.0 11.439784810461123 0.0029659038518575075 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 10535 0.0 32.636646 1 GGTATCA 7775 0.0 29.583609 1 TCAACGC 13160 0.0 26.162336 4 ATCAACG 13280 0.0 25.924782 3 CAACGCA 13345 0.0 25.681295 5 AACGCAG 13610 0.0 25.263865 6 CATGGGG 8305 0.0 24.67308 4 TATCAAC 13980 0.0 24.665306 2 GTACATG 14960 0.0 24.138224 1 TACATGG 14855 0.0 24.094448 2 ACATGGG 15135 0.0 22.707993 3 ACGCAGA 15335 0.0 22.306921 7 CGCAGAG 15690 0.0 21.689732 8 AGTACTT 7810 0.0 20.87617 12-13 TATACCG 325 1.4571924E-8 20.138275 5 GAGTACT 7440 0.0 19.714933 12-13 GCAGAGT 17555 0.0 18.945446 9 AGAGTAC 15625 0.0 18.94421 10-11 ATGGGGA 4620 0.0 17.901352 5 GTACTTT 8230 0.0 17.750187 14-15 >>END_MODULE