##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920957_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2625013 Sequences flagged as poor quality 0 Sequence length 125 %GC 47 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 26.881181540815227 31.0 27.0 31.0 10.0 34.0 2 26.981114379243074 31.0 27.0 33.0 10.0 34.0 3 27.05145498327056 31.0 27.0 33.0 10.0 34.0 4 30.331774356926996 35.0 30.0 37.0 10.0 37.0 5 30.388499790286755 35.0 30.0 37.0 10.0 37.0 6 30.315926054461446 35.0 30.0 37.0 8.0 37.0 7 30.163463571418504 35.0 30.0 37.0 8.0 37.0 8 30.13037649718306 35.0 30.0 37.0 7.0 37.0 9 31.1511188706494 37.0 30.0 39.0 7.0 39.0 10-11 31.060691128005843 37.0 30.0 39.0 2.0 39.0 12-13 30.972532516981822 37.0 30.0 39.0 2.0 39.0 14-15 31.705600696072743 38.0 30.0 40.0 2.0 41.0 16-17 31.53966685117369 37.0 30.0 40.0 2.0 41.0 18-19 31.62713898940691 37.5 30.0 40.0 2.0 41.0 20-21 31.62239501290089 38.0 30.0 40.0 2.0 41.0 22-23 31.550661082440353 37.5 30.0 40.0 2.0 41.0 24-25 31.438009830808458 37.0 30.0 40.0 2.0 41.0 26-27 31.242559370182164 37.0 29.5 40.0 2.0 41.0 28-29 31.1252955699648 37.0 29.0 40.0 2.0 41.0 30-31 30.96817349095033 37.0 29.0 40.0 2.0 41.0 32-33 30.826273812739213 37.0 29.0 40.0 2.0 41.0 34-35 30.61671466007978 37.0 28.0 40.0 2.0 41.0 36-37 30.450967861873444 37.0 28.0 40.0 2.0 41.0 38-39 30.306933337092048 36.5 27.0 40.0 2.0 41.0 40-41 30.1947026548059 36.0 27.0 40.0 2.0 41.0 42-43 29.971577664567757 36.0 27.0 40.0 2.0 41.0 44-45 29.784369067886523 36.0 26.5 40.0 2.0 41.0 46-47 29.56058350949119 36.0 26.0 40.0 2.0 41.0 48-49 29.36042335790337 35.5 26.0 40.0 2.0 41.0 50-51 29.120829496844397 35.0 25.5 39.5 2.0 41.0 52-53 28.936244506217683 35.0 24.5 39.0 2.0 41.0 54-55 28.70326527906719 35.0 24.0 39.0 2.0 41.0 56-57 28.477663348714845 35.0 24.0 39.0 2.0 40.0 58-59 28.215322171737817 34.0 23.0 39.0 2.0 40.0 60-61 27.998782863170582 34.0 23.0 38.5 2.0 40.0 62-63 27.860282406220463 34.0 23.0 38.0 2.0 40.0 64-65 27.630216688450687 34.0 22.0 38.0 2.0 40.0 66-67 27.361699161108916 34.0 22.0 37.5 2.0 40.0 68-69 27.05924161137488 34.0 22.0 37.0 2.0 40.0 70-71 26.739714050939938 33.0 21.0 36.5 2.0 39.0 72-73 26.46834891865297 33.0 20.0 36.0 2.0 39.0 74-75 26.169786397248316 33.0 20.0 35.5 2.0 38.5 76-77 25.901045251966373 33.0 19.5 35.0 2.0 37.5 78-79 25.60065912054531 32.5 18.0 35.0 2.0 37.0 80-81 25.299351660353683 32.0 17.5 35.0 2.0 36.5 82-83 25.04246702778234 32.0 16.0 35.0 2.0 36.0 84-85 24.804136779513094 32.0 13.0 35.0 2.0 36.0 86-87 24.739378624029673 32.0 12.0 35.0 2.0 35.0 88-89 24.82834980245812 32.0 12.0 35.0 2.0 35.0 90-91 24.7339310319606 32.0 10.5 35.0 2.0 35.0 92-93 24.57607048041286 32.0 7.0 35.0 2.0 35.0 94-95 24.478274393307764 32.0 7.0 35.0 2.0 35.0 96-97 24.372609392791578 32.0 7.0 35.0 2.0 35.0 98-99 24.291576460764194 32.0 3.5 35.0 2.0 35.0 100-101 24.103754914737564 32.0 2.0 35.0 2.0 35.0 102-103 22.882752580653886 29.5 2.0 34.0 2.0 34.5 104-105 23.78830523886929 31.5 2.0 34.5 2.0 35.0 106-107 23.946413598713605 32.0 2.0 35.0 2.0 35.0 108-109 23.920519250761807 32.0 2.0 35.0 2.0 35.0 110-111 23.796005391211395 32.0 2.0 35.0 2.0 35.0 112-113 23.67794083305492 32.0 2.0 35.0 2.0 35.0 114-115 23.519026953390323 32.0 2.0 35.0 2.0 35.0 116-117 23.35942507713295 32.0 2.0 35.0 2.0 35.0 118-119 23.13289534185164 32.0 2.0 35.0 2.0 35.0 120-121 22.87498138104459 32.0 2.0 35.0 2.0 35.0 122-123 22.598624463955034 32.0 2.0 35.0 2.0 35.0 124-125 21.476816495765924 30.5 2.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 245078.0 3 32908.0 4 20777.0 5 19365.0 6 21660.0 7 22788.0 8 22863.0 9 24148.0 10 24652.0 11 24692.0 12 24855.0 13 24304.0 14 24347.0 15 21676.0 16 18438.0 17 16323.0 18 15517.0 19 15118.0 20 15700.0 21 16802.0 22 20032.0 23 26328.0 24 33977.0 25 42417.0 26 49325.0 27 55456.0 28 63684.0 29 72883.0 30 83910.0 31 97660.0 32 116317.0 33 140810.0 34 176913.0 35 231243.0 36 329006.0 37 351019.0 38 81968.0 39 54.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.393772755577 18.311889643692535 12.270157716107958 25.024179884622512 2 16.033765724094177 20.192375469365285 38.201866602147796 25.571992204392746 3 19.064689538075577 24.584440247948873 28.78286640969482 27.568003804280732 4 13.26249738994722 16.120448029848337 35.26063186901116 35.35642271119328 5 14.282100187377935 37.609700675368295 33.69606216771659 14.412136969537178 6 33.67376638734088 35.42149543676464 16.659275886398373 14.245462289496103 7 28.66107607040921 32.42752822600923 20.752802790523315 18.158592913058254 8 26.695287832055296 35.22129146500543 19.506953503114826 18.57646719982445 9 26.743041833003993 15.922705954466718 18.790774788118725 38.54347742441057 10-11 25.250025096323213 26.295746501801126 27.147478567168527 21.30674983470714 12-13 25.75912624000207 23.861110624300423 26.99728054849257 23.38248258720494 14-15 23.37745678910286 25.230980986081423 24.20928358322106 27.182278641594653 16-17 23.355796000530297 27.946096456005986 25.239966658387136 23.45814088507658 18-19 23.59503948839843 27.091690836402048 26.617883388320397 22.695386286879124 20-21 24.403309693031648 26.325481085726825 26.241592047837326 23.029617173404205 22-23 24.005318883483994 26.054814747653985 25.962795244319302 23.97707112454271 24-25 23.700054838795083 26.34536478846492 26.049208627995824 23.905371744744173 26-27 23.659906029563334 26.232235779814246 26.210254613901963 23.89760357672046 28-29 23.680115660777908 26.46319360513235 26.25362511393215 23.603065620157587 30-31 24.07317247852933 26.340564637543352 25.96157069626541 23.624692187661907 32-33 23.606530710514576 26.487240253667316 25.885300377560032 24.02092865825807 34-35 23.77300251217035 26.388532250948828 26.143525160944247 23.69494007593658 36-37 23.96999585868634 26.183312753760234 26.058082781316923 23.788608606236505 38-39 23.86235063661583 26.33292748804369 25.957552341470812 23.847169533869668 40-41 23.894096757271768 26.308838044922993 26.099769865000926 23.697295332804313 42-43 23.951256781346768 26.31862562927641 25.916863988674788 23.813253600702037 44-45 23.873324749140945 26.260695319583387 25.939759541025076 23.926220390250595 46-47 23.821899257592868 26.37448579428113 25.932085979616193 23.871528968509807 48-49 23.7591250330486 26.399546348424828 25.8275864959035 24.01374212262307 50-51 23.58527658971364 26.54321340425905 25.869388635274344 24.00212137075297 52-53 23.833886104082428 26.377641089876487 25.6656106497704 24.122862156270692 54-55 23.825537360062384 26.39061427979866 25.555360000670476 24.228488359468482 56-57 23.82545484190414 26.30270679432862 25.605717778496086 24.266120585271157 58-59 23.901979340250396 26.136156695293455 25.712126649735943 24.249737314720203 60-61 23.871733582172425 26.165323708913885 25.875970170547347 24.086972538366343 62-63 23.725959340424886 26.200013715748728 25.913240269438266 24.160786674388124 64-65 23.708998487657137 26.125813439106533 25.876588326709495 24.28859974652684 66-67 23.841756793307454 26.27675704092556 25.73077816846412 24.150707997302867 68-69 23.942477753893247 25.9390128566925 25.82030345946842 24.298205929945834 70-71 23.694766952909795 25.909108139404424 25.98080702390007 24.415317883785708 72-73 23.941853042325498 25.893470649631794 25.88931778536512 24.275358522677593 74-75 23.74975594842964 26.08173656144909 25.89716214452996 24.27134534559131 76-77 23.95220986698169 25.773978210094796 26.03518049872437 24.238631424199145 78-79 23.970910503894757 25.867670602218475 25.94761338322535 24.21380551066142 80-81 23.920681492583203 25.809887707482858 25.98970507475469 24.27972572517925 82-83 23.934032095943063 25.834489376749897 25.970566940961497 24.26091158634554 84-85 23.82562460940186 25.913278212923867 25.85282062095318 24.408276556721088 86-87 23.80715068545865 25.785487056363575 25.97882863086009 24.428533627317684 88-89 23.80287259529762 25.69497751058757 26.01663306048389 24.485516833630918 90-91 23.75857142857143 25.73013333333333 26.122780952380953 24.388514285714287 92-93 23.868654157538813 25.767387370225737 26.030460043813697 24.333498428421755 94-95 23.607057646974784 25.739324237445533 26.170478843726936 24.483139271852753 96-97 23.769604486304598 25.58641308022946 26.170211752738936 24.473770680727007 98-99 23.68548372042879 25.68712030619697 25.993599182011877 24.63379679136236 100-101 23.58322901459802 25.843638678129377 26.06820892653402 24.504923380738585 102-103 23.35650654955287 25.828735359584883 26.22158471272546 24.59317337813679 104-105 23.30967500933881 25.937495773485086 26.04718038356087 24.70564883361523 106-107 23.219955443399897 26.026842170036733 26.168296230139752 24.584906156423614 108-109 23.28074994666098 26.025957054466765 26.17073440214575 24.52255859672651 110-111 23.145148230775533 26.225825933384268 26.014277249943323 24.61474858589688 112-113 23.18553256658273 26.2880533957096 26.020560548281285 24.505853489426386 114-115 23.24464103747678 26.380072990211644 25.975363469879298 24.39992250243228 116-117 23.184707018109307 26.197102449751185 26.06168456872386 24.55650596341565 118-119 23.24173130163829 26.082901660997177 25.97316285117467 24.702204186189864 120-121 23.17726043022723 26.22450328577541 26.08645461995376 24.511781664043607 122-123 23.165263182357968 26.2645359967723 25.95591930285887 24.614281518010863 124-125 23.22229530016899 26.317856796404694 25.812545346814147 24.647302556612168 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1845.0 1 1227.5 2 513.0 3 360.0 4 282.0 5 262.0 6 264.5 7 320.0 8 415.5 9 448.5 10 447.0 11 487.5 12 542.0 13 590.0 14 667.0 15 762.0 16 889.0 17 1063.5 18 1254.0 19 1446.0 20 1740.5 21 2161.5 22 2710.5 23 3494.0 24 4548.0 25 5979.0 26 8246.0 27 11074.0 28 13452.5 29 16380.5 30 19900.0 31 24146.5 32 28905.5 33 32454.5 34 36342.0 35 40227.5 36 44278.0 37 49720.0 38 54415.0 39 57457.0 40 61070.0 41 65792.0 42 70679.5 43 76997.5 44 82526.0 45 87914.5 46 93560.5 47 97479.0 48 101770.5 49 106677.0 50 112973.0 51 115860.0 52 113503.5 53 111168.0 54 108193.0 55 102774.0 56 95977.0 57 89422.5 58 84018.5 59 76381.5 60 65420.5 61 53673.0 62 43014.5 63 33364.5 64 25111.0 65 19261.5 66 14507.5 67 10767.0 68 7947.0 69 6055.0 70 4843.0 71 3788.0 72 2877.5 73 2324.5 74 1831.5 75 1419.0 76 1055.5 77 718.0 78 460.5 79 294.0 80 199.0 81 131.5 82 84.0 83 66.0 84 49.5 85 32.0 86 26.0 87 23.0 88 18.5 89 12.0 90 7.5 91 8.0 92 9.0 93 8.5 94 7.5 95 9.0 96 11.5 97 9.5 98 9.5 99 9.5 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03546649102309208 2 0.01744753264079073 3 0.022895124709858578 4 0.020761801941552287 5 0.014133263340029172 6 0.0046095009815189485 7 0.004914261376991276 8 0.0056761623656720935 9 0.002895223756987108 10-11 0.004819023753406173 12-13 0.008342815826054957 14-15 0.002571415836797761 16-17 0.0024761782132126584 18-19 5.714257415106135E-5 20-21 0.004457120783782785 22-23 9.904712852850633E-4 24-25 0.001771419798682902 26-27 0.0014666594032105745 28-29 0.003638077220950906 30-31 0.0014095168290595133 32-33 0.0 34-35 0.007276154441901812 36-37 0.009219001963037897 38-39 0.001485706927927595 40-41 0.0012190415818893086 42-43 0.002799986133402006 44-45 0.0012571366313233498 46-47 0.0219808435234416 48-49 0.003466649498497722 50-51 0.011238039583042064 52-53 0.0020952277188722493 54-55 1.5238019773616357E-4 56-57 2.8571287075530676E-4 58-59 0.007580914837374138 60-61 8.952336616999612E-4 62-63 0.011161849484173984 64-65 0.010571376217946349 66-67 1.142851483021227E-4 68-69 0.004399978209631724 70-71 0.005580924742086992 72-73 0.012133273244742025 74-75 0.00211427524358927 76-77 0.0013714217796254723 78-79 3.9999801905742945E-4 80-81 0.004857118802840215 82-83 0.0015047544526446154 84-85 0.0012380891066063292 86-87 0.014609451457954685 88-89 0.0 90-91 4.952356426425316E-4 92-93 0.010018998001152756 94-95 0.0076380574115251995 96-97 0.005161879198312541 98-99 0.0013714217796254723 100-101 0.01693324947343118 102-103 0.008209483153035813 104-105 0.008171388103601773 106-107 0.018514194024943878 108-109 0.011161849484173984 110-111 0.02125703758419482 112-113 0.003161889103025395 114-115 0.015790397990409953 116-117 0.006666633650957156 118-119 0.005485687118501889 120-121 0.008152340578884752 122-123 0.008990431666433651 124-125 0.05647591078596563 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 2625013.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.491044525362696 #Duplication Level Percentage of deduplicated Percentage of total 1 73.30389774597322 37.01190364974568 2 11.683382519889486 11.798123740371686 3 5.297179600770441 8.023803932440298 4 2.9188473802174553 5.895026121491911 5 1.7869715859395359 4.511303095561554 6 1.1734892015912501 3.555041731654568 7 0.8017098323373112 2.8335416788674963 8 0.5640451315527489 2.2783382281235123 9 0.42028268722065193 1.9098460686327319 >10 1.9403373151107504 16.216221912495087 >50 0.0797449531551588 2.7137768944316 >100 0.02904241598814508 2.51807967160707 >500 5.348151269460689E-4 0.2046084253587013 >1k 5.348151269452298E-4 0.5303848492182325 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 2958 0.11268515622589298 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA 2947 0.11226611068211852 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 3.80950494340409E-5 0.0 2 0.0 0.0 0.0 3.80950494340409E-5 0.0 3 0.0 0.0 0.0 3.80950494340409E-5 0.0 4 0.0 0.0 0.0 7.61900988680818E-5 0.0 5 3.80950494340409E-5 0.0 0.0 7.61900988680818E-5 0.0 6 3.80950494340409E-5 0.0 0.0 7.61900988680818E-5 0.0 7 3.80950494340409E-5 0.0 0.0 7.61900988680818E-5 0.0 8 3.80950494340409E-5 0.0 0.0 7.61900988680818E-5 0.0 9 3.80950494340409E-5 0.0 0.0 7.61900988680818E-5 0.0 10-11 3.80950494340409E-5 0.0 0.0 7.61900988680818E-5 0.0 12-13 3.80950494340409E-5 0.0 0.0 9.523762358510225E-5 0.0 14-15 3.80950494340409E-5 0.0 0.0 1.3333267301914313E-4 0.0 16-17 3.80950494340409E-5 0.0 0.0 1.7142772245318404E-4 0.0 18-19 3.80950494340409E-5 0.0 0.0 2.2857029660424538E-4 0.0 20-21 3.80950494340409E-5 0.0 0.0 3.0476039547232714E-4 0.0 22-23 3.80950494340409E-5 0.0 0.0 9.142811864169815E-4 0.0 24-25 3.80950494340409E-5 0.0 0.0 0.00211427524358927 0.0 26-27 3.80950494340409E-5 0.0 0.0 0.0034476019737807013 0.0 28-29 3.80950494340409E-5 0.0 0.0 0.007447582164354996 0.0 30-31 3.80950494340409E-5 0.0 0.0 0.020323708873060817 0.0 32-33 3.80950494340409E-5 0.0 0.0 0.04742833654538092 0.0 34-35 3.80950494340409E-5 0.0 0.0 0.08445672459526866 0.0 36-37 3.80950494340409E-5 0.0 0.0 0.1450088056706767 0.0 38-39 3.80950494340409E-5 0.0 0.0 0.24323689063635112 0.0 40-41 3.80950494340409E-5 0.0 0.0 0.35169349637506553 0.0 42-43 3.80950494340409E-5 0.0 0.0 0.4478454011465848 0.0 44-45 3.80950494340409E-5 0.0 0.0 0.556073436588695 0.0 46-47 3.80950494340409E-5 0.0 0.0 0.689253729410102 0.0 48-49 3.80950494340409E-5 0.0 0.0 0.8256340063839684 0.0 50-51 3.80950494340409E-5 0.0 0.0 0.9669094972101091 0.0 52-53 3.80950494340409E-5 0.0 0.0 1.110375453378707 0.0 54-55 3.80950494340409E-5 0.0 0.0 1.2661080154650661 0.0 56-57 3.80950494340409E-5 0.0 0.0 1.4457071260218521 0.0 58-59 3.80950494340409E-5 0.0 0.0 1.6421823434779181 0.0 60-61 3.80950494340409E-5 0.0 0.0 1.8469813292353219 0.0 62-63 3.80950494340409E-5 0.0 0.0 2.0481803328212087 0.0 64-65 3.80950494340409E-5 0.0 0.0 2.2632268868763696 0.0 66-67 3.80950494340409E-5 0.0 0.0 2.5134732666085844 0.0 68-69 3.80950494340409E-5 0.0 0.0 2.801928980923142 0.0 70-71 3.80950494340409E-5 0.0 0.0 3.1064417585741477 0.0 72-73 3.80950494340409E-5 0.0 0.0 3.4093164490994905 0.0 74-75 3.80950494340409E-5 0.0 0.0 3.7105721000238856 0.0 76-77 3.80950494340409E-5 0.0 0.0 4.046399008309673 0.0 78-79 3.80950494340409E-5 0.0 0.0 4.425882843246871 0.0 80-81 3.80950494340409E-5 0.0 0.0 4.836680808818851 0.0 82-83 3.80950494340409E-5 3.80950494340409E-5 0.0 5.256164445661793 0.0 84-85 3.80950494340409E-5 3.80950494340409E-5 0.0 5.681438530018708 0.0 86-87 3.80950494340409E-5 3.80950494340409E-5 0.0 6.141760059854942 0.0 88-89 3.80950494340409E-5 3.80950494340409E-5 0.0 6.64328138565409 0.0 90-91 3.80950494340409E-5 3.80950494340409E-5 0.0 7.181469196533502 0.0 92-93 5.7142574151061346E-5 3.80950494340409E-5 0.0 7.741447375689187 0.0 94-95 1.1428514830212269E-4 3.80950494340409E-5 0.0 8.299273184551847 0.0 96-97 1.1428514830212269E-4 3.80950494340409E-5 0.0 8.880965541884937 0.0 98-99 1.1428514830212269E-4 3.80950494340409E-5 0.0 9.509305287250006 0.0 100-101 1.5238019773616357E-4 3.80950494340409E-5 0.0 10.194425703796515 0.0 102-103 1.9047524717020448E-4 3.80950494340409E-5 0.0 10.889203215374554 0.0 104-105 1.9047524717020448E-4 3.80950494340409E-5 0.0 11.588171182390335 0.0 106-107 1.9047524717020448E-4 3.80950494340409E-5 0.0 12.28527249198385 0.0 108-109 1.9047524717020448E-4 3.80950494340409E-5 0.0 13.010316520337234 1.904752471702045E-5 110-111 1.9047524717020448E-4 3.80950494340409E-5 0.0 13.794541207986398 3.80950494340409E-5 112-113 1.9047524717020448E-4 3.80950494340409E-5 0.0 14.602670539155426 3.80950494340409E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CATGGGG 7110 0.0 26.946796 4 GTACATG 13480 0.0 25.519648 1 TACATGG 13585 0.0 24.747679 2 GTATCAA 9045 0.0 24.017124 1 ACATGGG 13525 0.0 23.625141 3 TCAACGC 10170 0.0 21.00363 4 AACGCAG 10380 0.0 20.462496 6 CAACGCA 10530 0.0 20.284397 5 TATCAAC 10685 0.0 20.1595 2 ATGGGGA 3855 0.0 19.755209 5 ATCAACG 10855 0.0 19.35006 3 GTATTAG 850 0.0 18.905212 1 ACGCAGA 11440 0.0 18.358469 7 CGCAGAG 11850 0.0 17.673073 8 GGTATCA 7345 0.0 16.773174 1 GAGTACT 3470 0.0 16.459517 12-13 ATGGGGG 4105 0.0 15.508387 5 GTATTAT 1115 0.0 15.479605 1 GCAGAGT 12820 0.0 15.4077 9 GTATAAT 1315 0.0 15.388272 1 >>END_MODULE