##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920954_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2446570 Sequences flagged as poor quality 0 Sequence length 125 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.73670199503795 31.0 28.0 31.0 12.0 34.0 2 27.868479953567647 31.0 28.0 33.0 15.0 34.0 3 27.959899369321132 31.0 28.0 34.0 15.0 34.0 4 31.37187327564713 35.0 32.0 37.0 16.0 37.0 5 31.423595891390804 35.0 32.0 37.0 16.0 37.0 6 31.35656980997887 35.0 32.0 37.0 16.0 37.0 7 31.210514311873357 35.0 32.0 37.0 13.0 37.0 8 31.133501596112108 35.0 32.0 37.0 11.0 37.0 9 32.29897652632052 37.0 32.0 39.0 10.0 39.0 10-11 32.22095402951888 37.0 32.0 39.0 10.0 39.0 12-13 32.128856317211444 37.0 32.0 39.0 10.0 39.0 14-15 32.96873868313598 38.0 32.0 40.0 10.0 41.0 16-17 32.846125391875155 38.0 32.0 40.0 10.0 41.0 18-19 32.902480411351405 38.0 32.0 40.0 10.0 41.0 20-21 32.919421680148126 38.0 32.0 40.0 8.5 41.0 22-23 32.84988759773887 38.0 31.5 40.0 8.0 41.0 24-25 32.76474635918858 38.0 31.5 40.0 8.0 41.0 26-27 32.61312143122821 38.0 31.0 40.0 7.5 41.0 28-29 32.52965110338147 38.0 31.0 40.0 2.0 41.0 30-31 32.38949038858483 38.0 31.0 40.0 2.0 41.0 32-33 32.29920644003646 38.0 30.0 40.0 2.0 41.0 34-35 32.12251744278725 38.0 30.0 40.0 2.0 41.0 36-37 31.961206914169637 38.0 30.0 40.0 2.0 41.0 38-39 31.81839820646865 38.0 30.0 40.0 2.0 41.0 40-41 31.731479172882853 38.0 30.0 40.0 2.0 41.0 42-43 31.509104991886602 37.0 30.0 40.0 2.0 41.0 44-45 31.339156860420914 37.0 30.0 40.0 2.0 41.0 46-47 31.131456896798376 37.0 29.5 40.0 2.0 41.0 48-49 30.955379163481936 37.0 29.0 40.0 2.0 41.0 50-51 30.710886874277048 36.5 28.5 40.0 2.0 41.0 52-53 30.523598139436025 36.0 28.0 40.0 2.0 41.0 54-55 30.3129544627785 36.0 28.0 40.0 2.0 41.0 56-57 30.100146940410454 35.5 28.0 39.0 2.0 41.0 58-59 29.837535406712256 35.0 28.0 39.0 2.0 41.0 60-61 29.650976877833045 35.0 27.5 39.0 2.0 40.5 62-63 29.53849266524154 35.0 28.0 39.0 2.0 41.0 64-65 29.30504359164054 35.0 27.0 39.0 2.0 40.0 66-67 29.04074459345124 34.5 26.5 38.0 2.0 40.0 68-69 28.739431530673556 34.0 26.0 37.5 2.0 40.0 70-71 28.41605329093384 34.0 26.0 37.0 2.0 39.5 72-73 28.12943937839506 34.0 26.0 36.5 2.0 39.0 74-75 27.834640128833428 34.0 26.0 36.0 2.0 39.0 76-77 27.560571943578154 34.0 26.0 36.0 2.0 38.5 78-79 27.25129364784167 34.0 25.5 35.0 2.0 37.0 80-81 26.94985265085405 33.0 25.0 35.0 2.0 37.0 82-83 26.691635228094842 33.0 24.5 35.0 2.0 36.5 84-85 26.450313704492412 33.0 24.0 35.0 2.0 36.0 86-87 26.377731068393707 33.0 24.0 35.0 2.0 36.0 88-89 26.480212297216102 33.0 25.0 35.0 2.0 35.0 90-91 26.397553718062433 33.0 25.0 35.0 2.0 35.0 92-93 26.251167961676963 33.0 24.0 35.0 2.0 35.0 94-95 26.167285832819008 33.0 24.0 35.0 2.0 35.0 96-97 26.075206717976595 33.0 24.0 35.0 2.0 35.0 98-99 26.013143094209447 33.0 23.5 35.0 2.0 35.0 100-101 25.85184891501163 33.0 23.0 35.0 2.0 35.0 102-103 24.57630826013562 31.0 19.5 34.0 2.0 35.0 104-105 25.55875368372865 32.5 20.5 35.0 2.0 35.0 106-107 25.730653322815208 33.0 23.0 35.0 2.0 35.0 108-109 25.73044139346105 33.0 22.0 35.0 2.0 35.0 110-111 25.63839456872274 33.0 20.0 35.0 2.0 35.0 112-113 25.55391813845506 33.0 19.5 35.0 2.0 35.0 114-115 25.437881810044267 33.0 19.0 35.0 2.0 35.0 116-117 25.30105433320935 33.0 18.5 35.0 2.0 35.0 118-119 25.11172355583531 33.0 16.5 35.0 2.0 35.0 120-121 24.90633172155303 33.0 6.0 35.0 2.0 35.0 122-123 24.678666663941762 33.0 2.0 35.0 2.0 35.0 124-125 23.550992409781855 31.5 2.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 180296.0 3 24965.0 4 15622.0 5 13520.0 6 14532.0 7 16021.0 8 17385.0 9 18538.0 10 18918.0 11 19276.0 12 19489.0 13 19498.0 14 19260.0 15 17297.0 16 15160.0 17 13525.0 18 12411.0 19 11847.0 20 12087.0 21 13120.0 22 15591.0 23 20672.0 24 28044.0 25 35882.0 26 41913.0 27 47421.0 28 55387.0 29 64244.0 30 73421.0 31 87158.0 32 105971.0 33 130496.0 34 167126.0 35 227846.0 36 343794.0 37 405244.0 38 103501.0 39 92.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.4410963922565 18.601526637656 12.984720130740174 24.97265683934733 2 16.017256378139198 19.481981613691293 39.424847353084495 25.075914655085015 3 19.883583403889464 23.554655416932572 27.84971482512777 28.712046354050198 4 12.94975440346513 15.51916634131684 35.41626721884153 36.1148120363765 5 14.648625447112929 36.95558507920286 33.71070005109862 14.68508942258559 6 34.51995654139481 34.766720649295756 16.646951153214474 14.066371656094956 7 30.0608060273014 31.085548635829284 20.028915154418534 18.824730182450782 8 26.547132676189328 35.2470625744703 19.28917265665077 18.916632092689596 9 26.419587468317022 16.410239431547804 18.70972567783485 38.46044742230032 10-11 25.763436122177573 25.79059786699574 26.873470619024136 21.572495391802548 12-13 26.329664768719784 22.950373720244986 27.097175438922783 23.622786072112444 14-15 23.363626089279258 24.489023057087948 24.39080168950562 27.75654916412717 16-17 24.086063829917684 27.72672594238459 24.824741787664422 23.362468440033304 18-19 23.890154720785457 26.63377297631356 26.449330971113216 23.02674133178777 20-21 24.51332316911167 25.992421796124244 26.133930651668308 23.360324383095783 22-23 24.224284266764545 25.70997001079481 25.92580481797407 24.13994090446658 24-25 24.05642851566444 25.808563887859087 26.189368693361086 23.945638903115395 26-27 23.870956534534486 26.060599867568072 25.969757289886942 24.098686308010496 28-29 23.937054123325243 26.154208364593796 26.219791462507168 23.688946049573794 30-31 23.87634335534067 25.953160238010327 26.0056631170851 24.1648332895639 32-33 23.779147949987127 25.99582272324111 26.030994412585784 24.194034914185984 34-35 24.227274724623406 25.977238191686027 25.859372205741238 23.936114877949333 36-37 24.106101058145153 25.877619942908026 25.861657735528908 24.154621263417912 38-39 24.122352383365897 26.029821707390845 25.991318351631282 23.856507557611977 40-41 24.130197402747097 25.896176508396636 25.984566408200294 23.989059680655977 42-43 24.18072304422982 25.798165310112292 25.795120164707626 24.225991480950267 44-45 24.224360429838725 25.984638340059483 25.67939161564745 24.11160961445434 46-47 23.98395147504284 26.20452343881428 25.61153420276471 24.19999088337817 48-49 24.272192689217025 26.103924795714057 25.654202446383305 23.969680068685612 50-51 24.037400491307086 26.27219573471543 25.605135689909563 24.08526808406792 52-53 24.397914768577163 26.09353458089162 25.36327849259709 24.145272157934127 54-55 24.057290142420147 25.974775235800085 25.639876986663744 24.328057635116025 56-57 24.133805614731518 26.263915434053636 25.564158550522283 24.038120400692563 58-59 24.18852788035405 25.90822582240647 25.70409063373471 24.199155663504765 60-61 24.24701140503509 25.86208094578858 25.81822328657772 24.07268436259861 62-63 24.060615239406815 26.059471902715416 25.758329199621393 24.121583658256377 64-65 23.942296313389203 25.705900543488593 25.792397618387252 24.559405524734952 66-67 23.997616252644523 26.251957844621526 25.523018366953217 24.227407535780735 68-69 24.074093754534548 25.89236846999483 25.817506269172835 24.216031506297785 70-71 23.858670693715585 25.82903068172273 25.774870716074457 24.537427908487235 72-73 24.180658326617433 25.84647439192563 25.751739815317652 24.221127466139286 74-75 24.073174465208265 25.916331107261225 25.576626385913308 24.433868041617202 76-77 24.06502882022247 25.75541191541054 25.864034438755702 24.31552482561129 78-79 24.08923707824226 25.924036653074122 25.779956890517568 24.20676937816605 80-81 23.96192245884549 26.03326450659856 25.733507488202957 24.271305546353 82-83 24.146341214182872 26.03948224892885 25.546970878290487 24.267205658597796 84-85 24.106381943828495 25.861961142722613 25.481505945327754 24.55015096812114 86-87 23.995271094483268 25.807650296455936 25.939976257362346 24.25710235169845 88-89 23.984844087845435 25.675496715810297 25.842056430022442 24.49760276632183 90-91 23.84297701383862 25.99056470741151 25.973704292436846 24.192753986313022 92-93 23.912118421359207 25.823389060502794 25.880984293955606 24.383508224182396 94-95 23.779073225256145 25.871284714607672 25.924300731208184 24.425341328928006 96-97 24.096880970346614 25.706692837750456 25.896517670795344 24.29990852110759 98-99 23.781559249375345 25.68021323096329 25.789571351319758 24.74865616834161 100-101 23.613136373577632 25.77938708642233 26.063584724785738 24.5438918152143 102-103 23.86040899213703 25.66035699745422 25.898236758932704 24.580997251476045 104-105 23.830611974198202 25.742795028732818 25.881528446584262 24.545064550484717 106-107 23.662026472490375 25.849718865716987 25.907523704480734 24.580730957311903 108-109 23.704450247226873 25.835678336908746 25.856893738227292 24.602977677637085 110-111 23.42892452550191 25.9161992239927 26.093419309262742 24.56145694124265 112-113 23.667403021568884 25.929318513041327 25.852719618411612 24.550558846978177 114-115 23.50731305107465 26.11431080232013 25.765735456371257 24.612640690233963 116-117 23.483054143477485 25.879012210941266 25.876028299740828 24.761905345840418 118-119 23.62692779878646 25.91552623355517 25.6211231218134 24.83642284584497 120-121 23.508598528372428 25.91038612953609 25.873188721255293 24.70782662083619 122-123 23.475673936778353 25.90239408046651 25.843552733823334 24.7783792489318 124-125 23.467631533477764 25.943173325345033 25.68279015271491 24.90640498846229 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 526.0 1 416.0 2 269.0 3 204.0 4 162.0 5 151.0 6 156.5 7 189.0 8 212.5 9 232.5 10 273.0 11 318.5 12 352.0 13 380.5 14 434.5 15 505.0 16 594.0 17 689.5 18 780.5 19 911.0 20 1089.5 21 1362.5 22 1733.0 23 2260.0 24 2978.0 25 3925.5 26 5259.0 27 7011.0 28 8931.5 29 11183.5 30 14223.0 31 18112.0 32 22530.0 33 27404.5 34 32019.5 35 35710.5 36 40239.5 37 45570.0 38 50263.5 39 53488.0 40 57278.5 41 63324.0 42 70021.0 43 76479.0 44 81575.0 45 86123.0 46 90367.0 47 94545.0 48 101391.5 49 106773.0 50 110175.5 51 110905.5 52 106814.0 53 104473.5 54 103168.0 55 98216.0 56 90027.5 57 80951.0 58 73622.0 59 66337.5 60 57326.0 61 47571.0 62 39070.5 63 32034.5 64 24830.5 65 18453.0 66 13957.5 67 10957.0 68 8375.5 69 6303.0 70 4996.0 71 4221.5 72 3547.5 73 2936.5 74 2155.5 75 1400.5 76 953.5 77 659.5 78 435.0 79 284.0 80 198.0 81 128.0 82 94.5 83 77.5 84 57.5 85 35.5 86 26.5 87 25.0 88 16.5 89 10.0 90 9.0 91 11.5 92 8.0 93 5.5 94 6.5 95 5.0 96 4.5 97 3.5 98 4.5 99 5.0 100 8.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.032821460248429433 2 0.016431166898964674 3 0.02154036058645369 4 0.01982367150745738 5 0.01307953583997188 6 0.00425084914799086 7 0.004169102048991036 8 0.005109193687489015 9 0.0027385278164941125 10-11 0.004680021417739938 12-13 0.0063149633977364235 14-15 0.0022684819972451226 16-17 0.0015123213314967485 18-19 6.131032424986819E-5 20-21 0.00326988395999297 22-23 9.400916384979789E-4 24-25 0.0016758155294963968 26-27 0.0012262064849973635 28-29 0.0022684819972451226 30-31 0.0015327581062467047 32-33 0.0 34-35 0.0060288485512370385 36-37 0.0068054459917353686 38-39 0.0012262064849973635 40-41 9.605284132479349E-4 42-43 0.0021662981234953425 44-45 0.001001401962747847 46-47 0.01996672893070707 48-49 0.002472849744744683 50-51 0.009748341555729042 52-53 0.0012670800344972758 54-55 2.4524129699947275E-4 56-57 2.4524129699947275E-4 58-59 0.006212779523986643 60-61 7.765974404983304E-4 62-63 0.009053491214230536 64-65 0.009993582852728514 66-67 8.174709899982424E-5 68-69 0.0030655162124934095 70-71 0.0046391478682400265 72-73 0.010688433194227019 74-75 0.0013692639082470562 76-77 9.80965187997891E-4 78-79 3.47425170749253E-4 80-81 0.003617309130742223 82-83 0.0011240226112475833 84-85 0.0011035858364976273 86-87 0.013815259730970298 88-89 0.0 90-91 4.496090444990334E-4 92-93 0.007643353756483567 94-95 0.0057018601552377415 96-97 0.00425084914799086 98-99 8.583445394981546E-4 100-101 0.015736316557466167 102-103 0.006785009216985413 104-105 0.006192342749236686 106-107 0.016676408195964144 108-109 0.009564410582979438 110-111 0.018760959220459665 112-113 0.002431976195244771 114-115 0.013365650686471265 116-117 0.004761768516739762 118-119 0.0038625504277416955 120-121 0.006662388568485675 122-123 0.006580641469485852 124-125 0.05425963696113334 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 2446570.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.388754154791705 #Duplication Level Percentage of deduplicated Percentage of total 1 76.2646131830354 39.95408070756327 2 12.04049174436063 12.615727237962163 3 4.571188116640128 7.184365513138949 4 2.2354867327837864 4.684574594404333 5 1.279749069020889 3.3522229678379456 6 0.7621846363782956 2.3957942121469102 7 0.5005382973387064 1.8355804463034864 8 0.3852498841540391 1.614620917528635 9 0.27862230429954765 1.3137007861791508 >10 1.5158960212414327 14.381758653644127 >50 0.10648616744701414 3.8274686066163537 >100 0.05537958749666443 5.152379945023978 >500 0.003323052764450891 1.1499512757678434 >1k 7.912030391542957E-4 0.5377741358829953 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 8.174709899982425E-5 0.0 0.0 0.0 0.0 7 2.4524129699947275E-4 0.0 0.0 0.0 0.0 8 2.4524129699947275E-4 0.0 0.0 0.0 0.0 9 2.4524129699947275E-4 0.0 0.0 0.0 0.0 10-11 3.26988395999297E-4 0.0 0.0 0.0 0.0 12-13 3.47425170749253E-4 0.0 0.0 4.0873549499912125E-5 0.0 14-15 4.496090444990333E-4 0.0 0.0 8.174709899982425E-5 0.0 16-17 4.904825939989455E-4 0.0 0.0 1.0218387374978031E-4 0.0 18-19 6.131032424986819E-4 0.0 0.0 1.634941979996485E-4 0.0 20-21 7.357238909984181E-4 0.0 0.0 2.0436774749956063E-4 0.0 22-23 8.583445394981545E-4 0.0 0.0 3.065516212493409E-4 0.0 24-25 0.0010627122869977153 0.0 0.0 5.517929182488137E-4 0.0 26-27 0.0011035858364976273 0.0 0.0 7.970342152482863E-4 0.0 28-29 0.001369263908247056 0.0 0.0 0.0018801832769959575 0.0 30-31 0.0015940684304965728 0.0 0.0 0.006151469199736774 0.0 32-33 0.0015940684304965728 0.0 0.0 0.015123213314967486 0.0 34-35 0.001737125853746265 0.0 0.0 0.02754877236294077 0.0 36-37 0.001961930375995782 0.0 0.0 0.047495064518897886 0.0 38-39 0.0021662981234953425 0.0 0.0 0.08315723645757121 0.0 40-41 0.0022071716729952545 0.0 0.0 0.12611533698197885 0.0 42-43 0.002350229096244947 0.0 0.0 0.16410730124214717 0.0 44-45 0.0025750336184944636 4.0873549499912125E-5 0.0 0.20947694118704963 0.0 46-47 0.0032494471852430136 4.0873549499912125E-5 0.0 0.26512627883118 0.0 48-49 0.003433378157992618 4.0873549499912125E-5 0.0 0.3227171100765561 0.0 50-51 0.003433378157992618 4.0873549499912125E-5 0.0 0.3859689279276701 0.0 52-53 0.003433378157992618 4.0873549499912125E-5 0.0 0.44987472257078276 0.0 54-55 0.0034742517074925305 4.0873549499912125E-5 0.0 0.5210151354753798 0.0 56-57 0.0035151252569924425 4.0873549499912125E-5 0.0 0.6004324421537091 0.0 58-59 0.0035151252569924425 4.0873549499912125E-5 0.0 0.6898842052342667 0.0 60-61 0.0035151252569924425 4.0873549499912125E-5 0.0 0.7873267472420573 0.0 62-63 0.0035559988064923546 4.0873549499912125E-5 0.0 0.8889179545240888 0.0 64-65 0.003637745905492179 4.0873549499912125E-5 0.0 0.9949439419268609 0.0 66-67 0.003964734301491476 4.0873549499912125E-5 0.0 1.117748521399347 0.0 68-69 0.003964734301491476 4.0873549499912125E-5 0.0 1.2591710026690428 0.0 70-71 0.0040669181752412565 4.0873549499912125E-5 0.0 1.4147152952909585 0.0 72-73 0.004271285922740817 4.0873549499912125E-5 0.0 1.5735907821971167 0.0 74-75 0.004373469796490597 4.0873549499912125E-5 0.0 1.7392512783202605 0.0 76-77 0.004393906571240553 4.0873549499912125E-5 0.0 1.9240405956093634 0.0 78-79 0.0044347801207404655 4.0873549499912125E-5 0.0 2.1291031934504225 0.0 80-81 0.005047883363239147 4.0873549499912125E-5 0.0 2.3536011640786896 0.0 82-83 0.005190940786488839 4.0873549499912125E-5 0.0 2.5921391989601767 0.0 84-85 0.0053953085339884 4.0873549499912125E-5 0.0 2.838157093400148 0.0 86-87 0.0056609866057378295 4.0873549499912125E-5 0.0 3.1007287753875836 0.0 88-89 0.005722296929987697 4.0873549499912125E-5 0.0 3.3909718503864594 0.0 90-91 0.006417147271486203 4.0873549499912125E-5 0.0 3.7127693055992674 0.0 92-93 0.006621515018985764 4.0873549499912125E-5 0.0 4.0393489661035655 0.0 94-95 0.006621515018985764 4.0873549499912125E-5 0.0 4.3787833579255855 0.0 96-97 0.006621515018985764 4.0873549499912125E-5 0.0 4.726004160927339 0.0 98-99 0.007009813739234929 4.0873549499912125E-5 0.0 5.098157829124039 0.0 100-101 0.007357238909984182 4.0873549499912125E-5 0.0 5.514434494005894 0.0 102-103 0.007602480206983655 4.0873549499912125E-5 0.0 5.959670068708437 0.0 104-105 0.008706066043481281 4.0873549499912125E-5 0.0 6.3997147026244905 0.0 106-107 0.008992180889980668 4.0873549499912125E-5 0.0 6.843397082446037 0.0 108-109 0.009053491214230535 4.0873549499912125E-5 0.0 7.3023866065553005 0.0 110-111 0.00923742218698014 4.0873549499912125E-5 0.0 7.8054991273497185 0.0 112-113 0.00933960606072992 4.0873549499912125E-5 0.0 8.33943030446707 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 6000 0.0 28.664913 1 GTACATG 9350 0.0 26.478037 1 TACATGG 9545 0.0 25.557783 2 CATGGGG 6185 0.0 25.012028 4 TCAACGC 7055 0.0 24.54207 4 ATCAACG 7165 0.0 24.248335 3 GTATAGG 640 0.0 24.176722 1 AACGCAG 7165 0.0 23.748625 6 CAACGCA 7195 0.0 23.73278 5 ACATGGG 10300 0.0 23.39554 3 TATCAAC 7380 0.0 23.219421 2 GGTATCA 4465 0.0 21.858805 1 TATAGGG 480 0.0 21.072834 2 ACGCAGA 7910 0.0 21.060572 7 CGCAGAG 8180 0.0 20.365417 8 GTATAAG 1235 0.0 18.793242 1 ATGGGGA 3810 0.0 17.64619 5 GCAGAGT 8870 0.0 17.6409 9 GTATAAT 1320 0.0 17.58307 1 GTGTAGC 1505 0.0 17.398836 1 >>END_MODULE