##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920953_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3464856 Sequences flagged as poor quality 0 Sequence length 125 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.556136243468703 31.0 29.0 33.0 18.0 34.0 2 28.65536028048496 31.0 28.0 34.0 16.0 34.0 3 28.736559037374136 31.0 28.0 34.0 16.0 34.0 4 32.19309027561319 35.0 33.0 37.0 20.0 37.0 5 32.27370372679269 35.0 33.0 37.0 22.0 37.0 6 32.21565946752188 35.0 33.0 37.0 22.0 37.0 7 32.10168445672778 35.0 32.0 37.0 19.0 37.0 8 32.053090518047505 35.0 32.0 37.0 19.0 37.0 9 33.2754867734763 37.0 33.0 39.0 18.0 39.0 10-11 33.22080499160715 37.0 33.0 39.0 17.5 39.0 12-13 33.153368711426964 37.0 33.0 39.0 17.0 39.0 14-15 34.064192999651354 38.0 33.0 41.0 17.0 41.0 16-17 33.934157869764284 38.0 33.0 41.0 17.0 41.0 18-19 34.05014176635335 38.5 33.0 41.0 17.5 41.0 20-21 34.07561122309268 39.0 33.0 41.0 18.0 41.0 22-23 34.02795729461773 39.0 33.0 41.0 18.0 41.0 24-25 33.96397079705477 39.0 33.0 41.0 18.0 41.0 26-27 33.82114639107657 38.0 32.5 41.0 17.0 41.0 28-29 33.74511812323514 38.0 32.5 41.0 16.0 41.0 30-31 33.62098280563464 38.0 32.0 40.0 16.0 41.0 32-33 33.524455273177296 38.0 32.0 40.0 15.5 41.0 34-35 33.3573406802476 38.0 32.0 40.0 13.0 41.0 36-37 33.21553752883237 38.0 32.0 40.0 9.0 41.0 38-39 33.09879386040863 38.0 32.0 40.0 9.0 41.0 40-41 33.027040373395025 38.0 32.0 40.0 9.0 41.0 42-43 32.83315439371795 38.0 31.0 40.0 8.0 41.0 44-45 32.68941104623107 38.0 31.0 40.0 7.5 41.0 46-47 32.51223196577289 38.0 31.0 40.0 4.0 41.0 48-49 32.37067745383935 38.0 31.0 40.0 2.0 41.0 50-51 32.164957360421326 37.5 30.5 40.0 2.0 41.0 52-53 32.00858736986472 37.0 30.0 40.0 2.0 41.0 54-55 31.820319228273846 37.0 30.0 40.0 2.0 41.0 56-57 31.647299050811924 37.0 30.0 40.0 2.0 41.0 58-59 31.418304829984276 36.5 30.0 40.0 2.0 41.0 60-61 31.263275299175493 36.0 29.5 40.0 2.0 41.0 62-63 31.170346184661064 36.0 30.0 40.0 2.0 41.0 64-65 30.966795734079568 36.0 29.0 39.0 2.0 41.0 66-67 30.72255989859319 35.0 29.0 39.0 2.0 41.0 68-69 30.418414935570194 35.0 29.0 39.0 2.0 40.5 70-71 30.0959542041574 35.0 29.0 38.5 2.0 40.0 72-73 29.80138164472059 35.0 29.0 37.5 2.0 40.0 74-75 29.481078145816163 34.5 29.0 37.0 2.0 39.0 76-77 29.168835443666346 34.0 28.5 36.5 2.0 39.0 78-79 28.822411234406278 34.0 28.0 36.0 2.0 39.0 80-81 28.480692271193952 34.0 28.0 36.0 2.0 37.5 82-83 28.17976634526803 34.0 27.0 35.0 2.0 37.0 84-85 27.904935443204565 34.0 26.5 35.0 2.0 36.5 86-87 27.79350859025599 34.0 26.5 35.0 2.0 36.0 88-89 27.844375494970066 34.0 27.0 35.0 2.0 36.0 90-91 27.73282857931181 34.0 27.0 35.0 2.0 36.0 92-93 27.561605446229223 34.0 27.0 35.0 2.0 35.0 94-95 27.468602302664237 34.0 27.0 35.0 2.0 35.0 96-97 27.36334583601743 34.0 27.0 35.0 2.0 35.0 98-99 27.294738944417894 34.0 26.5 35.0 2.0 35.0 100-101 27.119278261491964 34.0 26.0 35.0 2.0 35.0 102-103 25.822870416548334 31.5 24.0 34.0 2.0 35.0 104-105 26.806640882045315 33.5 25.0 35.0 2.0 35.0 106-107 26.98434639130746 34.0 25.0 35.0 2.0 35.0 108-109 26.97834340012976 34.0 25.0 35.0 2.0 35.0 110-111 26.875913457875306 34.0 25.0 35.0 2.0 35.0 112-113 26.78038423530444 34.0 25.0 35.0 2.0 35.0 114-115 26.656923548915167 34.0 25.0 35.0 2.0 35.0 116-117 26.524133181869608 34.0 25.0 35.0 2.0 35.0 118-119 26.338564142348197 34.0 25.0 35.0 2.0 35.0 120-121 26.131997837716778 34.0 24.0 35.0 2.0 35.0 122-123 25.91275351702928 34.0 23.5 35.0 2.0 35.0 124-125 24.798251211594362 32.5 11.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 190616.0 3 27257.0 4 17052.0 5 15112.0 6 17055.0 7 18828.0 8 19928.0 9 21382.0 10 22461.0 11 23636.0 12 24606.0 13 25113.0 14 25649.0 15 23500.0 16 19686.0 17 17695.0 18 16648.0 19 15961.0 20 15837.0 21 17116.0 22 20572.0 23 26873.0 24 36803.0 25 46696.0 26 54747.0 27 62432.0 28 73189.0 29 84868.0 30 99231.0 31 117736.0 32 142752.0 33 177191.0 34 227790.0 35 309128.0 36 476295.0 37 686935.0 38 246140.0 39 340.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.00325144665125 19.74244800846727 13.696119946103707 24.558180598777778 2 15.03567427511957 20.297315935491003 40.98675013227929 23.68025965711013 3 18.924126017656604 24.837143188708364 29.472218645841934 26.766512147793097 4 12.268659646205718 16.748158283682045 38.088829615260266 32.89435245485197 5 13.292937643387187 37.988786501312205 35.32119307377101 13.397082781529592 6 31.909111900020203 37.15808006465206 17.770485179091985 13.16232285623575 7 27.49788870974911 32.492049830490664 21.805082451440324 18.2049790083199 8 24.844003406973094 36.659769402991756 20.24355066400474 18.252676526030413 9 25.534364474409553 16.805531103074664 19.93321346005651 37.72689096245927 10-11 24.17763585135362 26.866536439166843 28.733072878333687 20.222754831145846 12-13 24.917757829115526 24.264496305578497 28.34629124068746 22.471454624618517 14-15 22.169530122020646 25.952653593695995 25.820682827854274 26.05713345642908 16-17 22.228528523458213 28.931866981202457 26.566729830695294 22.272874664644032 18-19 22.08861554091008 28.244573005219554 28.05531544610092 21.611496007769446 20-21 23.154962326025203 27.38163133246323 27.728440863721982 21.734965477789586 22-23 22.49254328602799 27.282820905669126 27.400561152991465 22.82407465531142 24-25 22.255504446488807 27.33209950033371 27.69771813049047 22.714677922687017 26-27 22.36219588414227 27.514067475684513 27.543664985626233 22.580071654546984 28-29 22.27429880606759 27.649346897296763 27.613716816330324 22.462637480305325 30-31 22.76525058459059 27.46989885183002 27.488312517425157 22.27653804615423 32-33 22.25435919992057 27.469164663697427 27.50863239338085 22.76784374300115 34-35 22.52261639255875 27.524286122079882 27.514833461437334 22.438264023924035 36-37 22.59840921967945 27.407291312187393 27.472421692731807 22.521877775401354 38-39 22.442411821461278 27.57326000189909 27.47355776654294 22.510770410096693 40-41 22.739891131319652 27.452002147877096 27.394827402836487 22.413279317966765 42-43 22.560362205703896 27.463759154102945 27.397896224902567 22.57798241529059 44-45 22.732364163217714 27.4553367851721 27.29101367459204 22.521285377018145 46-47 22.455770445966 27.471989464638153 27.276876272140036 22.79536381725581 48-49 22.50308679567231 27.51184931241951 27.40671931488433 22.578344577023852 50-51 22.54188519871341 27.643271416260852 27.184503851133474 22.63033953389227 52-53 22.580528783539258 27.584480669383225 27.096963563424918 22.7380269836526 54-55 22.580172674166658 27.5293198160555 27.10084521708663 22.78966229269121 56-57 22.594436668731692 27.516296888594116 27.09580231285726 22.793464129816932 58-59 22.545857108180087 27.487306692420326 27.234926994900743 22.731909204498844 60-61 22.74491230743655 27.44148922660608 27.172702745760834 22.640895720196536 62-63 22.468887000854522 27.441598137224947 27.30492651410727 22.784588347813262 64-65 22.48047952614278 27.376982011996816 27.28627637408939 22.856262087771018 66-67 22.617124394184167 27.50072333526463 27.067717889866884 22.814434380684315 68-69 22.735392215492816 27.32539177678594 27.11768427420565 22.82153173351559 70-71 22.480055878176337 27.212426544442774 27.302102935913275 23.00541464146761 72-73 22.664860698987425 27.21522093036681 27.23721582708894 22.882702543556825 74-75 22.691103104552834 27.28030215898558 27.114001001789862 22.91459373467173 76-77 22.626915830451026 27.182684448467104 27.26313605109189 22.927263669989976 78-79 22.677292071597524 27.2854407006614 27.16042773108892 22.876839496652153 80-81 22.695243946067066 27.253878787275298 27.1589213586532 22.891955908004434 82-83 22.66389922454667 27.276414997408228 27.187492423831365 22.872193354213735 84-85 22.756018174117397 27.183509665371986 27.125627828882763 22.934844331627858 86-87 22.61465856767878 27.07643365695513 27.204609420406257 23.104298354959838 88-89 22.683338066574773 27.120723054580047 27.218620340931913 22.977318537913263 90-91 22.643412105609496 27.18346301705129 27.218601724754965 22.954523152584247 92-93 22.52411314999936 27.168163036398795 27.278480345868722 23.029243467733124 94-95 22.456380623616376 27.24313996011118 27.287185067380932 23.01329434889151 96-97 22.56576697227317 27.14247574461821 27.28264681306724 23.009110470041374 98-99 22.568317090294077 27.086794614723576 27.17853104817209 23.166357246810257 100-101 22.476746627909243 27.190233475474358 27.203930395399333 23.129089501217063 102-103 22.424770280743125 27.24436471639215 27.217189509186607 23.11367549367812 104-105 22.37698687531921 27.226493142962948 27.137405852571717 23.25911412914612 106-107 22.18945864319813 27.379555959687806 27.23356318355182 23.19742221356225 108-109 22.333424930522764 27.381161306114343 27.06984150992194 23.215572253440957 110-111 22.234043213444814 27.46859174178914 27.050483715249495 23.24688132951655 112-113 22.24229742405657 27.558395266613754 27.007345407316546 23.191961902013134 114-115 22.2016924416282 27.57861228561598 26.946905388148522 23.272789884607302 116-117 22.26683149327306 27.428260451052644 27.07932198654352 23.22558606913077 118-119 22.251328583025163 27.35620456390367 27.015437900243526 23.377028952827636 120-121 22.2625107913233 27.540914665491346 26.97750007288022 23.219074470305134 122-123 22.268094828572803 27.44090748962382 27.029497222796696 23.261500459006683 124-125 22.254432949620114 27.51588633941575 26.86410279993168 23.365577911032457 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 974.0 1 707.0 2 367.5 3 268.0 4 213.0 5 189.0 6 196.5 7 221.0 8 274.5 9 327.0 10 356.0 11 403.5 12 497.5 13 613.5 14 679.0 15 754.0 16 931.0 17 1118.5 18 1328.5 19 1623.0 20 2046.5 21 2698.0 22 3502.5 23 4634.5 24 6088.0 25 8075.5 26 11119.0 27 15119.0 28 19440.5 29 24970.0 30 31861.0 31 39864.5 32 49926.0 33 60811.0 34 71261.0 35 80474.0 36 89402.5 37 98014.5 38 104843.0 39 110839.0 40 117551.0 41 123263.5 42 127539.0 43 133604.5 44 139086.0 45 141981.5 46 144012.0 47 145133.0 48 146095.5 49 146756.5 50 147572.0 51 141292.0 52 127600.5 53 117293.0 54 108771.5 55 99363.0 56 88557.0 57 77635.0 58 68795.0 59 59619.0 60 49176.5 61 39219.0 62 30606.5 63 23359.0 64 17792.0 65 13707.5 66 10219.0 67 7483.5 68 5765.5 69 4407.5 70 3364.0 71 2609.5 72 2147.0 73 1867.0 74 1449.0 75 1090.0 76 822.0 77 543.0 78 361.5 79 235.5 80 127.5 81 84.0 82 66.0 83 42.5 84 36.5 85 34.5 86 20.5 87 12.5 88 13.5 89 14.0 90 15.5 91 10.5 92 7.0 93 7.0 94 5.0 95 5.0 96 7.5 97 9.5 98 10.0 99 10.5 100 16.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03368105341174352 2 0.017172430831180283 3 0.02222314578152743 4 0.02008741488823778 5 0.01327616501234106 6 0.004502351612880882 7 0.004329184243154694 8 0.005685661972676498 9 0.0024820656327420245 10-11 0.004329184243154694 12-13 0.006941125403191359 14-15 0.0021213002791458002 16-17 0.0019481329094196123 18-19 2.886122828769796E-5 20-21 0.0037519596774007345 22-23 7.359613213362979E-4 24-25 0.0012554634305148612 26-27 0.0010822960607886735 28-29 0.0025109268610297225 30-31 0.0010967266749325225 32-33 0.0 34-35 0.006436053908156646 36-37 0.007705947952815355 38-39 0.0011255879032202206 40-41 0.0011400185173640694 42-43 0.0024387737903104776 44-45 0.0010390042183571267 46-47 0.020578055769128648 48-49 0.0028284003721944 50-51 0.010289027884564324 52-53 0.0015729369416795386 54-55 1.8759798387003672E-4 56-57 2.164592121577347E-4 58-59 0.006782388647609021 60-61 6.92669478904751E-4 62-63 0.01002927682997504 64-65 0.01017358297141353 66-67 1.0101429900694285E-4 68-69 0.003694237220825339 70-71 0.005079576178634841 72-73 0.01200627096768235 74-75 0.0016595206265426325 76-77 0.0011544491315079184 78-79 4.4734903845931835E-4 80-81 0.004199308715860053 82-83 0.0012698940446587103 84-85 0.0011111572890763713 86-87 0.013636930365937286 88-89 0.0 90-91 4.6177965260316736E-4 92-93 0.008788244013604028 94-95 0.006522637593019739 96-97 0.004646657754319371 98-99 0.0011111572890763713 100-101 0.01655191442299478 102-103 0.008687229714597086 104-105 0.007980129621548485 106-107 0.018572200403133635 108-109 0.01189082605453156 110-111 0.019611204621490762 112-113 0.0030592901984959836 114-115 0.014776948883301355 116-117 0.0059165517989780815 118-119 0.004863116966477106 120-121 0.007705947952815355 122-123 0.008932550155042518 124-125 0.054735319447619175 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 3464856.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.290399371753715 #Duplication Level Percentage of deduplicated Percentage of total 1 68.91564268911081 35.34710836485573 2 14.548366138189628 14.923830188684887 3 6.329714026208931 9.739606809397417 4 3.372623156552472 6.919327545200036 5 1.970387797677788 5.0530988530062 6 1.2802758791084061 3.9399516687295932 7 0.8523562348059146 3.0602384183139746 8 0.5789257526173499 2.375466644666958 9 0.4398457710028489 2.030387873104174 >10 1.6561705675176124 13.41869274031336 >50 0.04037104833149441 1.3829642799330952 >100 0.014358169485691994 1.2179476469633128 >500 5.097014459536682E-4 0.18645619216657106 >1k 4.530679451398861E-4 0.4049227746647222 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 2.886122828769796E-5 0.0 0.0 0.0 5 0.0 2.886122828769796E-5 0.0 0.0 0.0 6 0.0 2.886122828769796E-5 0.0 0.0 0.0 7 0.0 2.886122828769796E-5 0.0 0.0 0.0 8 0.0 2.886122828769796E-5 0.0 0.0 0.0 9 0.0 2.886122828769796E-5 0.0 0.0 0.0 10-11 0.0 5.772245657539592E-5 0.0 0.0 0.0 12-13 0.0 7.21530707192449E-5 0.0 4.329184243154694E-5 0.0 14-15 0.0 1.8759798387003672E-4 0.0 7.21530707192449E-5 0.0 16-17 0.0 2.597510545892816E-4 0.0 1.443061414384898E-4 0.0 18-19 0.0 2.741816687331306E-4 0.0 2.164592121577347E-4 0.0 20-21 0.0 2.886122828769796E-4 0.0 2.886122828769796E-4 0.0 22-23 0.0 2.886122828769796E-4 0.0 4.906408808908653E-4 0.0 24-25 0.0 3.4633473945237553E-4 0.0 7.936837779116939E-4 0.0 26-27 0.0 3.7519596774007345E-4 0.0 0.001356477729521804 0.0 28-29 0.0 3.8962658188392246E-4 0.0 0.0031891657257906245 0.0 30-31 0.0 4.184878101716204E-4 0.0 0.009076856296481008 0.0 32-33 0.0 4.6177965260316736E-4 0.0 0.02363734596762463 0.0 34-35 0.0 5.195021091785632E-4 0.0 0.04158902996257276 0.0 36-37 0.0 5.916551798978082E-4 0.0 0.07108520527260007 0.0 38-39 0.0 6.926694789047511E-4 0.0 0.12051005871528282 0.0 40-41 0.0 7.503919354801469E-4 0.0 0.1753896843043405 0.0 42-43 0.0 8.081143920555428E-4 0.0 0.2277439524182246 0.0 44-45 0.0 8.081143920555428E-4 0.0 0.28963685648119286 0.0 46-47 0.0 8.081143920555428E-4 0.0 0.36330514168554195 0.0 48-49 0.0 8.225450061993918E-4 0.0 0.44075424779557937 0.0 50-51 0.0 8.658368486309388E-4 0.0 0.5212337828758251 0.0 52-53 0.0 8.946980769186367E-4 0.0 0.6061290858840886 0.0 54-55 0.0 8.946980769186367E-4 0.0 0.6984561551764344 0.0 56-57 0.0 8.946980769186367E-4 0.0 0.8085761717081461 0.0 58-59 0.0 8.946980769186367E-4 0.0 0.9273978485685985 0.0 60-61 0.0 8.946980769186367E-4 0.0 1.0488747584315192 0.0 62-63 0.0 8.946980769186367E-4 0.0 1.1764125262348566 0.0 64-65 0.0 8.946980769186367E-4 0.0 1.316548220185774 0.0 66-67 0.0 9.524205334940326E-4 0.0 1.4767424677966416 0.0 68-69 0.0 9.524205334940326E-4 0.0 1.6621325677026693 0.0 70-71 0.0 9.668511476378816E-4 0.0 1.8641900269448428 0.0 72-73 0.0 9.812817617817307E-4 0.0 2.065684692235406 0.0 74-75 0.0 9.812817617817307E-4 0.0 2.280022604113995 0.0 76-77 0.0 0.0010967266749325225 0.0 2.516800120986269 0.0 78-79 0.0 0.0011111572890763716 0.0 2.7840983867727838 2.886122828769796E-5 80-81 0.0 0.0011255879032202203 0.0 3.0689442793582185 2.886122828769796E-5 82-83 0.0 0.0011255879032202203 0.0 3.3683362310006535 2.886122828769796E-5 84-85 0.0 0.0011255879032202203 0.0 3.675665020422205 2.886122828769796E-5 86-87 0.0 0.0011255879032202203 0.0 4.0093008194279935 2.886122828769796E-5 88-89 0.0 0.0011255879032202203 0.0 4.386488211919918 5.772245657539592E-5 90-91 0.0 0.0011255879032202203 0.0 4.784354674479978 5.772245657539592E-5 92-93 0.0 0.0011688797456517672 0.0 5.1965074450424495 5.772245657539592E-5 94-95 0.0 0.0012121715880833142 0.0 5.626092397490689 5.772245657539592E-5 96-97 0.0 0.0012121715880833142 0.0 6.059559185143625 5.772245657539592E-5 98-99 0.0 0.0012121715880833142 0.0 6.542292089483661 5.772245657539592E-5 100-101 0.0 0.0012121715880833142 0.0 7.071650308122473 5.772245657539592E-5 102-103 0.0 0.0012121715880833142 0.0 7.616391561438628 5.772245657539592E-5 104-105 0.0 0.001342047115377955 0.0 8.15396079952529 5.772245657539592E-5 106-107 0.0 0.0014142001860972 0.0 8.7165238613091 5.772245657539592E-5 108-109 0.0 0.0014142001860972 0.0 9.307572955412866 5.772245657539592E-5 110-111 0.0 0.001443061414384898 0.0 9.938508267010231 5.772245657539592E-5 112-113 0.0 0.0015007838709602938 0.0 10.599617992782385 5.772245657539592E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 10415 0.0 27.82731 1 TCAACGC 10985 0.0 25.403824 4 CAACGCA 11185 0.0 25.001688 5 ATCAACG 11250 0.0 24.754316 3 AACGCAG 11365 0.0 24.553713 6 TATCAAC 11575 0.0 24.419485 2 GTACATG 14250 0.0 24.305784 1 TACATGG 13965 0.0 23.94745 2 CATGGGG 6980 0.0 23.44248 4 ACATGGG 14340 0.0 22.69843 3 ACGCAGA 12515 0.0 21.917137 7 CGCAGAG 12520 0.0 21.71829 8 GTATAGC 1995 0.0 20.582954 1 GTGTAGC 2790 0.0 19.41059 1 TACACCG 350 3.4118784E-8 18.69959 5 GCAGAGT 14270 0.0 18.34578 9 GACCGCG 390 5.9008016E-9 18.307556 7 TAGCCCT 3585 0.0 17.261179 4 GGTATCA 8065 0.0 17.193056 1 GAGTACT 4105 0.0 17.028967 12-13 >>END_MODULE