##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920944_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2242865 Sequences flagged as poor quality 0 Sequence length 125 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.105666636199683 31.0 31.0 34.0 28.0 34.0 2 31.21216658158204 33.0 31.0 34.0 28.0 34.0 3 31.282953722136643 33.0 31.0 34.0 27.0 34.0 4 34.829356202892285 37.0 35.0 37.0 32.0 37.0 5 34.5299596721158 37.0 35.0 37.0 31.0 37.0 6 34.25220956232319 37.0 35.0 37.0 30.0 37.0 7 34.15146921459829 37.0 35.0 37.0 30.0 37.0 8 34.14840170942076 37.0 35.0 37.0 30.0 37.0 9 35.68504435175546 39.0 35.0 39.0 30.0 39.0 10-11 35.653086788549466 39.0 35.0 39.0 30.0 39.0 12-13 35.548084481232706 39.0 35.0 39.0 30.0 39.0 14-15 36.75883167288268 40.0 37.0 41.0 30.0 41.0 16-17 36.76626390799268 40.0 37.0 41.0 30.0 41.0 18-19 36.80663236530063 40.0 37.0 41.0 30.0 41.0 20-21 36.80537170092717 40.0 37.0 41.0 30.0 41.0 22-23 36.74869530711835 40.0 37.0 41.0 30.0 41.0 24-25 36.72254705477147 40.0 37.0 41.0 30.0 41.0 26-27 36.58604998517521 40.0 36.5 41.0 30.0 41.0 28-29 36.47673243819847 40.0 36.0 41.0 29.5 41.0 30-31 36.313069890519486 40.0 36.0 41.0 29.0 41.0 32-33 36.137674581394776 40.0 35.5 41.0 28.5 41.0 34-35 35.99993601933242 40.0 35.0 41.0 27.5 41.0 36-37 35.85166895912148 40.0 35.0 41.0 27.0 41.0 38-39 35.71493157189577 40.0 35.0 41.0 27.0 41.0 40-41 35.55445891750061 40.0 35.0 41.0 26.0 41.0 42-43 35.38892086683773 40.0 35.0 41.0 25.5 41.0 44-45 35.168283200281785 39.0 35.0 41.0 24.5 41.0 46-47 34.911788493734576 39.0 35.0 41.0 23.5 41.0 48-49 34.61277361767204 39.0 34.0 41.0 22.5 41.0 50-51 34.39839758523139 39.0 34.0 41.0 21.5 41.0 52-53 34.183054486114855 39.0 34.0 41.0 20.0 41.0 54-55 33.9516219210697 38.0 34.0 41.0 19.0 41.0 56-57 33.684168017245796 38.0 33.0 40.0 18.0 41.0 58-59 33.43316048892822 37.5 33.0 40.0 17.0 41.0 60-61 33.14369522909315 37.0 33.0 40.0 13.5 41.0 62-63 32.837420219228534 36.5 32.5 40.0 13.0 41.0 64-65 32.510722446513725 36.0 32.0 39.0 9.5 41.0 66-67 32.17395786193106 35.5 32.0 39.0 8.0 41.0 68-69 31.79949105273835 35.0 32.0 38.5 7.0 40.5 70-71 31.459188805389537 35.0 31.0 37.5 4.0 40.0 72-73 31.10227075637633 35.0 31.0 37.0 2.0 39.5 74-75 30.785778680393157 35.0 31.0 36.5 2.0 39.0 76-77 30.5851839054067 35.0 31.0 36.0 2.0 39.0 78-79 30.447019325728476 35.0 31.0 36.0 2.0 37.5 80-81 30.217536276146802 35.0 31.0 35.0 2.0 37.0 82-83 30.017826975765374 35.0 31.0 35.0 2.0 37.0 84-85 29.794464669072816 35.0 31.0 35.0 2.0 36.0 86-87 29.64577538104166 35.0 31.0 35.0 2.0 36.0 88-89 29.511140215750835 35.0 30.5 35.0 2.0 36.0 90-91 29.368951987747813 35.0 30.0 35.0 2.0 35.0 92-93 29.252187715265965 34.5 30.0 35.0 2.0 35.0 94-95 29.16949682660347 34.0 30.0 35.0 2.0 35.0 96-97 29.10795433519182 34.0 30.0 35.0 2.0 35.0 98-99 29.008424715709594 34.0 30.0 35.0 2.0 35.0 100-101 28.906409213216133 34.0 30.0 35.0 2.0 35.0 102-103 27.509059617944015 32.5 26.5 34.0 2.0 35.0 104-105 28.570727618470126 34.0 29.0 35.0 2.0 35.0 106-107 28.75072975859002 34.0 29.0 35.0 2.0 35.0 108-109 28.84478981124588 34.5 29.5 35.0 2.0 35.0 110-111 29.017190067168556 35.0 31.0 35.0 2.0 35.0 112-113 28.986615779371476 35.0 31.0 35.0 2.0 35.0 114-115 28.899021118078885 35.0 31.0 35.0 2.0 35.0 116-117 28.78524900072006 35.0 30.0 35.0 2.0 35.0 118-119 28.684015979561856 35.0 30.0 35.0 2.0 35.0 120-121 28.500284011743908 35.0 30.0 35.0 2.0 35.0 122-123 28.30495437754836 35.0 30.0 35.0 2.0 35.0 124-125 27.584340564412035 34.5 27.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 43457.0 3 17386.0 4 7532.0 5 6302.0 6 7578.0 7 8844.0 8 9734.0 9 10611.0 10 12160.0 11 13874.0 12 15042.0 13 17381.0 14 21059.0 15 19428.0 16 11981.0 17 10354.0 18 9840.0 19 9106.0 20 9038.0 21 9593.0 22 10007.0 23 11110.0 24 14537.0 25 19694.0 26 24424.0 27 28796.0 28 34422.0 29 40904.0 30 48864.0 31 59369.0 32 73975.0 33 94493.0 34 127212.0 35 192403.0 36 368284.0 37 613233.0 38 210338.0 39 500.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.15895461331301 18.074780144480634 12.302123329998432 25.46414191220793 2 16.79118237080576 20.46311369967035 36.982033621246636 25.763670308277252 3 19.348980672821924 23.899035692056366 29.54443717195785 27.20754646316386 4 13.480276973974611 15.90125779713841 35.076042999629934 35.54242222925705 5 13.890610588205371 37.293435127039096 33.963185234468675 14.852769050286858 6 33.65252113754875 35.45241915804904 16.157906734706533 14.737152969695671 7 28.678680151882613 32.13006710200164 20.588487141087246 18.6027656050285 8 27.25479283945861 34.01167975912727 19.509951340282683 19.223576061131446 9 27.036169485071 14.432745127154828 18.97634912629689 39.55473626147729 10-11 25.90782960534266 25.186867734252967 27.136789009684612 21.768513650719758 12-13 26.36670709629088 22.760102203711796 27.47685701290478 23.396333687092547 14-15 23.80909060098002 23.96599809846932 25.079914234901473 27.144997065649186 16-17 23.30258888419145 26.854701037658607 25.977810838243347 23.8648992399066 18-19 23.339665171449067 25.509822970903794 28.265476973819904 22.885034883827235 20-21 24.22112038442535 24.682499478264592 28.02466069361378 23.071719443696274 22-23 23.85612892825777 24.63261123110103 27.892204832044953 23.61905500859624 24-25 23.521349997536355 24.894503573177968 28.0094211592155 23.574725270070186 26-27 23.29641958160451 24.982799098374 28.130909674643217 23.589871645378274 28-29 23.473968424549568 24.93684686954447 28.236349893983004 23.352834811922953 30-31 23.639056064402293 24.9942367365794 27.875288776284158 23.491418422734146 32-33 23.339067835684656 25.152013363263332 27.81427614616471 23.694642654887303 34-35 23.534971454944966 25.086114539193293 28.04075348688912 23.33816051897262 36-37 23.877157956652013 24.815548302598444 27.740152876955946 23.567140863793597 38-39 23.702891244212093 25.062823566452057 27.671311559848395 23.562973629487452 40-41 23.633025027203484 25.00626572004495 27.81863750691236 23.542071745839205 42-43 23.711486864188622 24.897091309068117 27.715521825829057 23.6759000009142 44-45 23.617332013342608 25.060625925331337 27.555564474411803 23.766477586914252 46-47 23.828152610235808 25.138538234055307 27.179693114371613 23.853616041337272 48-49 23.74888098346364 25.402115735574306 26.873988983191623 23.97501429777044 50-51 23.613733989787534 25.598792982819134 26.816824396123522 23.97064863126981 52-53 23.779838784835235 25.461998677423857 26.64808103833375 24.11008149940716 54-55 23.54414337359982 25.622603933061523 26.559915664686862 24.2733370286518 56-57 23.536339765750146 25.667858251367292 26.476102305038545 24.319699677844017 58-59 23.359803076703543 25.395970341104057 26.78324056102627 24.460986021166136 60-61 23.47756985548402 25.507335500307477 26.79139923235781 24.22369541185069 62-63 23.255810842058953 25.463191626616567 26.913870183479382 24.3671273478451 64-65 23.1686643535907 25.48916517667918 26.85935164752593 24.48281882220419 66-67 23.124135415263783 25.647853243346656 26.84076835327768 24.387242988111876 68-69 23.37425736746325 25.338512902174287 26.772496587558063 24.514733142804396 70-71 23.133955476378667 25.21730599649724 26.927705134965503 24.72103339215859 72-73 23.247818804217722 25.298994625276716 26.76863716069049 24.68454940981507 74-75 23.15690925200809 25.457347458318676 26.686550272435277 24.69919301723796 76-77 23.118988116193357 25.284208277975083 26.820913947916015 24.77588965791555 78-79 23.11516355264173 25.43510804289341 26.658324745405665 24.791403659059196 80-81 23.0886888677764 25.4171320171301 26.649157820641427 24.84502129445207 82-83 22.910117803180377 25.317260595029023 26.761100358446114 25.011521243344486 84-85 22.864336957840138 25.395471685324317 26.512946196051573 25.22724516078398 86-87 22.88174744492412 25.269309167414715 26.595286415098883 25.253656972562283 88-89 22.713470069942453 25.249940189160558 26.59971420117802 25.43687553971897 90-91 22.6796115639001 25.302012300550814 26.592845525192494 25.42553061035659 92-93 22.630630317283437 25.271819952920065 26.566763386098714 25.530786343697788 94-95 22.482642159714203 25.18310985878061 26.73202161176808 25.602226369737103 96-97 22.684352588162422 24.95956588453167 26.702212717114588 25.653868810191316 98-99 22.587728734821336 25.139967104859778 26.443353984394317 25.828950175924565 100-101 22.45419841456179 25.153586121384375 26.632802245201333 25.7594132188525 102-103 22.30175289315114 24.946667995646475 26.62437121527845 26.12720789592393 104-105 22.152249661067696 25.136147004654426 26.53947499547979 26.17212833879809 106-107 22.09479593934251 25.130635473188235 26.586007613175422 26.18856097429383 108-109 22.0459407485856 25.226208857055266 26.623271369248346 26.10457902511078 110-111 22.015608717230457 25.353463602178373 26.498321362815275 26.132606317775895 112-113 21.92182745213624 25.49506909597455 26.405602500444232 26.177500951444983 114-115 21.843944498359907 25.53945374532624 26.353870777232085 26.262730979081766 116-117 21.61068319381124 25.485927032359466 26.587419602947243 26.315970170882053 118-119 21.717796608280217 25.480768587690022 26.406770063513935 26.39466474051583 120-121 21.610955056179776 25.696651507044766 26.401752273943284 26.290641162832173 122-123 21.509158534812777 25.741876543253913 26.281419066837998 26.467545855095313 124-125 21.358044369738156 25.792632835568018 26.335311093103332 26.514011701590494 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 117.0 1 117.0 2 307.5 3 621.0 4 468.0 5 242.5 6 510.0 7 1132.0 8 1876.5 9 2066.0 10 1531.0 11 1083.0 12 1065.5 13 1173.5 14 1301.0 15 1437.5 16 1606.0 17 1787.5 18 1960.5 19 2178.0 20 2487.5 21 2872.5 22 3364.0 23 4004.5 24 4781.5 25 5637.0 26 6945.0 27 8835.5 28 10538.0 29 12515.0 30 14928.5 31 17997.0 32 21816.0 33 24141.5 34 26079.0 35 29192.5 36 33803.0 37 38549.5 38 42582.0 39 46720.0 40 51284.5 41 56363.0 42 60226.0 43 65081.0 44 71318.0 45 77679.0 46 84137.0 47 88155.0 48 90698.5 49 93967.5 50 99216.0 51 101369.0 52 97986.5 53 96790.5 54 95912.5 55 92475.0 56 87102.5 57 79584.0 58 73575.5 59 66296.5 60 55715.5 61 45305.0 62 35847.0 63 26752.0 64 19164.0 65 13909.5 66 10096.5 67 7472.5 68 5256.5 69 3591.0 70 2742.5 71 2040.5 72 1520.0 73 1194.0 74 879.5 75 623.0 76 432.0 77 271.5 78 158.5 79 94.5 80 59.5 81 41.0 82 34.5 83 23.0 84 12.0 85 6.0 86 7.5 87 7.5 88 7.0 89 7.0 90 4.5 91 5.5 92 6.0 93 4.0 94 9.0 95 15.5 96 11.0 97 4.0 98 3.0 99 2.0 100 0.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.21927311719608625 2 0.007847106268099062 3 5.796158038936806E-4 4 0.0024522207087809564 5 0.08301881745000257 6 0.05519725886310589 7 0.027063599458728015 8 0.015738798367266868 9 0.012662376023523485 10-11 0.010522256132223741 12-13 0.01270696185459223 14-15 0.02055406812269129 16-17 0.022694188013991035 18-19 0.02200310763242549 20-21 0.015560455042991887 22-23 0.014066829702188942 24-25 0.011302508175926772 26-27 0.011146457767186166 28-29 0.013375749320623399 30-31 0.009452196186573869 32-33 0.013331163489554654 34-35 0.015939434607076218 36-37 0.018191019076047824 38-39 0.02113368392658497 40-41 0.022515844689716055 42-43 0.020710118531431898 44-45 0.018948978204216482 46-47 0.01932795776830081 48-49 0.017054080383794832 50-51 0.013910779293448333 52-53 0.012127346050698548 54-55 0.01729930245467293 56-57 0.021089098095516227 58-59 0.016385292917763663 60-61 0.01845853406246029 62-63 0.02539163079365009 64-65 0.01767828201875726 66-67 0.0204648964605538 68-69 0.014980839239098206 70-71 0.015493576296388771 72-73 0.023050874662540993 74-75 0.013999950955585826 76-77 0.012283396459439154 78-79 0.016764272481847996 80-81 0.016920322890588597 82-83 0.011971295641957942 84-85 0.015738798367266868 86-87 0.016407585833298037 88-89 0.016875737059519856 90-91 0.01259549727692037 92-93 0.013197405996348421 94-95 0.012952183925470326 96-97 0.014624152590548249 98-99 0.012684668939057857 100-101 0.017544524525551025 102-103 0.024232399185862726 104-105 0.007156025886533518 106-107 0.007757934605961572 108-109 0.01348721389829526 110-111 0.012127346050698548 112-113 0.009964933243864433 114-115 0.00697768256225854 116-117 0.00401272479618702 118-119 0.002229291553437233 120-121 0.0028980790194684035 122-123 0.0017388474116810416 124-125 3.3439373301558497E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 2242865.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.01660667665551 #Duplication Level Percentage of deduplicated Percentage of total 1 67.66586459104147 29.784217471397035 2 14.236311543885819 12.53268251507105 3 6.386114590672319 8.432852823890231 4 3.4421631367782806 6.0604936363380935 5 2.103172552449285 4.628725950714891 6 1.3713701430564698 3.621783611701526 7 0.9438425237494198 2.908132159280607 8 0.6734311233601129 2.3713722304608296 9 0.5128368653824594 2.0316004733545783 >10 2.502251032032007 19.277407407077767 >50 0.12271565844656511 3.6488979129358654 >100 0.036677797549012486 2.819252599989279 >500 0.0021317897978951703 0.6006279453880948 >1k 9.136241990978578E-4 0.7108607337582648 >5k 2.0302759979952395E-4 0.5710925286419248 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7176 0.3199479237493117 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5605 0.24990358314031383 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3915 0.17455352863413534 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 2255 0.10054104906001922 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.229291553437233E-4 2 0.0 0.0 0.0 0.0 2.229291553437233E-4 3 0.0 0.0 0.0 0.0 2.229291553437233E-4 4 0.0 0.0 0.0 0.0 2.229291553437233E-4 5 0.0 0.0 0.0 0.0 2.67514986412468E-4 6 0.0 0.0 0.0 0.0 2.67514986412468E-4 7 0.0 0.0 0.0 0.0 2.67514986412468E-4 8 0.0 0.0 0.0 0.0 2.67514986412468E-4 9 0.0 0.0 0.0 0.0 2.67514986412468E-4 10-11 0.0 0.0 0.0 2.2292915534372333E-5 2.67514986412468E-4 12-13 0.0 0.0 0.0 4.4585831068744666E-5 6.464945504967976E-4 14-15 0.0 0.0 0.0 4.4585831068744666E-5 7.802520437030316E-4 16-17 0.0 0.0 0.0 4.4585831068744666E-5 8.917166213748932E-4 18-19 0.0 0.0 0.0 6.6878746603117E-5 0.001003181199046755 20-21 0.0 0.0 0.0 1.1146457767186166E-4 0.0010254741145811273 22-23 0.0 0.0 0.0 2.452220708780957E-4 0.001070059945649872 24-25 0.0 0.0 0.0 6.910803815655423E-4 0.001070059945649872 26-27 0.0 0.0 0.0 0.0013821607631310847 0.0011146457767186166 28-29 0.0 0.0 0.0 0.004503168937943211 0.001136938692252989 30-31 0.0 0.0 0.0 0.01558274795852626 0.0011592316077873612 32-33 0.0 0.0 0.0 0.04249029700851366 0.0011592316077873612 34-35 0.0 0.0 0.0 0.08816848093844257 0.001203817438856106 36-37 0.0 0.0 0.0 0.1646331812213397 0.001203817438856106 38-39 0.0 0.0 0.0 0.2844353093030566 0.001203817438856106 40-41 0.0 0.0 0.0 0.4193520341170779 0.001203817438856106 42-43 0.0 0.0 0.0 0.5492751458513998 0.001203817438856106 44-45 0.0 0.0 0.0 0.7079115327939933 0.001203817438856106 46-47 0.0 0.0 0.0 0.900500030095436 0.0012261103543904782 48-49 0.0 0.0 0.0 1.1050152372077677 0.001270696185459223 50-51 0.0 0.0 0.0 1.326985797183513 0.0012929891009935952 52-53 0.0 0.0 0.0 1.5380774143784848 0.0012929891009935952 54-55 0.0 0.0 0.0 1.7808918503788682 0.0012929891009935952 56-57 0.0 0.0 0.0 2.0760946378850265 0.0013152820165279674 58-59 0.0 0.0 0.0 2.3999661147683877 0.0013375749320623399 60-61 0.0 0.0 0.0 2.7471336883851682 0.0013375749320623399 62-63 0.0 0.0 0.0 3.091670697968892 0.0014267465941998293 64-65 0.0 0.0 0.0 3.4597267334413795 0.0014267465941998293 66-67 0.0 0.0 0.0 3.9029544800957705 0.0014267465941998293 68-69 0.0 0.0 0.0 4.3908572294810435 0.0014267465941998293 70-71 0.0 0.0 0.0 4.926511403940941 0.0014490395097342015 72-73 0.0 0.0 0.0 5.457907631533775 0.0015159182563373186 74-75 0.0 0.0 0.0 5.995991733786919 0.0015605040874060632 76-77 0.0 0.0 0.0 6.5929960117974105 0.0015605040874060632 78-79 0.0 0.0 0.0 7.264547799354843 0.0015605040874060632 80-81 0.0 0.0 0.0 7.982847830787854 0.0015605040874060632 82-83 0.0 0.0 0.0 8.730975783205857 0.0016942615806122972 84-85 0.0 0.0 0.0 9.456788527173948 0.0016942615806122972 86-87 0.0 0.0 0.0 10.219763561337842 0.0017388474116810419 88-89 0.0 0.0 0.0 11.061856152733224 0.0017834332427497865 90-91 0.0 0.0 0.0 11.961130072474269 0.0017834332427497865 92-93 0.0 0.0 0.0 12.871483571235897 0.0019617765670247654 94-95 0.0 0.0 0.0 13.783821139480086 0.00200636239809351 96-97 0.0 0.0 0.0 14.704585429796264 0.0022069986379028607 98-99 0.0 0.0 0.0 15.703999126117711 0.0023184632155747223 100-101 0.0 0.0 0.0 16.78068006768129 0.0023184632155747223 102-103 0.0 0.0 0.0 17.870580708156755 0.0023407561311090948 104-105 0.0 0.0 0.0 18.936204363615285 0.002363049046643467 106-107 0.0 0.0 0.0 20.001359867847597 0.002363049046643467 108-109 0.0 0.0 0.0 21.10008850287467 0.002363049046643467 110-111 0.0 0.0 0.0 22.263622643360165 0.002407634877712212 112-113 0.0 0.0 0.0 23.462513347883178 0.0024522207087809564 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 9730 0.0 38.758373 1 GGTATCA 6880 0.0 37.380928 1 TATCGTG 90 2.3814244E-4 33.084553 5 TCAACGC 12185 0.0 30.69247 4 CAACGCA 12300 0.0 30.405508 5 TATCAAC 12550 0.0 29.942177 2 AACGCAG 12635 0.0 29.771269 6 ATCAACG 12730 0.0 29.47202 3 CATGGGG 6545 0.0 27.842585 4 GTATCGC 155 6.8182E-6 26.87954 6 GTACATG 11515 0.0 26.220917 1 ACGCAGA 14230 0.0 26.17691 7 CCGTACG 115 0.0010053337 25.868586 9 CGCAGAG 14695 0.0 25.22204 8 TACATGG 11795 0.0 24.840761 2 GAGTACT 8150 0.0 24.822252 12-13 ACATGGG 11995 0.0 24.178339 3 AGTACTT 8470 0.0 24.13033 12-13 GTACTTT 8810 0.0 23.030235 14-15 GCAGAGT 15740 0.0 23.02041 9 >>END_MODULE