##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920938_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4617153 Sequences flagged as poor quality 0 Sequence length 125 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.29172240989198 31.0 30.0 34.0 23.0 34.0 2 29.465995820368093 31.0 30.0 34.0 23.0 34.0 3 29.561190413226505 31.0 30.0 34.0 23.0 34.0 4 32.957944646841895 37.0 35.0 37.0 26.0 37.0 5 32.99155908413691 37.0 35.0 37.0 26.0 37.0 6 33.011760927134105 37.0 35.0 37.0 26.0 37.0 7 32.913476118291946 37.0 35.0 37.0 25.0 37.0 8 32.86360361027672 37.0 35.0 37.0 25.0 37.0 9 34.22585822908619 39.0 35.0 39.0 25.0 39.0 10-11 34.21603215228085 39.0 35.0 39.0 25.0 39.0 12-13 34.14652481734957 39.0 35.0 39.0 24.0 39.0 14-15 35.25365923546393 40.0 36.0 41.0 24.5 41.0 16-17 35.23403025630729 40.0 35.5 41.0 24.0 41.0 18-19 35.213700953812875 40.0 35.0 41.0 24.0 41.0 20-21 35.24213449283573 40.0 35.0 41.0 24.0 41.0 22-23 35.16021149829776 40.0 35.0 41.0 24.0 41.0 24-25 35.16446953349824 40.0 35.0 41.0 24.0 41.0 26-27 35.10171581925052 40.0 35.0 41.0 24.0 41.0 28-29 35.00101599405521 40.0 35.0 41.0 24.0 41.0 30-31 34.854317368300336 39.0 34.0 41.0 23.0 41.0 32-33 34.7220528537824 39.0 34.0 41.0 22.5 41.0 34-35 34.652462892176196 39.0 34.0 41.0 22.0 41.0 36-37 34.511245241385765 39.0 34.0 41.0 20.5 41.0 38-39 34.37097200374343 39.0 34.0 41.0 19.0 41.0 40-41 34.23928695886838 39.0 33.5 41.0 18.0 41.0 42-43 34.04561079089214 39.0 33.0 41.0 16.0 41.0 44-45 33.88492616553967 39.0 33.0 41.0 15.0 41.0 46-47 33.685416749239195 38.0 33.0 40.5 13.5 41.0 48-49 33.56062274739433 38.0 33.0 40.0 10.5 41.0 50-51 33.36702920609302 38.0 33.0 40.0 9.0 41.0 52-53 33.17584375046701 38.0 32.5 40.0 8.0 41.0 54-55 32.94232593115281 38.0 32.0 40.0 7.0 41.0 56-57 32.68127339509867 38.0 32.0 40.0 4.0 41.0 58-59 32.42433042613057 37.0 31.0 40.0 2.0 41.0 60-61 32.16244761652906 37.0 31.0 40.0 2.0 41.0 62-63 31.857760290811242 36.0 31.0 40.0 2.0 41.0 64-65 31.578411848167043 36.0 31.0 39.0 2.0 41.0 66-67 31.23779101537246 35.0 30.0 39.0 2.0 40.5 68-69 30.917138656657038 35.0 30.0 39.0 2.0 40.0 70-71 30.579081308330046 35.0 30.0 38.0 2.0 40.0 72-73 30.638487505179057 35.0 30.0 37.5 2.0 40.0 74-75 30.640930135951745 35.0 31.0 37.0 2.0 39.5 76-77 30.378283543993454 35.0 30.0 37.0 2.0 39.0 78-79 30.08840750999588 35.0 30.0 36.0 2.0 39.0 80-81 29.818051188687054 35.0 30.0 36.0 2.0 37.5 82-83 29.57526434579924 35.0 30.0 35.5 2.0 37.0 84-85 29.341851352987433 35.0 30.0 35.0 2.0 37.0 86-87 29.14384676011386 35.0 30.0 35.0 2.0 36.0 88-89 28.951695341263328 34.0 29.5 35.0 2.0 36.0 90-91 28.784384771308208 34.0 29.0 35.0 2.0 36.0 92-93 28.629842675778775 34.0 29.0 35.0 2.0 35.5 94-95 28.527356035201777 34.0 29.0 35.0 2.0 35.0 96-97 28.44349916496161 34.0 29.0 35.0 2.0 35.0 98-99 28.324532780265244 34.0 29.0 35.0 2.0 35.0 100-101 28.219124425809582 34.0 29.0 35.0 2.0 35.0 102-103 26.892367439415587 32.5 26.0 34.5 2.0 35.0 104-105 27.915267698514647 34.0 28.5 35.0 2.0 35.0 106-107 28.086529946051172 34.0 29.0 35.0 2.0 35.0 108-109 28.040609332201036 34.0 29.0 35.0 2.0 35.0 110-111 27.961091824334176 34.0 29.0 35.0 2.0 35.0 112-113 27.86631177264431 34.0 29.0 35.0 2.0 35.0 114-115 27.781377290291225 34.0 29.0 35.0 2.0 35.0 116-117 27.596414392158977 34.0 28.0 35.0 2.0 35.0 118-119 27.430498512828144 34.0 27.0 35.0 2.0 35.0 120-121 27.288897508919455 34.0 27.0 35.0 2.0 35.0 122-123 27.03938455147577 34.0 27.0 35.0 2.0 35.0 124-125 25.84494795818982 33.0 22.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 214790.0 3 30611.0 4 19227.0 5 17206.0 6 20616.0 7 22226.0 8 22679.0 9 24552.0 10 26653.0 11 28417.0 12 29448.0 13 28664.0 14 28959.0 15 25668.0 16 21287.0 17 19293.0 18 18350.0 19 18031.0 20 18338.0 21 19568.0 22 23231.0 23 30192.0 24 41293.0 25 53657.0 26 60064.0 27 65709.0 28 77033.0 29 89972.0 30 107063.0 31 129089.0 32 160705.0 33 204519.0 34 274236.0 35 399956.0 36 703543.0 37 1123091.0 38 418449.0 39 768.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.955071799128184 18.600805351190303 12.313972422296974 25.130150427384546 2 15.738616214973492 20.37947215284729 39.32976403364844 24.552147598530784 3 19.004605971513744 24.773752882935515 29.229316029175713 26.99232511637503 4 12.545044786148013 16.48658150658177 36.90851844485716 34.05985526241306 5 13.434862093150443 38.07868670515015 34.64109769248809 13.845353509211325 6 32.4007984731272 36.742273870558805 17.357706117746382 13.49922153856761 7 27.624006690037856 32.64285765392063 21.699650342751696 18.033485313289816 8 25.428839502618583 36.3357987928368 20.037166162489665 18.19819554205495 9 25.802312129705427 16.402835398426554 19.46791185081378 38.32694062105424 10-11 24.65603778067577 26.730346192798333 28.09083680745833 20.52277921906757 12-13 25.12184694313809 24.227094329848587 27.905201436381283 22.745857290632042 14-15 22.475655566279695 25.667487341458006 25.170433252566333 26.686423839695966 16-17 22.687503765962806 28.331527838647297 26.064504928155184 22.916463467234717 18-19 22.757948346934135 27.570705495510122 27.354778176266482 22.31656798128926 20-21 23.608351597146783 26.871542856523632 27.041858222237874 22.478247324091708 22-23 23.19706747124114 26.679282839386513 26.794692105609606 23.328957583762737 24-25 22.93758147306553 26.750981469381298 27.10991265112136 23.20152440643181 26-27 22.832976504802772 26.928391254572702 27.043014924376774 23.19561731624776 28-29 22.83758082261758 27.169739227416674 26.98604985934776 23.006630090617993 30-31 23.128963106168253 26.971308891173862 26.872190940161993 23.027537062495888 32-33 22.80621541008418 27.034766749812327 26.85107830535435 23.30793953474914 34-35 23.035995829567092 27.091634545497694 26.942455199869002 22.929914425066205 36-37 23.18444526709298 26.83895181090566 26.887273983576314 23.089328938425048 38-39 22.99238338349598 27.041914472741713 26.866664889463372 23.099037254298935 40-41 23.14243678655192 26.919746593514677 26.92459078502562 23.013225834907786 42-43 23.03009022950763 26.99992847528821 26.852836821788596 23.117144473415564 44-45 22.998463730571913 27.042925710639746 26.849637724544085 23.108972834244256 46-47 23.010653136342636 27.08920105378408 26.72467637056513 23.17546943930816 48-49 22.871062099286217 27.1154263726824 26.7388263888919 23.274685139139486 50-51 22.85729765458653 27.23636718263235 26.72789627952084 23.178438883260284 52-53 23.094433311599815 27.113570221821675 26.61093971478848 23.181056751790035 54-55 22.961637412857865 27.048310233050156 26.625621971684097 23.364430382407882 56-57 22.88532661812532 27.218157242802864 26.52685969422006 23.369656444851756 58-59 22.952374977503272 26.984926730276204 26.670118783818907 23.392579508401614 60-61 22.96154307533813 26.983337648020967 26.819133893191598 23.235985383449307 62-63 22.859847466942213 26.987248891716785 26.864371186890274 23.28853245445073 64-65 22.832970320652414 26.873907142576975 26.763605607652025 23.52951692911859 66-67 22.897771058697273 27.097840493690605 26.550465630545155 23.453922817066967 68-69 23.115224275481356 26.857772337609088 26.635016067665372 23.39198731924418 70-71 22.906546829738392 26.72473443994822 26.74149684483214 23.627221885481244 72-73 23.007313388752042 26.76018980268868 26.775716316187857 23.456780492371422 74-75 22.951122703364295 26.851004295952652 26.712941774065484 23.48493122661757 76-77 22.968296554631983 26.68607651916067 26.838228003566854 23.50739892264049 78-79 23.056035450486256 26.738186421915916 26.765860443183087 23.439917684414738 80-81 23.035772738812422 26.684549406214813 26.71125866032666 23.5684191946461 82-83 23.065529579695145 26.672984699430934 26.79126902195791 23.470216698916012 84-85 23.087483164936646 26.736134024712772 26.632606986157132 23.543775824193446 86-87 23.015855558829053 26.601649170555042 26.78667457362404 23.595820696991865 88-89 23.105869921697828 26.51130909800915 26.74451664828643 23.63830433200659 90-91 23.03723144373848 26.60466825783828 26.762813827394755 23.59528647102848 92-93 23.145040401112755 26.535981775481954 26.764232487207895 23.554745336197392 94-95 23.01910410737821 26.419219770323345 26.87871828899461 23.682957833303842 96-97 23.090282085266445 26.32440807837545 26.864738252821564 23.720571583536547 98-99 23.03968810399163 26.48488695730748 26.715543433874593 23.7598815048263 100-101 22.961499612295135 26.430962477731484 26.880271082460926 23.72726682751245 102-103 22.820291112132157 26.507387876889627 26.904313660316166 23.768007350662053 104-105 22.7953464159635 26.62115715569529 26.74839022112487 23.835106207216338 106-107 22.688204093710386 26.678342488386754 26.7235678780115 23.909885539891363 108-109 22.752979428098897 26.62649599839121 26.73816225043579 23.882362323074112 110-111 22.72547596086123 26.829174206551304 26.657644088549848 23.78770574403762 112-113 22.770052023821016 26.890055616976554 26.607988572985214 23.731903786217217 114-115 22.69168674671379 26.961566047543467 26.567774263175053 23.778972942567687 116-117 22.720623620867016 26.934492219530824 26.561352189940994 23.78353196966116 118-119 22.846822981076723 26.823421004241833 26.474036203867612 23.85571981081383 120-121 22.764072064957546 26.910745790782077 26.569017390797423 23.756164753462958 122-123 22.863514192203024 26.90086018441114 26.489963251049563 23.74566237233627 124-125 22.972509626333956 26.89922594868643 26.350829427387556 23.77743499759206 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2309.0 1 1709.0 2 884.5 3 608.0 4 512.0 5 438.5 6 422.5 7 460.5 8 550.0 9 643.5 10 684.0 11 739.0 12 824.5 13 942.0 14 1109.0 15 1271.0 16 1509.5 17 1774.5 18 2046.0 19 2503.5 20 3183.5 21 4234.0 22 5728.0 23 7663.5 24 10449.0 25 14173.0 26 19589.0 27 26648.0 28 32863.0 29 39602.0 30 47710.0 31 56645.0 32 67007.0 33 76278.5 34 83790.0 35 90726.5 36 98590.0 37 106874.0 38 114663.5 39 121372.0 40 129559.0 41 138351.0 42 145077.5 43 152967.0 44 160075.5 45 166415.0 46 172417.0 47 176300.0 48 181895.5 49 186421.5 50 187925.0 51 186712.5 52 180557.0 53 175119.5 54 168466.0 55 156628.5 56 142086.5 57 127995.0 58 116498.5 59 103697.5 60 89131.0 61 74660.0 62 60509.0 63 46287.5 64 33837.0 65 25282.5 66 19026.5 67 14538.0 68 11276.0 69 8675.0 70 6929.5 71 5405.5 72 4136.5 73 3534.5 74 2827.0 75 2177.5 76 1581.5 77 1007.5 78 671.0 79 476.0 80 341.5 81 242.0 82 194.0 83 146.0 84 105.5 85 79.5 86 54.0 87 42.0 88 34.0 89 26.5 90 22.0 91 19.5 92 17.0 93 17.0 94 17.0 95 12.5 96 13.0 97 14.0 98 11.5 99 9.5 100 15.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.16215620318408336 2 0.1416024117026228 3 0.1668127523605997 4 0.13999969245117067 5 0.16365063059422114 6 0.10504308607490373 7 0.10660248858983014 8 0.0943221937847847 9 0.09982341932355285 10-11 0.08665513141972986 12-13 0.07527365889759338 14-15 0.07515453787214763 16-17 0.07491629582125608 18-19 0.07216568305187201 20-21 0.06639372790981801 22-23 0.05859671533518599 24-25 0.06276595122578783 26-27 0.07275045899496942 28-29 0.06743332958643562 30-31 0.06396799066437694 32-33 0.07282626328388944 34-35 0.0702489174606083 36-37 0.07210070794708341 38-39 0.06848376044718466 40-41 0.07320528472848961 42-43 0.07283709246802088 44-45 0.06613382749066363 46-47 0.06335072716888525 48-49 0.055770298276881874 50-51 0.06124986544738716 52-53 0.06342653145780527 54-55 0.06488847131554878 56-57 0.06819137247563596 58-59 0.05617097808974491 60-61 0.06645870301460662 62-63 0.0608383564503927 64-65 0.05479567170505287 66-67 0.059885388246826564 68-69 0.06317746022278231 70-71 0.057611259579225554 72-73 0.053409536136229396 74-75 0.05581361501340762 76-77 0.06500759234099454 78-79 0.05884578657020896 80-81 0.057340529975939726 82-83 0.06167220362851307 84-85 0.06279843877818214 86-87 0.05742716344899119 88-89 0.056181807273876345 90-91 0.059203149646546264 92-93 0.05394016615866964 94-95 0.062451904885976274 96-97 0.04958683413783342 98-99 0.04941356719173049 100-101 0.04707446341934088 102-103 0.04458375106911121 104-105 0.04332756570986493 106-107 0.05389684942214391 108-109 0.05434084597153268 110-111 0.0607084062408155 112-113 0.06117406115846713 114-115 0.06307999756559941 116-117 0.06643704464634376 118-119 0.05970129211659219 120-121 0.06098996502823277 122-123 0.05924646638307199 124-125 0.07032472174952833 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 4617153.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.466027324456284 #Duplication Level Percentage of deduplicated Percentage of total 1 70.985195275115 35.11355609110704 2 13.577298732226279 13.432300601612216 3 5.799808082643027 8.606803952778671 4 3.0648303388253595 6.064199251406314 5 1.7607329981166346 4.354823329795464 6 1.1206246598298326 3.3259710026161216 7 0.7425279918022683 2.571093695216526 8 0.5572087475566522 2.2050322505650737 9 0.41147658521412556 1.831870080681831 >10 1.8571218772272629 15.738127574773117 >50 0.08648034527944498 2.947632642880408 >100 0.03485080628577554 2.9468537687026157 >500 0.0012729344808372605 0.4205978706118019 >1k 5.706253976655793E-4 0.4411378872526908 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 2.165836826286675E-5 0.0 5 0.0 0.0 0.0 2.165836826286675E-5 2.165836826286675E-5 6 0.0 0.0 0.0 2.165836826286675E-5 2.165836826286675E-5 7 0.0 0.0 0.0 2.165836826286675E-5 2.165836826286675E-5 8 2.165836826286675E-5 0.0 0.0 2.165836826286675E-5 2.165836826286675E-5 9 2.165836826286675E-5 0.0 0.0 2.165836826286675E-5 2.165836826286675E-5 10-11 2.165836826286675E-5 0.0 0.0 5.4145920657166874E-5 6.497510478860025E-5 12-13 2.165836826286675E-5 0.0 0.0 7.580428892003363E-5 1.5160857784006723E-4 14-15 2.165836826286675E-5 0.0 0.0 1.0829184131433375E-4 2.1658368262866747E-4 16-17 2.165836826286675E-5 0.0 0.0 1.0829184131433375E-4 2.59900419154401E-4 18-19 2.165836826286675E-5 0.0 0.0 1.0829184131433375E-4 2.923879715487011E-4 20-21 2.165836826286675E-5 0.0 0.0 2.165836826286675E-4 3.140463398115679E-4 22-23 6.497510478860025E-5 0.0 0.0 4.0067981286303483E-4 3.2487552394300126E-4 24-25 6.497510478860025E-5 0.0 0.0 8.12188809857503E-4 3.2487552394300126E-4 26-27 6.497510478860025E-5 0.0 0.0 0.0016352068038464397 3.46533892205868E-4 28-29 6.497510478860025E-5 0.0 0.0 0.004407477941493383 4.33167365257335E-4 30-31 6.497510478860025E-5 0.0 0.0 0.015247491257058191 4.6565491765163515E-4 32-33 6.497510478860025E-5 0.0 0.0 0.04070690315005805 4.981424700459353E-4 34-35 6.497510478860025E-5 0.0 0.0 0.07691969488557127 5.414592065716687E-4 36-37 6.497510478860025E-5 0.0 0.0 0.1383319980949299 5.414592065716687E-4 38-39 6.497510478860025E-5 0.0 0.0 0.23255672922253173 5.847759430974022E-4 40-41 6.497510478860025E-5 0.0 0.0 0.33579134154748613 5.847759430974022E-4 42-43 6.497510478860025E-5 0.0 0.0 0.4336763369115123 6.172634954917024E-4 44-45 6.497510478860025E-5 0.0 0.0 0.5526349245953079 6.280926796231358E-4 46-47 6.497510478860025E-5 0.0 0.0 0.6963923439400861 6.280926796231358E-4 48-49 1.73266946102934E-4 0.0 0.0 0.8445897287787518 6.280926796231358E-4 50-51 1.73266946102934E-4 0.0 0.0 0.9996744747250091 6.280926796231358E-4 52-53 1.73266946102934E-4 0.0 0.0 1.1568384240245018 7.472137050689028E-4 54-55 1.73266946102934E-4 0.0 0.0 1.3299754199178584 8.121888098575031E-4 56-57 2.165836826286675E-4 0.0 0.0 1.5304236181906903 8.446763622518032E-4 58-59 2.165836826286675E-4 0.0 0.0 1.7499744972713704 8.6633473051467E-4 60-61 2.165836826286675E-4 0.0 0.0 1.9771707803488425 8.6633473051467E-4 62-63 2.165836826286675E-4 0.0 0.0 2.205049302026595 8.879930987775367E-4 64-65 2.165836826286675E-4 0.0 0.0 2.449778034212858 8.879930987775367E-4 66-67 2.165836826286675E-4 0.0 0.0 2.7271242690029984 9.204806511718368E-4 68-69 2.3824205089153423E-4 0.0 0.0 3.0341857850497913 9.529682035661369E-4 70-71 2.3824205089153423E-4 0.0 0.0 3.372392034658587 9.854557559604371E-4 72-73 2.3824205089153423E-4 0.0 0.0 3.7077610380249473 0.001039601676617604 74-75 2.3824205089153423E-4 0.0 0.0 4.052497285664998 0.0010829184131433375 76-77 2.3824205089153423E-4 0.0 0.0 4.434128563640841 0.0010937475972747708 78-79 2.59900419154401E-4 0.0 0.0 4.8532504770797065 0.0011045767814062042 80-81 2.59900419154401E-4 0.0 0.0 5.299510325951944 0.0011045767814062042 82-83 2.7072960328583436E-4 0.0 0.0 5.768446486395405 0.0011695518861948044 84-85 2.8155878741726773E-4 0.0 0.0 6.2346861799901365 0.0011695518861948044 86-87 2.8155878741726773E-4 0.0 0.0 6.726471918950921 0.001212868622720538 88-89 2.8155878741726773E-4 0.0 0.0 7.257047795470498 0.0012561853592462716 90-91 2.923879715487011E-4 0.0 0.0 7.8352829113525155 0.0012561853592462716 92-93 3.0321715568013447E-4 0.0 0.0 8.425863297144366 0.0013428188322977385 94-95 3.0321715568013447E-4 0.0 0.0 9.017873135241565 0.001386135568823472 96-97 3.357047080744346E-4 2.165836826286675E-5 0.0 9.628769070463985 0.0014511106736120722 98-99 3.46533892205868E-4 2.165836826286675E-5 0.0 10.279462257369422 0.001472769041874939 100-101 3.46533892205868E-4 2.165836826286675E-5 0.0 10.984539606982917 0.001472769041874939 102-103 3.46533892205868E-4 2.165836826286675E-5 0.0 11.715704461169036 0.0014944274101378057 104-105 3.6819226046873473E-4 2.165836826286675E-5 0.0 12.43791358007846 0.0015160857784006724 106-107 3.6819226046873473E-4 3.2487552394300124E-5 0.0 13.159624556517837 0.0015269149625321058 108-109 3.6819226046873473E-4 4.33167365257335E-5 0.0 13.915631559101463 0.0015810608831892726 110-111 3.6819226046873473E-4 4.33167365257335E-5 0.0 14.703931188765026 0.0016027192514521396 112-113 3.6819226046873473E-4 4.33167365257335E-5 0.0 15.530468667596677 0.0016027192514521396 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 9400 0.0 34.22656 1 GTACATG 16125 0.0 30.002237 1 GGTATCA 6650 0.0 29.02824 1 TCAACGC 10750 0.0 28.587332 4 CAACGCA 10865 0.0 28.339565 5 ATCAACG 11060 0.0 27.840813 3 AACGCAG 11085 0.0 27.814856 6 TACATGG 16760 0.0 27.75387 2 ACATGGG 16360 0.0 27.704344 3 CATGGGG 10625 0.0 27.466259 4 TATCAAC 11575 0.0 27.013746 2 ACGCAGA 12680 0.0 24.032583 7 CGCAGAG 12685 0.0 23.880798 8 ATGGGGA 6040 0.0 19.326426 5 AGAGTAC 12745 0.0 19.167135 10-11 GCAGAGT 15805 0.0 18.526445 9 ATGGGGG 5795 0.0 17.882498 5 GTATAAT 2510 0.0 17.327919 1 CAGAGTA 14165 0.0 16.657524 10-11 GAGTACT 5530 0.0 16.4096 12-13 >>END_MODULE