##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920935_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2093168 Sequences flagged as poor quality 0 Sequence length 125 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.131302886342617 31.0 31.0 34.0 28.0 34.0 2 31.238408479395826 33.0 31.0 34.0 28.0 34.0 3 31.323305630508397 33.0 31.0 34.0 28.0 34.0 4 34.862555227291836 37.0 35.0 37.0 32.0 37.0 5 34.56914590706527 37.0 35.0 37.0 31.0 37.0 6 34.29045208029169 37.0 35.0 37.0 30.0 37.0 7 34.185684569991516 37.0 35.0 37.0 30.0 37.0 8 34.17826471644894 37.0 35.0 37.0 30.0 37.0 9 35.741710651032314 39.0 35.0 39.0 30.0 39.0 10-11 35.712976215955905 39.0 35.0 39.0 30.0 39.0 12-13 35.603084176712045 39.0 35.0 39.0 30.0 39.0 14-15 36.828401733640106 40.0 37.0 41.0 30.0 41.0 16-17 36.8325499912095 40.0 37.0 41.0 30.0 41.0 18-19 36.86007549322367 40.0 37.0 41.0 30.0 41.0 20-21 36.84919246806754 40.0 37.0 41.0 30.0 41.0 22-23 36.7904668903786 40.0 37.0 41.0 30.0 41.0 24-25 36.757357507854124 40.0 37.0 41.0 30.0 41.0 26-27 36.6180602799202 40.0 36.5 41.0 30.0 41.0 28-29 36.5142613970785 40.0 36.0 41.0 29.5 41.0 30-31 36.35923681233422 40.0 36.0 41.0 29.0 41.0 32-33 36.20187223385796 40.0 36.0 41.0 28.5 41.0 34-35 36.06861107182988 40.0 35.5 41.0 28.0 41.0 36-37 35.9238871414048 40.0 35.0 41.0 27.0 41.0 38-39 35.7853048584729 40.0 35.0 41.0 27.0 41.0 40-41 35.63893557516644 40.0 35.0 41.0 26.5 41.0 42-43 35.48356223676265 40.0 35.0 41.0 26.0 41.0 44-45 35.281308045985796 39.5 35.0 41.0 25.0 41.0 46-47 35.06860366678642 39.0 35.0 41.0 24.0 41.0 48-49 34.820504613103196 39.0 34.5 41.0 23.5 41.0 50-51 34.626095229814325 39.0 34.0 41.0 23.0 41.0 52-53 34.42303723351398 39.0 34.0 41.0 22.0 41.0 54-55 34.21522973789013 38.5 34.0 41.0 22.0 41.0 56-57 33.96457451098048 38.0 34.0 40.5 20.5 41.0 58-59 33.727764804353974 38.0 33.0 40.0 20.0 41.0 60-61 33.453545295934205 37.0 33.0 40.0 18.5 41.0 62-63 33.15029395633795 37.0 33.0 40.0 18.0 41.0 64-65 32.82778830939513 36.0 32.5 39.5 16.0 41.0 66-67 32.48553245606659 36.0 32.0 39.0 13.0 41.0 68-69 32.09637114651093 35.0 32.0 39.0 9.5 41.0 70-71 31.736377825382387 35.0 32.0 38.0 7.5 40.0 72-73 31.3661218306414 35.0 31.0 37.0 7.0 39.5 74-75 31.03614425597945 35.0 31.0 37.0 6.0 39.0 76-77 30.827310325783692 35.0 31.0 36.0 2.0 39.0 78-79 30.67431090098836 35.0 31.0 36.0 2.0 38.5 80-81 30.424431292662604 35.0 31.0 35.5 2.0 37.0 82-83 30.20675812930448 35.0 31.0 35.0 2.0 37.0 84-85 29.96756853726027 35.0 31.0 35.0 2.0 36.0 86-87 29.805753527667154 35.0 31.0 35.0 2.0 36.0 88-89 29.653257645826805 35.0 31.0 35.0 2.0 36.0 90-91 29.489059167730446 35.0 30.0 35.0 2.0 35.5 92-93 29.36359575533354 34.5 30.0 35.0 2.0 35.0 94-95 29.26614824992547 34.0 30.0 35.0 2.0 35.0 96-97 29.19620761448675 34.0 30.0 35.0 2.0 35.0 98-99 29.081972636692324 34.0 30.0 35.0 2.0 35.0 100-101 28.969210068183727 34.0 30.0 35.0 2.0 35.0 102-103 27.518061378733098 32.5 26.0 34.0 2.0 35.0 104-105 28.592889581724926 34.0 29.0 35.0 2.0 35.0 106-107 28.76505469221773 34.0 29.0 35.0 2.0 35.0 108-109 28.84201459223531 34.0 29.5 35.0 2.0 35.0 110-111 28.984935991759862 35.0 30.0 35.0 2.0 35.0 112-113 28.89965377838759 35.0 30.0 35.0 2.0 35.0 114-115 28.75091870313324 35.0 30.0 35.0 2.0 35.0 116-117 28.57251424634812 35.0 30.0 35.0 2.0 35.0 118-119 28.406287980706757 35.0 30.0 35.0 2.0 35.0 120-121 28.14322022885884 35.0 29.5 35.0 2.0 35.0 122-123 27.861844343120094 34.5 29.0 35.0 2.0 35.0 124-125 27.036237655075944 33.5 27.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 39152.0 3 15697.0 4 6716.0 5 5882.0 6 7213.0 7 8389.0 8 8997.0 9 9775.0 10 11618.0 11 13210.0 12 13410.0 13 14687.0 14 17612.0 15 15200.0 16 9992.0 17 9258.0 18 9086.0 19 8845.0 20 9473.0 21 9970.0 22 10038.0 23 10543.0 24 13439.0 25 17169.0 26 22262.0 27 26867.0 28 32633.0 29 39143.0 30 46992.0 31 57657.0 32 72540.0 33 91909.0 34 122938.0 35 179903.0 36 333112.0 37 561447.0 38 210092.0 39 302.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.084564972465586 18.573391040456755 11.54592557160074 25.796118415476926 2 17.33766395095279 21.251989962752102 35.5895640906563 25.820781995638804 3 19.207800645913355 24.3477326148025 29.89508685432552 26.54937988495863 4 13.592918104716805 16.12364746845845 34.994496233359705 35.28893819346504 5 13.898478681651607 37.44835856750491 34.21660903227781 14.43655371856567 6 33.86171506965872 35.45197503806193 16.271005767249765 14.415304125029577 7 28.24078587444589 32.010544083098694 21.355400210652277 18.393269831803142 8 27.236729564556743 33.42114190968124 20.28607470338922 19.05605382237279 9 26.675181318605183 14.076650024392423 19.206465019449436 40.04170363755296 10-11 25.575366673443533 25.190470945998733 27.856072744838574 21.378089635719164 12-13 26.046324613453876 22.830942229096383 27.76155995033594 23.3611732071138 14-15 23.351812778365407 24.334951429634312 25.059451121537375 27.253784670462906 16-17 23.23591956494729 27.064708356032153 26.17935888981277 23.520013189207788 18-19 23.38785076316517 25.892923916204154 27.886345124456813 22.832880196173864 20-21 24.031210922437147 25.270392246151435 27.492351130761616 23.206045700649803 22-23 23.69511109539616 25.292628536998272 27.411494709822676 23.60076565778289 24-25 23.44553653104125 25.52422266971732 27.665573518271074 23.364667280970355 26-27 23.23334979379037 25.565550485225124 27.638755799683167 23.562343921301338 28-29 23.429186314007207 25.760252632725717 27.5920931384881 23.21846791477898 30-31 23.38558804044968 25.67466099421311 27.52334475994441 23.416406205392796 32-33 23.15631490902523 25.837608638625255 27.380588895530604 23.625487556818914 34-35 23.54081233807377 25.597341136692258 27.453274935563993 23.40857158966998 36-37 23.611135335027917 25.41209660906843 27.40665542623833 23.570112629665317 38-39 23.358859935483824 25.43304469660171 27.50610648155559 23.701988886358873 40-41 23.325612590083967 25.392938363237477 27.719626632693483 23.561822413985073 42-43 23.512792276538054 25.29454335893756 27.42300155995505 23.76966280456934 44-45 23.269865336477228 25.441832205662017 27.408206822222315 23.880095635638444 46-47 23.35926920198822 25.502860861861514 27.2317063963462 23.906163539804066 48-49 23.199727441208605 25.659709106564797 27.00587430137099 24.134689150855603 50-51 23.01637928027496 25.762138963230118 27.11886840144933 24.10261335504559 52-53 23.26513459811451 25.530387932218712 27.082866970060614 24.121610499606163 54-55 22.86709006227652 25.620937487904744 27.01003410324055 24.501938346578182 56-57 22.80177121270441 25.750367768191236 26.769271423557377 24.678589595546978 58-59 22.648390720619428 25.493783594844917 27.057166844501236 24.800658840034423 60-61 22.659507569567293 25.728453182027998 27.01765929731708 24.594379951087628 62-63 22.395168660808686 25.76719014139194 27.079321653216414 24.758319544582964 64-65 22.245702728822447 25.69575236441003 26.887364846058006 25.17118006070952 66-67 22.350831863726928 25.9265329800703 26.758528117407316 24.964107038795458 68-69 22.76232119785017 25.470036544063117 26.80737341457634 24.960268843510374 70-71 22.53276895292973 25.409302815634486 26.803848343591934 25.25407988784385 72-73 22.59944012661664 25.497606823229873 26.658880559070557 25.24407249108293 74-75 22.534094785941797 25.549324793749363 26.554274044576704 25.362306375732143 76-77 22.644530917771448 25.41400007836114 26.606068975007574 25.335400028859834 78-79 22.60321477096447 25.651773681156207 26.494803514033894 25.25020803384543 80-81 22.66407936226546 25.685391175291468 26.3046383690999 25.34589109334317 82-83 22.45173577755634 25.487695069068682 26.46109034892341 25.59947880445157 84-85 22.47314360965559 25.46466500828078 26.274442158297166 25.78774922376646 86-87 22.485087501549962 25.466225374099615 26.279158721736017 25.769528402614405 88-89 22.461900221310454 25.444323206442782 26.056074712765888 26.037701859480883 90-91 22.364243967141803 25.43328020060472 26.071709115512082 26.130766716741398 92-93 22.459155506988704 25.231845923100117 26.218215403963065 26.090783165948118 94-95 22.278017773772625 25.10262277582962 26.395304222596938 26.224055227800825 96-97 22.383066845498536 24.930728134626566 26.320633053347102 26.365571966527796 98-99 22.324224848658456 25.186544476938437 26.106574932789517 26.382655741613593 100-101 22.33539479327065 25.104520438795902 26.187820224128515 26.37226454380493 102-103 22.07506731878881 25.023690001457478 26.329136909810742 26.572105769942965 104-105 21.924821212202293 25.350289347649095 26.078030219055666 26.646859221092946 106-107 21.94484571904174 25.635056368098457 25.936038196192186 26.48405971666762 108-109 21.84819722921168 25.801807501216057 25.92630375844429 26.423691511127974 110-111 21.811073377761268 25.939693798444985 25.89339446056374 26.35583836323001 112-113 21.667999314842852 26.24796907523613 25.842990553288285 26.24104105663273 114-115 21.55000948393536 26.443170682647455 25.701632049108152 26.30518778430903 116-117 21.507606184514444 26.557278519339928 25.759668887730037 26.175446408415592 118-119 21.547414009330634 26.70800079308014 25.498720799959866 26.245864397629358 120-121 21.42910890668114 26.930495958522933 25.460624712001312 26.17977042279461 122-123 21.40406095469055 27.064272451500234 25.29190157221594 26.239765021593275 124-125 21.207201857292425 27.333672693535043 25.24945005254032 26.209675396632214 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 33.0 1 50.5 2 156.0 3 257.5 4 194.0 5 140.0 6 213.0 7 426.5 8 675.5 9 734.5 10 572.5 11 435.0 12 467.0 13 501.0 14 507.5 15 556.0 16 645.0 17 752.5 18 834.0 19 927.5 20 1090.0 21 1263.0 22 1576.5 23 1960.0 24 2334.5 25 3099.5 26 4370.0 27 6066.0 28 8053.5 29 10674.5 30 13666.5 31 17501.0 32 23284.5 33 26567.5 34 27814.0 35 31142.5 36 35663.0 37 39941.5 38 44431.5 39 48334.5 40 52152.0 41 57102.0 42 61155.5 43 66301.0 44 71750.0 45 76906.0 46 82101.0 47 85235.5 48 88060.5 49 91489.0 50 95514.0 51 97165.0 52 94272.0 53 91822.0 54 88503.5 55 82428.5 56 75839.0 57 68128.0 58 61424.5 59 54214.5 60 44454.0 61 35521.0 62 28614.5 63 21538.5 64 15165.5 65 11326.0 66 8602.0 67 6621.5 68 5224.5 69 3923.5 70 2965.5 71 2286.0 72 1847.0 73 1605.0 74 1233.0 75 926.5 76 700.5 77 431.5 78 260.5 79 152.0 80 82.5 81 58.0 82 45.0 83 31.5 84 18.5 85 11.0 86 7.0 87 6.0 88 7.5 89 5.0 90 3.0 91 3.5 92 4.0 93 4.0 94 4.5 95 5.5 96 4.5 97 4.5 98 3.0 99 1.0 100 0.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.22411005710005122 2 0.007835013720828907 3 3.821957912599466E-4 4 0.0026753705388196263 5 0.08714064040726784 6 0.05651720263256461 7 0.029620173822645864 8 0.01710326165888261 9 0.014571214541785466 10-11 0.012588573874624493 12-13 0.014642876252646706 14-15 0.023051183660365532 16-17 0.026180411701306344 18-19 0.025535456303555183 20-21 0.01791542771531 22-23 0.015622252967750319 24-25 0.01354406335277436 26-27 0.013066318613699427 28-29 0.015646140204704066 30-31 0.011776407818197106 32-33 0.016004448759010265 34-35 0.01882314271955237 36-37 0.020280264173730918 38-39 0.024579966825405315 40-41 0.025654892488323918 42-43 0.022907860238643052 44-45 0.02071023443889836 46-47 0.021116317467112053 48-49 0.019515872591211025 50-51 0.016291095602455223 52-53 0.01383071019621932 54-55 0.0193486619325348 56-57 0.022812311290828065 58-59 0.01906201508908984 60-61 0.021307415362742024 62-63 0.02773308210329988 64-65 0.01985029390856348 66-67 0.023290056029903 68-69 0.016816614815437652 70-71 0.01774821705663377 72-73 0.026371509596936318 74-75 0.015574478493842825 76-77 0.014045695328803039 78-79 0.017174923369743852 80-81 0.018393172454384932 82-83 0.013735161248404333 84-85 0.017676555345772532 86-87 0.01798708942617124 88-89 0.019420323643396038 90-91 0.014141244276618026 92-93 0.013902371907080558 94-95 0.014762312437415439 96-97 0.015622252967750319 98-99 0.01445177835701673 100-101 0.018894804430413612 102-103 0.02450830511454408 104-105 0.008790503198978773 106-107 0.00881439043593252 108-109 0.015956674285102772 110-111 0.01268412282243948 112-113 0.0103909480748798 114-115 0.007405043455661466 116-117 0.004849109101610573 118-119 0.00300979185617208 120-121 0.0028425811974958533 122-123 0.0018870917193459865 124-125 6.449553977511599E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 2093168.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.37644609525415 #Duplication Level Percentage of deduplicated Percentage of total 1 69.4089996688207 32.88351731335397 2 13.990316219414032 13.256229244492577 3 6.127299768255167 8.708690615406125 4 3.287003932977645 6.229062585824151 5 1.9446622673628997 4.606559354159658 6 1.25684771396991 3.572698678250331 7 0.8467060079056119 2.807974507944764 8 0.5880067034531644 2.228613431183755 9 0.4388588784951573 1.8712416600404558 >10 1.9841603725589796 15.76942871687517 >50 0.08383842731083331 2.725412250247618 >100 0.03946650238365163 3.3672294642604883 >500 0.0022194162112967562 0.7196906247756182 >1k 0.001614120880943092 1.2536515531853125 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3292 0.15727356810346804 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2742 0.13099760745434672 No Hit CTTATACACATCTCCGAGCCCACGAGACGTAGAGGAATCTCGTATGCCGT 2666 0.12736674743737722 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.4332342172247999E-4 2 0.0 0.0 0.0 0.0 1.4332342172247999E-4 3 0.0 0.0 0.0 0.0 1.4332342172247999E-4 4 0.0 0.0 0.0 0.0 1.4332342172247999E-4 5 0.0 0.0 0.0 0.0 1.9109789562997333E-4 6 0.0 0.0 0.0 0.0 2.8664684344495997E-4 7 0.0 0.0 0.0 0.0 2.8664684344495997E-4 8 0.0 0.0 0.0 0.0 2.8664684344495997E-4 9 0.0 0.0 0.0 0.0 2.8664684344495997E-4 10-11 0.0 0.0 0.0 0.0 2.8664684344495997E-4 12-13 0.0 0.0 0.0 2.3887236953746667E-5 7.405043455661467E-4 14-15 0.0 0.0 0.0 4.777447390749333E-5 8.360532933811333E-4 16-17 0.0 0.0 0.0 9.554894781498667E-5 9.554894781498666E-4 18-19 0.0 0.0 0.0 1.1943618476873333E-4 9.554894781498666E-4 20-21 0.0 0.0 0.0 3.3442131735245335E-4 0.0011704746107335864 22-23 0.0 0.0 0.0 0.0010988128998723466 0.0014332342172248 24-25 0.0 0.0 0.0 0.0028186939605421065 0.0014332342172248 26-27 0.0 0.0 0.0 0.0050163197602868005 0.0017915427715309998 28-29 0.0 0.0 0.0 0.021116317467112053 0.00186320448239224 30-31 0.0 0.0 0.0 0.0719722449416387 0.00186320448239224 32-33 0.0 0.0 0.0 0.16023558548573263 0.00186320448239224 34-35 0.0 0.0 0.0 0.3032723603647677 0.0020543023780222134 36-37 0.0 0.0 0.0 0.532924256438088 0.0020543023780222134 38-39 0.0 0.0 0.0 0.8682055143208762 0.00207818961497596 40-41 0.0 0.0 0.0 1.2285683710050985 0.0021020768519297065 42-43 0.0 0.0 0.0 1.5574478493842827 0.0021259640888834533 44-45 0.0 0.0 0.0 1.9603538750831275 0.002197625799744693 46-47 0.0 0.0 0.0 2.461627542557501 0.00229317474755968 48-49 0.0 0.0 0.0 2.969326876772433 0.002484272643189653 50-51 0.0 0.0 0.0 3.493006772509421 0.0025320471170971466 52-53 0.0 0.0 0.0 3.9933727249795523 0.002770919486634613 54-55 0.0 0.0 0.0 4.544714041108979 0.002770919486634613 56-57 0.0 0.0 0.0 5.20548278972352 0.0027948067235883597 58-59 0.0 0.0 0.0 5.908675271167914 0.0028186939605421065 60-61 0.0 0.0 0.0 6.620132736598304 0.002890355671403347 62-63 0.0 0.0 0.0 7.304167654005794 0.0032725514626632934 64-65 0.0 0.0 0.0 8.019924822087859 0.0032964386996170397 66-67 0.0 0.0 0.0 8.84334176712046 0.0032964386996170397 68-69 0.0 0.0 0.0 9.755905880464445 0.0032964386996170397 70-71 0.0 0.0 0.0 10.70807503267774 0.003344213173524533 72-73 0.0 0.0 0.0 11.621594635499875 0.003487536595247013 74-75 0.0 0.0 0.0 12.523505041162487 0.003630860016969493 76-77 0.0 0.0 0.0 13.537398813664264 0.0036786344908769863 78-79 0.0 0.0 0.0 14.638385452099401 0.0037502962017382266 80-81 0.0 0.0 0.0 15.785546119566131 0.0038219579125994664 82-83 0.0 0.0 0.0 16.945343135381393 0.003989168571275693 84-85 0.0 0.0 0.0 18.064770720744825 0.0040369430451831865 86-87 0.0 0.0 0.0 19.23417040581549 0.004299702651674399 88-89 0.0 0.0 0.0 20.4914990101129 0.004538575021211866 90-91 0.0 0.0 0.0 21.80613309586235 0.004562462258165613 92-93 0.0 0.0 0.0 23.11448483829296 0.004968545286379306 94-95 0.0 0.0 0.0 24.387985102008056 0.005040206997240546 96-97 0.0 0.0 0.0 25.68167008094907 0.005494064499361733 98-99 0.0 0.0 0.0 27.053729084335323 0.00587626029062168 100-101 0.0 0.0 0.0 28.501653952286677 0.00587626029062168 102-103 0.0 0.0 0.0 29.95996976831291 0.00587626029062168 104-105 0.0 0.0 0.0 31.345931143606247 0.00587626029062168 106-107 0.0 0.0 0.0 32.735332281020916 0.005924034764529173 108-109 0.0 0.0 0.0 34.162785786902916 0.005924034764529173 110-111 0.0 0.0 0.0 35.63402459812113 0.005971809238436666 112-113 0.0 0.0 0.0 37.12597364377824 0.006067358186251653 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 4120 0.0 42.57586 1 GTATCAA 6190 0.0 39.22989 1 TCAACGC 7505 0.0 31.816662 4 CAACGCA 7630 0.0 31.373465 5 ATCAACG 7655 0.0 31.193214 3 AACGCAG 7815 0.0 30.537056 6 TATCAAC 7955 0.0 30.391851 2 GTACATG 7690 0.0 27.77602 1 TACATGG 7690 0.0 27.48991 2 TATACCG 110 7.7175786E-4 27.066885 5 CATGGGG 5025 0.0 26.899902 4 TAATGCG 90 0.009493989 26.465397 5 ACATGGG 7790 0.0 26.295528 3 ACGCAGA 9025 0.0 26.172865 7 CGCAGAG 9205 0.0 25.466547 8 ATGGGGA 2610 0.0 23.955748 5 GCAGAGT 10070 0.0 22.86487 9 CGTACAC 185 2.6754295E-5 22.531351 3 GAGTACT 5470 0.0 22.027037 12-13 AGAGTAC 9065 0.0 21.594664 10-11 >>END_MODULE