##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920934_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1693518 Sequences flagged as poor quality 0 Sequence length 125 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.993842994287633 31.0 31.0 34.0 26.0 34.0 2 30.1213928638491 31.0 31.0 34.0 26.0 34.0 3 30.222494239801406 31.0 31.0 34.0 26.0 34.0 4 33.63262687494316 37.0 35.0 37.0 28.0 37.0 5 33.76250798633377 37.0 35.0 37.0 28.0 37.0 6 33.72168999679956 37.0 35.0 37.0 28.0 37.0 7 33.646019705725 37.0 35.0 37.0 28.0 37.0 8 33.5622331737838 37.0 35.0 37.0 28.0 37.0 9 35.021471870980996 39.0 35.0 39.0 27.0 39.0 10-11 35.036577408684174 39.0 35.0 39.0 27.0 39.0 12-13 34.9835357522034 39.0 35.0 39.0 27.0 39.0 14-15 36.16131449444293 40.0 36.0 41.0 27.0 41.0 16-17 36.14757947656889 40.0 36.0 41.0 27.0 41.0 18-19 36.131587027713906 40.0 36.0 41.0 27.0 41.0 20-21 36.153455705814764 40.0 36.0 41.0 27.0 41.0 22-23 36.0693700923167 40.0 36.0 41.0 27.0 41.0 24-25 36.06019392767009 40.0 36.0 41.0 27.0 41.0 26-27 35.97635690910873 40.0 36.0 41.0 27.0 41.0 28-29 35.84943945089453 40.0 36.0 41.0 27.0 41.0 30-31 35.68769685353212 40.0 35.5 41.0 26.5 41.0 32-33 35.54281973973704 40.0 35.0 41.0 26.0 41.0 34-35 35.456288034730065 40.0 35.0 41.0 25.5 41.0 36-37 35.31054526730746 40.0 35.0 41.0 25.0 41.0 38-39 35.1631842708492 39.5 35.0 41.0 24.5 41.0 40-41 35.02770741143584 39.0 35.0 41.0 24.0 41.0 42-43 34.84365031844952 39.0 34.5 41.0 23.5 41.0 44-45 34.69453675721191 39.0 34.0 41.0 23.0 41.0 46-47 34.499085926456054 39.0 34.0 41.0 23.0 41.0 48-49 34.363729821590326 39.0 34.0 41.0 22.0 41.0 50-51 34.162049355247476 38.5 33.0 40.5 20.5 41.0 52-53 33.96148549941601 38.0 33.0 40.0 19.5 41.0 54-55 33.717708934891746 38.0 33.0 40.0 18.5 41.0 56-57 33.45137902283885 38.0 33.0 40.0 17.5 41.0 58-59 33.17601436772446 37.5 32.5 40.0 14.5 41.0 60-61 32.903538373964736 37.0 32.0 40.0 13.0 41.0 62-63 32.58623528064065 36.5 32.0 40.0 10.5 41.0 64-65 32.28323495823487 36.0 31.5 39.0 8.0 41.0 66-67 31.927704340904555 35.5 31.0 39.0 7.5 41.0 68-69 31.587817489982392 35.0 31.0 38.5 7.0 40.0 70-71 31.218977595750385 35.0 31.0 38.0 6.5 40.0 72-73 31.26939188127909 35.0 31.0 37.0 2.0 40.0 74-75 31.250679355046714 35.0 31.0 37.0 2.0 39.0 76-77 30.97601708396368 35.0 31.0 36.5 2.0 39.0 78-79 30.66976849375088 35.0 31.0 36.0 2.0 39.0 80-81 30.38827104288233 35.0 31.0 36.0 2.0 37.0 82-83 30.131298870162585 35.0 31.0 35.0 2.0 37.0 84-85 29.877855151229568 35.0 31.0 35.0 2.0 36.5 86-87 29.66279100665006 35.0 31.0 35.0 2.0 36.0 88-89 29.440825252521673 35.0 30.5 35.0 2.0 36.0 90-91 29.23398836032448 34.5 30.0 35.0 2.0 35.5 92-93 29.026173917253907 34.0 30.0 35.0 2.0 35.0 94-95 28.865891298468632 34.0 30.0 35.0 2.0 35.0 96-97 28.72753433975901 34.0 29.5 35.0 2.0 35.0 98-99 28.54347045617466 34.0 29.0 35.0 2.0 35.0 100-101 28.35711814105312 34.0 29.0 35.0 2.0 35.0 102-103 26.94239889980502 32.5 26.0 34.5 2.0 35.0 104-105 27.917790067776075 34.0 28.5 35.0 2.0 35.0 106-107 28.014817970638635 34.0 29.0 35.0 2.0 35.0 108-109 27.880986207409663 34.0 29.0 35.0 2.0 35.0 110-111 27.708659724904017 34.0 28.0 35.0 2.0 35.0 112-113 27.510127438858046 34.0 27.0 35.0 2.0 35.0 114-115 27.308729520442064 34.0 27.0 35.0 2.0 35.0 116-117 26.987311324709864 34.0 25.0 35.0 2.0 35.0 118-119 26.672608735189115 34.0 25.0 35.0 2.0 35.0 120-121 26.36967720449384 34.0 24.5 35.0 2.0 35.0 122-123 25.947109508136318 34.0 22.0 35.0 2.0 35.0 124-125 24.491165431958798 32.5 10.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 53195.0 3 8084.0 4 5579.0 5 6715.0 6 9771.0 7 9507.0 8 7916.0 9 8550.0 10 9086.0 11 9444.0 12 9443.0 13 9328.0 14 9547.0 15 8910.0 16 7425.0 17 7308.0 18 7293.0 19 7611.0 20 8180.0 21 8975.0 22 10849.0 23 13190.0 24 16566.0 25 19828.0 26 22547.0 27 25425.0 28 29367.0 29 34577.0 30 40460.0 31 49845.0 32 62461.0 33 79415.0 34 106929.0 35 153214.0 36 267828.0 37 409891.0 38 139088.0 39 171.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.52988877289383 18.07397593283196 10.798522492362563 25.59761280191165 2 17.09262256642742 21.541755939303872 35.91678439911507 25.448837095153642 3 19.423022433021256 24.796347114076966 29.207352385301615 26.57327806760016 4 13.051731591107599 16.288127203925214 35.84641668297835 34.81372452198884 5 13.625552258158397 38.383102867158144 33.97550750964622 14.015837365037246 6 33.00264655826241 35.86497291667036 17.099414706871652 14.032965818195574 7 27.95406220683711 32.875326820277365 21.199116380826386 17.97149459205913 8 26.826921371956807 34.04653966865458 20.37744770641117 18.74909125297744 9 26.726954823486015 15.133966676203064 18.871249181327894 39.267829318983026 10-11 25.162943455015906 26.14004271872662 27.715872004576838 20.98114182168064 12-13 25.424400385058366 23.904140795680917 27.3786188601776 23.292839959083118 14-15 23.09232628434498 25.27690203019138 24.55875617906814 27.072015506395502 16-17 23.159257642914906 27.85886693954543 25.705699281617562 23.276176135922107 18-19 23.249541884004614 27.1919986148676 26.89541245803681 22.663047043090973 20-21 24.10117279179755 26.575983294452993 26.35756204900577 22.965281864743687 22-23 23.774602267708477 26.391527570285756 26.121749375111335 23.712120786894427 24-25 23.334336814595954 26.59929456941348 26.427560420847634 23.638808195142936 26-27 23.235920410739816 26.61713143372767 26.37039089952599 23.776557256006527 28-29 23.3378467931046 26.970497454568232 26.433579904339865 23.258075847987307 30-31 23.432508895724734 26.96757713665795 26.20294660910691 23.396967358510413 32-33 23.059283761044885 27.196811331709252 26.06083347983519 23.68307142741067 34-35 23.30884182174773 27.04204428681423 26.28271682049203 23.366397070946004 36-37 23.492393195980462 26.678150493282555 26.267982874718935 23.561473436018048 38-39 23.25680131417226 26.853875153635247 26.37849224732911 23.510831284863382 40-41 23.234315085209193 26.929815801121233 26.538472220662822 23.297396893006752 42-43 23.10065833463586 26.899976923865598 26.364350592962104 23.63501414853644 44-45 23.0039503971226 26.826006145850045 26.590684082567467 23.57935937445989 46-47 22.949012174398074 26.855614853191085 26.55651369294802 23.638859279462825 48-49 22.745102209744 26.942026493767685 26.50304363418725 23.80982766230106 50-51 22.625038886083935 27.006780433142968 26.539142961050104 23.829037719722994 52-53 22.92787613286268 26.743447447816525 26.454212198814226 23.87446422050657 54-55 22.530533283265612 26.707357030019065 26.614706142168888 24.147403544546435 56-57 22.594168467224627 26.74674311491553 26.427266568358615 24.231821849501227 58-59 22.643020507084927 26.311743849617468 26.643287561808105 24.401948081489504 60-61 22.45596837085188 26.408341472840046 26.74506001372046 24.390630142587614 62-63 22.428545894740264 26.23044050501275 26.858087397872588 24.482926202374394 64-65 22.273007110015584 26.12469882578985 26.765066982089664 24.837227082104903 66-67 22.267317831774992 26.28512393398105 26.698370147244816 24.74918808699914 68-69 22.683529374922077 25.894270488350067 26.85269493911947 24.569505197608386 70-71 22.306361771174764 25.745786170396617 27.049248371853942 24.89860368657468 72-73 22.277089815749463 25.725329006159015 27.099815397922494 24.897765780169028 74-75 22.147464634573257 25.710521223687337 27.168624068135593 24.97339007360381 76-77 22.03774666363338 25.506770231662173 27.433516413712418 25.02196669099203 78-79 22.19787225682524 25.670588297855684 27.45400825607603 24.677531189243055 80-81 22.21762016826186 25.498750059823415 27.32323139816636 24.96039837374836 82-83 22.19144734023774 25.416635276287042 27.371199732923262 25.020717650551955 84-85 22.11784191272707 25.3593040288495 27.331834842165037 25.191019216258393 86-87 22.061098718131653 25.22507511859003 27.43628398505043 25.277542178227886 88-89 22.17357934503756 25.05403268785591 27.37215021146308 25.400237755643445 90-91 22.168053945065253 25.117100083458276 27.39384181333412 25.32100415814235 92-93 22.369594155067258 24.926072779244013 27.370737405194433 25.333595660494296 94-95 22.110899574444954 24.802230943678065 27.583997192116655 25.502872289760326 96-97 22.165003270076408 24.556294645995767 27.54854748936708 25.730154594560744 98-99 22.183376934583947 24.71425819975281 27.420253430792172 25.682111434871075 100-101 22.03088228039584 24.857125217890136 27.576021908795862 25.53597059291816 102-103 21.87522338716681 24.907381095995778 27.59464378866998 25.62275172816743 104-105 21.59382934705167 25.045429787053042 27.502360104021804 25.858380761873477 106-107 21.603011129551717 25.136438484367403 27.446306426921733 25.81424395915915 108-109 21.57298976058601 25.23815699410675 27.51548939943995 25.673363845867293 110-111 21.553469766397523 25.587167374239616 27.45329870805156 25.4060641513113 112-113 21.488006906121825 25.90755853407992 27.34884512425022 25.255589435548032 114-115 21.326902060471337 26.042075674998543 27.280320240044126 25.350702024485987 116-117 21.145973951994876 25.99505938225437 27.34095078380085 25.518015881949907 118-119 21.338195423281604 26.02097537038082 27.15101835337522 25.489810852962353 120-121 21.3641740634864 26.24276616438016 27.197153854244345 25.195905917889093 122-123 21.444052109626856 26.518938427068267 26.955145022074745 25.081864441230135 124-125 21.48043618992409 26.63317859800992 26.707133632285405 25.179251579780583 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 874.0 1 694.0 2 440.0 3 341.0 4 277.5 5 224.5 6 201.5 7 203.5 8 218.0 9 252.0 10 253.5 11 222.5 12 260.0 13 315.5 14 351.5 15 400.5 16 471.5 17 554.5 18 649.0 19 799.5 20 969.0 21 1242.0 22 1584.5 23 2017.0 24 2607.5 25 3318.5 26 4417.5 27 6016.5 28 7513.5 29 9226.5 30 11359.0 31 14115.0 32 18582.5 33 21611.0 34 23483.5 35 26755.0 36 30931.5 37 34749.5 38 38168.0 39 41621.5 40 45273.0 41 49369.0 42 52425.0 43 56985.5 44 61950.0 45 65616.5 46 69358.5 47 71770.5 48 73706.0 49 76176.5 50 78698.5 51 78776.5 52 75251.5 53 71453.5 54 67592.5 55 61980.5 56 55732.0 57 49584.5 58 44640.0 59 38946.5 60 31767.0 61 26078.5 62 20866.5 63 15409.5 64 11076.0 65 8298.5 66 6307.5 67 4836.0 68 3684.5 69 2794.5 70 2222.5 71 1682.5 72 1331.5 73 1083.0 74 816.0 75 598.5 76 426.5 77 299.5 78 200.5 79 127.0 80 84.5 81 68.0 82 50.0 83 40.0 84 37.0 85 35.0 86 27.5 87 17.0 88 12.5 89 10.5 90 7.5 91 9.0 92 8.0 93 6.0 94 6.5 95 5.5 96 7.0 97 7.0 98 4.5 99 6.0 100 12.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.16728490633108123 2 0.14980649748039288 3 0.17826796054131103 4 0.14768074505260648 5 0.17472503982833368 6 0.1114248564231381 7 0.10859051985275621 8 0.09613124867878582 9 0.10357138217603828 10-11 0.08975399139542656 12-13 0.07717662286435692 14-15 0.07753091493565466 16-17 0.07756043927492946 18-19 0.07446038365107428 20-21 0.06766978561786766 22-23 0.06002298174569152 24-25 0.06356590245866889 26-27 0.07407656724050173 28-29 0.06923457559943266 30-31 0.06684310411817294 32-33 0.0753165894900438 34-35 0.0726889232945856 36-37 0.07575945457916597 38-39 0.07074031690244804 40-41 0.0750508704365705 42-43 0.07637946570393701 44-45 0.0682897967426387 46-47 0.06578022790427973 48-49 0.05721816951458444 50-51 0.06344780510156962 52-53 0.06637071468977596 54-55 0.0675221639214936 56-57 0.0719508148127153 58-59 0.05792675365717991 60-61 0.06820122372481427 62-63 0.06409734056561547 64-65 0.05763151026443179 66-67 0.06285731831607341 68-69 0.06524878979733312 70-71 0.06055441985263812 72-73 0.0565981583898134 74-75 0.05966868967439378 76-77 0.06985458672420371 78-79 0.06303446435172227 80-81 0.06123347965595878 82-83 0.06616404431485227 84-85 0.06784693165351653 86-87 0.06067251720973736 88-89 0.06046584683481369 90-91 0.0623258802091268 92-93 0.057572461585882174 94-95 0.06731549354656992 96-97 0.0529666646590116 98-99 0.0534981027659582 100-101 0.051047582606148854 102-103 0.04895135451763725 104-105 0.0470027481254997 106-107 0.05887153251397387 108-109 0.0584286674248517 110-111 0.0657211792257301 112-113 0.06533736281515756 114-115 0.06864408881393644 116-117 0.07200986349126494 118-119 0.06521926545805831 120-121 0.06637071468977596 122-123 0.0641268649048903 124-125 0.07519849213294456 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 1693518.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.07161605627291 #Duplication Level Percentage of deduplicated Percentage of total 1 71.45605510622576 37.20832266387267 2 14.019918904893352 14.600796687113773 3 5.808100702306484 9.073115693600167 4 2.9031809587964745 6.046932969133291 5 1.6235859611726082 4.227137240226743 6 1.0260914010228963 3.2058142483624446 7 0.7118260337443106 2.594615234959531 8 0.45655588338169 1.9018882134147097 9 0.3350927982515478 1.570394118039904 >10 1.5663662832225047 13.880282781186631 >50 0.06491506860736218 2.289260105788628 >100 0.025923528702047782 2.4111294721369947 >500 0.0018189483222728888 0.6325816709994893 >1k 5.684213507102778E-4 0.35772890116506767 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 0.0 0.0 12-13 0.0 0.0 0.0 0.0 0.0 14-15 0.0 0.0 0.0 0.0 0.0 16-17 0.0 0.0 0.0 2.952433927481137E-5 0.0 18-19 0.0 0.0 0.0 8.857301782443412E-5 0.0 20-21 0.0 0.0 0.0 1.771460356488682E-4 0.0 22-23 0.0 0.0 0.0 3.838164105725478E-4 0.0 24-25 0.0 0.0 0.0 0.0011809735709924548 0.0 26-27 0.0 0.0 0.0 0.0028933852489315143 0.0 28-29 0.0 0.0 0.0 0.01836413902893267 0.0 30-31 0.0 0.0 0.0 0.06784693165351653 0.0 32-33 0.0 0.0 0.0 0.15550469496043148 0.0 34-35 0.0 0.0 0.0 0.29604054990853357 0.0 36-37 0.0 0.0 0.0 0.5281904296263754 2.952433927481137E-5 38-39 0.0 0.0 0.0 0.8695803646610193 5.904867854962274E-5 40-41 0.0 0.0 0.0 1.2533672508942924 5.904867854962274E-5 42-43 0.0 0.0 0.0 1.6035849633721049 5.904867854962274E-5 44-45 0.0 0.0 0.0 2.0229191540922504 8.857301782443412E-5 46-47 0.0 0.0 0.0 2.5299406324585862 1.1809735709924548E-4 48-49 0.0 0.0 0.0 3.056654845121221 1.1809735709924548E-4 50-51 0.0 0.0 0.0 3.622429758644431 1.1809735709924548E-4 52-53 0.0 0.0 0.0 4.161544193802486 1.1809735709924548E-4 54-55 0.0 0.0 0.0 4.7489604480141345 1.1809735709924548E-4 56-57 0.0 0.0 0.0 5.421849664426359 1.4762169637405685E-4 58-59 0.0 0.0 0.0 6.145343598355613 1.771460356488682E-4 60-61 0.0 0.0 0.0 6.896678984221012 1.771460356488682E-4 62-63 0.0 0.0 0.0 7.628469257486486 1.771460356488682E-4 64-65 0.0 0.0 0.0 8.378210329031045 1.771460356488682E-4 66-67 0.0 0.0 0.0 9.252573636654585 1.771460356488682E-4 68-69 0.0 0.0 0.0 10.208601266712252 1.771460356488682E-4 70-71 0.0 0.0 0.0 11.233568228976605 1.771460356488682E-4 72-73 5.904867854962274E-5 0.0 0.0 12.219858306790952 1.771460356488682E-4 74-75 5.904867854962274E-5 2.952433927481137E-5 0.0 13.177864067580032 1.771460356488682E-4 76-77 5.904867854962274E-5 5.904867854962274E-5 0.0 14.2432498503116 1.771460356488682E-4 78-79 5.904867854962274E-5 5.904867854962274E-5 0.0 15.413299415772375 1.771460356488682E-4 80-81 5.904867854962274E-5 8.857301782443412E-5 0.0 16.625244018664105 1.771460356488682E-4 82-83 5.904867854962274E-5 1.1809735709924548E-4 0.0 17.843270635446448 1.771460356488682E-4 84-85 5.904867854962274E-5 1.4762169637405685E-4 0.0 19.002219049339892 1.771460356488682E-4 86-87 5.904867854962274E-5 1.771460356488682E-4 0.0 20.204656814985135 1.771460356488682E-4 88-89 5.904867854962274E-5 1.771460356488682E-4 0.0 21.50626683625447 1.771460356488682E-4 90-91 5.904867854962274E-5 1.771460356488682E-4 0.0 22.862408312164384 1.771460356488682E-4 92-93 5.904867854962274E-5 1.771460356488682E-4 0.0 24.226344213642843 1.771460356488682E-4 94-95 5.904867854962274E-5 1.771460356488682E-4 0.0 25.541210663246567 1.771460356488682E-4 96-97 5.904867854962274E-5 1.771460356488682E-4 0.0 26.87405743546865 1.771460356488682E-4 98-99 5.904867854962274E-5 1.771460356488682E-4 0.0 28.27498733405845 1.771460356488682E-4 100-101 5.904867854962274E-5 2.3619471419849097E-4 0.0 29.753271001548256 1.771460356488682E-4 102-103 5.904867854962274E-5 2.3619471419849097E-4 0.0 31.260665667563025 1.771460356488682E-4 104-105 5.904867854962274E-5 2.3619471419849097E-4 0.0 32.678158720485996 1.771460356488682E-4 106-107 5.904867854962274E-5 2.3619471419849097E-4 0.0 34.066747445258926 1.771460356488682E-4 108-109 5.904867854962274E-5 2.3619471419849097E-4 0.0 35.49667024501659 1.771460356488682E-4 110-111 5.904867854962274E-5 2.3619471419849097E-4 0.0 36.98829891385861 1.771460356488682E-4 112-113 5.904867854962274E-5 2.3619471419849097E-4 0.0 38.487338191858605 1.771460356488682E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CATGGGG 4645 0.0 34.108112 4 GTACATG 7970 0.0 32.601242 1 TACATGG 8080 0.0 31.256615 2 ACATGGG 7910 0.0 30.874138 3 GTATCAA 4585 0.0 28.075039 1 GTATAGT 250 6.89397E-10 26.221567 1 ATGGGGC 1920 0.0 24.81707 5 TCAACGC 5040 0.0 24.344362 4 AACGCAG 5115 0.0 24.20526 6 ATGGGGA 2295 0.0 23.61677 5 CAACGCA 5240 0.0 23.41519 5 TATCAAC 5420 0.0 23.188393 2 ATCAACG 5425 0.0 22.947428 3 GTGTAGC 1035 0.0 22.455885 1 GTATACG 135 0.0025323404 22.072025 1 TACGATA 135 0.002539749 22.060925 2 ATGGGGG 2215 0.0 22.04966 5 GGTATCA 3545 0.0 22.022217 1 TAGTACG 165 3.193958E-4 21.658533 4 ATAATGG 970 0.0 21.492344 3 >>END_MODULE