##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920930_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4396224 Sequences flagged as poor quality 0 Sequence length 125 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.659404525338108 31.0 30.0 34.0 25.0 34.0 2 29.83110824198221 31.0 30.0 34.0 25.0 34.0 3 30.024796734652284 31.0 31.0 34.0 25.0 34.0 4 33.42668981380385 37.0 35.0 37.0 27.0 37.0 5 33.525430915258184 37.0 35.0 37.0 28.0 37.0 6 33.496141916335475 37.0 35.0 37.0 28.0 37.0 7 33.3621969672155 37.0 35.0 37.0 27.0 37.0 8 33.35274339979036 37.0 35.0 37.0 27.0 37.0 9 34.784022379205425 39.0 35.0 39.0 27.0 39.0 10-11 34.78397574827852 39.0 35.0 39.0 27.0 39.0 12-13 34.732938881185305 39.0 35.0 39.0 27.0 39.0 14-15 35.90523776768427 40.0 36.0 41.0 27.0 41.0 16-17 35.89641576498377 40.0 36.0 41.0 27.0 41.0 18-19 35.87203552412252 40.0 36.0 41.0 27.0 41.0 20-21 35.887988419152435 40.0 36.0 41.0 27.0 41.0 22-23 35.82229226718202 40.0 36.0 41.0 27.0 41.0 24-25 35.82721490078758 40.0 36.0 41.0 27.0 41.0 26-27 35.757867092304664 40.0 36.0 41.0 27.0 41.0 28-29 35.65542986435632 40.0 36.0 41.0 26.5 41.0 30-31 35.513272299136716 40.0 35.0 41.0 25.5 41.0 32-33 35.37989840827037 40.0 35.0 41.0 25.0 41.0 34-35 35.325807897868714 40.0 35.0 41.0 25.0 41.0 36-37 35.19600252398422 40.0 35.0 41.0 24.5 41.0 38-39 35.050749575089895 40.0 35.0 41.0 24.0 41.0 40-41 34.91734497605218 39.0 35.0 41.0 24.0 41.0 42-43 34.73707151864873 39.0 34.5 41.0 23.0 41.0 44-45 34.583307174520684 39.0 34.0 41.0 22.5 41.0 46-47 34.382107235664066 39.0 34.0 41.0 21.5 41.0 48-49 34.260288261016726 39.0 34.0 41.0 20.5 41.0 50-51 34.06303716553115 38.5 33.0 40.5 19.5 41.0 52-53 33.86654774642966 38.0 33.0 40.0 18.5 41.0 54-55 33.62484657287709 38.0 33.0 40.0 17.5 41.0 56-57 33.358151563705576 38.0 33.0 40.0 14.5 41.0 58-59 33.0915159236654 37.5 32.0 40.0 13.0 41.0 60-61 32.82585088930864 37.0 32.0 40.0 10.5 41.0 62-63 32.51415316871934 36.5 32.0 40.0 8.0 41.0 64-65 32.22811349012243 36.0 31.0 39.0 7.5 41.0 66-67 31.879793886753724 35.5 31.0 39.0 7.0 41.0 68-69 31.548837024683003 35.0 31.0 39.0 6.5 40.0 70-71 31.207653659140206 35.0 31.0 38.0 2.0 40.0 72-73 31.27134888941055 35.0 31.0 37.5 2.0 40.0 74-75 31.258668120641715 35.0 31.0 37.0 2.0 39.0 76-77 30.988098991316186 35.0 31.0 37.0 2.0 39.0 78-79 30.699042291748555 35.0 31.0 36.0 2.0 39.0 80-81 30.43075841904325 35.0 31.0 36.0 2.0 37.5 82-83 30.19074016701606 35.0 31.0 35.5 2.0 37.0 84-85 29.96138356462273 35.0 31.0 35.0 2.0 37.0 86-87 29.769066134937617 35.0 31.0 35.0 2.0 36.0 88-89 29.58291615713849 35.0 31.0 35.0 2.0 36.0 90-91 29.423611262756403 35.0 30.0 35.0 2.0 36.0 92-93 29.26965812024137 35.0 30.0 35.0 2.0 35.0 94-95 29.165766234841534 34.5 30.0 35.0 2.0 35.0 96-97 29.077906062111484 34.0 30.0 35.0 2.0 35.0 98-99 28.95824791912332 34.0 30.0 35.0 2.0 35.0 100-101 28.846644756955058 34.0 30.0 35.0 2.0 35.0 102-103 27.500728352331457 32.5 26.5 34.5 2.0 35.0 104-105 28.519398693060225 34.0 29.0 35.0 2.0 35.0 106-107 28.6742451021604 34.0 29.5 35.0 2.0 35.0 108-109 28.61553437677425 34.0 29.5 35.0 2.0 35.0 110-111 28.52954228446958 34.0 29.0 35.0 2.0 35.0 112-113 28.425673259597325 34.0 29.0 35.0 2.0 35.0 114-115 28.323987130774043 34.0 29.0 35.0 2.0 35.0 116-117 28.125064714627825 34.0 29.0 35.0 2.0 35.0 118-119 27.94619120863723 34.0 29.0 35.0 2.0 35.0 120-121 27.787625926249433 34.0 29.0 35.0 2.0 35.0 122-123 27.516172629056207 34.0 29.0 35.0 2.0 35.0 124-125 26.21895517607838 33.0 23.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 166075.0 3 23697.0 4 15696.0 5 14477.0 6 18930.0 7 20589.0 8 20226.0 9 20932.0 10 22837.0 11 24273.0 12 24179.0 13 23712.0 14 23805.0 15 21570.0 16 18376.0 17 16982.0 18 16251.0 19 16199.0 20 16834.0 21 18160.0 22 21621.0 23 27443.0 24 36823.0 25 46789.0 26 53290.0 27 59345.0 28 69661.0 29 82010.0 30 97477.0 31 119787.0 32 150455.0 33 193477.0 34 263383.0 35 390670.0 36 702382.0 37 1131974.0 38 405211.0 39 626.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.21095611806328 18.20639313853289 12.089252663427967 25.493398079975865 2 16.244587901411077 20.094348090143704 38.884120152119664 24.776943856325552 3 19.295809052366682 24.006745729914684 28.913965739056646 27.78347947866199 4 13.046594214569346 16.09476255031322 36.160638724155426 34.69800451096201 5 14.049447990426305 37.44017579725349 34.28349494564667 14.226881266673534 6 33.164608271004575 36.14117705998021 16.873477836618 13.820736832397214 7 28.72733284435074 32.06223666044166 20.998212200077834 18.212218295129766 8 25.94481316170733 35.71638858612558 19.787711753746 18.55108649842109 9 26.317059814035353 16.17179699409909 19.229067592353292 38.28207559951226 10-11 25.219305060884267 26.12565631576605 27.634264762985243 21.020773860364443 12-13 25.601252707744358 23.6357527088257 27.460155992027275 23.30283859140267 14-15 23.058677941631434 25.216510602377877 24.678589063184013 27.04622239280668 16-17 23.32552425042365 27.768073652301474 25.636480854353582 23.26992124292129 18-19 23.264324333799166 27.11673746721097 26.896186240526383 22.722751958463476 20-21 24.19572903067054 26.342105715419628 26.48675219652892 22.975413057380916 22-23 23.70486205987297 26.216983039902985 26.22006712843021 23.858087771793837 24-25 23.404841798673715 26.3577412648185 26.489202030534496 23.74821490597329 26-27 23.476765762973574 26.51054894150912 26.426367294451264 23.586318001066044 28-29 23.425252167594778 26.61045756141988 26.478567731994584 23.485722538990757 30-31 23.693437648452946 26.579380032035676 26.258476969207372 23.468705350304003 32-33 23.272021580522896 26.60531317937102 26.335715993034135 23.786949247071945 34-35 23.585031611053438 26.5869634324299 26.39850471357359 23.429500242943067 36-37 23.68751877306476 26.45428295628236 26.22363960086316 23.634558669789715 38-39 23.56724724883314 26.616490145149523 26.25669787590308 23.559564730114253 40-41 23.66475240458899 26.606042360375632 26.330472847963275 23.3987323870721 42-43 23.52830837456579 26.547194510387666 26.311836305056012 23.612660809990533 44-45 23.557598303382196 26.608180212605316 26.288539293924195 23.545682190088296 46-47 23.48125573456229 26.59726124930207 26.219676385746805 23.701806630388838 48-49 23.444791055463174 26.596177122732012 26.291703898395273 23.667327923409538 50-51 23.358106002685382 26.750078583480697 26.21155697262518 23.680258441208746 52-53 23.43307266198996 26.69454677431305 26.135905168180308 23.73647539551669 54-55 23.441449412298144 26.59891358494547 26.202362643747296 23.757274359009088 56-57 23.43582585513058 26.656204808402993 26.066689566208474 23.841279770257955 58-59 23.316826939599892 26.50570106729005 26.242753464032532 23.934718529077525 60-61 23.46621937065196 26.427537203408985 26.32164659441734 23.78459683152171 62-63 23.279439608752202 26.472548046452538 26.346996953747194 23.901015391048066 64-65 23.278420294309736 26.319214230269694 26.389792486044524 24.01257298937605 66-67 23.347447042295038 26.45592647745837 26.218597661422343 23.978028818824246 68-69 23.538287430116352 26.27730987619083 26.16811134221671 24.01629135147611 70-71 23.261368072096513 26.132994807166405 26.36723564402858 24.238401476708496 72-73 23.32280859233998 26.09824720160846 26.442006348073434 24.13693785797813 74-75 23.259229569856313 26.31455742868123 26.347559703675987 24.07865329778647 76-77 23.195916709412444 26.08784920132072 26.502704222857876 24.21352986640897 78-79 23.300369920843426 26.083192073758838 26.49147634321781 24.124961662179935 80-81 23.23713084778476 26.0944021385664 26.463689493632497 24.20477752001634 82-83 23.19143175576102 26.10938648566123 26.52185882618313 24.177322932394617 84-85 23.235187437980937 26.176081727965027 26.366189110639105 24.222541723414924 86-87 23.174808596333662 25.98392113609041 26.498898168560864 24.342372099015066 88-89 23.296474943483357 25.818519705003908 26.512401227462334 24.372604124050397 90-91 23.258533085740382 25.930228998442356 26.481839143562375 24.329398772254887 92-93 23.236995877299474 25.867464987543592 26.560294438291727 24.33524469686521 94-95 23.103453573840905 25.8220184039619 26.655448948666137 24.419079073531062 96-97 23.19198649318953 25.77752975894139 26.561383580968435 24.469100166900645 98-99 23.133271528661965 25.81642647089447 26.457398643885497 24.592903356558068 100-101 23.0826248548887 25.86399398640113 26.55728519601888 24.496095962691292 102-103 23.01844806660903 25.90890233059232 26.549451664827465 24.523197937971183 104-105 22.880763278867597 26.01195894588321 26.44632697646898 24.66095079878021 106-107 22.838741541169956 26.0139984284343 26.467578918259804 24.679681112135935 108-109 22.870635859568207 26.04342438934239 26.50651864280405 24.579421108285352 110-111 22.854483344767164 26.17380776684267 26.349878931869075 24.621829956521086 112-113 22.82915925970606 26.266595954376914 26.40659035505612 24.49765443086091 114-115 22.803759782113005 26.32035265626314 26.32745440116414 24.548433160459716 116-117 22.72817909700329 26.326235161558337 26.33051455106245 24.615071190375925 118-119 22.81520477246865 26.268994328943577 26.28724877798186 24.628552120605914 120-121 22.793596476892354 26.342618030615967 26.31303953162407 24.550745960867612 122-123 22.816309074223117 26.419793438240873 26.179083163687082 24.584814323848924 124-125 22.86943292132367 26.42498104077199 26.034335011124 24.671251026780343 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1513.0 1 1194.0 2 671.0 3 437.5 4 366.5 5 318.0 6 313.0 7 326.0 8 375.5 9 420.0 10 429.0 11 437.5 12 490.5 13 586.5 14 679.5 15 763.5 16 932.5 17 1161.5 18 1390.5 19 1717.5 20 2174.5 21 2743.0 22 3578.5 23 4889.5 24 6499.5 25 8814.5 26 12570.5 27 17271.5 28 21874.5 29 27077.5 30 33323.0 31 40687.5 32 49506.5 33 57796.0 34 65433.0 35 73610.5 36 83733.5 37 94159.0 38 102132.0 39 109348.0 40 119075.5 41 128602.5 42 136259.0 43 146422.5 44 156380.5 45 164719.5 46 170964.0 47 176853.5 48 184658.0 49 190466.5 50 191936.5 51 186689.5 52 178156.5 53 172218.0 54 166325.0 55 157484.0 56 144706.5 57 130034.0 58 117691.0 59 105643.0 60 91024.0 61 76264.5 62 62500.5 63 47783.0 64 35262.0 65 27122.5 66 20996.5 67 16169.0 68 12633.0 69 10178.5 70 8497.5 71 6903.0 72 5536.5 73 4611.5 74 3736.5 75 2976.0 76 2297.0 77 1577.5 78 1065.5 79 741.5 80 493.0 81 388.0 82 286.0 83 181.0 84 148.5 85 116.0 86 79.0 87 64.5 88 54.0 89 44.0 90 36.0 91 27.0 92 21.5 93 20.0 94 16.5 95 14.5 96 14.0 97 10.0 98 10.5 99 12.0 100 21.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.16889494256889548 2 0.14835458793728437 3 0.17446790700382872 4 0.1472399950502977 5 0.17132884948537655 6 0.11052667016057417 7 0.10902538178218397 8 0.09715155551673435 9 0.10302022826862325 10-11 0.0909303074638599 12-13 0.07960240424509761 14-15 0.07922708215050006 16-17 0.07906785459521626 18-19 0.07658845409151126 20-21 0.07050368680030863 22-23 0.06154145011719148 24-25 0.06592020788749618 26-27 0.07603115764801795 28-29 0.07195948159147487 30-31 0.06817214045508145 32-33 0.07674768164679506 34-35 0.07323330203374533 36-37 0.07493931155464326 38-39 0.07127707778311569 40-41 0.07555347498216651 42-43 0.07609939802885386 44-45 0.068536089152873 46-47 0.06612492903000393 48-49 0.05845925958276921 50-51 0.06385024966880669 52-53 0.06570411334818244 54-55 0.06750111004352827 56-57 0.07103823645018997 58-59 0.05852749996360514 60-61 0.06849059556564907 62-63 0.06354316795504505 64-65 0.05731054650536461 66-67 0.06236033468722249 68-69 0.0648283617941215 70-71 0.06071119215035448 72-73 0.055729644349332516 74-75 0.058857328470978736 76-77 0.0682972478199473 78-79 0.06179166484692318 80-81 0.05974445342184566 82-83 0.06456677366758382 84-85 0.06636377036292965 86-87 0.05982406719948757 88-89 0.05928951754960621 90-91 0.06192814560859501 92-93 0.05691247761715508 94-95 0.06543115182483877 96-97 0.05214702435544686 98-99 0.05171483527681938 100-101 0.04965625045493588 102-103 0.04788200055320202 104-105 0.04603951027063225 106-107 0.05724230612452869 108-109 0.057276426314946643 110-111 0.06437342592188205 112-113 0.06446441309632994 114-115 0.06681870623516908 116-117 0.06992364356320332 118-119 0.06311097887641758 120-121 0.06437342592188205 122-123 0.06296312471793976 124-125 0.07380197187404464 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 4396224.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.49788606482046 #Duplication Level Percentage of deduplicated Percentage of total 1 68.71055689371627 32.636062027880996 2 14.510732583295216 13.784582459168682 3 6.335122501857499 9.027147803997236 4 3.280176311585962 6.232057628809322 5 1.9249851492359102 4.571636264743935 6 1.1984259528684673 3.415361961988222 7 0.8420892931447784 2.799822291153712 8 0.5934407605757308 2.2549745305637168 9 0.43177229530226324 1.8457444159391625 >10 2.032164934625522 16.649950799263106 >50 0.10344436382978076 3.340978672873276 >100 0.035791121268853504 2.848180739624183 >500 9.613620643791388E-4 0.3132458702125885 >1k 3.3647662939970336E-4 0.2802545337817951 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 2.2746793611972456E-5 0.0 3 0.0 0.0 0.0 2.2746793611972456E-5 0.0 4 0.0 0.0 0.0 2.2746793611972456E-5 0.0 5 0.0 0.0 0.0 2.2746793611972456E-5 0.0 6 0.0 0.0 0.0 2.2746793611972456E-5 0.0 7 0.0 0.0 0.0 2.2746793611972456E-5 0.0 8 0.0 0.0 0.0 2.2746793611972456E-5 0.0 9 0.0 0.0 0.0 2.2746793611972456E-5 0.0 10-11 0.0 0.0 0.0 2.2746793611972456E-5 0.0 12-13 0.0 0.0 0.0 2.2746793611972456E-5 0.0 14-15 0.0 0.0 0.0 2.2746793611972456E-5 0.0 16-17 0.0 0.0 0.0 2.2746793611972456E-5 0.0 18-19 0.0 0.0 0.0 6.824038083591736E-5 0.0 20-21 0.0 0.0 0.0 1.1373396805986228E-4 0.0 22-23 0.0 0.0 0.0 1.7060095208979342E-4 0.0 24-25 0.0 0.0 0.0 3.639486977915593E-4 0.0 26-27 0.0 0.0 0.0 7.733909828070635E-4 0.0 28-29 0.0 0.0 0.0 0.002627254662182819 0.0 30-31 0.0 0.0 0.0 0.009747001062730198 0.0 32-33 0.0 0.0 0.0 0.02888842788720502 0.0 34-35 2.2746793611972456E-5 0.0 0.0 0.061973639195818955 0.0 36-37 2.2746793611972456E-5 0.0 0.0 0.12186594677614243 0.0 38-39 2.2746793611972456E-5 0.0 0.0 0.2218494780975674 0.0 40-41 2.2746793611972456E-5 0.0 0.0 0.341884307987946 0.0 42-43 2.2746793611972456E-5 0.0 0.0 0.4558002503967041 0.0 44-45 2.2746793611972456E-5 0.0 0.0 0.5949082667307217 0.0 46-47 2.2746793611972456E-5 0.0 0.0 0.7674313228807268 0.0 48-49 2.2746793611972456E-5 0.0 0.0 0.9503041701241792 0.0 50-51 2.2746793611972456E-5 0.0 0.0 1.1355426839032772 0.0 52-53 2.2746793611972456E-5 0.0 0.0 1.324693646183634 0.0 54-55 2.2746793611972456E-5 0.0 0.0 1.5388774548339665 0.0 56-57 2.2746793611972456E-5 0.0 0.0 1.794437681064477 0.0 58-59 2.2746793611972456E-5 0.0 0.0 2.065306499395845 0.0 60-61 2.2746793611972456E-5 0.0 0.0 2.351154081320697 0.0 62-63 2.2746793611972456E-5 0.0 0.0 2.641835356888093 0.0 64-65 2.2746793611972456E-5 0.0 0.0 2.9553999068291334 0.0 66-67 2.2746793611972456E-5 0.0 0.0 3.3243301524217146 0.0 68-69 2.2746793611972456E-5 0.0 0.0 3.73246449680453 0.0 70-71 2.2746793611972456E-5 0.0 0.0 4.176117959412442 0.0 72-73 2.2746793611972456E-5 0.0 0.0 4.619270992560889 0.0 74-75 2.2746793611972456E-5 0.0 0.0 5.07060149801284 0.0 76-77 2.2746793611972456E-5 0.0 0.0 5.581733323870667 0.0 78-79 3.412019041795868E-5 0.0 0.0 6.145467109956181 0.0 80-81 4.549358722394491E-5 0.0 0.0 6.732891681588564 0.0 82-83 4.549358722394491E-5 0.0 0.0 7.340606393122825 0.0 84-85 4.549358722394491E-5 0.0 0.0 7.95678291188074 0.0 86-87 4.549358722394491E-5 0.0 0.0 8.611754087143876 0.0 88-89 4.549358722394491E-5 0.0 0.0 9.331690104962805 0.0 90-91 4.549358722394491E-5 0.0 0.0 10.085723566406081 0.0 92-93 6.824038083591736E-5 0.0 0.0 10.850834716338385 0.0 94-95 6.824038083591736E-5 0.0 0.0 11.62031325064419 0.0 96-97 6.824038083591736E-5 0.0 0.0 12.417167551062002 0.0 98-99 6.824038083591736E-5 0.0 0.0 13.273732184711243 0.0 100-101 6.824038083591736E-5 0.0 0.0 14.192463805302005 0.0 102-103 6.824038083591736E-5 0.0 0.0 15.117769249246626 0.0 104-105 6.824038083591736E-5 0.0 0.0 16.03910537770596 0.0 106-107 6.824038083591736E-5 0.0 0.0 16.969608463990916 0.0 108-109 6.824038083591736E-5 0.0 0.0 17.944399557438384 0.0 110-111 6.824038083591736E-5 2.2746793611972456E-5 0.0 18.96353552503239 0.0 112-113 6.824038083591736E-5 2.2746793611972456E-5 0.0 20.01582494431585 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 10980 0.0 30.069122 1 GTACATG 17015 0.0 27.740007 1 TACATGG 17020 0.0 26.563042 2 TCAACGC 12000 0.0 26.505486 4 CAACGCA 12100 0.0 26.335657 5 CATGGGG 10455 0.0 26.320475 4 AACGCAG 12155 0.0 26.052858 6 ATCAACG 12415 0.0 25.668625 3 TATCAAC 12755 0.0 25.311296 2 ACATGGG 17855 0.0 24.987194 3 ACGCAGA 13765 0.0 22.699564 7 GGTATCA 8345 0.0 21.924282 1 CGCAGAG 14145 0.0 21.582628 8 GTATAGG 1015 0.0 20.550167 1 GCAGAGT 15950 0.0 18.206617 9 GTATAAT 1870 0.0 17.846775 1 GTATACG 305 3.4967343E-6 17.585554 1 ATGGGGG 5260 0.0 17.551802 5 GTATTAC 1225 0.0 17.513775 1 GTATAGA 1630 0.0 16.818357 1 >>END_MODULE