FastQCFastQC Report
Mon 15 Aug 2016
SRR2920928_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR2920928_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4504868
Sequences flagged as poor quality0
Sequence length125
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTACATG180250.031.8682171
ACATGGG180000.030.7428863
GTATCAA89950.030.2740861
TACATGG188050.030.1237182
CATGGGG125950.029.983874
GGTATCA71300.027.9969841
TCAACGC99450.025.9346084
CAACGCA101950.025.4154975
AACGCAG106050.024.7522966
ATCAACG107550.024.0370253
TATCAAC111350.023.6981752
ATGGGGA65200.022.2914775
ACGCAGA119850.021.5521727
CGCAGAG126250.020.2699328
GTATAGA12500.019.0680371
ATGGGGG65000.018.5112025
GTATAGG11600.018.4927081
ATGGGGC56600.017.4698125
TAGACAG21500.017.454155
GTATAAG17200.017.3219811
Produced by FastQC (version 0.11.5)