##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920921_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2457534 Sequences flagged as poor quality 0 Sequence length 125 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.75894982531269 31.0 30.0 34.0 25.0 34.0 2 29.85269623940096 31.0 30.0 34.0 25.0 34.0 3 29.92137891072921 31.0 30.0 34.0 25.0 34.0 4 33.30455977414758 37.0 35.0 37.0 27.0 37.0 5 33.393394760764245 37.0 35.0 37.0 27.0 37.0 6 33.34512971132851 37.0 35.0 37.0 27.0 37.0 7 33.30401573284439 37.0 35.0 37.0 27.0 37.0 8 33.21416550086387 37.0 35.0 37.0 26.0 37.0 9 34.60917244685119 39.0 35.0 39.0 26.0 39.0 10-11 34.63560382074063 39.0 35.0 39.0 27.0 39.0 12-13 34.587117004281524 39.0 35.0 39.0 27.0 39.0 14-15 35.74463364494652 40.0 36.0 41.0 26.5 41.0 16-17 35.737979413509635 40.0 36.0 41.0 26.5 41.0 18-19 35.725617834788856 40.0 36.0 41.0 26.0 41.0 20-21 35.756372648354 40.0 36.0 41.0 26.0 41.0 22-23 35.684910768274214 40.0 36.0 41.0 26.0 41.0 24-25 35.692715746760776 40.0 36.0 41.0 26.0 41.0 26-27 35.63694459568006 40.0 36.0 41.0 26.0 41.0 28-29 35.529685245453365 40.0 35.0 41.0 26.0 41.0 30-31 35.377445642664554 40.0 35.0 41.0 25.0 41.0 32-33 35.244244230191725 40.0 35.0 41.0 25.0 41.0 34-35 35.172742879650905 40.0 35.0 41.0 24.5 41.0 36-37 35.028171736382895 40.0 35.0 41.0 24.0 41.0 38-39 34.89144666971037 39.0 35.0 41.0 24.0 41.0 40-41 34.76305719473261 39.0 34.5 41.0 23.0 41.0 42-43 34.571174600229334 39.0 34.0 41.0 22.0 41.0 44-45 34.41073409360766 39.0 34.0 41.0 21.0 41.0 46-47 34.21514534488638 39.0 33.0 41.0 19.5 41.0 48-49 34.09146668977927 39.0 33.0 41.0 18.5 41.0 50-51 33.89792979466408 38.5 33.0 40.5 17.5 41.0 52-53 33.7174981098939 38.0 33.0 40.0 15.5 41.0 54-55 33.48972506585871 38.0 33.0 40.0 13.5 41.0 56-57 33.22960435135384 38.0 32.5 40.0 11.0 41.0 58-59 32.97566910569701 37.5 32.0 40.0 8.5 41.0 60-61 32.71766494380139 37.0 32.0 40.0 8.0 41.0 62-63 32.40816505488836 37.0 31.0 40.0 7.0 41.0 64-65 32.131197777935114 36.0 31.0 39.5 4.0 41.0 66-67 31.782177784722407 36.0 31.0 39.0 2.0 41.0 68-69 31.457595093292706 35.0 31.0 39.0 2.0 40.0 70-71 31.114184381579257 35.0 30.0 38.0 2.0 40.0 72-73 31.171147174362595 35.0 31.0 38.0 2.0 40.0 74-75 31.1616014264706 35.0 31.0 37.0 2.0 39.5 76-77 30.893873289240354 35.0 31.0 37.0 2.0 39.0 78-79 30.593810502723464 35.0 31.0 36.5 2.0 39.0 80-81 30.31276372982022 35.0 31.0 36.0 2.0 38.0 82-83 30.066026146535513 35.0 31.0 36.0 2.0 37.0 84-85 29.817635076462828 35.0 31.0 35.0 2.0 37.0 86-87 29.613042790048887 35.0 30.5 35.0 2.0 36.5 88-89 29.409201052762647 35.0 30.0 35.0 2.0 36.0 90-91 29.23576540548371 35.0 30.0 35.0 2.0 36.0 92-93 29.060365594128097 34.5 30.0 35.0 2.0 35.5 94-95 28.9424874691459 34.0 30.0 35.0 2.0 35.0 96-97 28.83764436219397 34.0 30.0 35.0 2.0 35.0 98-99 28.705606514497866 34.0 29.0 35.0 2.0 35.0 100-101 28.580755749462675 34.0 29.0 35.0 2.0 35.0 102-103 27.230053785624126 32.5 26.0 34.5 2.0 35.0 104-105 28.233824842301267 34.0 29.0 35.0 2.0 35.0 106-107 28.376303237310246 34.0 29.0 35.0 2.0 35.0 108-109 28.304379308689118 34.0 29.0 35.0 2.0 35.0 110-111 28.198406817565903 34.0 29.0 35.0 2.0 35.0 112-113 28.07965179728948 34.0 29.0 35.0 2.0 35.0 114-115 27.95923515198569 34.0 29.0 35.0 2.0 35.0 116-117 27.742911796947674 34.0 29.0 35.0 2.0 35.0 118-119 27.537472319813276 34.0 28.0 35.0 2.0 35.0 120-121 27.35396519437778 34.0 27.5 35.0 2.0 35.0 122-123 27.060047999335918 34.0 27.0 35.0 2.0 35.0 124-125 25.794680765352584 33.0 22.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 94730.0 3 13569.0 4 9250.0 5 8980.0 6 12227.0 7 12321.0 8 11340.0 9 12115.0 10 13144.0 11 14410.0 12 15127.0 13 14772.0 14 14877.0 15 13376.0 16 10798.0 17 9706.0 18 9353.0 19 9450.0 20 9885.0 21 10481.0 22 12451.0 23 16233.0 24 21854.0 25 27883.0 26 30686.0 27 34029.0 28 39121.0 29 46899.0 30 55221.0 31 67276.0 32 83925.0 33 107578.0 34 146008.0 35 210449.0 36 371662.0 37 618229.0 38 247539.0 39 580.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.355053227802934 19.084161432331058 12.48728862434283 25.07349671552318 2 15.737839864380257 20.840328943078827 39.15408815283302 24.267743039707895 3 18.77793941953264 25.240461924942696 29.47838808070276 26.5032105748219 4 12.70387906601841 16.86986825821211 36.74279238473867 33.68346029103081 5 13.399444351147901 38.381835760764474 34.57043191589616 13.64828797219147 6 32.149809707193896 37.18325097427554 17.16065128491943 13.50628803361113 7 27.258566534049226 33.27893940807298 21.48948381848614 17.973010239391655 8 25.427000308324054 36.34203849855552 20.1625604989229 18.06840069419752 9 25.906410738928614 16.58288080004301 19.47897166188472 38.03173679914365 10-11 24.52989869164588 26.97614417349692 28.00289161533371 20.491065519523495 12-13 24.8506556004837 24.675019786007734 27.74990893447945 22.72441567902911 14-15 22.446185957272917 26.18341619987006 25.121663034574677 26.248734808282347 16-17 22.56648510810543 28.71687553943783 26.058122765513364 22.65851658694338 18-19 22.579648148355524 28.058117315779775 27.39332314624311 21.96891138962159 20-21 23.442258715954583 27.22114554378301 27.14292432922051 22.193671411041898 22-23 23.055107229174673 27.04020849755379 26.807069731536192 23.09761454173534 24-25 22.751076403090334 27.079490248395704 27.15512195638361 23.014311392130352 26-27 22.617184620878856 27.282233838643588 27.070870079190655 23.029711461286897 28-29 22.6685128811533 27.551330789189503 27.059298747961996 22.720857581695196 30-31 23.053679114292578 27.371482436102596 26.93217122916743 22.6426672204374 32-33 22.613495458552805 27.41486695320915 26.892799042234135 23.07883854600391 34-35 22.802895139063224 27.510336364763578 27.030548241153546 22.656220255019655 36-37 22.949226862477133 27.26551772442 26.97405391846262 22.811201494640244 38-39 22.73814398063042 27.478678619005258 26.991120443177696 22.79205695718662 40-41 22.840436606839447 27.4508945578072 27.04742680377023 22.66124203158312 42-43 22.730862710436732 27.456752086424363 26.890558340576696 22.921826862562213 44-45 22.825026716672163 27.400097766019975 26.948321842806006 22.82655367450186 46-47 22.65435359960748 27.43301665053223 26.904417984651417 23.008211765208866 48-49 22.551526349261152 27.50307191580874 26.99519812126596 22.95020361366414 50-51 22.507391692842717 27.557460576111275 26.937093808079222 22.998053922966783 52-53 22.662661937160657 27.48957166726488 26.729513204674642 23.11825319089982 54-55 22.611860547831807 27.33236518130048 26.777085946532843 23.27868832433487 56-57 22.575773215921423 27.504129512254366 26.66413795757266 23.255959314251555 58-59 22.62073267230388 27.23685766790161 26.91525266390852 23.227156995885988 60-61 22.7087920119778 27.235749184507203 26.943877889650008 23.111580913864984 62-63 22.545246151277887 27.233297095695864 27.037003106664876 23.184453646361376 64-65 22.563481516586133 27.229364842835203 26.88966625789651 23.31748738268215 66-67 22.567861684860226 27.478890337243623 26.67328571338415 23.279962264512008 68-69 22.809987752283416 27.16688491055258 26.79961628164536 23.22351105551864 70-71 22.54722254907509 27.11140055120287 26.950412506417738 23.390964393304298 72-73 22.68982386599126 27.193410303241027 26.86752045234138 23.24924537842633 74-75 22.641372694952878 27.284893482923557 26.7548120377895 23.31892178433407 76-77 22.599768393346928 27.06493537164561 26.96358710169193 23.371709133315527 78-79 22.717274269098827 27.107842009592193 26.88856809512632 23.28631562618266 80-81 22.71000124791412 27.124502539291484 26.92923349776078 23.23626271503362 82-83 22.66273126555122 27.092215503520567 27.024524052757393 23.22052917817082 84-85 22.744706273479974 27.10601337690372 26.745521436821072 23.403758912795233 86-87 22.6251754558289 27.100395850743197 26.89944739684113 23.374981296586768 88-89 22.74160057326189 26.82977623243164 26.954607266745924 23.474015927560544 90-91 22.82993527992334 26.927855569039327 26.85012877444714 23.392080376590187 92-93 22.951117683210214 26.85888156562166 26.886078330346642 23.303922420821486 94-95 22.74632737432738 26.928109392015266 26.887494149471014 23.43806908418634 96-97 22.68854107507445 26.87720733869507 26.904504548517178 23.529747037713303 98-99 22.601147503408598 26.943796108682648 26.796846787979756 23.658209599929 100-101 22.575339643891702 27.192640165252683 26.73317973203841 23.498840458817206 102-103 22.598773571578906 27.18186077924573 26.751210409049662 23.468155240125697 104-105 22.51712285199778 27.282027503628726 26.614414887889566 23.586434756483925 106-107 22.407551262696586 27.44072890660752 26.65937076067963 23.492349070016267 108-109 22.451862779684646 27.44267880854896 26.629648501138863 23.475809910627532 110-111 22.417600449184665 27.748003821652677 26.455661438868926 23.378734290293732 112-113 22.432906226594515 27.900956893089084 26.374158369541963 23.291978510774438 114-115 22.508478951698425 27.95219090737151 26.294797357177075 23.244532783752987 116-117 22.418768910215757 27.918741730200374 26.317278936383904 23.345210423199966 118-119 22.51919423015731 27.872345060273535 26.24069553420251 23.367765175366646 120-121 22.54809669420478 28.0802446264032 26.235224899124184 23.136433780267833 122-123 22.628431924010965 28.095874718576276 26.057836634075564 23.217856723337196 124-125 22.747319220032345 28.220168146956848 25.830529221300786 23.20198341171002 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 2152.0 1 1564.0 2 805.5 3 562.5 4 446.5 5 391.0 6 381.5 7 402.0 8 458.0 9 532.5 10 562.5 11 580.0 12 660.5 13 738.0 14 814.5 15 978.5 16 1138.5 17 1312.5 18 1570.0 19 1909.0 20 2439.0 21 3224.5 22 4109.5 23 5167.5 24 6543.5 25 8501.0 26 11306.0 27 14751.0 28 18012.5 29 21570.5 30 25832.0 31 30449.0 32 35767.0 33 40380.5 34 44741.0 35 49575.0 36 55509.5 37 60787.5 38 64551.0 39 68573.0 40 72951.5 41 77305.5 42 80213.5 43 83381.0 44 87036.0 45 90386.0 46 93368.5 47 95037.5 48 96509.5 49 98518.5 50 100008.5 51 98034.5 52 92673.5 53 88030.5 54 84081.0 55 78829.0 56 71936.5 57 64809.0 58 58875.5 59 51724.5 60 43506.0 61 36468.0 62 29903.0 63 22858.0 64 16731.0 65 12875.5 66 10094.0 67 7756.5 68 5831.5 69 4390.5 70 3418.5 71 2618.0 72 1992.0 73 1649.0 74 1372.0 75 1028.5 76 698.5 77 482.5 78 356.0 79 273.0 80 205.0 81 131.5 82 91.5 83 72.0 84 55.0 85 43.0 86 37.5 87 30.0 88 21.5 89 16.0 90 16.0 91 19.5 92 14.0 93 10.5 94 9.5 95 8.5 96 11.5 97 10.5 98 11.0 99 13.0 100 13.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.163700685321139 2 0.1470579857694746 3 0.17232721907407994 4 0.14514549951292638 5 0.17033335042363607 6 0.10713992156364877 7 0.10591918565521373 8 0.09460703290371567 9 0.10034449167336038 10-11 0.08785229421037512 12-13 0.0766825606481945 14-15 0.07643841346650748 16-17 0.07538044234586377 18-19 0.07371210327100255 20-21 0.06830017407694054 22-23 0.06046711866448236 24-25 0.0632137744584612 26-27 0.07385452246031998 28-29 0.06909365241742332 30-31 0.06689632778224024 32-33 0.07401728724811131 34-35 0.07171823462055865 36-37 0.07430212562674617 38-39 0.07017196913654095 40-41 0.07420039763437658 42-43 0.07477007439164626 44-45 0.06797464450135787 46-47 0.06537040789669644 48-49 0.0574559700903426 50-51 0.0637834512157309 52-53 0.06528902550280077 54-55 0.06724220295629683 56-57 0.07061957230296713 58-59 0.05759838927966002 60-61 0.0674253133425621 62-63 0.062013384148500085 64-65 0.05639799896969889 66-67 0.06065022905074762 68-69 0.06372241442030914 70-71 0.059042926771308145 72-73 0.054363439122307164 74-75 0.05704905812086425 76-77 0.06697771017613592 78-79 0.059958478702634425 80-81 0.05841221321861671 82-83 0.06254236970882193 84-85 0.06447520156384408 86-87 0.05824944843082537 88-89 0.05753735248423827 90-91 0.06085368503548679 92-93 0.05531968225058127 94-95 0.06345792164014821 96-97 0.050416393018367194 98-99 0.050660540200054206 100-101 0.04779181081523186 102-103 0.04610312614189671 104-105 0.04453651505940508 106-107 0.05542141024295086 108-109 0.055034843871946425 110-111 0.062196494534765334 112-113 0.06154543538359999 114-115 0.0650855695180616 116-117 0.06858501245557538 118-119 0.061952347353078335 120-121 0.06282720808745677 122-123 0.06085368503548679 124-125 0.07184030821140217 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 2457534.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.55263504638642 #Duplication Level Percentage of deduplicated Percentage of total 1 70.71549670551825 37.87001187194561 2 14.467860460081965 15.495841022416279 3 6.044620500083946 9.711160669047041 4 3.0244107560123497 6.4786066178838 5 1.7524431102915892 4.6923973162499895 6 1.0920773564608368 3.509017206778179 7 0.6775506102791388 2.5399234390414582 8 0.4973418427347185 2.1307172957815754 9 0.34463323428898773 1.6610416038660554 >10 1.306566227421418 11.291352017482827 >50 0.05332660218339369 1.9156959148433756 >100 0.022453857414011274 2.038148681430618 >500 8.378818452362319E-4 0.2974116926036872 >1k 3.8085538419603294E-4 0.3686746506294688 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.0691196947834696E-5 2 0.0 0.0 0.0 4.0691196947834696E-5 4.0691196947834696E-5 3 0.0 0.0 0.0 4.0691196947834696E-5 4.0691196947834696E-5 4 0.0 0.0 0.0 4.0691196947834696E-5 4.0691196947834696E-5 5 0.0 0.0 0.0 4.0691196947834696E-5 4.0691196947834696E-5 6 0.0 0.0 0.0 4.0691196947834696E-5 1.220735908435041E-4 7 0.0 0.0 0.0 4.0691196947834696E-5 1.220735908435041E-4 8 0.0 0.0 0.0 4.0691196947834696E-5 1.220735908435041E-4 9 0.0 0.0 0.0 8.138239389566939E-5 1.220735908435041E-4 10-11 0.0 0.0 0.0 1.220735908435041E-4 1.220735908435041E-4 12-13 0.0 0.0 0.0 1.220735908435041E-4 2.034559847391735E-4 14-15 0.0 0.0 0.0 1.220735908435041E-4 2.441471816870082E-4 16-17 0.0 0.0 0.0 1.627647877913388E-4 3.051839771087602E-4 18-19 0.0 0.0 0.0 2.441471816870082E-4 3.2552957558267757E-4 20-21 0.0 0.0 0.0 3.865663710044296E-4 3.6622077253051227E-4 22-23 0.0 0.0 0.0 6.103679542175204E-4 3.6622077253051227E-4 24-25 0.0 0.0 0.0 9.562431282741155E-4 3.865663710044296E-4 26-27 0.0 0.0 0.0 0.0017497214687568921 4.882943633740164E-4 28-29 0.0 0.0 0.0 0.004170847687153057 4.882943633740164E-4 30-31 0.0 0.0 0.0 0.01597129480202512 4.882943633740164E-4 32-33 0.0 0.0 0.0 0.04722213405796217 4.882943633740164E-4 34-35 0.0 0.0 0.0 0.09798440225038596 5.289855603218511E-4 36-37 0.0 0.0 0.0 0.18343591584083885 5.289855603218511E-4 38-39 0.0 0.0 0.0 0.3194258960405024 6.103679542175204E-4 40-41 0.0 0.0 0.0 0.47289274532926096 6.510591511653551E-4 42-43 0.0 0.0 0.0 0.6144777651092518 6.714047496392725E-4 44-45 0.0 0.0 0.0 0.7894092207879932 7.324415450610245E-4 46-47 0.0 0.0 0.0 1.0002710033716726 7.731327420088592E-4 48-49 0.0 0.0 0.0 1.2156698544150355 7.731327420088592E-4 50-51 0.0 0.0 0.0 1.4426453509900576 8.13823938956694E-4 52-53 0.0 0.0 0.0 1.6665486621955181 8.545151359045287E-4 54-55 0.0 0.0 0.0 1.9174709281743407 8.545151359045287E-4 56-57 0.0 0.0 0.0 2.221393478177718 8.545151359045287E-4 58-59 0.0 0.0 0.0 2.545763354647382 8.545151359045287E-4 60-61 0.0 0.0 0.0 2.8737954388423517 8.545151359045287E-4 62-63 0.0 0.0 0.0 3.20815500416271 9.358975298001981E-4 64-65 0.0 0.0 0.0 3.5630025871463022 9.765887267480329E-4 66-67 0.0 0.0 0.0 3.982508482080004 9.969343252219502E-4 68-69 0.0 0.0 0.0 4.443254905120336 0.0010172799236958675 70-71 0.0 0.0 0.0 4.932546202819575 0.0010376255221697848 72-73 0.0 0.0 0.0 5.417870108816398 0.0010579711206437023 74-75 0.0 0.0 0.0 5.9084838704164415 0.0010783167191176196 76-77 0.0 0.0 0.0 6.459340949097754 0.001342809499278545 78-79 0.0 0.0 0.0 7.069342682542744 0.0013631550977524624 80-81 0.0 0.0 0.0 7.712365322310902 0.0013835006962263797 82-83 0.0 0.0 0.0 8.368287071511524 0.001505574287069884 84-85 0.0 0.0 0.0 9.021848731289172 0.001505574287069884 86-87 0.0 0.0 0.0 9.718868589407105 0.001586956680965553 88-89 0.0 0.0 0.0 10.478471508430808 0.001627647877913388 90-91 0.0 0.0 0.0 11.279152190773353 0.001627647877913388 92-93 0.0 0.0 0.0 12.094013755252217 0.0017700670672308094 94-95 4.0691196947834696E-5 0.0 0.0 12.90830564297381 0.0018311038626525615 96-97 4.0691196947834696E-5 0.0 0.0 13.750857566975675 0.0019328318550221482 98-99 4.0691196947834696E-5 0.0 0.0 14.645656987858562 0.0020549054458656522 100-101 4.0691196947834696E-5 0.0 0.0 15.613212268884174 0.0020752510443395695 102-103 4.0691196947834696E-5 0.0 0.0 16.583534551302243 0.002115942241287404 104-105 4.0691196947834696E-5 0.0 0.0 17.55052015557058 0.002156633438235239 106-107 4.0691196947834696E-5 0.0 0.0 18.521493497139815 0.002156633438235239 108-109 4.0691196947834696E-5 0.0 0.0 19.534399117163794 0.0022583614306048256 110-111 4.0691196947834696E-5 0.0 0.0 20.59411995927625 0.002319398226026578 112-113 4.0691196947834696E-5 0.0 0.0 21.671968729628972 0.002319398226026578 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CATGGGG 5320 0.0 29.782337 4 GTACATG 10185 0.0 27.557734 1 GTATCAA 6920 0.0 27.556717 1 TACATGG 10130 0.0 26.989878 2 ACATGGG 9865 0.0 26.446894 3 AACGCAG 7300 0.0 25.359123 6 TCAACGC 7520 0.0 24.47538 4 GGTATCA 5420 0.0 23.9685 1 CAACGCA 7630 0.0 23.96639 5 TATCAAC 7880 0.0 23.660057 2 ATCAACG 7750 0.0 23.59578 3 ACGCAGA 8175 0.0 22.642998 7 CGCAGAG 8380 0.0 21.661163 8 ATGGGGG 3140 0.0 21.246002 5 GTATAGC 985 0.0 19.359646 1 GCAGAGT 9185 0.0 19.113977 9 GTATAGT 690 0.0 18.136515 1 ATGGGGA 3125 0.0 17.917055 5 GTGTAGC 1600 0.0 17.504976 1 TACACCG 205 0.0013762908 17.433565 5 >>END_MODULE