##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920917_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3317481 Sequences flagged as poor quality 0 Sequence length 125 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.700473943935172 31.0 30.0 34.0 25.0 34.0 2 29.739639805020737 31.0 30.0 34.0 25.0 34.0 3 29.850090173839728 31.0 30.0 34.0 25.0 34.0 4 33.26004127830725 37.0 35.0 37.0 27.0 37.0 5 33.347888955505695 37.0 35.0 37.0 27.0 37.0 6 33.37131154632084 37.0 35.0 37.0 27.0 37.0 7 33.25057294977726 37.0 35.0 37.0 26.0 37.0 8 33.17302525621096 37.0 35.0 37.0 26.0 37.0 9 34.58884617575805 39.0 35.0 39.0 26.0 39.0 10-11 34.60676850899824 39.0 35.0 39.0 27.0 39.0 12-13 34.560695449348465 39.0 35.0 39.0 26.5 39.0 14-15 35.6967061755591 40.0 36.0 41.0 26.5 41.0 16-17 35.684064053418844 40.0 36.0 41.0 26.5 41.0 18-19 35.66935861878335 40.0 36.0 41.0 26.0 41.0 20-21 35.70974860142379 40.0 36.0 41.0 26.0 41.0 22-23 35.62783584894684 40.0 36.0 41.0 26.0 41.0 24-25 35.63821420529612 40.0 36.0 41.0 26.0 41.0 26-27 35.58022050465398 40.0 35.5 41.0 26.0 41.0 28-29 35.4710659985694 40.0 35.0 41.0 25.5 41.0 30-31 35.3283239602578 40.0 35.0 41.0 25.0 41.0 32-33 35.20607277027359 40.0 35.0 41.0 25.0 41.0 34-35 35.14319584648714 40.0 35.0 41.0 24.5 41.0 36-37 34.995252421943036 40.0 35.0 41.0 24.0 41.0 38-39 34.85074202384279 39.0 35.0 41.0 23.5 41.0 40-41 34.720758611729806 39.0 34.0 41.0 23.0 41.0 42-43 34.51783898686986 39.0 34.0 41.0 22.0 41.0 44-45 34.350529814639486 39.0 34.0 41.0 21.0 41.0 46-47 34.14553964287964 39.0 33.0 41.0 19.5 41.0 48-49 34.01007225060219 39.0 33.0 40.5 18.5 41.0 50-51 33.80770620841536 38.0 33.0 40.0 17.5 41.0 52-53 33.61209212652612 38.0 33.0 40.0 15.5 41.0 54-55 33.37158404222963 38.0 33.0 40.0 13.5 41.0 56-57 33.102160796098005 38.0 32.0 40.0 10.5 41.0 58-59 32.837468549179334 37.0 32.0 40.0 8.0 41.0 60-61 32.56368597137406 37.0 31.5 40.0 7.5 41.0 62-63 32.24141253559553 36.0 31.0 40.0 7.0 41.0 64-65 31.951137625204183 36.0 31.0 39.0 4.0 41.0 66-67 31.593635803792093 35.0 31.0 39.0 2.0 40.5 68-69 31.255988655247762 35.0 30.5 38.5 2.0 40.0 70-71 30.904182872486686 35.0 30.0 38.0 2.0 40.0 72-73 30.963470777978834 35.0 30.5 37.0 2.0 40.0 74-75 30.95859946145886 35.0 31.0 37.0 2.0 39.0 76-77 30.701455562217237 35.0 31.0 36.5 2.0 39.0 78-79 30.415875177582027 35.0 31.0 36.0 2.0 39.0 80-81 30.150366196520793 35.0 31.0 36.0 2.0 37.0 82-83 29.9178955357996 35.0 31.0 35.0 2.0 37.0 84-85 29.688361591219362 35.0 30.0 35.0 2.0 36.5 86-87 29.49271374877505 35.0 30.0 35.0 2.0 36.0 88-89 29.30151596949613 35.0 30.0 35.0 2.0 36.0 90-91 29.135987666545795 34.0 30.0 35.0 2.0 36.0 92-93 28.974871295419625 34.0 30.0 35.0 2.0 35.0 94-95 28.861018797093337 34.0 30.0 35.0 2.0 35.0 96-97 28.764477626247142 34.0 29.5 35.0 2.0 35.0 98-99 28.629957790263155 34.0 29.0 35.0 2.0 35.0 100-101 28.49963797833356 34.0 29.0 35.0 2.0 35.0 102-103 27.121586679772996 32.5 26.0 34.5 2.0 35.0 104-105 28.137838769837717 34.0 29.0 35.0 2.0 35.0 106-107 28.284597560619037 34.0 29.0 35.0 2.0 35.0 108-109 28.206436299107665 34.0 29.0 35.0 2.0 35.0 110-111 28.09541923525711 34.0 29.0 35.0 2.0 35.0 112-113 27.965843511989974 34.0 29.0 35.0 2.0 35.0 114-115 27.846030165658824 34.0 29.0 35.0 2.0 35.0 116-117 27.6190143967667 34.0 28.0 35.0 2.0 35.0 118-119 27.40235573316019 34.0 27.0 35.0 2.0 35.0 120-121 27.211789607837993 34.0 27.0 35.0 2.0 35.0 122-123 26.900562806539057 34.0 27.0 35.0 2.0 35.0 124-125 25.6050765626088 32.5 21.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 128292.0 3 19068.0 4 12764.0 5 11992.0 6 16022.0 7 16674.0 8 15741.0 9 16760.0 10 18062.0 11 19655.0 12 19943.0 13 20126.0 14 19836.0 15 17684.0 16 14166.0 17 12938.0 18 12453.0 19 12609.0 20 13374.0 21 14414.0 22 16960.0 23 22419.0 24 30407.0 25 38661.0 26 42715.0 27 47147.0 28 55238.0 29 64567.0 30 76899.0 31 93568.0 32 117102.0 33 150320.0 34 204136.0 35 299093.0 36 531431.0 37 816918.0 38 276960.0 39 367.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.46900784525903 18.233252739077503 11.936635282410002 25.361104133253466 2 16.049668929147668 20.9064413543492 38.323258576372695 24.720631140130436 3 19.259073845326064 24.66580452542627 28.93488317462829 27.140238454619375 4 12.924058744816 16.426464688724497 35.95763993217898 34.69183663428053 5 13.693317773728522 38.19915187070029 33.96889186124979 14.138638494321398 6 32.76232852882629 36.17842989872485 17.050664128778127 14.008577443670733 7 28.088369082589153 32.73400713023773 21.05951772073789 18.118106066435228 8 26.11277504277496 35.61100385314076 19.847702733403754 18.42851837068053 9 26.2611779593588 16.26251462258273 19.119292817652887 38.357014600405584 10-11 25.026299807853768 26.62229915982409 27.43307539861518 20.918325633706957 12-13 25.34111408075969 24.11187564479249 27.397376184759064 23.14963408968875 14-15 22.872147638707666 25.517094296189924 24.659789019041558 26.95096904606085 16-17 23.02676122765995 28.252733716365587 25.57181462598398 23.14869042999048 18-19 23.187257125146015 27.46322705975598 26.90086218923519 22.44865362586281 20-21 23.950545302304423 26.64282178747915 26.608390690844946 22.79824221937148 22-23 23.642489548563702 26.50691147503011 26.356439746613937 23.494159229792256 24-25 23.29220853842193 26.65995463041524 26.508737762171318 23.539099068991508 26-27 23.20367576770292 26.736899481979066 26.54767539124562 23.511749359072397 28-29 23.22930931510651 26.89561301376061 26.680335780602427 23.19474189053046 30-31 23.528753516361327 26.79951058614593 26.421109162122335 23.250626735370407 32-33 23.07825149742866 26.93545095705272 26.41232940368758 23.57396814183104 34-35 23.27180540752177 27.047155758049513 26.499363314390873 23.181675520037835 36-37 23.499695939342313 26.778694517979396 26.401182699431214 23.320426843247077 38-39 23.378398718410065 26.904822160091964 26.413578193183817 23.303200928314155 40-41 23.404333298995457 26.861910916291855 26.485164605363554 23.24859117934913 42-43 23.33490995461382 26.849307382629696 26.38051392625153 23.43526873650496 44-45 23.18567518605946 26.946619017427487 26.488023242275748 23.379682554237306 46-47 23.188704794815866 26.965355416779964 26.40728208408908 23.438657704315087 48-49 23.17009393599227 26.979996754795877 26.407169970883643 23.442739338328213 50-51 23.029713326750077 27.074479668416235 26.377250728551687 23.518556276282002 52-53 23.15875626089228 26.964485968905315 26.268511218179768 23.60824655202264 54-55 23.058634180079288 26.902493938474898 26.319890775668597 23.718981105777214 56-57 23.07066415324379 27.056859531503726 26.234165488656796 23.638310826595692 58-59 23.016027765273954 26.795148164652353 26.422265300721353 23.766558769352336 60-61 23.175016118268502 26.826409075999052 26.460367911260917 23.53820689447153 62-63 23.05115127042327 26.757738186171302 26.571747550399422 23.61936299300601 64-65 22.974558600901744 26.762410770525552 26.458475995184692 23.80455463338801 66-67 22.980348192531974 26.994406913903752 26.320606528926664 23.704638364637603 68-69 23.15081985458622 26.77378281073482 26.336434534769264 23.738962799909697 70-71 23.02928799119071 26.6857703498411 26.449990363708913 23.834951295259277 72-73 23.05951662159888 26.77082321745996 26.392009520632765 23.777650640308394 74-75 22.93027450164297 26.911958306754798 26.405480683245642 23.752286508356594 76-77 23.019706227674682 26.70177637318843 26.489232947925878 23.789284451211007 78-79 23.06242723658891 26.78138402794115 26.48025660978302 23.675932125686916 80-81 23.062082955824533 26.737274384454558 26.413380882351166 23.78726177736974 82-83 23.014355582299157 26.686528313780844 26.488620648572507 23.81049545534749 84-85 23.08241610827325 26.74144319996187 26.359783669460256 23.81635702230462 86-87 23.088443178915245 26.605233005459933 26.493534068703518 23.812789746921304 88-89 23.02194107576221 26.53122837421118 26.4694603334117 23.97737021661491 90-91 23.08713020896954 26.567241381910417 26.479337546805887 23.866290862314152 92-93 23.109927858805932 26.632737384338846 26.42617591352708 23.831158843328147 94-95 22.948436608564656 26.55885578969323 26.579758216531346 23.912949385210762 96-97 23.153441326742566 26.428423114974574 26.474776230110496 23.943359328172363 98-99 23.06600586362923 26.575618515171534 26.261884344188367 24.096491277010866 100-101 22.901714581945782 26.712791352194454 26.462439981187835 23.92305408467193 102-103 22.860144778062057 26.74369687078178 26.432822713822674 23.96333563733349 104-105 22.796082688741123 26.902579876660486 26.278192427737824 24.02314500686057 106-107 22.80475053164201 26.955222638192993 26.274048299725756 23.965978530439237 108-109 22.849250881686007 26.961005855688956 26.230684678742378 23.95905858388266 110-111 22.80161938435344 27.229288868881596 26.130315348635897 23.838776398129067 112-113 22.82232968199665 27.359146300542687 26.127233009672135 23.69129100778853 114-115 22.82503192693934 27.493332593348217 25.985979896132633 23.69565558357981 116-117 22.802331591331143 27.424929036196854 26.03854645499211 23.73419291747989 118-119 22.898698210467312 27.384466386334744 25.928852717763323 23.78798268543462 120-121 22.926499472768555 27.58194105624848 25.85227204177314 23.63928742920983 122-123 22.95516485478615 27.741693319065103 25.719132179408145 23.584009646740604 124-125 23.089644425487656 27.864206118470943 25.48384051120586 23.562308944835543 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2471.0 1 1859.0 2 1063.0 3 818.5 4 673.0 5 556.5 6 539.5 7 588.5 8 658.0 9 687.0 10 670.0 11 698.0 12 809.0 13 930.5 14 1066.5 15 1237.5 16 1402.5 17 1641.5 18 1954.5 19 2343.0 20 2821.0 21 3475.5 22 4491.5 23 5852.0 24 7452.0 25 9397.0 26 12603.5 27 16426.0 28 19627.0 29 23513.0 30 28750.0 31 34542.0 32 40416.5 33 45977.5 34 51463.5 35 57611.0 36 64711.0 37 71186.0 38 77334.0 39 83391.5 40 88607.0 41 94173.5 42 99431.5 43 107080.0 44 114884.0 45 120537.0 46 125724.0 47 129250.5 48 133773.5 49 138383.0 50 142161.5 51 140960.0 52 134513.0 53 130990.0 54 127314.5 55 119759.0 56 109883.5 57 98940.5 58 89908.5 59 80055.5 60 67455.5 61 55500.0 62 45138.0 63 34931.0 64 25736.5 65 19427.5 66 14646.0 67 11389.0 68 8875.0 69 6325.0 70 4801.0 71 3684.0 72 2735.0 73 2181.5 74 1673.5 75 1247.0 76 905.0 77 578.0 78 357.5 79 245.5 80 172.0 81 124.5 82 103.0 83 87.0 84 68.0 85 50.5 86 38.0 87 30.5 88 29.5 89 26.5 90 18.5 91 14.5 92 11.5 93 9.0 94 9.5 95 6.5 96 6.5 97 8.5 98 9.0 99 9.0 100 9.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.16328654180687094 2 0.14306035211656074 3 0.16795876148197986 4 0.13998573013681165 5 0.16536643314611296 6 0.10369313343467527 7 0.10327112649627834 8 0.0916960790431053 9 0.09820704323551516 10-11 0.08494396802875434 12-13 0.07418279109963252 14-15 0.07362513907389372 16-17 0.07362513907389372 18-19 0.07154524773465168 20-21 0.065230215335069 22-23 0.05751351703295361 24-25 0.06161301300595241 26-27 0.07125888588359662 28-29 0.06694838644139936 30-31 0.06289410549751452 32-33 0.07178639455659279 34-35 0.06828976563844677 36-37 0.0709273090034276 38-39 0.06703881649962729 40-41 0.07190696796756334 42-43 0.07159046276376564 44-45 0.06459720492747359 46-47 0.06198980491523538 48-49 0.05483075863885882 50-51 0.06025656213253369 52-53 0.062065163297091976 54-55 0.06337639914139674 56-57 0.06675245464857221 58-59 0.05511712048991388 60-61 0.06461227660384491 62-63 0.06003048698696391 64-65 0.054333393318605296 66-67 0.05905082802282817 68-69 0.06165822803506636 70-71 0.05697093668358613 72-73 0.052298717008477213 74-75 0.05534319563548368 76-77 0.06506442689498447 78-79 0.058508247673460675 80-81 0.05682021991987294 82-83 0.06167329971143769 84-85 0.06304482226122772 86-87 0.056428356334218645 88-89 0.05578027425025193 90-91 0.0580560973823211 92-93 0.05308244417978581 94-95 0.06259267197008815 96-97 0.04914873664687153 98-99 0.04872672970847459 100-101 0.046465978252776735 102-103 0.04548631928864099 104-105 0.04313513777471521 106-107 0.05455946846417508 108-109 0.05475540025700222 110-111 0.06099507427472832 112-113 0.06114579103844151 114-115 0.0632708974067975 116-117 0.06735532170342498 118-119 0.060482637278103484 120-121 0.06176372976966559 122-123 0.05899054131734289 124-125 0.07050530206503067 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 3317481.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.785848509306774 #Duplication Level Percentage of deduplicated Percentage of total 1 68.18759044878807 31.902142769516523 2 14.153530732593042 13.243698894538314 3 6.316508384805633 8.86569613197847 4 3.48755106082674 6.52672142401248 5 2.073998753325654 4.851689574079257 6 1.3356419685657124 3.7493485682392613 7 0.9372577239790573 3.0695278521783287 8 0.6592821238727321 2.467605885792293 9 0.48635746561934595 2.0479182037053385 >10 2.24850456897514 17.647375763528565 >50 0.08493944777432988 2.7152840879133806 >100 0.027480188162029517 2.189847759683925 >500 9.047551423482738E-4 0.2962476879688666 >1k 4.5237757004919416E-4 0.4268953968650243 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 3.0143352742638165E-5 0.0 0.0 0.0 0.0 3 3.0143352742638165E-5 0.0 0.0 0.0 0.0 4 3.0143352742638165E-5 0.0 0.0 0.0 0.0 5 3.0143352742638165E-5 0.0 0.0 0.0 0.0 6 6.028670548527633E-5 0.0 0.0 0.0 0.0 7 1.2057341097055266E-4 0.0 0.0 0.0 0.0 8 1.2057341097055266E-4 0.0 0.0 0.0 0.0 9 1.2057341097055266E-4 0.0 0.0 0.0 0.0 10-11 1.2057341097055266E-4 0.0 0.0 0.0 0.0 12-13 2.4114682194110532E-4 0.0 0.0 0.0 0.0 14-15 2.712901746837435E-4 0.0 0.0 0.0 0.0 16-17 2.712901746837435E-4 0.0 0.0 0.0 0.0 18-19 3.0143352742638163E-4 0.0 0.0 0.0 0.0 20-21 3.4664855654033884E-4 0.0 0.0 3.0143352742638165E-5 0.0 22-23 3.6172023291165795E-4 0.0 0.0 2.1100346919846716E-4 0.0 24-25 5.124369966248487E-4 0.0 0.0 5.275086729961678E-4 0.0 26-27 5.124369966248487E-4 0.0 0.0 0.0010550173459923358 0.0 28-29 6.330104075954015E-4 0.0 0.0 0.003391127183546793 0.0 30-31 6.932971130806778E-4 0.0 0.0 0.012946570002963093 0.0 32-33 7.083687894519968E-4 0.0 0.0 0.03832727301226443 0.0 34-35 8.289422004225495E-4 0.0 0.0 0.08060332523381444 0.0 36-37 9.344439350217831E-4 0.0 0.0 0.15442439610053532 0.0 38-39 0.001085160698734974 0.0 0.0 0.2750731654529446 0.0 40-41 0.0011002323751062928 0.0 0.0 0.4145012435640174 0.0 42-43 0.0012358774624481646 0.0 0.0 0.5485939482396434 0.0 44-45 0.0013564508734187175 0.0 0.0 0.7151359721427191 0.0 46-47 0.0014920959607605893 0.0 0.0 0.9188447499774679 0.0 48-49 0.0015071676371319082 0.0 0.0 1.1329981995375407 0.0 50-51 0.0015071676371319082 0.0 0.0 1.36024893586429 0.0 52-53 0.0015071676371319082 0.0 0.0 1.587650388954752 0.0 54-55 0.0015674543426171846 0.0 0.0 1.8444265392929153 0.0 56-57 0.0017483144590730135 0.0 0.0 2.1493868389901856 0.0 58-59 0.0017483144590730135 0.0 0.0 2.4749350486106776 0.0 60-61 0.0017633861354443324 0.0 0.0 2.8126461010628248 0.0 62-63 0.0017784578118156516 0.0 0.0 3.1576367732023183 0.0 64-65 0.00180860116455829 0.0 0.0 3.521014890514821 0.0 66-67 0.0018990312227862044 0.0 0.0 3.9438055560830643 0.0 68-69 0.0019291745755288425 0.0 0.0 4.42112554676274 0.0 70-71 0.0019894612810141188 0.0 0.0 4.934934065937378 0.0 72-73 0.0020648196628707143 0.0 0.0 5.443603143469398 0.0 74-75 0.0021100346919846716 0.0 0.0 5.950840411746141 0.0 76-77 0.0021100346919846716 0.0 0.0 6.5153801935866404 0.0 78-79 0.0021100346919846716 0.0 0.0 7.15316832259175 0.0 80-81 0.002381324866668415 0.0 0.0 7.829796161605749 0.0 82-83 0.0024416115721536914 0.0 0.0 8.513929695452664 0.0 84-85 0.002547113306752925 0.0 0.0 9.19554625934557 0.0 86-87 0.0026676867177234777 0.0 0.0 9.916831475447786 0.0 88-89 0.0026827583940947967 0.0 0.0 10.70649688724668 0.0 90-91 0.002743045099580073 0.0 0.0 11.539418010231257 0.0 92-93 0.002803331805065349 0.0 0.0 12.391208872032728 0.0 94-95 0.002803331805065349 0.0 0.0 13.24865161247344 0.0 96-97 0.0028334751578079874 0.0 0.0 14.117654328690955 0.0 98-99 0.0029841919215211786 0.0 0.0 15.03954355729543 0.0 100-101 0.003104765332491731 0.0 0.0 16.044040644091105 0.0 102-103 0.0031951953907196455 0.0 0.0 17.064619209574975 0.0 104-105 0.0033308404780615173 0.0 0.0 18.05573264775292 0.0 106-107 0.0034514138890320697 0.0 0.0 19.04877526050639 0.0 108-109 0.003496628918146027 0.0 0.0 20.08183317402571 0.0 110-111 0.0035870589763739415 0.0 0.0 21.178403131773777 0.0 112-113 0.0036473456818592177 0.0 0.0 22.309637945175872 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACATG 14705 0.0 28.08143 1 GTATCAA 9705 0.0 27.997568 1 TACATGG 14870 0.0 27.118032 2 CATGGGG 8755 0.0 27.075792 4 ACATGGG 15135 0.0 26.013544 3 AACGCAG 10550 0.0 24.882345 6 TCAACGC 10730 0.0 24.645493 4 CAACGCA 10815 0.0 24.451794 5 TATCAAC 11165 0.0 23.953453 2 ATCAACG 11140 0.0 23.846804 3 ACGCAGA 12075 0.0 21.785534 7 CGCAGAG 12160 0.0 21.533413 8 GTACTAG 665 0.0 21.505058 1 GGTATCA 7400 0.0 20.935947 1 ATGGGGG 4765 0.0 18.499205 5 GCAGAGT 13605 0.0 18.458979 9 ATACCGT 390 5.86806E-9 18.315628 6 GTATAGG 790 0.0 18.102358 1 ATGGGGA 4385 0.0 17.521624 5 TAGACAG 1760 0.0 17.258846 5 >>END_MODULE