##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920916_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2512144 Sequences flagged as poor quality 0 Sequence length 125 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.659927934067476 31.0 30.0 34.0 16.0 34.0 2 28.69376437019534 31.0 30.0 34.0 16.0 34.0 3 28.794779678235006 31.0 30.0 34.0 16.0 34.0 4 32.12311953454898 35.0 33.0 37.0 18.0 37.0 5 32.228820879694794 35.0 33.0 37.0 19.0 37.0 6 32.23153330382335 37.0 33.0 37.0 19.0 37.0 7 32.09244334719666 36.0 33.0 37.0 17.0 37.0 8 31.98597652045424 36.0 33.0 37.0 17.0 37.0 9 33.264453789273226 38.0 33.0 39.0 17.0 39.0 10-11 33.28540203109375 38.0 33.0 39.0 17.0 39.0 12-13 33.21655307179843 38.0 33.0 39.0 16.5 39.0 14-15 34.24326929507225 39.0 33.0 41.0 16.5 41.0 16-17 34.2224751049303 39.0 33.0 41.0 17.0 41.0 18-19 34.20286237572368 39.0 33.5 41.0 16.5 41.0 20-21 34.24826741619907 39.0 34.0 41.0 17.0 41.0 22-23 34.16107615646237 39.0 33.0 41.0 17.0 41.0 24-25 34.16777461801553 39.0 33.0 41.0 17.0 41.0 26-27 34.08745895935902 39.0 33.0 41.0 16.5 41.0 28-29 33.95985918800833 39.0 33.0 41.0 16.0 41.0 30-31 33.78823526836041 39.0 33.0 41.0 13.0 41.0 32-33 33.63603181187065 39.0 33.0 41.0 9.5 41.0 34-35 33.54971649714348 39.0 33.0 41.0 9.0 41.0 36-37 33.37981540867084 38.0 32.0 41.0 8.0 41.0 38-39 33.21732631568891 38.0 32.0 41.0 7.5 41.0 40-41 33.07140633657943 38.0 32.0 41.0 2.0 41.0 42-43 32.850406266519755 38.0 31.5 40.5 2.0 41.0 44-45 32.66540711838175 38.0 31.0 40.0 2.0 41.0 46-47 32.442862749906055 38.0 31.0 40.0 2.0 41.0 48-49 32.29776816137928 38.0 31.0 40.0 2.0 41.0 50-51 32.08190872020076 38.0 31.0 40.0 2.0 41.0 52-53 31.874872220700723 37.5 30.0 40.0 2.0 41.0 54-55 31.627233152239683 37.0 30.0 40.0 2.0 41.0 56-57 31.348751106624462 37.0 30.0 40.0 2.0 41.0 58-59 31.072098374933923 36.0 29.5 40.0 2.0 41.0 60-61 30.800583485660056 36.0 29.0 40.0 2.0 41.0 62-63 30.488755421663726 35.5 29.0 39.0 2.0 41.0 64-65 30.206870505830878 35.0 29.0 39.0 2.0 40.5 66-67 29.86054143393054 35.0 28.0 39.0 2.0 40.0 68-69 29.536250708558107 35.0 28.0 38.0 2.0 40.0 70-71 29.198483247775606 34.5 28.0 37.5 2.0 40.0 72-73 29.257533803794686 35.0 28.5 37.0 2.0 39.5 74-75 29.26567426071117 35.0 29.0 37.0 2.0 39.0 76-77 29.006102556222892 35.0 29.0 36.0 2.0 39.0 78-79 28.717674623747683 34.5 29.0 36.0 2.0 39.0 80-81 28.45286894381851 34.0 28.5 35.5 2.0 37.0 82-83 28.20957337636696 34.0 28.0 35.0 2.0 37.0 84-85 27.9710100217185 34.0 28.0 35.0 2.0 36.5 86-87 27.770337608035206 34.0 27.0 35.0 2.0 36.0 88-89 27.560310236992784 34.0 27.0 35.0 2.0 36.0 90-91 27.377121096561346 34.0 26.5 35.0 2.0 35.5 92-93 27.204013185549872 34.0 26.0 35.0 2.0 35.0 94-95 27.076069285837118 34.0 26.0 35.0 2.0 35.0 96-97 26.97347425147603 34.0 25.5 35.0 2.0 35.0 98-99 26.833597914769218 34.0 25.0 35.0 2.0 35.0 100-101 26.695433462412982 34.0 25.0 35.0 2.0 35.0 102-103 25.354349113745073 31.5 21.5 34.0 2.0 35.0 104-105 26.346542833531835 33.5 24.5 35.0 2.0 35.0 106-107 26.50406425746295 34.0 25.0 35.0 2.0 35.0 108-109 26.432880041908426 34.0 25.0 35.0 2.0 35.0 110-111 26.32595683209243 34.0 24.0 35.0 2.0 35.0 112-113 26.19731611722895 34.0 24.0 35.0 2.0 35.0 114-115 26.077226862791306 34.0 23.5 35.0 2.0 35.0 116-117 25.844581560611175 34.0 21.5 35.0 2.0 35.0 118-119 25.627957832035108 34.0 19.0 35.0 2.0 35.0 120-121 25.432593434134347 34.0 17.5 35.0 2.0 35.0 122-123 25.11668777745225 34.0 2.0 35.0 2.0 35.0 124-125 23.825773124470572 31.5 2.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 146178.0 3 20566.0 4 13575.0 5 13361.0 6 18079.0 7 18105.0 8 16528.0 9 17231.0 10 18394.0 11 19125.0 12 19230.0 13 18677.0 14 19064.0 15 17193.0 16 14599.0 17 13130.0 18 12611.0 19 12506.0 20 12704.0 21 13714.0 22 15679.0 23 19873.0 24 26253.0 25 32123.0 26 35836.0 27 39247.0 28 45512.0 29 52958.0 30 62038.0 31 74026.0 32 91544.0 33 115251.0 34 152369.0 35 219208.0 36 370784.0 37 529838.0 38 174751.0 39 284.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.73008790628646 19.142325565074817 12.171268528464873 24.95631800017385 2 15.781674576141452 21.964141056552744 37.96607696429255 24.288107403013253 3 18.917261331530895 25.627752754998074 29.391019314395773 26.063966599075254 4 12.699053076435185 17.335203287781763 36.10667829674152 33.859065339041535 5 13.173156751764711 39.045424348446076 33.91186765633586 13.869551243453357 6 31.559086885950805 37.34230459159295 17.10417092574283 13.994437596713407 7 26.94314476165959 33.90002203737746 21.24327471444062 17.91355848652233 8 25.46020581454377 36.19848759064056 20.09222047163774 18.249086123177925 9 25.788460473269552 16.87983840470472 19.490858461059048 37.84084266096668 10-11 24.389551504381764 27.465072405158107 27.584522488530123 20.560853601930006 12-13 24.660807035541236 25.379539761664066 27.413671697981663 22.54598150481303 14-15 22.52527856115876 26.689842083939048 24.860316055217837 25.924563299684362 16-17 22.31578452535634 29.1258914053594 25.922180394290944 22.636143674993324 18-19 22.451113750575406 28.3286779743123 27.328972573584583 21.891235701527716 20-21 23.532187340970406 27.42669575964236 26.918717266667798 22.12239963271944 22-23 23.05399084034169 27.318672940929044 26.69409465723775 22.933241561491517 24-25 22.762807572133962 27.44121813144003 26.87538737797096 22.920586918455044 26-27 22.581029400047807 27.40092422914509 26.96233367859135 23.05571269221576 28-29 22.616895324864206 27.77274413937431 26.99703047423779 22.613330061523698 30-31 22.897932543513424 27.5976750351089 26.806168809117736 22.69822361225994 32-33 22.445122658094668 27.784660836295593 26.770175472842883 23.000041032766855 34-35 22.789826544370186 27.765967257692846 26.83565724930121 22.608548948635757 36-37 22.95015582405088 27.478853303896138 26.794227399138638 22.77676347291434 38-39 22.692755770289104 27.662929588540308 26.79719451243669 22.8471201287339 40-41 22.758938977185288 27.58431049631294 26.92123597298303 22.735514553518733 42-43 22.615216561641247 27.6337689717017 26.739094234451148 23.011920232205902 44-45 22.581028730767315 27.749818254244886 26.767972912413484 22.90118010257432 46-47 22.566923713956914 27.76419446366424 26.750126372621775 22.918755449757075 48-49 22.460407220669836 27.77832544395314 26.657541552428484 23.10372578294854 50-51 22.3025257984201 27.931284675978457 26.707850132654258 23.058339392947186 52-53 22.411204257742224 27.738978668467677 26.55514166150655 23.294675412283553 54-55 22.362434383019135 27.729662420600366 26.53967372556268 23.368229470817823 56-57 22.493002867370375 27.645824386909368 26.49664543957449 23.364527306145767 58-59 22.356991486394744 27.41777606682948 26.638628534647797 23.58660391212798 60-61 22.351995216634702 27.28593613721343 26.812339951158528 23.54972869499334 62-63 22.218754574523278 27.238516515087092 26.844114188067554 23.69861472232208 64-65 22.158188505675707 27.26334725598663 26.78964645302932 23.788817785308343 66-67 22.270279593123554 27.28274503383932 26.60070080512527 23.846274567911856 68-69 22.445790897618924 27.041773950950898 26.753918797481262 23.75851635394891 70-71 22.176006952936238 26.894491901119817 27.00994266695451 23.919558478989433 72-73 22.197142955009465 26.85003739983893 27.04789011536994 23.90492952978166 74-75 22.043930609130776 27.05420994866404 27.02750338213472 23.874356060070458 76-77 22.051967612210134 26.708055977745293 27.24621926349705 23.99375714654752 78-79 22.16639112926916 26.84260033215849 27.156276805646257 23.83473173292609 80-81 22.156122234988143 26.738789141439035 27.198760610302635 23.906328013270183 82-83 22.119645597795802 26.577078257114874 27.357924636752877 23.94535150833645 84-85 22.16707688741044 26.660338419167655 27.06234014237362 24.110244551048286 86-87 22.0632386302645 26.564191887880256 27.274101445410594 24.098468036444654 88-89 22.191968517736655 26.40702296643857 27.14413172841768 24.256876787407094 90-91 22.163899165019444 26.37080704829145 27.23181788760375 24.233475899085356 92-93 22.31355829928892 26.308812992120494 27.177498146924496 24.200130561666093 94-95 22.00620680836927 26.29199962238132 27.373849268801965 24.327944300447445 96-97 22.03828716027369 26.16091472423315 27.386485406283562 24.414312709209593 98-99 21.904712783807927 26.329979699770075 27.21804008190189 24.54726743452011 100-101 21.83497689730727 26.495760706165967 27.308073805152787 24.361188591373974 102-103 21.704021176306128 26.530739038029694 27.273893089762534 24.49134669590164 104-105 21.531563140817962 26.691679765953218 27.17653590213429 24.60022119109453 106-107 21.36266260877843 26.77925434511288 27.239789609567662 24.618293436541027 108-109 21.300154261058463 26.91749921037297 27.302992537078612 24.47935399148995 110-111 21.274679112534823 27.165521110647944 27.12861608959336 24.43118368722387 112-113 21.236702837445 27.316373086136696 27.08494489937853 24.361979177039775 114-115 21.205397110241623 27.380306263798747 27.049325460804823 24.3649711651548 116-117 21.144511673133927 27.2173417353925 27.113630560359027 24.524516031114548 118-119 21.14282061081853 27.22001627951858 26.99950388694916 24.637659222713733 120-121 21.182402874021182 27.378903596290684 27.034150112956056 24.404543416732075 122-123 21.22413781085164 27.321206472306287 26.91728978895996 24.53736592788212 124-125 21.163475148063117 27.408119599386037 26.81885487762758 24.609550374923263 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 3393.0 1 2408.5 2 1169.5 3 846.0 4 680.5 5 570.5 6 554.0 7 557.5 8 623.0 9 675.5 10 671.0 11 693.0 12 770.0 13 862.5 14 981.5 15 1144.0 16 1330.5 17 1563.5 18 1851.5 19 2265.5 20 2790.0 21 3481.0 22 4441.5 23 5717.0 24 7525.0 25 9417.0 26 12208.5 27 16089.5 28 19167.0 29 22472.0 30 26359.0 31 30964.5 32 36646.0 33 41463.5 34 45151.0 35 49068.5 36 54515.0 37 58994.5 38 61848.5 39 65474.0 40 70175.0 41 74539.5 42 77589.5 43 82019.5 44 86605.0 45 90259.5 46 94109.5 47 96708.0 48 100210.0 49 103458.5 50 105224.5 51 104245.5 52 98372.5 53 93655.0 54 89982.5 55 83953.5 56 76231.5 57 67641.0 58 60914.0 59 54667.0 60 46770.0 61 38999.5 62 31942.0 63 23997.0 64 16871.0 65 12326.5 66 9133.5 67 6857.5 68 5075.0 69 3682.0 70 2683.0 71 1931.0 72 1405.0 73 1083.5 74 823.5 75 595.5 76 415.0 77 283.5 78 198.0 79 140.5 80 106.0 81 83.5 82 78.5 83 62.0 84 47.5 85 42.5 86 34.0 87 23.5 88 18.5 89 16.0 90 17.0 91 19.0 92 12.5 93 11.0 94 14.0 95 14.0 96 10.0 97 11.0 98 10.0 99 10.0 100 14.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1690189734346439 2 0.1496729486844703 3 0.17630358769242527 4 0.14748358374360704 5 0.17395499621040833 6 0.11133915890171901 7 0.11030418638422002 8 0.09975542803278793 9 0.10608468304364718 10-11 0.0919135208809686 12-13 0.08086717958843125 14-15 0.08013075683559541 16-17 0.07931472081218274 18-19 0.07780206867122268 20-21 0.07171165347209396 22-23 0.06249641740282404 24-25 0.06671592074339687 26-27 0.07738409900069422 28-29 0.07206991318968976 30-31 0.06928344871950017 32-33 0.07782197198886688 34-35 0.07585154354208994 36-37 0.07726467909482895 38-39 0.07362237196593825 40-41 0.07736419568305002 42-43 0.07794139189473215 44-45 0.07041793782522021 46-47 0.06810915297849168 48-49 0.05933178989739442 50-51 0.06649698424931055 52-53 0.06789021648440535 54-55 0.06934315867243279 56-57 0.07284614257781401 58-59 0.06032695577960499 60-61 0.07075629422517181 62-63 0.06514355864950416 64-65 0.05921236999152915 66-67 0.063810036367342 68-69 0.06687514728455057 70-71 0.06170028469705558 72-73 0.057241941544752206 74-75 0.06072502213248922 76-77 0.06980093497824966 78-79 0.06351148660267883 80-81 0.06183960792056506 82-83 0.06619843448464738 84-85 0.06794992643733798 86-87 0.061401734932392406 88-89 0.06066531217955659 90-91 0.06394935959085148 92-93 0.05783904107407856 94-95 0.06667611410810845 96-97 0.0539180874981689 98-99 0.05314185811004465 100-101 0.051330656204421406 102-103 0.048743224910673906 104-105 0.047489315899088586 106-107 0.05885411027393335 108-109 0.05831672069753963 110-111 0.06550181836709998 112-113 0.06552172168474418 114-115 0.06872615582546224 116-117 0.07193058996618028 118-119 0.06478529893190836 120-121 0.06586007808469578 122-123 0.06375032641440936 124-125 0.07551318714213834 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 2512144.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.5148084915744 #Duplication Level Percentage of deduplicated Percentage of total 1 71.88604030835137 35.59423519085616 2 12.605793763952677 12.483469282127992 3 5.703844315802864 8.47274276888202 4 3.0187421009664064 5.978897480592182 5 1.8436993529931014 4.564521018974652 6 1.1496634036723619 3.4155217957565154 7 0.816432199614325 2.82978388071807 8 0.5528434339350388 2.1899149405694245 9 0.40354224544481426 1.79831853013139 >10 1.9021510345494905 16.105574414506197 >50 0.08554285473750085 2.8700605654345566 >100 0.02920323828477256 2.4795228113615586 >500 0.0020175384638879547 0.6815043651874371 >1k 4.84209231330233E-4 0.5359329549019562 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4205 0.16738690138781853 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.3883981173053773E-4 2 0.0 0.0 0.0 0.0 2.3883981173053773E-4 3 0.0 0.0 0.0 0.0 2.3883981173053773E-4 4 0.0 0.0 0.0 0.0 2.786464470189607E-4 5 0.0 0.0 0.0 0.0 3.1845308230738363E-4 6 0.0 0.0 0.0 0.0 5.174862587494984E-4 7 0.0 0.0 0.0 0.0 5.572928940379214E-4 8 0.0 0.0 0.0 0.0 5.970995293263444E-4 9 0.0 0.0 0.0 0.0 7.563260704800362E-4 10-11 0.0 0.0 0.0 3.582597175958066E-4 7.961327057684592E-4 12-13 0.0 0.0 0.0 3.582597175958066E-4 0.0011145857880758428 14-15 0.0 0.0 0.0 4.378729881726525E-4 0.001413135552739015 16-17 0.0 0.0 0.0 4.7767962346107547E-4 0.0017116853174021871 18-19 0.0 0.0 0.0 5.771962116821328E-4 0.0017514919526906102 20-21 0.0 0.0 0.0 6.767127999031902E-4 0.0018510085409116674 22-23 0.0 0.0 0.0 0.0010946824704316312 0.001950525129132725 24-25 0.0 0.0 0.0 0.0016519753644695526 0.0021097516702864166 26-27 0.0 0.0 0.0 0.0033437573642275285 0.002189364940863263 28-29 0.0 0.0 0.0 0.009115719481048857 0.0022092682585074745 30-31 0.0 0.0 0.0 0.027207835219637093 0.002249074893795897 32-33 0.0 0.0 0.0 0.07437869803641829 0.0023087848467285314 34-35 0.0 0.0 0.0 0.15042927475495035 0.0024680113878822233 36-37 0.0 0.0 0.0 0.2781289607602112 0.0024680113878822233 38-39 0.0 0.0 0.0 0.4781573030845365 0.002627237929035915 40-41 0.0 0.0 0.0 0.701154073970282 0.0027466578349011842 42-43 0.0 0.0 0.0 0.9034712978236916 0.0027466578349011842 44-45 3.9806635288422953E-5 0.0 0.0 1.1538749371055164 0.0029058843760548757 46-47 3.9806635288422953E-5 0.0 0.0 1.4544150335331096 0.003065110917208568 48-49 3.9806635288422953E-5 0.0 0.0 1.7627373271595896 0.0034233706348043742 50-51 3.9806635288422953E-5 0.0 0.0 2.0835987109019225 0.0035427905406696433 52-53 3.9806635288422953E-5 0.0 0.0 2.392418587469508 0.0037617270347559692 54-55 3.9806635288422953E-5 0.0 0.0 2.7359299466909537 0.003960760211198084 56-57 3.9806635288422953E-5 0.0 0.0 3.1319860644931183 0.004020470164130719 58-59 3.9806635288422953E-5 0.0 0.0 3.55775783553809 0.0041398900699959875 60-61 3.9806635288422953E-5 0.0 0.0 3.998297868275067 0.004219503340572833 62-63 3.9806635288422953E-5 0.0 0.0 4.42440799571999 0.004299116611149679 64-65 3.9806635288422953E-5 0.0 0.0 4.879079383984358 0.004319019928793891 66-67 3.9806635288422953E-5 0.0 0.0 5.399292397251113 0.004418536517014948 68-69 3.9806635288422953E-5 0.0 0.0 5.978319714156513 0.004518053105236005 70-71 3.9806635288422953E-5 0.0 0.0 6.606946098631289 0.004637473011101274 72-73 3.9806635288422953E-5 0.0 0.0 7.222794553178479 0.005095249316918139 74-75 3.9806635288422953E-5 0.0 0.0 7.831537523326688 0.00525447585807183 76-77 3.9806635288422953E-5 0.0 0.0 8.492646122196817 0.005294282493360253 78-79 3.9806635288422953E-5 0.0 0.0 9.230840270302977 0.005334089128648676 80-81 3.9806635288422953E-5 0.0 0.0 10.002073925698527 0.005473412352158157 82-83 3.9806635288422953E-5 0.0 0.0 10.796634269373094 0.005752058799177118 84-85 3.9806635288422953E-5 1.9903317644211477E-5 0.0 11.578197746625989 0.005871478705042387 86-87 3.9806635288422953E-5 3.9806635288422953E-5 0.0 12.396184295167792 0.005951091975619232 88-89 3.9806635288422953E-5 3.9806635288422953E-5 0.0 13.278677496194486 0.006010801928551866 90-91 3.9806635288422953E-5 3.9806635288422953E-5 0.0 14.213795069072473 0.006150125152061347 92-93 3.9806635288422953E-5 3.9806635288422953E-5 0.0 15.167641663853665 0.006309351693215039 94-95 3.9806635288422953E-5 3.9806635288422953E-5 0.0 16.099514995955644 0.0065083848696571535 96-97 3.9806635288422953E-5 3.9806635288422953E-5 0.0 17.06241760026495 0.006747224681387691 98-99 3.9806635288422953E-5 3.9806635288422953E-5 0.0 18.085925806800883 0.00686664458725296 100-101 3.9806635288422953E-5 3.9806635288422953E-5 0.0 19.179195141679777 0.0069661611754740175 102-103 3.9806635288422953E-5 3.9806635288422953E-5 0.0 20.28745167474476 0.0070855810813392865 104-105 3.9806635288422953E-5 3.9806635288422953E-5 0.0 21.367843563107847 0.0072050009872045555 106-107 3.9806635288422953E-5 3.9806635288422953E-5 0.0 22.444115464718585 0.007284614257781401 108-109 3.9806635288422953E-5 3.9806635288422953E-5 0.0 23.542957728537854 0.0075234540695119385 110-111 3.9806635288422953E-5 3.9806635288422953E-5 0.0 24.69868367418428 0.007722487245954053 112-113 3.9806635288422953E-5 3.9806635288422953E-5 0.0 25.889459362202167 0.007722487245954053 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CATGGGG 6620 0.0 28.430073 4 GTACATG 11445 0.0 28.319086 1 TACATGG 11635 0.0 27.131077 2 GTATCGC 180 7.272083E-7 26.454405 6 ACATGGG 11790 0.0 25.814554 3 GTATCAA 9070 0.0 24.041964 1 ATGGGGA 3025 0.0 23.233011 5 CTATGCG 240 3.5583253E-7 22.31779 9 AACGCAG 9840 0.0 21.957962 6 TCAACGC 10125 0.0 21.058958 4 CAACGCA 10205 0.0 20.952232 5 TATCAAC 10465 0.0 20.773571 2 TATACCG 175 4.7535964E-4 20.420298 5 ATCAACG 10530 0.0 20.305964 3 ACGCAGA 10640 0.0 19.801537 7 CGCAGAG 10775 0.0 19.663132 8 GGTATCA 7235 0.0 18.610842 1 ATGGGGG 3495 0.0 18.063736 5 GAGTACT 3245 0.0 17.693052 12-13 GTATAGG 610 0.0 17.580805 1 >>END_MODULE