##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920910_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3276888 Sequences flagged as poor quality 0 Sequence length 125 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.770806631169574 31.0 30.0 34.0 25.0 34.0 2 29.792116178520597 31.0 30.0 34.0 25.0 34.0 3 29.953033793037786 31.0 31.0 34.0 25.0 34.0 4 33.339595067027005 37.0 35.0 37.0 27.0 37.0 5 33.448291488753966 37.0 35.0 37.0 27.0 37.0 6 33.4085998667028 37.0 35.0 37.0 27.0 37.0 7 33.33431871946798 37.0 35.0 37.0 27.0 37.0 8 33.26131775025573 37.0 35.0 37.0 26.0 37.0 9 34.68209136229252 39.0 35.0 39.0 27.0 39.0 10-11 34.689087024030115 39.0 35.0 39.0 27.0 39.0 12-13 34.638529299750246 39.0 35.0 39.0 27.0 39.0 14-15 35.78847491888646 40.0 36.0 41.0 27.0 41.0 16-17 35.77537743127016 40.0 36.0 41.0 27.0 41.0 18-19 35.75810387782555 40.0 36.0 41.0 27.0 41.0 20-21 35.796460696856286 40.0 36.0 41.0 27.0 41.0 22-23 35.71056441355334 40.0 36.0 41.0 26.0 41.0 24-25 35.7206712588285 40.0 36.0 41.0 27.0 41.0 26-27 35.65517375021667 40.0 36.0 41.0 26.5 41.0 28-29 35.54088436956039 40.0 35.0 41.0 26.0 41.0 30-31 35.3882503765768 40.0 35.0 41.0 25.0 41.0 32-33 35.26062440950072 40.0 35.0 41.0 25.0 41.0 34-35 35.18720551327967 40.0 35.0 41.0 24.5 41.0 36-37 35.03711158269675 40.0 35.0 41.0 24.0 41.0 38-39 34.89583348591712 39.0 35.0 41.0 24.0 41.0 40-41 34.76702728320284 39.0 34.0 41.0 23.0 41.0 42-43 34.561462430208174 39.0 34.0 41.0 22.0 41.0 44-45 34.39326595843373 39.0 34.0 41.0 21.5 41.0 46-47 34.18828809529041 39.0 33.0 41.0 19.5 41.0 48-49 34.05683074917422 39.0 33.0 41.0 18.5 41.0 50-51 33.85691164910122 38.0 33.0 40.0 18.0 41.0 52-53 33.660836592523154 38.0 33.0 40.0 15.5 41.0 54-55 33.420535123568456 38.0 33.0 40.0 13.5 41.0 56-57 33.14917842782542 38.0 32.0 40.0 11.5 41.0 58-59 32.88194134190732 37.0 32.0 40.0 8.5 41.0 60-61 32.61361892747021 37.0 32.0 40.0 8.0 41.0 62-63 32.30794110143526 36.5 31.0 40.0 7.0 41.0 64-65 32.02181795654902 36.0 31.0 39.0 6.5 41.0 66-67 31.668543142151943 35.5 31.0 39.0 2.0 41.0 68-69 31.33268271604034 35.0 30.5 39.0 2.0 40.0 70-71 30.985773850067503 35.0 30.0 38.0 2.0 40.0 72-73 31.0477871077681 35.0 31.0 37.5 2.0 40.0 74-75 31.04064893276792 35.0 31.0 37.0 2.0 39.0 76-77 30.77351407799107 35.0 31.0 37.0 2.0 39.0 78-79 30.475882758275535 35.0 31.0 36.0 2.0 39.0 80-81 30.194406095051157 35.0 31.0 36.0 2.0 37.5 82-83 29.945991593243345 35.0 31.0 35.5 2.0 37.0 84-85 29.70778159033815 35.0 30.0 35.0 2.0 37.0 86-87 29.50770532895845 35.0 30.0 35.0 2.0 36.0 88-89 29.30582018671374 35.0 30.0 35.0 2.0 36.0 90-91 29.13151944771991 34.5 30.0 35.0 2.0 36.0 92-93 28.963503787740073 34.0 30.0 35.0 2.0 35.0 94-95 28.84548022391977 34.0 30.0 35.0 2.0 35.0 96-97 28.744078528164525 34.0 29.5 35.0 2.0 35.0 98-99 28.60843779219796 34.0 29.0 35.0 2.0 35.0 100-101 28.483668651476645 34.0 29.0 35.0 2.0 35.0 102-103 27.103228734091612 32.5 26.0 34.5 2.0 35.0 104-105 28.120128152075992 34.0 29.0 35.0 2.0 35.0 106-107 28.266361254946766 34.0 29.0 35.0 2.0 35.0 108-109 28.19634451955636 34.0 29.0 35.0 2.0 35.0 110-111 28.089281507332565 34.0 29.0 35.0 2.0 35.0 112-113 27.958672984856364 34.0 29.0 35.0 2.0 35.0 114-115 27.83443849774542 34.0 29.0 35.0 2.0 35.0 116-117 27.615991758033843 34.0 28.5 35.0 2.0 35.0 118-119 27.41240606941708 34.0 27.0 35.0 2.0 35.0 120-121 27.2275743022038 34.0 27.0 35.0 2.0 35.0 122-123 26.92396902182803 34.0 27.0 35.0 2.0 35.0 124-125 25.626286281374277 32.5 21.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 124503.0 3 17710.0 4 12117.0 5 11633.0 6 15299.0 7 16228.0 8 15334.0 9 16245.0 10 17783.0 11 19156.0 12 19527.0 13 19427.0 14 19742.0 15 18134.0 16 15062.0 17 14003.0 18 13291.0 19 13102.0 20 13524.0 21 14664.0 22 17781.0 23 22354.0 24 29239.0 25 37706.0 26 42856.0 27 46788.0 28 54672.0 29 63971.0 30 76152.0 31 92402.0 32 114832.0 33 147538.0 34 198884.0 35 289917.0 36 510636.0 37 812666.0 38 291596.0 39 414.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.255901489914905 18.40320932965139 11.866315427169871 25.47457375326383 2 16.11636409422791 20.689072399483024 38.505563231542716 24.68900027474635 3 19.168509471210367 24.39132425758464 29.372032126854243 27.068134144350747 4 12.73511127464493 16.437389943199843 36.60829161285433 34.219207169300894 5 13.571849321705576 37.862581605793544 34.63671303158588 13.928856040915004 6 32.54755558271151 36.51715789232497 17.104429050415867 13.830857474547662 7 27.88193138641934 32.60787146493908 21.44326382076652 18.066933327875056 8 25.824961809232803 35.67220790439677 20.059186907035073 18.44364337933535 9 26.05957703676459 16.174702365314424 19.423756276203033 38.34196432171795 10-11 24.88392358887096 26.400988295074928 28.019170285416173 20.695917830637942 12-13 25.342138174621713 24.07565200262038 27.6105224419615 22.971687380796407 14-15 22.80782043670427 25.492281812784483 25.01143740547725 26.688460345034 16-17 22.946338981441 28.05051030871398 25.87775282449922 23.1253978853458 18-19 22.911059773923977 27.453866391076676 27.179620144516775 22.45545369048257 20-21 23.916103904511726 26.656969873163987 26.761836938736742 22.66508928358754 22-23 23.39564924053395 26.6205878989569 26.48974418909649 23.494018671412665 24-25 23.08522899994702 26.702198916779384 26.790678372521565 23.42189371075203 26-27 23.139162974163114 26.72881392683361 26.81383643611539 23.31818666288789 28-29 23.086257221541217 27.016412496511 26.804247753450976 23.093082528496804 30-31 23.410227004310507 26.888451627314907 26.587536131464713 23.113785236909877 32-33 22.957750307158605 27.008777574413617 26.66495539443196 23.368516723995814 34-35 23.23371554838492 26.938854600850128 26.736119223122063 23.091310627642894 36-37 23.335781123854993 26.726390922988053 26.73524755743947 23.202580395717483 38-39 23.16595371719866 27.03621956349627 26.67384833148447 23.123978387820586 40-41 23.25566515905232 26.920421692238694 26.73589812539998 23.088015023309 42-43 23.1271876365722 26.917004111023594 26.636507147793758 23.31930110461045 44-45 23.216666852438888 26.920562831803817 26.64671422130113 23.216056094456164 46-47 23.056527822650338 26.942250693650056 26.590600805079905 23.410620678619697 48-49 22.98691495868195 26.93093139124405 26.701127127926107 23.381026522147895 50-51 22.891459387162133 27.14084827460902 26.595358750933272 23.372333587295575 52-53 23.010873261225623 27.03791769863631 26.465221306052538 23.48598773408553 54-55 23.028028712757 26.891428131685846 26.47709276311731 23.603450392439846 56-57 22.988235811482255 26.909520008159987 26.407109574123062 23.695134606234696 58-59 22.969284839675964 26.789687107816047 26.60238539449698 23.638642658011012 60-61 23.028030345135917 26.695446824858287 26.682834574301424 23.59368825570437 62-63 22.833058121275 26.740122711751056 26.644222188122903 23.782596978851043 64-65 22.80668192897454 26.73866262182429 26.638081010335263 23.816574438865906 66-67 22.877940659824205 26.78225959994766 26.473492322347358 23.866307417880776 68-69 22.931466372939926 26.557249994579657 26.568823577373063 23.942460055107354 70-71 22.78948441189336 26.328651443080258 26.894310507114444 23.987553637911937 72-73 22.838488649297297 26.25288261818448 26.907153931238536 24.001474801279688 74-75 22.621242700368573 26.48759499692892 26.868002571674904 24.023159731027597 76-77 22.641191952527848 26.25918301004384 27.043448293658436 24.056176743769875 78-79 22.676255209842644 26.307655617377613 26.991175979316058 24.024913193463686 80-81 22.717120351134387 26.237212666206904 27.005456549974554 24.04021043268415 82-83 22.69987481366719 26.150003427775548 27.142959005483984 24.00716275307328 84-85 22.745728427152397 26.216366097123622 26.914573429033506 24.123332046690475 86-87 22.532543276527008 26.084424725256273 27.114404541248966 24.268627456967756 88-89 22.60845681384478 26.012902035918856 27.082107154411446 24.296533995824923 90-91 22.6064659787065 25.979280579406023 27.09954678175963 24.31470666012785 92-93 22.704092265164945 25.96449369167072 27.097747157209835 24.2336668859545 94-95 22.480521086696623 25.937010927735255 27.186989933413646 24.395478052154477 96-97 22.46340680723916 25.87363681025278 27.191645158621135 24.47131122388692 98-99 22.42206829926909 25.922935966935352 27.099397754521576 24.555597979273987 100-101 22.300770148619385 25.986210968938806 27.2210623312323 24.49195655120951 102-103 22.249875468795295 25.977216934045554 27.242573047493444 24.5303345496657 104-105 22.114009686614644 26.04455806099175 27.130260648917996 24.711171603475606 106-107 22.003265671290873 26.108026696366615 27.25661474010127 24.632092892241246 108-109 21.945705433334545 26.169355786755794 27.229543201240187 24.655395578669474 110-111 21.932187277797212 26.3802357408887 27.14467822555046 24.542898755763627 112-113 21.938176925623225 26.39866407388452 27.08270478317004 24.580454217322213 114-115 21.842160552414246 26.457043880189723 27.098151738020988 24.60264382937504 116-117 21.75202639520616 26.425729584728696 27.159849309856 24.66239471020915 118-119 21.779901141541284 26.26877872518576 27.172808091406363 24.77851204186659 120-121 21.72728080566007 26.42128467956605 27.15395554627235 24.697478968501535 122-123 21.697682098830935 26.45434698268853 27.159047689862675 24.688923228617856 124-125 21.741314689842255 26.541840584103 26.896559622345617 24.82028510370913 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1748.0 1 1308.0 2 698.0 3 471.5 4 381.5 5 352.0 6 359.0 7 392.0 8 454.0 9 516.5 10 509.0 11 532.0 12 609.5 13 709.0 14 827.0 15 943.0 16 1122.0 17 1348.5 18 1634.0 19 1931.0 20 2416.5 21 3134.5 22 4075.0 23 5230.5 24 6729.5 25 8716.5 26 11791.5 27 15894.5 28 19615.0 29 23720.5 30 28893.5 31 34688.5 32 41023.5 33 47356.5 34 54263.5 35 60639.0 36 67645.5 37 75547.0 38 80895.0 39 85704.5 40 92055.5 41 97837.5 42 103086.0 43 110426.5 44 117229.5 45 121112.0 46 125296.0 47 129859.0 48 134643.0 49 137164.5 50 137482.5 51 134880.0 52 128223.5 53 123344.0 54 118791.0 55 112238.0 56 104657.0 57 95504.5 58 86693.5 59 77280.5 60 65016.5 61 52776.5 62 42002.5 63 32124.5 64 23930.5 65 18226.0 66 13954.0 67 10527.5 68 8069.5 69 6243.0 70 5043.0 71 3984.5 72 3039.0 73 2502.5 74 2037.0 75 1589.5 76 1156.0 77 787.5 78 545.5 79 383.0 80 280.5 81 212.0 82 138.5 83 91.0 84 78.0 85 63.5 86 46.5 87 31.0 88 28.0 89 29.5 90 26.0 91 22.0 92 19.0 93 15.0 94 17.0 95 15.0 96 11.5 97 12.0 98 11.5 99 14.0 100 20.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.16558393207213673 2 0.14583958926884288 3 0.17107694861710257 4 0.14385599996093856 5 0.16848302413753538 6 0.11025704876089754 7 0.1089753449004055 8 0.09737897663881097 9 0.10412318028568568 10-11 0.09054322271618681 12-13 0.07790928466276541 14-15 0.07763463383551712 16-17 0.07771092573197497 18-19 0.07502545097665834 20-21 0.06915097494940321 22-23 0.060682574442580885 24-25 0.06458871954122325 26-27 0.0751017428731162 28-29 0.07049371232706153 30-31 0.06757936188237132 32-33 0.07693274838810481 34-35 0.07392684766766518 36-37 0.07649025538864923 38-39 0.07157705725676312 40-41 0.07658180566439866 42-43 0.07693274838810481 44-45 0.06922726684586107 46-47 0.06658756722841916 48-49 0.058805793789717564 50-51 0.06478707847201369 52-53 0.06724367753795674 54-55 0.06854063977774034 56-57 0.07244678487638272 58-59 0.05975181330579501 60-61 0.07000544418973123 62-63 0.06532112174721871 64-65 0.05906518623767428 66-67 0.06382580057664468 68-69 0.06680118453850116 70-71 0.062116862095988636 72-73 0.057081596929769954 74-75 0.06040792361533259 76-77 0.0700207025690228 78-79 0.06338330757718909 80-81 0.0615370436829089 82-83 0.06620610774612987 84-85 0.06762513702024604 86-87 0.061582818820783626 88-89 0.06037740685674945 90-91 0.06365795840443739 92-93 0.057752965618599106 94-95 0.06692325157283374 96-97 0.05361794483058316 98-99 0.052748217210963566 100-101 0.05114608738534854 102-103 0.048964139146653776 104-105 0.04710261687308202 106-107 0.0583022672730957 108-109 0.05801235806655583 110-111 0.06556525581588385 112-113 0.06579413150525742 114-115 0.06847960626057406 116-117 0.07183644970471983 118-119 0.0642377768175171 120-121 0.06582464826384057 122-123 0.06388683409381096 124-125 0.07523906828674035 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 3276888.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.74700098385656 #Duplication Level Percentage of deduplicated Percentage of total 1 69.80640493935391 35.42465700136883 2 14.291355218790178 14.504868346971774 3 6.120627087855332 9.31810406547641 4 3.225748857058461 6.547883216912795 5 1.9064102004396288 4.837230015867202 6 1.1734934720162196 3.573076462737381 7 0.7715637017993979 2.740818075402544 8 0.5473592885342661 2.222147388301714 9 0.38348497152976013 1.7514641004763452 >10 1.6821041224573543 14.012514026004407 >50 0.06512365054792905 2.225821306783922 >100 0.02517956461625136 2.215632150298467 >500 6.628513177526689E-4 0.233904448213058 >1k 4.8207368349955065E-4 0.39187939518519216 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.051675858314352E-5 2 0.0 6.103351716628704E-5 0.0 0.0 3.051675858314352E-5 3 0.0 6.103351716628704E-5 0.0 0.0 3.051675858314352E-5 4 0.0 9.155027574943056E-5 0.0 0.0 3.051675858314352E-5 5 0.0 9.155027574943056E-5 0.0 0.0 3.051675858314352E-5 6 0.0 9.155027574943056E-5 0.0 0.0 9.155027574943056E-5 7 0.0 9.155027574943056E-5 0.0 0.0 9.155027574943056E-5 8 0.0 9.155027574943056E-5 0.0 0.0 1.2206703433257408E-4 9 0.0 1.525837929157176E-4 0.0 0.0 1.2206703433257408E-4 10-11 0.0 1.525837929157176E-4 0.0 0.0 1.2206703433257408E-4 12-13 0.0 1.525837929157176E-4 0.0 0.0 1.2206703433257408E-4 14-15 0.0 3.6620110299772225E-4 0.0 0.0 1.8310055149886112E-4 16-17 0.0 3.6620110299772225E-4 0.0 1.525837929157176E-5 2.4413406866514816E-4 18-19 0.0 3.6620110299772225E-4 0.0 4.577513787471528E-5 2.7465082724829166E-4 20-21 0.0 3.81459482289294E-4 0.0 7.62918964578588E-5 2.7465082724829166E-4 22-23 0.0 4.42492999455581E-4 0.0 2.593924479567199E-4 3.6620110299772225E-4 24-25 0.0 4.8826813733029626E-4 0.0 6.713686888291574E-4 4.577513787471528E-4 26-27 0.0 5.187848959134398E-4 0.0 0.0012359287226173126 4.577513787471528E-4 28-29 0.0 5.187848959134398E-4 0.0 0.004653805683929387 4.577513787471528E-4 30-31 0.0 5.187848959134398E-4 0.0 0.016967317772227798 4.7300975803872455E-4 32-33 0.0 5.187848959134398E-4 0.0 0.048826813733029634 5.187848959134398E-4 34-35 0.0 6.408519302460139E-4 0.0 0.09991186760121189 5.187848959134398E-4 36-37 0.0 7.62918964578588E-4 0.0 0.18249021632719825 5.187848959134398E-4 38-39 0.0 7.62918964578588E-4 0.0 0.3100960423426129 5.187848959134398E-4 40-41 0.0 7.934357231617314E-4 0.0 0.4521820703057291 5.187848959134398E-4 42-43 0.0 8.23952481744875E-4 0.0 0.5945885242339684 5.493016544965833E-4 44-45 0.0 9.307611367858773E-4 0.0 0.7673896697110185 5.798184130797268E-4 46-47 0.0 0.001007053033243736 0.0 0.9702193056338819 6.103351716628704E-4 48-49 0.0 0.001007053033243736 0.0 1.18542348716221 6.103351716628704E-4 50-51 0.0 0.0012511871019088843 0.0 1.4077991069575768 6.103351716628704E-4 52-53 0.0 0.0012511871019088843 0.0 1.6297474921327797 6.713686888291574E-4 54-55 0.0 0.0012511871019088843 0.0 1.8778487394137366 7.324022059954445E-4 56-57 0.0 0.0012511871019088843 0.0 2.16989411905442 7.324022059954445E-4 58-59 0.0 0.0012511871019088843 0.0 2.4832096794275547 7.62918964578588E-4 60-61 0.0 0.001266445481200456 0.0 2.811112250403432 8.392108610364467E-4 62-63 0.0 0.0013122206190751713 0.0 3.135902112003828 9.155027574943056E-4 64-65 0.0 0.0013427373776583149 0.0 3.48841644877701 9.155027574943056E-4 66-67 0.0 0.00138851251553303 0.0 3.8947776060701496 9.155027574943056E-4 68-69 0.0 0.0014342876534077455 0.0 4.347203810444544 9.155027574943056E-4 70-71 0.0 0.001464804411990889 0.0 4.837806479806451 9.155027574943056E-4 72-73 0.0 0.001464804411990889 0.0 5.3187353366975 0.0011291200675763102 74-75 0.0 0.001464804411990889 0.0 5.808163110853957 0.0011291200675763102 76-77 0.0 0.0014953211705740325 0.0 6.348294479396305 0.0011291200675763102 78-79 0.0 0.001525837929157176 0.0 6.942486285768693 0.0011291200675763102 80-81 0.0 0.001525837929157176 0.0 7.575281791748757 0.0011596368261594537 82-83 0.0 0.001541096308448748 0.0 8.22592960149996 0.0012511871019088843 84-85 0.0 0.0016173882049066064 0.0 8.878118507559611 0.0012511871019088843 86-87 0.0 0.0016326465841981783 0.0 9.565676336817127 0.0012511871019088843 88-89 0.0 0.0017394552392391805 0.0 10.316602215272539 0.001266445481200456 90-91 0.0 0.0017394552392391805 0.0 11.10810012426424 0.0012817038604920278 92-93 0.0 0.001769971997822324 0.0 11.921615874573682 0.0012817038604920278 94-95 0.0 0.0018462638942801828 0.0 12.725366262136514 0.0013732541362414584 96-97 0.0 0.0018920390321548982 0.0 13.558992556352248 0.0013732541362414584 98-99 0.0 0.0020598812043621873 0.0 14.44564171860619 0.0013732541362414584 100-101 0.0 0.002075139583653759 0.0 15.392134244441678 0.001403770894824602 102-103 0.0 0.002075139583653759 0.0 16.36166692300744 0.0014190292741161738 104-105 0.0 0.0021209147215284748 0.0 17.314339092456013 0.0014342876534077455 106-107 3.051675858314352E-5 0.002151431480111618 0.0 18.26461569635581 0.0014342876534077455 108-109 3.051675858314352E-5 0.0021972066179863333 0.0 19.248323409283444 0.0014953211705740325 110-111 3.051675858314352E-5 0.002227723376569477 0.0 20.282444807390426 0.0016021298256150346 112-113 3.051675858314352E-5 0.002288756893735764 0.0 21.350302482111076 0.0016173882049066064 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACATG 11730 0.0 29.514301 1 TACATGG 11495 0.0 29.015333 2 CATGGGG 7510 0.0 27.913317 4 ACATGGG 12065 0.0 27.249609 3 GTATCAA 10065 0.0 24.15465 1 AACGCAG 10765 0.0 21.507936 6 TCAACGC 10815 0.0 21.420609 4 CAACGCA 10895 0.0 21.26332 5 ATCAACG 11080 0.0 21.071472 3 TATCAAC 11355 0.0 20.980768 2 GGTATCA 8080 0.0 19.764135 1 ACGCAGA 12050 0.0 19.213764 7 GTACTAT 810 0.0 19.126818 1 CGCAGAG 12310 0.0 18.515589 8 ATGGGGA 4330 0.0 18.154938 5 GAGTACT 3810 0.0 18.03879 12-13 GTATAAT 1470 0.0 17.835682 1 AGAGTAC 9590 0.0 17.095163 10-11 ATGGGGC 3595 0.0 17.062672 5 ATGGGGG 3605 0.0 16.850145 5 >>END_MODULE