##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920907_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4592134 Sequences flagged as poor quality 0 Sequence length 125 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.527504859396526 31.0 30.0 34.0 25.0 34.0 2 29.661033628374085 31.0 30.0 34.0 25.0 34.0 3 29.813135243875724 31.0 30.0 34.0 25.0 34.0 4 33.21000563136877 37.0 35.0 37.0 26.0 37.0 5 33.29091180701609 37.0 35.0 37.0 27.0 37.0 6 33.258304526827835 37.0 35.0 37.0 26.0 37.0 7 33.16904297653335 37.0 35.0 37.0 26.0 37.0 8 33.067020256813066 37.0 35.0 37.0 26.0 37.0 9 34.476685131574996 39.0 35.0 39.0 25.0 39.0 10-11 34.48043817972211 39.0 35.0 39.0 26.0 39.0 12-13 34.410849400300606 39.0 35.0 39.0 25.0 39.0 14-15 35.549748983805785 40.0 36.0 41.0 25.0 41.0 16-17 35.53086495298264 40.0 36.0 41.0 25.0 41.0 18-19 35.52270306136537 40.0 36.0 41.0 25.0 41.0 20-21 35.5458616843498 40.0 36.0 41.0 25.0 41.0 22-23 35.46423296881145 40.0 36.0 41.0 25.0 41.0 24-25 35.45834583659797 40.0 35.5 41.0 25.0 41.0 26-27 35.386606531952246 40.0 35.0 41.0 25.0 41.0 28-29 35.276020364388316 40.0 35.0 41.0 25.0 41.0 30-31 35.12569776927241 40.0 35.0 41.0 24.0 41.0 32-33 34.98713724381736 40.0 35.0 41.0 24.0 41.0 34-35 34.91098332496395 39.5 35.0 41.0 24.0 41.0 36-37 34.76542267712571 39.0 34.0 41.0 23.0 41.0 38-39 34.621203562439604 39.0 34.0 41.0 22.0 41.0 40-41 34.482155681868164 39.0 34.0 41.0 20.5 41.0 42-43 34.29489720901002 39.0 33.5 41.0 19.0 41.0 44-45 34.13353149102356 39.0 33.0 41.0 18.0 41.0 46-47 33.917815660431515 38.5 33.0 41.0 16.0 41.0 48-49 33.780522846240984 38.0 33.0 40.5 15.0 41.0 50-51 33.56925538322706 38.0 33.0 40.0 13.0 41.0 52-53 33.36151198985047 38.0 33.0 40.0 10.5 41.0 54-55 33.109132268352795 38.0 32.0 40.0 8.0 41.0 56-57 32.832641316651475 37.5 32.0 40.0 7.5 41.0 58-59 32.55915376162804 37.0 31.5 40.0 6.5 41.0 60-61 32.281235586766414 37.0 31.0 40.0 2.0 41.0 62-63 31.96054318101345 36.0 31.0 39.5 2.0 41.0 64-65 31.662106441144793 36.0 31.0 39.0 2.0 41.0 66-67 31.311628319208452 35.0 30.5 39.0 2.0 40.5 68-69 30.97713339811077 35.0 30.0 38.5 2.0 40.0 70-71 30.638582410704913 35.0 30.0 37.5 2.0 40.0 72-73 30.69797037717105 35.0 30.5 37.0 2.0 39.5 74-75 30.689989120526533 35.0 31.0 37.0 2.0 39.0 76-77 30.429371399005344 35.0 31.0 36.5 2.0 39.0 78-79 30.143643565279238 35.0 31.0 36.0 2.0 38.5 80-81 29.88765658841837 35.0 30.0 36.0 2.0 37.0 82-83 29.655795540809567 35.0 30.0 35.0 2.0 37.0 84-85 29.432258292114298 35.0 30.0 35.0 2.0 36.5 86-87 29.249608134257407 35.0 30.0 35.0 2.0 36.0 88-89 29.0588836257827 34.5 30.0 35.0 2.0 36.0 90-91 28.89921298028324 34.0 30.0 35.0 2.0 36.0 92-93 28.751721313010464 34.0 29.0 35.0 2.0 35.0 94-95 28.644926737765054 34.0 29.0 35.0 2.0 35.0 96-97 28.553731119344512 34.0 29.0 35.0 2.0 35.0 98-99 28.431188745798792 34.0 29.0 35.0 2.0 35.0 100-101 28.31410951858112 34.0 29.0 35.0 2.0 35.0 102-103 26.97672084481855 32.5 26.0 34.5 2.0 35.0 104-105 27.980521474329798 34.0 29.0 35.0 2.0 35.0 106-107 28.13979894750458 34.0 29.0 35.0 2.0 35.0 108-109 28.082131096348668 34.0 29.0 35.0 2.0 35.0 110-111 27.98627609734385 34.0 29.0 35.0 2.0 35.0 112-113 27.875418487352505 34.0 29.0 35.0 2.0 35.0 114-115 27.77050745905934 34.0 29.0 35.0 2.0 35.0 116-117 27.564051266796657 34.0 27.5 35.0 2.0 35.0 118-119 27.37874003676722 34.0 27.0 35.0 2.0 35.0 120-121 27.208213980689585 34.0 27.0 35.0 2.0 35.0 122-123 26.926498878299284 34.0 27.0 35.0 2.0 35.0 124-125 25.627444669515306 32.5 21.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 192737.0 3 27790.0 4 18078.0 5 17493.0 6 22170.0 7 23069.0 8 22752.0 9 24470.0 10 26340.0 11 28208.0 12 28767.0 13 28519.0 14 28220.0 15 25453.0 16 21099.0 17 19413.0 18 18524.0 19 18643.0 20 19035.0 21 20306.0 22 24377.0 23 30548.0 24 41086.0 25 51262.0 26 58309.0 27 64990.0 28 76254.0 29 89548.0 30 106562.0 31 128936.0 32 161314.0 33 204945.0 34 276671.0 35 406395.0 36 732063.0 37 1128284.0 38 378960.0 39 544.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.308022737936746 18.064723149979507 12.307380536722283 25.319873575361463 2 16.245307140997102 20.24444959148627 38.74115134091344 24.769091926603185 3 19.081130324492502 24.30225146041914 28.896556207539426 27.720062007548936 4 12.945100063617268 16.406014699798245 35.65554902008251 34.99333621650197 5 14.072962497826719 37.53609502100858 33.97797726523593 14.412965215928777 6 33.15273552056382 35.81855893235387 16.990909939158332 14.03779560792398 7 28.303535827314352 32.340276916348905 21.140710836694087 18.215476419642656 8 25.935542121139065 35.463190188061 19.94914937241066 18.652118318389277 9 26.044316884010378 16.261550142666213 19.267492006702884 38.42664096662053 10-11 25.169412651948274 26.342942647087668 27.433144939634822 21.054499761329232 12-13 25.5371839406994 23.934529518773243 27.315955670133874 23.212330870393483 14-15 22.989283187363384 25.343338031003753 24.55860586305446 27.1087729185784 16-17 23.15871371837949 27.91118443455619 25.604067562421033 23.326034284643285 18-19 23.29056541436493 27.09565563431174 26.901684274208666 22.71209467711467 20-21 24.15166672441533 26.36239442073844 26.497134032026754 22.988804822819482 22-23 23.792888254173146 26.199234694933693 26.40773140716378 23.600145643729377 24-25 23.513277613578186 26.329659879673486 26.56897713961779 23.588085367130546 26-27 23.259988362438136 26.435658884319587 26.590510374646676 23.713842378595604 28-29 23.36287845125557 26.665222571211956 26.516937648854245 23.45496132867823 30-31 23.527991478694123 26.51638669086383 26.33813310530821 23.617488725133843 32-33 23.29046035798938 26.620600211484497 26.231225956278674 23.857713474247447 34-35 23.643802109280372 26.630972259088352 26.315968403944147 23.409257227687128 36-37 23.69949194328289 26.360423335194845 26.310429464565427 23.629655256956834 38-39 23.45694240125507 26.57563179725566 26.282632901803748 23.684792899685526 40-41 23.623672413864497 26.426965082466005 26.48641810161367 23.462944402055836 42-43 23.452322992022268 26.54132419981859 26.29878422725226 23.70756858090688 44-45 23.455375405164048 26.51974925482939 26.410506960083087 23.614368379923476 46-47 23.511955705396915 26.606299867193332 26.23305963181751 23.648684795592242 48-49 23.33466466465812 26.6741164568458 26.122616268694475 23.868602609801606 50-51 23.34072768239455 26.76818279876838 26.205751031250202 23.68533848758686 52-53 23.609034435080865 26.561498453638293 26.069539153159266 23.759927958121573 54-55 23.42165978327251 26.557818059389497 26.080017346044322 23.94050481129367 56-57 23.318958702419426 26.72660375999549 26.034531584870884 23.919905952714192 58-59 23.32506314313639 26.3977258774589 26.18384052118649 24.093370458218217 60-61 23.275827690529482 26.367190011163938 26.38406775679397 23.97291454151261 62-63 23.275325944275252 26.35632521036676 26.451986085373953 23.91636275998403 64-65 23.205687883287705 26.381578875693034 26.255908990381105 24.156824250638152 66-67 23.207781087617317 26.596448580067218 26.08133460051728 24.114435731798185 68-69 23.45651248979227 26.2620184253922 26.218142217965713 24.06332686684982 70-71 23.265143854002083 26.220090293207786 26.259192364103146 24.25557348868698 72-73 23.303809130884627 26.167741381626346 26.260583506545306 24.26786598094372 74-75 23.180107308986607 26.416427199934457 26.24813590728476 24.155329583794185 76-77 23.291215235953416 26.089216710168543 26.38154278301961 24.23802527085843 78-79 23.282984385859383 26.2242451334986 26.35603265096758 24.13673782967444 80-81 23.31816574813165 26.211232365843678 26.295156160031553 24.175445725993118 82-83 23.25940945518888 26.071135366825615 26.474496180324213 24.19495899766129 84-85 23.202496130167997 26.218671575772056 26.336517997783186 24.242314296276756 86-87 23.18969297588574 26.126035629636124 26.355983677240364 24.328287717237767 88-89 23.271377271030165 26.02310412063396 26.27102569653314 24.43449291180274 90-91 23.15813706751637 26.038940727321975 26.36548962560077 24.437432579560888 92-93 23.226565202352127 25.954477239981806 26.503092682421965 24.315864875244106 94-95 23.16010630120425 25.8248056699496 26.5656912002533 24.44939682859285 96-97 23.20464703877213 25.656182011124752 26.581345456775757 24.55782549332736 98-99 23.070986696054266 25.917463724682122 26.382396984895063 24.629152594368552 100-101 23.0776630134139 25.80125108093157 26.535325900460393 24.585760005194135 102-103 22.93949982161775 25.818540315750198 26.556961129009853 24.684998733622194 104-105 22.822667730879385 26.003758877169165 26.432327084406104 24.741246307545346 106-107 22.75164451769512 26.062567226698043 26.35038165535459 24.835406600252256 108-109 22.787848758362706 26.098111658456485 26.40101459355248 24.71302498962833 110-111 22.77571002049308 26.205023827602318 26.33768570183699 24.68158045006761 112-113 22.802747898447347 26.335864472107534 26.33734624187233 24.52404138757279 114-115 22.775777757172865 26.480783694766192 26.19928326128211 24.54415528677884 116-117 22.611511085323897 26.422901224983452 26.332845737073935 24.63274195261872 118-119 22.76220281371325 26.425721705050176 26.118944897843114 24.693130583393458 120-121 22.748365303088182 26.551842560061644 26.096565823585006 24.60322631326517 122-123 22.804809834260187 26.561536797088632 26.09012370616892 24.54352966248226 124-125 22.838011063016303 26.587655291719386 25.917911739079834 24.65642190618447 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2820.0 1 2090.5 2 1111.0 3 771.0 4 611.0 5 532.5 6 496.0 7 515.5 8 587.0 9 633.0 10 631.0 11 663.5 12 768.5 13 906.0 14 1045.0 15 1201.0 16 1376.5 17 1581.0 18 1845.5 19 2282.5 20 2886.5 21 3617.5 22 4798.0 23 6239.5 24 7884.5 25 10297.5 26 14202.5 27 19252.0 28 24065.5 29 29920.5 30 37088.0 31 45731.0 32 55437.5 33 62176.5 34 68218.0 35 75839.5 36 84577.0 37 93428.5 38 102414.5 39 111072.5 40 119352.0 41 128997.5 42 137358.0 43 147217.0 44 157017.5 45 165463.5 46 173137.5 47 177408.0 48 182128.5 49 186711.0 50 191278.0 51 193895.0 52 190507.5 53 187224.0 54 182854.0 55 173497.0 56 160757.5 57 145752.5 58 132871.5 59 118451.5 60 99789.5 61 82971.0 62 68349.0 63 51652.0 64 37150.0 65 28126.0 66 21275.0 67 16256.5 68 12303.5 69 9453.5 70 7701.5 71 5907.0 72 4528.0 73 3856.5 74 3047.5 75 2241.0 76 1654.0 77 1142.5 78 772.0 79 532.5 80 357.5 81 234.0 82 166.0 83 114.0 84 78.0 85 62.5 86 54.5 87 38.5 88 29.5 89 25.5 90 22.0 91 17.5 92 14.0 93 15.5 94 18.0 95 17.0 96 11.5 97 9.5 98 8.0 99 11.5 100 22.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.17205508375844433 2 0.1519119433361483 3 0.1780435849650729 4 0.1502787157343405 5 0.17536509169810813 6 0.11206118985203829 7 0.11142967517933929 8 0.09973576555039552 9 0.10568071402097587 10-11 0.09198337853381457 12-13 0.08089920720954571 14-15 0.08034390982493107 16-17 0.07918976231965356 18-19 0.07774163384605066 20-21 0.07149181622313286 22-23 0.062127977972768214 24-25 0.06614571787321537 26-27 0.07717544827742395 28-29 0.07258063462433804 30-31 0.06894398116431272 32-33 0.07878689951120764 34-35 0.07534623336339924 36-37 0.07777429839808682 38-39 0.07359323573745888 40-41 0.07920065050366562 42-43 0.07865624130306302 44-45 0.07081674881438564 46-47 0.06821447283550523 48-49 0.059732577490116796 50-51 0.06628726426537206 52-53 0.06830157830760165 54-55 0.06949927854892736 56-57 0.07357145936943478 58-59 0.060091887562514504 60-61 0.07079497244636154 62-63 0.0654597622804561 64-65 0.05942770833777934 66-67 0.06436005569523885 68-69 0.06721275990639645 70-71 0.062345741653009254 72-73 0.05710852514321229 74-75 0.0603205394267676 76-77 0.07080586063037358 78-79 0.06377209375858806 80-81 0.062095313420732066 82-83 0.06677723254591439 84-85 0.06773539273897496 86-87 0.06176866790037051 88-89 0.06052741492299659 90-91 0.06377209375858806 92-93 0.05817556717639338 94-95 0.0674740763226857 96-97 0.05353720078725926 98-99 0.05319966708288565 100-101 0.051022030280475264 102-103 0.049465019966751844 104-105 0.04789712146901637 106-107 0.059199056473526246 108-109 0.05901395734532137 110-111 0.06584084872087792 112-113 0.06591706600896229 114-115 0.06867177656401141 116-117 0.07178579719145826 118-119 0.06461048392751606 120-121 0.0665703570496854 122-123 0.0643056147751786 124-125 0.07647860450065264 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 4592134.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.92312735690594 #Duplication Level Percentage of deduplicated Percentage of total 1 68.60623700484605 30.820067224467717 2 13.843212575837406 12.43760803146131 3 6.200145702125998 8.355898050239375 4 3.4010550919820295 6.111441241798486 5 2.0422818815016166 4.58728445306993 6 1.353095397831548 3.647116612969796 7 0.929383386971473 2.9225565779418448 8 0.6353873015582727 2.2834867735090465 9 0.48322162349451053 1.9537043880469267 >10 2.342027080390143 17.94937702500058 >50 0.11184943073108136 3.4136898113644327 >100 0.048348508371265204 3.80266143941013 >500 0.002340788451324852 0.7182999116415262 >1k 0.0014142259073382849 0.9968084590788674 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 1.0888184012051913E-5 0.0 12-13 0.0 0.0 0.0 2.1776368024103826E-5 2.6131641628924596E-4 14-15 0.0 0.0 0.0 2.1776368024103826E-5 3.0486915233745356E-4 16-17 0.0 0.0 0.0 2.1776368024103826E-5 3.484218883856612E-4 18-19 0.0 0.0 0.0 3.266455203615574E-5 3.484218883856612E-4 20-21 0.0 0.0 0.0 4.355273604820765E-5 4.028628084459208E-4 22-23 0.0 0.0 0.0 1.5243457616872678E-4 4.137509924579727E-4 24-25 0.0 0.0 0.0 4.1375099245797274E-4 4.137509924579727E-4 26-27 0.0 0.0 0.0 8.166138009038934E-4 4.246391764700246E-4 28-29 0.0 0.0 0.0 0.0025369468748080957 4.3552736048207654E-4 30-31 0.0 0.0 0.0 0.010278445707377007 4.3552736048207654E-4 32-33 0.0 0.0 0.0 0.03143418724279387 4.3552736048207654E-4 34-35 0.0 0.0 0.0 0.06679900891393849 4.5730372850618034E-4 36-37 0.0 0.0 0.0 0.12891609870269466 4.5730372850618034E-4 38-39 0.0 0.0 0.0 0.23319223698611585 5.008564645543881E-4 40-41 0.0 0.0 0.0 0.35486769332079593 5.226328325784918E-4 42-43 0.0 0.0 0.0 0.4732440298998244 5.335210165905437E-4 44-45 0.0 0.0 0.0 0.6190477020052115 5.552973846146476E-4 46-47 0.0 0.0 0.0 0.7985394154438873 5.661855686266995E-4 48-49 0.0 0.0 0.0 0.9846293683938666 5.879619366508033E-4 50-51 0.0 0.0 0.0 1.1813679653076326 5.879619366508033E-4 52-53 0.0 0.0 0.0 1.3791627160705677 6.424028567110629E-4 54-55 0.0 0.0 0.0 1.6022616064775113 6.641792247351667E-4 56-57 0.0 0.0 0.0 1.8673671108029513 6.968437767713224E-4 58-59 0.0 0.0 0.0 2.151810029933795 7.186201447954263E-4 60-61 0.0 0.0 0.0 2.4515072948655243 7.186201447954263E-4 62-63 0.0 0.0 0.0 2.751150118877193 7.4039651281953E-4 64-65 0.0 0.0 0.0 3.0725148699929052 7.621728808436339E-4 66-67 0.0 0.0 0.0 3.4597313580135074 7.621728808436339E-4 68-69 0.0 0.0 0.0 3.8893246582090155 7.621728808436339E-4 70-71 0.0 0.0 0.0 4.349470202742342 7.730610648556858E-4 72-73 0.0 0.0 0.0 4.8143847718729464 8.275019849159455E-4 74-75 0.0 0.0 0.0 5.291494107097049 8.928310889882568E-4 76-77 0.0 0.0 0.0 5.8238174234462665 9.146074570123607E-4 78-79 0.0 0.0 0.0 6.408893991333876 9.254956410244126E-4 80-81 0.0 0.0 0.0 7.030173771061559 9.581601930605684E-4 82-83 0.0 0.0 0.0 7.667056318478512 0.0010670420331810875 84-85 0.0 0.0 0.0 8.306519365506322 0.0010670420331810875 86-87 0.0 0.0 0.0 8.984602801224877 0.0010997065852172434 88-89 0.0 0.0 0.0 9.721852628864925 0.001132371137253399 90-91 0.0 0.0 0.0 10.513608705669304 0.001132371137253399 92-93 0.0 0.0 0.0 11.31628563103777 0.001263029345398022 94-95 0.0 0.0 0.0 12.122446775290094 0.0012848057134221258 96-97 0.0 2.1776368024103826E-5 0.0 12.953258768145703 0.0013283584494703333 98-99 0.0 2.1776368024103826E-5 0.0 13.839916256799127 0.0013501348174944372 100-101 0.0 2.1776368024103826E-5 0.0 14.781951049337845 0.0013501348174944372 102-103 0.0 2.1776368024103826E-5 0.0 15.748832677792068 0.0013827993695305929 104-105 0.0 2.1776368024103826E-5 0.0 16.719285630602243 0.0014372402895908526 106-107 0.0 2.1776368024103826E-5 0.0 17.6877351575542 0.0014372402895908526 108-109 0.0 2.1776368024103826E-5 0.0 18.69890991856945 0.0014590166576149565 110-111 0.0 2.1776368024103826E-5 0.0 19.745689041304107 0.0014590166576149565 112-113 0.0 2.1776368024103826E-5 0.0 20.832351582074914 0.00148079302563906 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 10290 0.0 35.906235 1 GGTATCA 7120 0.0 32.9769 1 TCAACGC 12020 0.0 29.981604 4 AACGCAG 12095 0.0 29.676794 6 CAACGCA 12295 0.0 29.214115 5 ATCAACG 12425 0.0 29.005287 3 TATCAAC 12700 0.0 28.84658 2 GTACATG 17370 0.0 27.652142 1 TACATGG 17235 0.0 26.92459 2 ACATGGG 17315 0.0 26.180643 3 CATGGGG 11220 0.0 25.642376 4 ACGCAGA 13945 0.0 25.522425 7 CGCAGAG 14180 0.0 24.928299 8 GCAGAGT 16305 0.0 20.510855 9 AGAGTAC 13775 0.0 20.1073 10-11 ATGGGGA 6995 0.0 18.649206 5 CAGAGTA 15045 0.0 18.17268 10-11 GAGTACT 5735 0.0 17.118818 12-13 GTATAGG 1145 0.0 16.654747 1 GTATTAG 1400 0.0 16.600842 1 >>END_MODULE