FastQCFastQC Report
Mon 15 Aug 2016
SRR2920905_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR2920905_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5090306
Sequences flagged as poor quality0
Sequence length125
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATCAA106300.039.131741
GGTATCA71450.037.116311
TCAACGC124100.032.158534
CAACGCA124750.031.9432265
ATCAACG125550.031.9313453
AACGCAG126050.031.8303226
GTACATG184250.030.9859641
TATCAAC132150.030.5619742
TACATGG183600.030.043962
ACATGGG190350.028.102333
CATGGGG125550.027.6595484
ACGCAGA144400.027.4938537
CGCAGAG151200.026.1765638
GCAGAGT169300.021.9715989
AGAGTAC144950.020.46686610-11
CAGAGTA160050.019.3353510-11
ATGGGGA77650.018.5638085
ATGGGGG69600.018.3146115
GTATAGA18900.018.2882921
GAGTACT60400.017.83257112-13
Produced by FastQC (version 0.11.5)