##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920904_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2650280 Sequences flagged as poor quality 0 Sequence length 125 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.039988227658963 31.0 30.0 34.0 22.0 34.0 2 29.139906349517787 31.0 30.0 34.0 22.0 34.0 3 29.29709389196613 31.0 30.0 34.0 22.0 34.0 4 32.638296708272335 37.0 35.0 37.0 23.0 37.0 5 32.75124967927917 37.0 35.0 37.0 25.0 37.0 6 32.71468637276062 37.0 35.0 37.0 24.0 37.0 7 32.63412771480749 37.0 33.0 37.0 23.0 37.0 8 32.510496249452885 37.0 33.0 37.0 22.0 37.0 9 33.84932007184147 39.0 34.0 39.0 19.0 39.0 10-11 33.86895705359434 39.0 34.0 39.0 21.5 39.0 12-13 33.7992746049474 39.0 34.0 39.0 20.0 39.0 14-15 34.879728179664035 40.0 34.0 41.0 19.0 41.0 16-17 34.858670970614426 40.0 34.0 41.0 19.0 41.0 18-19 34.85264330561299 40.0 34.0 41.0 19.0 41.0 20-21 34.87874507599197 40.0 34.0 41.0 20.0 41.0 22-23 34.78941602396728 39.5 34.0 41.0 20.5 41.0 24-25 34.79163918529363 39.0 34.0 41.0 22.0 41.0 26-27 34.70391713328404 39.0 34.0 41.0 20.5 41.0 28-29 34.58001513047678 39.0 34.0 41.0 19.0 41.0 30-31 34.413084843865555 39.0 34.0 41.0 18.0 41.0 32-33 34.25562261345971 39.0 34.0 41.0 16.5 41.0 34-35 34.16514858807371 39.0 33.5 41.0 16.0 41.0 36-37 34.01739929365954 39.0 33.0 41.0 15.5 41.0 38-39 33.87415310835082 39.0 33.0 41.0 14.0 41.0 40-41 33.737020994008176 39.0 33.0 41.0 9.0 41.0 42-43 33.55443707834644 39.0 33.0 41.0 9.0 41.0 44-45 33.40323154534615 38.0 33.0 41.0 8.0 41.0 46-47 33.20064049836244 38.0 32.0 40.5 6.0 41.0 48-49 33.076228738095594 38.0 32.0 40.0 2.0 41.0 50-51 32.89123488838915 38.0 32.0 40.0 2.0 41.0 52-53 32.70008018020737 38.0 32.0 40.0 2.0 41.0 54-55 32.46841616734835 38.0 31.0 40.0 2.0 41.0 56-57 32.215605332266776 38.0 31.0 40.0 2.0 41.0 58-59 31.954791946511314 37.0 31.0 40.0 2.0 41.0 60-61 31.701273450352417 37.0 31.0 40.0 2.0 41.0 62-63 31.402334093001492 36.0 30.0 40.0 2.0 41.0 64-65 31.128739416212625 36.0 30.0 39.0 2.0 41.0 66-67 30.78307442987156 35.5 29.5 39.0 2.0 41.0 68-69 30.46104373877477 35.0 29.0 39.0 2.0 40.0 70-71 30.121818260712075 35.0 29.0 38.0 2.0 40.0 72-73 30.159726708121404 35.0 29.5 38.0 2.0 40.0 74-75 30.145837232292436 35.0 30.0 37.0 2.0 39.5 76-77 29.8674660790558 35.0 30.0 37.0 2.0 39.0 78-79 29.560945824592118 35.0 30.0 36.0 2.0 39.0 80-81 29.267378352475966 35.0 29.0 36.0 2.0 38.0 82-83 29.014130582429026 35.0 29.0 35.5 2.0 37.0 84-85 28.765709660866023 35.0 29.0 35.0 2.0 37.0 86-87 28.5491512217577 34.0 29.0 35.0 2.0 36.0 88-89 28.332888411790453 34.0 29.0 35.0 2.0 36.0 90-91 28.146840711170142 34.0 29.0 35.0 2.0 36.0 92-93 27.977425781426867 34.0 29.0 35.0 2.0 35.5 94-95 27.855237559805 34.0 28.0 35.0 2.0 35.0 96-97 27.75481628356249 34.0 28.0 35.0 2.0 35.0 98-99 27.619847714203782 34.0 27.0 35.0 2.0 35.0 100-101 27.49096623752962 34.0 27.0 35.0 2.0 35.0 102-103 26.193548606185008 32.0 24.5 34.0 2.0 35.0 104-105 27.16709781607981 34.0 26.5 35.0 2.0 35.0 106-107 27.319108169702822 34.0 27.0 35.0 2.0 35.0 108-109 27.25327210709812 34.0 27.0 35.0 2.0 35.0 110-111 27.156458562868828 34.0 26.5 35.0 2.0 35.0 112-113 27.03569151184026 34.0 25.5 35.0 2.0 35.0 114-115 26.92537712996363 34.0 25.0 35.0 2.0 35.0 116-117 26.707059631435172 34.0 25.0 35.0 2.0 35.0 118-119 26.509012255308875 34.0 25.0 35.0 2.0 35.0 120-121 26.315972463286897 34.0 24.5 35.0 2.0 35.0 122-123 26.014396592058198 34.0 23.5 35.0 2.0 35.0 124-125 24.74809793682177 32.5 10.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 134301.0 3 18815.0 4 12258.0 5 12601.0 6 16831.0 7 17064.0 8 15314.0 9 16008.0 10 17149.0 11 18381.0 12 18448.0 13 18617.0 14 18545.0 15 16701.0 16 13946.0 17 12637.0 18 12251.0 19 11978.0 20 12205.0 21 12924.0 22 15033.0 23 18874.0 24 25308.0 25 31284.0 26 35263.0 27 38776.0 28 45135.0 29 52781.0 30 61750.0 31 74574.0 32 91178.0 33 114826.0 34 151400.0 35 217398.0 36 378321.0 37 626004.0 38 244992.0 39 409.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.355143376687586 19.454757735409185 12.56321995915672 24.62687892874651 2 15.75716487275591 21.490763645928045 38.811355564675644 23.9407159166404 3 18.78897864653401 25.3639456000883 29.74989028617825 26.09718546719944 4 12.50512985427813 17.476950610556578 36.80163127476595 33.21628826039934 5 13.185082315337635 38.62875053202387 34.65590245989693 13.53026469274157 6 31.519762177720782 37.521261787708866 17.220206583552265 13.738769451018094 7 26.68524598585474 33.711681098501614 21.700483646522535 17.902589269121112 8 24.73639365214613 36.524105090535244 20.52069382535319 18.218807431965427 9 25.250509631150557 16.86245492450811 20.074160444766257 37.81287499957507 10-11 23.9357299735881 27.4861827072018 28.35284500556015 20.22524231364995 12-13 24.44030241747818 25.376563306268974 27.911763245397285 22.271371030855562 14-15 22.117286857330154 26.897417897727166 25.25773254270557 25.727562702237112 16-17 21.915633057933004 29.261947382859827 26.492090587380773 22.330328971826393 18-19 21.982725417666686 28.532797086717288 27.918927879336202 21.565549616279824 20-21 23.00398123863946 27.81554450159378 27.465354841486743 21.71511941828002 22-23 22.60648258614805 27.61787309679933 27.171389242102528 22.60425507495009 24-25 22.234700635134228 27.717820985934317 27.461928569864387 22.585549809067068 26-27 22.241947765092636 27.664737180059635 27.509372569772943 22.583942485074786 28-29 22.240352727372958 27.92374690897228 27.579632312600367 22.256268051054395 30-31 22.524237936252174 27.881513281662233 27.37352427286191 22.22072450922368 32-33 22.133876085275745 28.048047140876037 27.352790965294776 22.46528580855344 34-35 22.360670371147943 27.90053256323622 27.40580457678139 22.332992488834446 36-37 22.41557242038693 27.72920264960279 27.359429599818142 22.495795330192134 38-39 22.247218672877263 27.958737732104506 27.329861771893416 22.46418182312481 40-41 22.405361316804054 27.912756822481434 27.44540693217734 22.236474928537174 42-43 22.231563882702897 27.88758162283712 27.418060914213537 22.462793580246448 44-45 22.322749266027557 27.976437365450973 27.30109398755225 22.39971938096922 46-47 22.27850529182935 27.903823158393926 27.19871158085827 22.618959968918457 48-49 22.07541805900113 27.867007157017575 27.38753190681266 22.670042877168633 50-51 21.936900218117948 28.09562680498549 27.219983485409276 22.747489491487283 52-53 22.1095817948032 27.93994630538496 27.022236955948404 22.928234943863433 54-55 22.16129148576707 27.82497408393238 27.049276115287658 22.96445831501289 56-57 22.10893157835415 27.872160425895288 27.042115460170397 22.976792535580167 58-59 22.037407202626028 27.59297009926891 27.217108525664052 23.15251417244101 60-61 22.070000220885206 27.49552613062547 27.25343972071048 23.181033927778845 62-63 22.01092825200827 27.38343801962434 27.303941631414645 23.301692096952745 64-65 21.938185602514725 27.36031505034791 27.30126765027403 23.400231696863333 66-67 21.99071395332813 27.51410888215367 27.14406398103147 23.35111318348673 68-69 22.11222499066453 27.22768464123668 27.220076564063973 23.44001380403481 70-71 21.8967758133617 27.02168366744977 27.545629334161426 23.535911185027103 72-73 21.978145193700012 26.88117768068138 27.593122846783984 23.54755427883462 74-75 21.749181253465125 27.0819777223924 27.552734563402193 23.61610646074028 76-77 21.766576700941243 26.92877553979435 27.727403851962833 23.577243907301572 78-79 21.92756154995373 26.926370364049824 27.67319295588157 23.47287513011488 80-81 21.856853356288443 26.772947325002665 27.728114065763755 23.642085252945137 82-83 21.88608575897362 26.68582825739963 27.726953939500344 23.701132044126403 84-85 21.9672548954828 26.6607450478811 27.588236682257328 23.783763374378772 86-87 21.91383258651183 26.555332781232238 27.707458405059597 23.823376227196334 88-89 21.97733679817903 26.420027341725127 27.715871074818242 23.886764785277602 90-91 21.957588255859875 26.426599501775648 27.752636670006787 23.863175572357687 92-93 21.998696004427696 26.355943977269554 27.730198257161216 23.915161761141537 94-95 21.74032882157669 26.3163925983429 27.850739742826853 24.092538837253556 96-97 21.797148524240868 26.29509746405454 27.805059810319406 24.10269420138519 98-99 21.725982839384248 26.36796790765523 27.69110514123833 24.214944111722193 100-101 21.642760176554173 26.55230485342772 27.712753668270835 24.09218130174727 102-103 21.484009512392667 26.576884447909947 27.778372349507762 24.160733690189623 104-105 21.33909172294724 26.60439044176784 27.72179133708531 24.334726498199608 106-107 21.209833065025204 26.75178653948962 27.75943332115124 24.27894707433394 108-109 21.15556397898137 26.809492814960407 27.712011712924618 24.322931493133606 110-111 21.1319835017791 26.955539076800395 27.66868992889635 24.24378749252415 112-113 21.110229697748633 27.037908661579053 27.61462610873075 24.237235531941565 114-115 21.01002885073924 27.14521916329458 27.542261367836918 24.302490618129262 116-117 20.96762378585421 27.05517443976734 27.60071878336966 24.37648299100879 118-119 21.064820889027747 26.925743821896177 27.538867708676484 24.470567580399592 120-121 21.017586929361173 27.087057924463686 27.578090399059697 24.317264747115445 122-123 21.152512718533277 27.004199017932333 27.443356299593503 24.399931963940887 124-125 21.070263728524914 27.12330396513199 27.325265810070526 24.481166496272568 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 3091.0 1 2114.5 2 931.5 3 651.0 4 506.0 5 417.0 6 379.0 7 394.5 8 457.5 9 519.0 10 556.5 11 584.5 12 627.5 13 702.0 14 813.5 15 954.5 16 1167.5 17 1399.5 18 1682.5 19 2067.5 20 2549.5 21 3303.5 22 4286.5 23 5516.0 24 7192.5 25 9327.5 26 12694.5 27 16928.5 28 20408.0 29 24697.0 30 29866.0 31 34901.0 32 40682.0 33 46415.5 34 52031.5 35 57237.5 36 63863.0 37 70845.0 38 75394.5 39 78061.0 40 81565.5 41 86341.5 42 89991.0 43 94350.0 44 98689.0 45 101297.5 46 104075.5 47 106407.5 48 107772.0 49 108559.5 50 109568.0 51 107480.0 52 99698.0 53 93579.0 54 88231.5 55 80594.0 56 72328.0 57 63759.0 58 57191.0 59 50593.5 60 41890.0 61 33126.5 62 25864.0 63 19270.5 64 13778.5 65 10283.0 66 7592.0 67 5628.5 68 4168.5 69 3011.0 70 2238.0 71 1678.0 72 1222.5 73 904.0 74 711.0 75 554.5 76 416.0 77 283.0 78 192.5 79 143.5 80 105.5 81 80.5 82 66.0 83 46.5 84 33.0 85 29.5 86 28.5 87 22.0 88 16.5 89 14.0 90 10.5 91 9.5 92 12.5 93 10.0 94 7.5 95 11.0 96 11.0 97 12.0 98 13.0 99 12.5 100 18.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.17194409647282552 2 0.1549270265783238 3 0.17964139638075977 4 0.15115384034894425 5 0.17816985375130176 6 0.11036569720935145 7 0.10912054575365623 8 0.09742366844257964 9 0.10478138158986974 10-11 0.09132997268213171 12-13 0.07872753067600405 14-15 0.07882186033173853 16-17 0.0782747483284785 18-19 0.07531279713841557 20-21 0.0701058001418718 22-23 0.05976726987337187 24-25 0.06437055707321492 26-27 0.07521846748268107 28-29 0.07127548787297945 30-31 0.06782302247309718 32-33 0.07725598804654603 34-35 0.07380352264666375 36-37 0.07674660790557979 38-39 0.07184146580738639 40-41 0.07735031770228051 42-43 0.07725598804654603 44-45 0.06978507931237454 46-47 0.06652127322396124 48-49 0.05852211841767662 50-51 0.06463468010927148 52-53 0.06729477640098404 54-55 0.06891724647961725 56-57 0.07280362829587816 58-59 0.059069230420936654 60-61 0.06963415186319936 62-63 0.06535158549285358 64-65 0.058880571109467685 66-67 0.0634838583093107 68-69 0.06712498302066197 70-71 0.061408605883151966 72-73 0.05586202212596405 74-75 0.05910696228323046 76-77 0.07033219131563458 78-79 0.06259715954540652 80-81 0.06159726519462095 82-83 0.06612508866987639 84-85 0.06763436316162821 86-87 0.06076716422415744 88-89 0.05965407428649048 90-91 0.06316313747981345 92-93 0.05652232971610547 94-95 0.0676154972304813 96-97 0.0530509983850763 98-99 0.05373017190636461 100-101 0.05086255037203616 102-103 0.04959853298519402 104-105 0.048126990355736 106-107 0.05976726987337187 108-109 0.059691806148784284 110-111 0.06610622273872949 112-113 0.06625715018790466 114-115 0.06870972123700138 116-117 0.07229424815491194 118-119 0.06461581417812458 120-121 0.06712498302066197 122-123 0.0635593220338983 124-125 0.0757467135547942 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 2650280.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.0526575174566 #Duplication Level Percentage of deduplicated Percentage of total 1 70.45734754928483 36.67492181571334 2 13.85437857390301 14.423144460491244 3 5.947420613393157 9.28737144903647 4 3.2500544138526126 6.7669587726947285 5 1.892266086516663 4.924873926667488 6 1.2267568417859578 3.8313572245608696 7 0.8165450266161387 2.9752337032622647 8 0.5483933322252708 2.2836264245743054 9 0.3942183748281636 1.846810264681686 >10 1.5476507051235864 12.781988475208456 >50 0.04485748585050951 1.6005734890256929 >100 0.01857992263506532 1.6796097122526876 >500 0.001020715989945401 0.3648959794490412 >1k 5.103579949619291E-4 0.5586343023818333 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3825 0.1443243732737673 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 3.773186229379537E-5 7 0.0 0.0 0.0 0.0 3.773186229379537E-5 8 0.0 0.0 0.0 0.0 3.773186229379537E-5 9 0.0 0.0 0.0 0.0 3.773186229379537E-5 10-11 0.0 0.0 0.0 0.0 3.773186229379537E-5 12-13 0.0 0.0 0.0 0.0 7.546372458759074E-5 14-15 1.8865931146897685E-5 0.0 0.0 1.8865931146897685E-5 9.432965573448842E-5 16-17 3.773186229379537E-5 0.0 0.0 7.546372458759074E-5 1.5092744917518148E-4 18-19 3.773186229379537E-5 0.0 0.0 1.3206151802828378E-4 1.8865931146897687E-4 20-21 3.773186229379537E-5 0.0 0.0 2.2639117376277223E-4 2.2639117376277223E-4 22-23 3.773186229379537E-5 0.0 0.0 5.093801409662375E-4 2.2639117376277223E-4 24-25 3.773186229379537E-5 0.0 0.0 8.301009704634983E-4 2.2639117376277223E-4 26-27 3.773186229379537E-5 0.0 0.0 0.0017167997343676895 3.207208294972606E-4 28-29 3.773186229379537E-5 0.0 0.0 0.005357924445718943 3.3958676064415835E-4 30-31 3.773186229379537E-5 0.0 0.0 0.019790361773095674 3.3958676064415835E-4 32-33 3.773186229379537E-5 0.0 0.0 0.05978613580451877 3.3958676064415835E-4 34-35 3.773186229379537E-5 0.0 0.0 0.12809967248743528 3.7731862293795374E-4 36-37 3.773186229379537E-5 0.0 0.0 0.24495525001131957 3.7731862293795374E-4 38-39 3.773186229379537E-5 0.0 0.0 0.41972923615617974 3.7731862293795374E-4 40-41 3.773186229379537E-5 0.0 0.0 0.6150670872511583 3.7731862293795374E-4 42-43 3.773186229379537E-5 0.0 0.0 0.7942745672155395 4.1505048523174913E-4 44-45 3.773186229379537E-5 0.0 0.0 1.020609143184871 4.5278234752554446E-4 46-47 3.773186229379537E-5 0.0 0.0 1.2940896810903 4.5278234752554446E-4 48-49 3.773186229379537E-5 0.0 0.0 1.5728338137857132 4.905142098193398E-4 50-51 3.773186229379537E-5 0.0 0.0 1.8527665001433813 4.905142098193398E-4 52-53 3.773186229379537E-5 0.0 0.0 2.1356611376911117 4.905142098193398E-4 54-55 3.773186229379537E-5 0.0 0.0 2.456872481398192 5.282460721131352E-4 56-57 3.773186229379537E-5 0.0 0.0 2.8379454246343783 5.282460721131352E-4 58-59 3.773186229379537E-5 0.0 0.0 3.238544606607604 5.282460721131352E-4 60-61 3.773186229379537E-5 0.0 0.0 3.644746970131458 5.282460721131352E-4 62-63 3.773186229379537E-5 0.0 0.0 4.052873658632295 5.659779344069306E-4 64-65 3.773186229379537E-5 0.0 0.0 4.484695956653637 5.659779344069306E-4 66-67 3.773186229379537E-5 0.0 0.0 4.9892652851774155 5.659779344069306E-4 68-69 3.773186229379537E-5 0.0 0.0 5.5510172510074405 5.659779344069306E-4 70-71 3.773186229379537E-5 0.0 0.0 6.146803356626469 5.659779344069306E-4 72-73 3.773186229379537E-5 0.0 0.0 6.7211011666691824 5.848438655538283E-4 74-75 3.773186229379537E-5 0.0 0.0 7.307699563819671 6.037097967007259E-4 76-77 3.773186229379537E-5 0.0 0.0 7.969252305416786 6.037097967007259E-4 78-79 3.773186229379537E-5 0.0 0.0 8.699552500113196 6.037097967007259E-4 80-81 3.773186229379537E-5 0.0 0.0 9.45469912613007 6.414416589945214E-4 82-83 3.773186229379537E-5 0.0 0.0 10.238238978523023 6.60307590141419E-4 84-85 3.773186229379537E-5 0.0 0.0 11.011478032509773 6.791735212883167E-4 86-87 3.773186229379537E-5 0.0 0.0 11.84223931056341 6.980394524352144E-4 88-89 3.773186229379537E-5 0.0 0.0 12.74320071841466 7.16905383582112E-4 90-91 3.773186229379537E-5 0.0 0.0 13.680592239310563 7.16905383582112E-4 92-93 3.773186229379537E-5 0.0 0.0 14.638358965845118 7.546372458759075E-4 94-95 3.773186229379537E-5 0.0 0.0 15.58944715275367 7.546372458759075E-4 96-97 3.773186229379537E-5 0.0 0.0 16.56860784520881 8.301009704634983E-4 98-99 3.773186229379537E-5 0.0 0.0 17.600366753701493 8.678328327572936E-4 100-101 3.773186229379537E-5 0.0 0.0 18.717795855532245 8.678328327572936E-4 102-103 3.773186229379537E-5 0.0 0.0 19.83690402523507 8.678328327572936E-4 104-105 3.773186229379537E-5 0.0 0.0 20.947880978613583 8.678328327572936E-4 106-107 3.773186229379537E-5 0.0 0.0 22.045897037294175 8.678328327572936E-4 108-109 3.773186229379537E-5 0.0 0.0 23.183739076625866 8.678328327572936E-4 110-111 3.773186229379537E-5 0.0 0.0 24.369217592103475 8.678328327572936E-4 112-113 3.773186229379537E-5 0.0 0.0 25.583277993268638 9.055646950510889E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CATGGGG 5250 0.0 27.682497 4 TACATGG 10765 0.0 25.619732 2 GTACATG 11105 0.0 25.598875 1 ACATGGG 11095 0.0 24.749876 3 GTATCAA 8480 0.0 24.105679 1 AACGCAG 9090 0.0 21.936558 6 GGTATCA 6670 0.0 21.712084 1 CAACGCA 9620 0.0 20.803623 5 TCAACGC 9555 0.0 20.758133 4 ATCAACG 9745 0.0 20.232313 3 TATCAAC 9990 0.0 19.975004 2 GTATACG 210 7.061833E-5 19.865515 1 ACGCAGA 10005 0.0 19.451845 7 CGCAGAG 9980 0.0 19.081326 8 ATGGGGA 3230 0.0 18.993696 5 GTATAAT 1595 0.0 17.93501 1 ACCGTAT 245 2.3267427E-4 17.002825 8 GAGTACT 3770 0.0 16.965796 12-13 GTATAGC 1230 0.0 16.958366 1 GCGTAGA 795 0.0 16.492126 1 >>END_MODULE