##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920901_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3254826 Sequences flagged as poor quality 0 Sequence length 98 %GC 47 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.191584127692234 31.0 28.0 31.0 16.0 34.0 2 28.19964323745724 31.0 28.0 33.0 16.0 34.0 3 28.282170844155726 31.0 28.0 34.0 16.0 34.0 4 31.718438405002296 35.0 32.0 37.0 19.0 37.0 5 31.67277390557898 35.0 32.0 37.0 19.0 37.0 6 31.795352808414336 35.0 32.0 37.0 19.0 37.0 7 31.617910757748646 35.0 32.0 37.0 18.0 37.0 8 31.560869306070433 35.0 32.0 37.0 17.0 37.0 9 32.7841921503638 37.0 32.0 39.0 17.0 39.0 10-11 32.57367567421423 37.0 32.0 39.0 17.0 39.0 12-13 32.390605826548025 37.0 32.0 39.0 16.0 39.0 14-15 33.11047764150833 38.0 32.0 40.0 14.5 41.0 16-17 32.99184718322884 38.0 32.0 40.0 11.0 41.0 18-19 32.8780089934147 38.0 32.0 40.0 10.0 41.0 20-21 32.77562656191145 38.0 32.0 40.0 10.0 41.0 22-23 32.54934150089744 38.0 31.0 40.0 10.0 41.0 24-25 32.3525277541718 37.0 31.0 40.0 9.5 41.0 26-27 32.382504779057314 38.0 31.0 40.0 8.5 41.0 28-29 32.21515819893291 37.0 31.0 40.0 8.0 41.0 30-31 31.95938891971491 37.0 30.0 40.0 5.0 41.0 32-33 31.703419629805097 37.0 30.0 40.0 2.0 41.0 34-35 31.3684158538736 37.0 30.0 40.0 2.0 41.0 36-37 31.05351238437938 37.0 30.0 40.0 2.0 41.0 38-39 30.8397969661051 36.0 29.0 40.0 2.0 41.0 40-41 30.637207795439757 36.0 29.0 39.5 2.0 41.0 42-43 30.394830015490843 36.0 28.0 39.0 2.0 40.5 44-45 30.108644671020816 36.0 27.5 39.0 2.0 40.0 46-47 29.841958064732182 35.0 27.0 39.0 2.0 40.0 48-49 29.533438346627438 35.0 26.5 39.0 2.0 40.0 50-51 28.43173813285257 34.0 25.0 38.0 2.0 39.5 52-53 28.886350606760544 34.5 26.0 38.5 2.0 39.5 54-55 29.514164044406677 35.0 27.0 39.0 2.0 40.0 56-57 29.4520310763156 35.0 27.0 39.0 2.0 40.0 58-59 29.21122542341741 35.0 26.0 39.0 2.0 40.0 60-61 28.881711956338066 35.0 26.0 39.0 2.0 40.0 62-63 28.484748493467855 34.0 26.0 38.0 2.0 40.0 64-65 28.062461557084774 34.0 24.5 38.0 2.0 40.0 66-67 27.673691619767077 34.0 23.5 37.5 2.0 40.0 68-69 27.225597159418044 33.5 22.0 37.0 2.0 39.5 70-71 26.896176016782462 33.0 22.0 36.5 2.0 39.0 72-73 26.42861093035388 33.0 20.5 36.0 2.0 39.0 74-75 25.980568546521383 32.5 19.5 35.5 2.0 38.5 76-77 25.558177917959362 32.0 18.0 35.0 2.0 37.5 78-79 25.09607057335784 32.0 14.0 35.0 2.0 37.0 80-81 24.634368626771447 31.5 7.5 35.0 2.0 36.0 82-83 24.144253333357913 31.0 4.5 35.0 2.0 36.0 84-85 23.724062054315652 31.0 2.0 34.0 2.0 35.5 86-87 23.25426658752265 31.0 2.0 34.0 2.0 35.0 88-89 22.703310714612698 30.0 2.0 34.0 2.0 35.0 90-91 22.17780351392056 30.0 2.0 34.0 2.0 35.0 92-93 21.6149625202699 29.5 2.0 34.0 2.0 35.0 94-95 20.960380063327502 29.0 2.0 34.0 2.0 35.0 96-97 20.30340807772827 29.0 2.0 34.0 2.0 35.0 98 19.890383080385863 29.0 2.0 34.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 196330.0 3 32485.0 4 23387.0 5 18539.0 6 17333.0 7 17282.0 8 20535.0 9 23167.0 10 25355.0 11 27159.0 12 27677.0 13 27066.0 14 26339.0 15 27691.0 16 30026.0 17 31748.0 18 32693.0 19 32210.0 20 33068.0 21 34894.0 22 38560.0 23 42713.0 24 48082.0 25 54206.0 26 62618.0 27 72434.0 28 83131.0 29 94957.0 30 109944.0 31 128552.0 32 151436.0 33 182831.0 34 224630.0 35 280788.0 36 352252.0 37 377284.0 38 222230.0 39 23192.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.10390799676881 17.52314130111929 11.967069969375233 25.40588073273667 2 16.17929380078924 19.260998195765165 39.16246749012219 25.397240513323403 3 20.50371749782205 22.786640669533725 28.304547500848905 28.405094331795322 4 13.284001649510893 14.779408646657435 36.33920433838573 35.597385365445945 5 14.358751995948484 36.61331640285523 34.24829414779914 14.779637453397138 6 34.18276111199718 34.603618296209085 16.874114379118108 14.339506212675623 7 29.77337885217541 31.017936103591214 20.29557543334573 18.91310961088765 8 27.03417718796378 34.49548472734759 19.531726742274564 18.938611342414067 9 26.77676164563021 15.780567071788168 19.183483233819565 38.259188048762056 10-11 25.995905771921446 25.20809100087071 27.229535465183087 21.56646776202476 12-13 26.47083991175076 22.29580763865066 27.38525593647603 23.84809651312255 14-15 23.243762406019197 24.062941810210738 24.809488249451835 27.883807534318233 16-17 23.587431531966395 27.209896328942758 25.54575478988183 23.656917349209017 18-19 23.486795851079606 26.354480820194752 27.079181864493908 23.07954146423174 20-21 24.0652928617584 25.697214677349255 27.036166346653356 23.201326114238984 22-23 23.712827325966266 25.49436321601534 26.842409159091623 23.95040029892677 24-25 23.454641095634354 25.723547056883056 26.989452733136964 23.832359114345632 26-27 23.35089636652292 26.07614637955184 26.81517430079291 23.757782953132327 28-29 23.43011007543612 26.114165261019917 26.844163960662183 23.611560702881786 30-31 23.657895210073686 26.015870666471773 26.65135515768994 23.67487896576459 32-33 23.373932523500613 26.002436873304095 26.667168586767133 23.95646201642815 34-35 23.749631965864932 26.06782310314051 26.62794408039253 23.554600850602032 36-37 23.894002519734265 25.836403210607223 26.585451206325097 23.68414306333342 38-39 23.685707401307944 25.96702369362601 26.630581675223038 23.716687229843007 40-41 23.8130023492493 25.885615116457494 26.62111014610793 23.680272388185273 42-43 23.693854340714115 25.703880090928855 26.70801348719378 23.894252081163245 44-45 23.61713089580258 25.864897675229336 26.74306895642154 23.77490247254654 46-47 23.60541297379293 25.862608052083115 26.595601422765135 23.93637755135882 48-49 23.57576274503846 25.870872980631056 26.56168567613626 23.99167859819422 50-51 23.473418249422323 26.070378581231125 26.578820167514582 23.87738300183197 52-53 23.545171271294613 25.91705326857568 26.6438869777209 23.89388848240881 54-55 23.299161934957365 25.784960633907065 26.955263895422128 23.96061353571345 56-57 23.335199123181628 25.90969597705264 26.778908222887626 23.97619667687811 58-59 23.18806285113118 25.736060420015367 26.883975923314956 24.191900805538502 60-61 23.241382619397356 25.669188177108555 27.03654613907438 24.052883064419703 62-63 23.144120902216205 25.685072710234962 27.005279252806414 24.16552713474242 64-65 23.030547802336695 25.644786076491272 26.966057002851656 24.35860911832038 66-67 23.004292415230665 25.649249413898858 26.921090441411188 24.425367729459293 68-69 23.24644107786857 25.50282786922549 26.856650687764393 24.394080365141548 70-71 23.126083847005752 25.374039977165776 26.896753462836248 24.603122712992224 72-73 23.205166255906047 25.361725024996396 26.786808686796892 24.646300032300665 74-75 23.052776823315178 25.469568623497413 26.849482609331698 24.62817194385571 76-77 23.152806025633794 25.256789582221533 26.986236627164374 24.604167764980303 78-79 23.13367368441011 25.305666230373152 26.916602065321328 24.644058019895414 80-81 23.203000973919703 25.305276881039497 26.843937423076607 24.647784721964193 82-83 23.222726822844482 25.29526536343424 26.890245613299417 24.591762200421858 84-85 23.252428015171887 25.1183116366357 26.912538420352146 24.71672192784027 86-87 23.168681588857222 25.043923402641727 27.085748902107614 24.70164610639344 88-89 23.252689519337043 24.984119880521664 26.875376955251756 24.88781364488953 90-91 23.253110444064582 25.033769037820242 26.945418041492943 24.767702476622237 92-93 23.44031275374281 24.76512867915994 26.970924995494585 24.823633571602667 94-95 23.356637340598862 24.643902887258886 27.06788246713922 24.931577305003028 96-97 23.50968663792977 24.427696758797097 27.039178391425615 25.023438211847516 98 23.557060223726893 24.325335158668494 26.92924359591026 25.188361021694355 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 77.0 1 62.0 2 77.0 3 130.5 4 148.5 5 172.0 6 316.0 7 545.5 8 780.5 9 939.0 10 1010.5 11 1125.5 12 1284.5 13 1437.5 14 1607.5 15 1809.0 16 1933.5 17 1974.5 18 2056.5 19 2164.0 20 2243.5 21 2346.0 22 2686.5 23 3293.5 24 3994.5 25 5095.0 26 6720.0 27 8762.0 28 11631.0 29 15409.5 30 20831.0 31 28683.0 32 35990.5 33 42441.0 34 50055.5 35 58128.5 36 66880.0 37 75125.0 38 81839.5 39 88588.0 40 95525.5 41 101230.0 42 108019.0 43 116413.5 44 123605.0 45 129583.5 46 135127.5 47 139386.0 48 141912.5 49 143179.0 50 143417.0 51 141937.0 52 139127.0 53 138082.5 54 135100.5 55 127833.0 56 116883.5 57 105103.5 58 94553.5 59 82200.5 60 69273.0 61 56943.0 62 45932.5 63 35104.0 64 25336.5 65 18804.5 66 14436.5 67 11069.5 68 8352.5 69 6369.5 70 4687.5 71 3496.5 72 2768.5 73 2157.0 74 1653.5 75 1203.5 76 791.5 77 496.0 78 303.5 79 178.5 80 113.5 81 66.5 82 35.0 83 23.0 84 17.0 85 10.5 86 10.0 87 8.0 88 5.0 89 3.5 90 2.0 91 3.0 92 2.0 93 1.0 94 4.0 95 4.0 96 1.5 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.38954463310788345 2 0.025039740987690278 3 0.019079360924362777 4 0.01622206532699444 5 0.02255112869320818 6 0.023134877256111387 7 0.015238909852631138 8 0.00970866030933758 9 0.0 10-11 0.0 12-13 0.005545611347580485 14-15 0.003241340704541502 16-17 0.006298339757639887 18-19 0.037129480961501475 20-21 0.0804190454420605 22-23 0.09811584398059989 24-25 0.06559490430517637 26-27 0.07513458476735776 28-29 0.05760676607597457 30-31 0.0527677977255927 32-33 0.020154687224447635 34-35 0.34536408397868273 36-37 0.5279237661245179 38-39 0.4799488513364462 40-41 0.48908912488716755 42-43 0.43844125615317076 44-45 0.41264878675542105 46-47 0.41143520421675384 48-49 0.40138858421310386 50-51 0.39814724350856234 52-53 0.45936403359196465 54-55 0.46030110365346716 56-57 0.43068354498827277 58-59 0.4152602934841985 60-61 0.4294392388410317 62-63 0.41057494317668597 64-65 0.4594101190048255 66-67 0.48002566035788086 68-69 0.4234174115605565 70-71 0.3786684756727395 72-73 0.364335912273037 74-75 0.34688490260308846 76-77 0.34462671737291023 78-79 0.34454990835147564 80-81 0.36086414450419163 82-83 0.3550727442880203 84-85 0.3561019851752444 86-87 0.34137001486408186 88-89 0.38602677992617734 90-91 0.36378288731870767 92-93 0.3535519256636146 94-95 0.36100240074277395 96-97 0.3602189487241407 98 0.35596372893666206 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 3254826.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.7811858646498 #Duplication Level Percentage of deduplicated Percentage of total 1 72.6893140793235 36.185602545567086 2 11.602613212551779 11.551836896993633 3 5.41420418368066 8.085765143309144 4 3.034771044738962 6.042980057392308 5 1.8492795666411246 4.602966491133042 6 1.2366465763243517 3.6937039838931236 7 0.8546770839408451 2.9782787138941273 8 0.6315569001773377 2.5151721145464103 9 0.46299901391468223 2.0743775970152734 >10 2.128945804346503 17.46005116891092 >50 0.06956001868048 2.3358931037139685 >100 0.024375249189027275 1.9853498922201425 >500 7.463057585655093E-4 0.25764902059033634 >1k 3.109607322261778E-4 0.23037327082049233 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 6.144721714770621E-5 0.0 5 0.0 0.0 0.0 6.144721714770621E-5 0.0 6 0.0 0.0 0.0 6.144721714770621E-5 0.0 7 0.0 0.0 0.0 6.144721714770621E-5 0.0 8 0.0 0.0 0.0 9.21708257215593E-5 0.0 9 0.0 0.0 0.0 9.21708257215593E-5 0.0 10-11 0.0 0.0 0.0 1.2289443429541242E-4 0.0 12-13 0.0 0.0 0.0 1.2289443429541242E-4 0.0 14-15 0.0 0.0 0.0 1.2289443429541242E-4 0.0 16-17 0.0 0.0 0.0 1.2289443429541242E-4 0.0 18-19 0.0 0.0 0.0 1.2289443429541242E-4 0.0 20-21 0.0 0.0 0.0 2.1506526001697173E-4 0.0 22-23 0.0 4.608541286077966E-5 0.0 5.223013457555028E-4 0.0 24-25 0.0 7.680902143463276E-5 0.0 9.831554743632994E-4 0.0 26-27 0.0 9.21708257215593E-5 0.0 0.0016129894501272879 0.0 28-29 0.0 1.0753263000848586E-4 0.0 0.006667023060526123 0.0 30-31 0.0 1.2289443429541242E-4 0.0 0.02917206634087352 0.0 32-33 0.0 1.2289443429541242E-4 0.0 0.07175498782423392 1.5361804286926553E-5 34-35 0.0 1.3825623858233896E-4 0.0 0.12767195542864657 3.0723608573853106E-5 36-37 0.0 1.5361804286926552E-4 0.0 0.22004248460593595 3.0723608573853106E-5 38-39 0.0 1.5361804286926552E-4 0.0 0.372078261633648 3.0723608573853106E-5 40-41 0.0 1.6897984715619208E-4 0.0 0.552164693289288 3.0723608573853106E-5 42-43 0.0 1.843416514431186E-4 0.0 0.736199108646668 3.0723608573853106E-5 44-45 0.0 1.843416514431186E-4 0.0 0.9581771805927568 3.0723608573853106E-5 46-47 0.0 1.843416514431186E-4 0.0 1.2217550185478425 3.0723608573853106E-5 48-49 1.5361804286926553E-5 1.843416514431186E-4 0.0 1.5139672596937594 3.0723608573853106E-5 50-51 3.0723608573853106E-5 1.843416514431186E-4 0.0 1.8393609980994376 3.0723608573853106E-5 52-53 3.0723608573853106E-5 1.843416514431186E-4 0.0 2.172635342104309 3.0723608573853106E-5 54-55 3.0723608573853106E-5 1.9970345573004517E-4 0.0 2.5339603407371083 3.0723608573853106E-5 56-57 3.0723608573853106E-5 2.1506526001697173E-4 0.0 2.9591597215949488 3.0723608573853106E-5 58-59 3.0723608573853106E-5 2.1506526001697173E-4 0.0 3.4210584528942563 3.0723608573853106E-5 60-61 3.0723608573853106E-5 2.1506526001697173E-4 0.0 3.9217303782137662 3.0723608573853106E-5 62-63 3.0723608573853106E-5 2.4578886859082485E-4 0.0 4.427947914880857 3.0723608573853106E-5 64-65 6.144721714770621E-5 2.9187428145160444E-4 0.0 4.961079332658643 3.0723608573853106E-5 66-67 6.144721714770621E-5 3.0723608573853103E-4 0.0 5.564644623091987 3.0723608573853106E-5 68-69 6.144721714770621E-5 3.0723608573853103E-4 0.0 6.230548115321679 3.0723608573853106E-5 70-71 6.144721714770621E-5 3.0723608573853103E-4 0.0 6.942460211390717 3.0723608573853106E-5 72-73 6.144721714770621E-5 3.3795969431238415E-4 0.0 7.670701905416757 3.0723608573853106E-5 74-75 6.144721714770621E-5 3.3795969431238415E-4 0.0 8.394980253936769 3.0723608573853106E-5 76-77 6.144721714770621E-5 3.686833028862372E-4 0.0 9.170720646817987 3.0723608573853106E-5 78-79 6.144721714770621E-5 4.3013052003394346E-4 0.0 10.016418696421868 3.0723608573853106E-5 80-81 6.144721714770621E-5 4.4549232432087E-4 0.0 10.91308721264977 3.0723608573853106E-5 82-83 6.144721714770621E-5 4.608541286077965E-4 0.0 11.829034793257765 3.0723608573853106E-5 84-85 6.144721714770621E-5 4.608541286077965E-4 0.0 12.725657224072808 3.0723608573853106E-5 86 6.144721714770621E-5 4.608541286077965E-4 0.0 13.415770919858696 3.0723608573853106E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 5020 0.0 41.98772 1 GGTATCA 2765 0.0 38.781204 1 ATCAACG 5985 0.0 34.787846 3 TCAACGC 6000 0.0 34.700874 4 CAACGCA 6085 0.0 34.14078 5 TATCAAC 6235 0.0 33.026745 2 AACGCAG 6430 0.0 32.518433 6 GTACATG 9470 0.0 28.13773 1 ACGCAGA 7705 0.0 26.359676 7 TACATGG 9845 0.0 25.947489 2 CGCAGAG 7975 0.0 25.292843 8 ACATGGG 10185 0.0 24.539816 3 CATGGGG 6775 0.0 22.473183 4 GCAGAGT 9175 0.0 21.534767 9 GAGTACA 6890 0.0 21.374268 1 GTATAGG 825 0.0 20.639933 1 AGTACAT 6915 0.0 19.432617 2 GTGTAGC 1850 0.0 18.657352 1 AGAGTAC 7790 0.0 17.596897 10-11 CAGAGTA 8690 0.0 16.59217 10-11 >>END_MODULE