##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920901_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3254826 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.21170993472462 31.0 30.0 34.0 26.0 34.0 2 30.21936287838428 31.0 30.0 34.0 26.0 34.0 3 30.36494976997234 31.0 30.0 34.0 26.0 34.0 4 33.99816364991554 35.0 35.0 37.0 30.0 37.0 5 33.52302242884873 35.0 35.0 37.0 28.0 37.0 6 33.46784712915529 35.0 35.0 37.0 28.0 37.0 7 33.283653565505496 35.0 33.0 37.0 27.0 37.0 8 33.21220919336395 35.0 33.0 37.0 27.0 37.0 9 34.5437992691468 38.0 34.0 39.0 27.0 39.0 10-11 34.35373549922484 37.5 34.0 39.0 27.0 39.0 12-13 34.17132052527539 37.0 34.0 39.0 26.0 39.0 14-15 35.074157420396666 38.0 34.0 40.0 26.0 41.0 16-17 34.9537575894994 38.0 34.0 40.0 25.0 41.0 18-19 34.863932357674415 38.5 34.0 40.0 25.0 41.0 20-21 34.753031652076025 38.0 34.0 40.0 25.0 41.0 22-23 34.606532422931366 38.0 34.0 40.0 24.0 41.0 24-25 34.43631011304444 38.0 33.0 40.0 24.0 41.0 26-27 34.249604433539616 38.0 33.0 40.0 23.0 41.0 28-29 34.192751163963905 38.0 33.0 40.0 22.5 41.0 30-31 34.179779502805985 38.0 33.0 40.0 22.5 41.0 32-33 34.03131811039975 38.0 33.0 40.0 22.0 41.0 34-35 33.859037472356434 38.0 33.0 40.0 20.0 41.0 36-37 33.663363878744974 38.0 33.0 40.0 18.5 41.0 38-39 33.47194320065036 38.0 32.0 40.0 18.0 41.0 40-41 33.245327399990046 38.0 32.0 40.0 16.0 41.0 42-43 33.26684360392844 38.0 32.0 40.0 15.5 41.0 44-45 33.1171932078704 38.0 32.0 40.0 15.0 41.0 46-47 32.86720442198754 38.0 31.5 40.0 13.0 41.0 48-49 32.599958031550685 37.0 31.0 40.0 9.0 41.0 50-51 32.3351317397612 37.0 31.0 40.0 8.5 41.0 52-53 32.080861465405526 37.0 31.0 40.0 7.5 41.0 54-55 31.798177997840746 36.5 30.0 40.0 6.5 41.0 56-57 31.47036508249596 36.0 30.0 39.0 2.0 41.0 58-59 31.137318707666708 36.0 29.0 39.0 2.0 40.5 60-61 30.811903155498943 35.0 29.0 39.0 2.0 40.0 62-63 30.491990662480884 35.0 28.5 39.0 2.0 40.0 64-65 30.09248528185531 35.0 28.0 38.0 2.0 40.0 66-67 29.662133398221595 34.0 28.0 38.0 2.0 40.0 68-69 29.22082701195087 34.0 28.0 37.0 2.0 39.5 70-71 28.791049198943355 34.0 26.5 36.5 2.0 39.0 72-73 28.34649624895463 34.0 26.0 36.0 2.0 39.0 74-75 27.90254056591658 33.0 26.0 36.0 2.0 38.5 76-77 26.46374153334157 31.5 24.0 34.5 2.0 36.0 78-79 27.298024226179834 33.0 26.0 35.0 2.0 37.0 80-81 27.31831916667742 33.0 26.0 35.0 2.0 37.0 82-83 26.972287765920512 33.0 25.0 35.0 2.0 36.0 84-85 26.643492616809624 33.0 25.0 35.0 2.0 36.0 86-87 26.093850792638378 32.0 23.5 35.0 2.0 35.0 88-89 25.718795874188054 32.0 22.0 35.0 2.0 35.0 90-91 25.33846494405538 32.0 20.0 34.5 2.0 35.0 92-93 25.021665520676066 32.0 19.0 34.0 2.0 35.0 94-95 24.62655991441632 32.0 16.5 34.0 2.0 35.0 96-97 24.085413321633784 31.0 4.5 34.0 2.0 35.0 98-99 23.477664090184852 31.0 2.0 34.0 2.0 35.0 100-101 21.28599716236751 28.0 2.0 33.0 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 80671.0 3 35487.0 4 18585.0 5 12990.0 6 11237.0 7 11262.0 8 12919.0 9 14661.0 10 16700.0 11 18526.0 12 20882.0 13 23013.0 14 24956.0 15 26781.0 16 28096.0 17 29618.0 18 28637.0 19 27220.0 20 27394.0 21 28277.0 22 30618.0 23 34695.0 24 39871.0 25 47095.0 26 56097.0 27 66512.0 28 78122.0 29 92305.0 30 109235.0 31 128728.0 32 154337.0 33 188395.0 34 235669.0 35 305947.0 36 407716.0 37 478602.0 38 281137.0 39 21833.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.285191543618666 18.832216058406743 12.620635370655457 25.26195702731913 2 16.316048845621857 20.28861143422106 38.02276988078626 25.37256983937083 3 20.26387359779894 23.622549768208756 28.615548557246612 27.498028076745683 4 13.751781054101334 15.711777895294146 35.957150841954245 34.57929020865028 5 14.294247218643546 36.86363095872725 34.30763128196037 14.53449054066884 6 34.073391967186694 35.1530004022927 16.62772916228389 14.145878468236717 7 29.66030565353195 31.204233810922105 20.3556009815963 18.779859553949645 8 26.950568194751973 34.917476256774435 19.430070302218947 18.70188524625464 9 26.537095352447 15.7782047593921 19.142484858647375 38.54221502951352 10-11 25.956438911881712 25.358017221982905 27.30356824561757 21.381975620517814 12-13 26.445871090636906 22.356455603070557 27.46611416252222 23.731559143770316 14-15 23.175950219772446 24.138781147246 24.871719946233416 27.813548686748135 16-17 23.554788876131962 27.366115437346732 25.617460204977434 23.46163548154387 18-19 23.451261244599372 26.489772493695586 27.083217068868688 22.975749192836357 20-21 24.017336257030003 25.78132791745623 27.02673172398881 23.174604101524952 22-23 23.697640927307546 25.64815268930843 26.87371248496954 23.780493898414477 24-25 23.431487058368567 25.863788593301063 26.99400355271019 23.71072079562018 26-27 23.32052508046726 26.16600473357609 26.854566815685516 23.65890337027113 28-29 23.468753126393192 26.2189033853642 26.885467702274084 23.426875785968523 30-31 23.69746566625195 26.013732730945634 26.679779554742623 23.609022048059796 32-33 23.34564602930153 26.09585708872302 26.68777619434124 23.870720687634208 34-35 23.674153406907525 26.117813867137773 26.70158693039143 23.50644579556327 36-37 23.83517471130882 25.913591399243924 26.69457454342518 23.556659346022073 38-39 23.591406504391117 26.02915095996618 26.735912144204914 23.643530391437793 40-41 23.792966905516177 25.892612526453966 26.717028249679664 23.59739231835019 42-43 23.635546839831257 25.82656582674712 26.741512027259102 23.79637530616252 44-45 23.51754398904484 25.948819173495203 26.83423929745371 23.699397540006245 46-47 23.53257462136113 25.963577522619985 26.63324891817467 23.870598937844218 48-49 23.43815365470516 25.996888958876646 26.62822290417609 23.9367344822421 50-51 23.432337403042563 26.112245924849297 26.597015819704684 23.858400852403452 52-53 23.555890943017605 25.92737287610914 26.567372654884508 23.949363525988748 54-55 23.33797983389055 25.871226536337268 26.813160745515212 23.977632884256966 56-57 23.27153988435044 26.053704534421414 26.592885278339367 24.08187030288878 58-59 23.160052422561733 25.893694529351425 26.699666068097404 24.246586979989434 60-61 23.189031989518394 25.84024094049273 26.84113781415739 24.129589255831483 62-63 23.045844153629435 25.847570443757224 26.765286211203065 24.341299191410275 64-65 22.881776199152583 25.80524735834621 26.713733527110943 24.599242915390267 66-67 22.869301918940305 25.872338149778678 26.657482825248373 24.60087710603264 68-69 23.08938419329623 25.756082020638615 26.60034157840713 24.554192207658023 70-71 22.909077276071972 25.63229236433746 26.531149709223488 24.92748065036708 72-73 23.000565253594154 25.69879821368799 26.381467181941886 24.91916935077597 74-75 22.78574818726633 25.860103900185223 26.336509111830075 25.017638800718373 76-77 22.851619438903338 25.593068398314532 26.58198158712451 24.973330575657616 78-79 22.81080878307023 25.718819803956627 26.437274469176682 25.033096943796462 80-81 22.743137792050895 25.853123483252805 26.31617358186874 25.087565142827557 82-83 22.69655819590125 25.85178598205046 26.327364696281037 25.124291125767257 84-85 22.60212664949 25.760052113820763 26.2280471298221 25.409774106867133 86-87 22.486087429320445 25.71149340837573 26.383809818662947 25.41860934364088 88-89 22.490748444573065 25.740410429267847 26.145518642089023 25.623322484070073 90-91 22.398165442282995 25.872956754873428 26.136732958054886 25.592144844788688 92-93 22.41135431863497 25.74445999661138 26.16930189304936 25.67488379170429 94-95 22.18517938177271 25.618473081212613 26.16881580685697 26.027531730157705 96-97 22.25852370488354 25.43463459477529 26.221453484942337 26.085388215398837 98-99 22.16397500299182 25.502229922516896 26.134867028839288 26.198928045651996 100-101 22.249567657907985 25.47703574862662 26.134985366351255 26.13841122711414 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 69.0 1 45.5 2 58.5 3 106.5 4 94.0 5 92.0 6 172.5 7 338.5 8 564.0 9 651.5 10 539.5 11 480.0 12 530.5 13 589.5 14 664.0 15 741.0 16 823.5 17 897.5 18 1015.5 19 1161.0 20 1340.0 21 1619.0 22 1984.0 23 2536.0 24 3296.5 25 4314.5 26 5617.5 27 7459.0 28 9876.5 29 13124.5 30 17467.0 31 23714.0 32 31495.0 33 37884.5 34 44221.5 35 51550.5 36 59835.0 37 68303.5 38 75757.5 39 82475.5 40 89172.0 41 96325.0 42 101534.5 43 107464.5 44 116006.5 45 123812.5 46 129932.5 47 134649.5 48 138488.0 49 141703.5 50 142866.0 51 141454.5 52 138701.0 53 136513.0 54 133424.5 55 126271.5 56 115603.0 57 103745.0 58 92974.0 59 81850.5 60 68922.5 61 56666.5 62 45885.0 63 34879.0 64 25337.0 65 18844.5 66 14317.0 67 11095.0 68 8552.5 69 6348.0 70 4659.0 71 3534.0 72 2710.5 73 2225.0 74 1657.0 75 1197.5 76 871.5 77 521.0 78 290.5 79 161.5 80 89.5 81 51.5 82 24.5 83 10.5 84 4.0 85 3.0 86 2.5 87 1.5 88 0.0 89 0.5 90 0.5 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.5 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.193466563189553 2 0.0 3 0.011951483735228858 4 0.013303322512478392 5 0.006421234191935298 6 0.10636513288267944 7 0.1416358355254628 8 0.12301732872970783 9 0.1419737952197752 10-11 0.11338547744180487 12-13 0.1133393920289441 14-15 0.1147834016319152 16-17 0.06533375363229862 18-19 0.07811477479902151 20-21 0.03633066713858129 22-23 0.0823239091736394 24-25 0.055809434974404167 26-27 0.0646885578522477 28-29 0.03921868634452348 30-31 0.023826158449023083 32-33 0.030815779399574663 34-35 0.019985707377291443 36-37 0.024164118143335467 38-39 0.0319371911125203 40-41 0.02533161526914188 42-43 0.013118980861035275 44-45 0.025623489550593487 46-47 0.03275136673972741 48-49 0.00886376107355662 50-51 0.015315718874065772 52-53 0.0066209376476653444 54-55 0.012458423276697432 56-57 0.005100119023259615 58-59 0.003702194833149299 60-61 0.022873726583233635 62-63 0.010215599850806157 64-65 0.007250771623429333 66-67 0.039495198821688164 68-69 0.0879924149555153 70-71 0.02133754615454098 72-73 0.043596800566297556 74-75 0.0848739686852692 76-77 0.24979829950971263 78-79 0.08103351761353757 80-81 0.016421768782724486 82-83 0.011367735172325647 84-85 0.012627403123853626 86-87 0.26609717385814174 88-89 0.6299875938068579 90-91 0.26738756541824354 92-93 0.3569929698238861 94-95 0.0011060499086587116 96-97 0.004239857983191728 98-99 0.0035793003988538862 100-101 0.005207651653268101 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3254826.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.669345802011264 #Duplication Level Percentage of deduplicated Percentage of total 1 68.99901877442142 31.51140048408519 2 12.942456039857372 11.821470008231511 3 6.081014977962717 8.331479275673678 4 3.40035128219824 6.211672742200952 5 2.1161911886326594 4.832253358841708 6 1.4457590457108274 3.9616121882972153 7 1.005651254904827 3.214920444153259 8 0.7503140221979003 2.741308043188309 9 0.5519247283428046 2.26854371478318 >10 2.586759659491205 19.57851513258532 >50 0.0888977476168594 2.7309063850042405 >100 0.030376665859210925 2.276155703140371 >500 9.465568033712839E-4 0.2997905487695163 >1k 3.3805600068384425E-4 0.21997197104558366 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 0.0 0.0 12-13 0.0 0.0 0.0 0.0 0.0 14-15 0.0 0.0 0.0 0.0 0.0 16-17 0.0 1.5361804286926553E-5 0.0 3.0723608573853106E-5 0.0 18-19 0.0 4.608541286077966E-5 0.0 3.0723608573853106E-5 0.0 20-21 0.0 6.144721714770621E-5 0.0 1.2289443429541242E-4 0.0 22-23 0.0 6.144721714770621E-5 0.0 4.4549232432087E-4 0.0 24-25 0.0 6.144721714770621E-5 0.0 9.677936700763727E-4 0.0 26-27 0.0 1.2289443429541242E-4 0.0 0.0016283512544142146 0.0 28-29 0.0 1.2289443429541242E-4 0.0 0.006759193886247683 0.0 30-31 0.0 1.843416514431186E-4 0.0 0.029463940622325126 0.0 32-33 0.0 1.843416514431186E-4 0.0 0.0728917613414665 0.0 34-35 0.0 1.843416514431186E-4 0.0 0.12974579900738165 0.0 36-37 0.0 1.843416514431186E-4 0.0 0.22243892607469645 0.0 38-39 0.0 1.9970345573004517E-4 0.0 0.3766099938982913 0.0 40-41 0.0 2.1506526001697173E-4 0.0 0.5590006961969702 0.0 42-43 0.0 2.1506526001697173E-4 0.0 0.7470138188646643 1.5361804286926553E-5 44-45 0.0 2.1506526001697173E-4 0.0 0.9736926029225526 3.0723608573853106E-5 46-47 0.0 2.304270643038983E-4 0.0 1.2405271433864669 3.0723608573853106E-5 48-49 0.0 2.4578886859082485E-4 0.0 1.5341680323310678 3.0723608573853106E-5 50-51 0.0 2.4578886859082485E-4 0.0 1.858762956913826 3.0723608573853106E-5 52-53 0.0 2.4578886859082485E-4 0.0 2.1893489851684853 3.0723608573853106E-5 54-55 0.0 2.9187428145160444E-4 0.0 2.5484618839839674 3.0723608573853106E-5 56-57 0.0 3.0723608573853103E-4 0.0 2.9692831506200332 3.0723608573853106E-5 58-59 0.0 3.0723608573853103E-4 0.0 3.428048073844808 3.0723608573853106E-5 60-61 0.0 3.0723608573853103E-4 0.0 3.9289657880329085 3.0723608573853106E-5 62-63 0.0 3.3795969431238415E-4 0.0 4.4349989830485566 3.0723608573853106E-5 64-65 0.0 3.3795969431238415E-4 0.0 4.966916818287675 3.0723608573853106E-5 66-67 0.0 3.3795969431238415E-4 0.0 5.569836912940968 3.0723608573853106E-5 68-69 0.0 3.8404510717316375E-4 0.0 6.235233465629192 3.0723608573853106E-5 70-71 0.0 3.9940691146009034E-4 0.0 6.945378954205232 3.0723608573853106E-5 72-73 0.0 3.9940691146009034E-4 0.0 7.6742351204027495 3.0723608573853106E-5 74-75 0.0 4.147687157470169E-4 0.0 8.402415367211642 3.0723608573853106E-5 76-77 0.0 4.3013052003394346E-4 0.0 9.182211276424606 3.0723608573853106E-5 78-79 0.0 4.3013052003394346E-4 0.0 10.034007962330397 3.0723608573853106E-5 80-81 0.0 4.3013052003394346E-4 0.0 10.934148246327148 3.0723608573853106E-5 82-83 0.0 4.915777371816497E-4 0.0 11.85365976552971 4.608541286077966E-5 84-85 0.0 4.915777371816497E-4 0.0 12.759099872005446 6.144721714770621E-5 86-87 0.0 4.915777371816497E-4 0.0 13.695724441183646 6.144721714770621E-5 88-89 0.0 4.915777371816497E-4 0.0 14.684271908851656 6.144721714770621E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 5080 0.0 41.935074 1 GGTATCA 2995 0.0 41.7563 1 ATCAACG 6475 0.0 32.329533 3 TCAACGC 6540 0.0 32.080795 4 CAACGCA 6590 0.0 31.690403 5 TATCAAC 6775 0.0 31.455568 2 AACGCAG 7005 0.0 29.94939 6 GTACATG 9840 0.0 27.545008 1 TACATGG 10230 0.0 25.98202 2 ACGCAGA 8375 0.0 24.313435 7 ACATGGG 10465 0.0 24.17623 3 CGCAGAG 8625 0.0 23.386414 8 GAGTACA 7495 0.0 22.839888 1 CATGGGG 7025 0.0 21.352139 4 AGTACAT 7440 0.0 21.307575 2 GCAGAGT 9915 0.0 19.43422 9 TACGCTC 345 5.2750693E-11 19.262362 4 GTGTAGC 1885 0.0 18.667383 1 GTACGCT 240 3.113606E-6 17.800488 3 AGAGTAC 8350 0.0 17.618635 10-11 >>END_MODULE