##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920900_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3849430 Sequences flagged as poor quality 0 Sequence length 98 %GC 47 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.813545382043575 31.0 30.0 33.0 23.0 34.0 2 28.8236105085688 31.0 29.0 34.0 22.0 34.0 3 28.912727338852765 31.0 29.0 34.0 22.0 34.0 4 32.41287593228088 35.0 33.0 37.0 25.0 37.0 5 32.393902214094034 35.0 33.0 37.0 25.0 37.0 6 32.52853799133898 35.0 33.0 37.0 25.0 37.0 7 32.37245176558607 35.0 33.0 37.0 24.0 37.0 8 32.323381903294774 35.0 32.0 37.0 23.0 37.0 9 33.6054628867131 37.0 33.0 39.0 23.0 39.0 10-11 33.41639151770522 37.0 33.0 39.0 22.5 39.0 12-13 33.25700207563197 37.0 33.0 39.0 22.0 39.0 14-15 34.05023496985268 38.0 33.0 40.0 19.5 41.0 16-17 33.95803677427567 38.0 33.0 40.0 19.0 41.0 18-19 33.856919465998864 38.0 33.0 40.0 18.0 41.0 20-21 33.76705083609781 38.0 32.0 40.0 18.0 41.0 22-23 33.55777699555519 38.0 32.0 40.0 18.0 41.0 24-25 33.38107888700405 38.0 32.0 40.0 17.5 41.0 26-27 33.42562587188233 38.0 32.0 40.0 17.0 41.0 28-29 33.270993367849265 38.0 32.0 40.0 16.0 41.0 30-31 33.030738317101495 38.0 32.0 40.0 14.5 41.0 32-33 32.780719353254895 38.0 31.0 40.0 9.5 41.0 34-35 32.46073847296873 37.0 31.0 40.0 9.0 41.0 36-37 32.16711993723746 37.0 30.0 40.0 8.0 41.0 38-39 31.96905035290939 37.0 30.0 40.0 8.0 41.0 40-41 31.779462154137107 37.0 30.0 40.0 4.5 41.0 42-43 31.550023509974203 37.0 30.0 40.0 2.0 41.0 44-45 31.27918016433602 36.5 30.0 40.0 2.0 41.0 46-47 31.03783677063877 36.0 29.5 39.5 2.0 41.0 48-49 30.7442251190436 36.0 29.0 39.0 2.0 40.0 50-51 29.58380656356915 34.5 27.0 38.0 2.0 39.5 52-53 30.022062617062787 35.0 28.0 38.5 2.0 39.5 54-55 30.68940843189771 36.0 29.0 39.0 2.0 40.0 56-57 30.655604855783842 36.0 29.0 39.0 2.0 41.0 58-59 30.42936291866588 35.5 28.5 39.0 2.0 41.0 60-61 30.12235278989357 35.0 28.0 39.0 2.0 40.0 62-63 29.741900619052693 35.0 28.0 39.0 2.0 40.0 64-65 29.33703353483503 34.5 27.5 38.0 2.0 40.0 66-67 28.963167144226546 34.0 26.5 38.0 2.0 40.0 68-69 28.522918458057426 34.0 26.0 37.0 2.0 40.0 70-71 28.195854710957207 34.0 26.0 37.0 2.0 39.0 72-73 27.731914335369133 34.0 25.5 36.0 2.0 39.0 74-75 27.281438420753204 33.0 25.0 36.0 2.0 39.0 76-77 26.857875062022167 33.0 24.0 35.0 2.0 37.5 78-79 26.39060523246299 33.0 23.0 35.0 2.0 37.0 80-81 25.931373865741165 32.0 21.0 35.0 2.0 36.5 82-83 25.443392268465722 32.0 19.5 35.0 2.0 36.0 84-85 25.03315399942329 32.0 18.0 35.0 2.0 36.0 86-87 24.567277233252717 31.5 12.5 34.5 2.0 35.0 88-89 24.022034560960975 31.0 4.5 34.0 2.0 35.0 90-91 23.513662412357156 31.0 2.0 34.0 2.0 35.0 92-93 22.961000070140255 31.0 2.0 34.0 2.0 35.0 94-95 22.313849193257184 30.0 2.0 34.0 2.0 35.0 96-97 21.661119308572957 30.0 2.0 34.0 2.0 35.0 98 21.256776457813235 29.0 2.0 34.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 174082.0 3 30095.0 4 22484.0 5 18165.0 6 17229.0 7 17482.0 8 20040.0 9 23061.0 10 25390.0 11 27619.0 12 29083.0 13 28968.0 14 27555.0 15 29031.0 16 31837.0 17 34668.0 18 35443.0 19 34942.0 20 35539.0 21 37825.0 22 41726.0 23 46414.0 24 53449.0 25 61303.0 26 70744.0 27 81932.0 28 94251.0 29 109492.0 30 127764.0 31 150598.0 32 178779.0 33 217125.0 34 270353.0 35 345036.0 36 441499.0 37 501929.0 38 320769.0 39 35728.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.011758685739636 17.807060531998047 11.909095722248288 25.272085060014028 2 16.26395933282594 19.915310500879453 38.55141771499977 25.269312451294834 3 19.749506188942686 23.560932464939544 29.123549681731564 27.56601166438621 4 13.296902419645257 15.155611723922547 36.740668259220016 34.80681759721218 5 14.134842496667524 36.90618918069165 34.48256329105701 14.476405031583816 6 33.45595906216521 35.15544876833378 17.142406511306678 14.246185658194335 7 29.156294307975195 31.746835548282814 20.872247270622232 18.224622873119756 8 26.877323816063537 34.16463951833761 20.173925559424088 18.784111106174766 9 26.964121960913694 15.572253554422344 19.381882512475872 38.08174197218809 10-11 25.645943455228082 25.157143497312262 27.93071177467299 21.266201272786667 12-13 26.260088285774373 22.656967173347116 27.56125324076702 23.521691300111492 14-15 23.242234840464846 24.28732720456335 25.08160623410578 27.388831720866026 16-17 23.36603043410149 27.351111369752797 25.84172064152029 23.441137554625428 18-19 23.328240255704635 26.57508049241255 27.347124186938604 22.74955506494421 20-21 23.97923820557031 25.978631403143517 27.126837306234 22.915293085052173 22-23 23.603394592221957 25.83469721342006 26.985180123183465 23.576728071174518 24-25 23.36794780729146 25.97052559887546 27.133709697230042 23.527816896603042 26-27 23.254697280856497 26.20043282823707 27.04560346834529 23.499266422561142 28-29 23.335276308632853 26.387800974346874 26.96153103854304 23.315391678477226 30-31 23.551774719024536 26.203570218556614 26.74564385848929 23.499011203929555 32-33 23.2190891602911 26.27166900495464 26.783931408025254 23.725310426729003 34-35 23.66583075998425 26.20118408599476 26.766766915509553 23.366218238511433 36-37 23.6739165921215 25.9298208957173 26.795724481067708 23.600538031093496 38-39 23.463341583909642 26.145451094810102 26.82891364279325 23.562293678487013 40-41 23.65639416336622 25.93222706374713 26.976886867573995 23.43449190531265 42-43 23.432717677756017 25.911509518865966 26.843910481679394 23.81186232169862 44-45 23.318283582284234 25.940355089601972 26.94378921896253 23.79757210915126 46-47 23.44102374806469 25.89289045003541 26.810504608874968 23.85558119302493 48-49 23.212246968710915 26.044906247513865 26.80835940648423 23.934487377290992 50-51 23.152506090746748 26.146554302099734 26.817713447401132 23.88322615975239 52-53 23.30091512875066 25.94998371434119 26.857074030846707 23.89202712606144 54-55 22.97514912742026 25.772402390214683 27.127240173772105 24.12520830859295 56-57 22.879035315426922 25.933307954770495 27.05364800316023 24.13400872664235 58-59 22.87685155981172 25.702059409050488 27.10298245298234 24.31810657815546 60-61 22.821750041355543 25.677239422243492 27.248019499986693 24.252991036414272 62-63 22.79572694655266 25.64763352183352 27.268928147152227 24.287711384461595 64-65 22.721699416923546 25.54523951390199 27.116187007268294 24.61687406190617 66-67 22.670670645584824 25.594713432138 27.060924671655062 24.673691250622117 68-69 22.87853040167485 25.349963220124717 27.03408885897856 24.73741751922187 70-71 22.739534227520387 25.261231950292846 27.056416817420452 24.942817004766315 72-73 22.849933249199513 25.2336278017084 27.009811846181126 24.90662710291096 74-75 22.728466016866168 25.31879555060112 27.02470434146957 24.92803409106314 76-77 22.806455678894405 25.119844459312713 27.172017483728432 24.901682378064447 78-79 22.862374596805413 25.2065406875574 27.01639004079066 24.914694674846523 80-81 22.966905893319254 25.14255170750468 26.97857389626559 24.91196850291048 82-83 22.99036063502509 25.00342526425376 27.091200414655773 24.915013686065375 84-85 22.967144018484326 24.909007145415966 27.066789276713703 25.057059559386 86-87 23.008072921147203 24.863296310720916 27.125906600410737 25.00272416772114 88-89 23.168932794407525 24.657616239130334 27.051824925266555 25.12162604119559 90-91 23.221418849505373 24.591705299826348 26.99464437502933 25.19223147563895 92-93 23.50860900580104 24.321987753954364 27.060564492359813 25.10883874788479 94-95 23.461511686026697 24.123688142826637 27.16367946555517 25.251120705591497 96-97 23.663538072743556 23.895239578940235 27.120600679603868 25.320621668712345 98 23.75770798423453 23.845910971559945 27.04512692183046 25.35125412237506 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 148.0 1 119.0 2 191.5 3 330.0 4 304.5 5 332.5 6 553.5 7 942.0 8 1405.5 9 1640.0 10 1590.0 11 1601.5 12 1788.5 13 1969.5 14 2142.5 15 2340.0 16 2517.0 17 2610.0 18 2694.0 19 2803.0 20 2863.0 21 3048.0 22 3407.5 23 3886.0 24 4640.0 25 5832.0 26 7592.5 27 9842.5 28 12750.5 29 17175.5 30 23645.0 31 32216.0 32 40657.5 33 48404.0 34 58308.0 35 69997.5 36 81567.0 37 92510.0 38 102156.0 39 110296.5 40 117904.5 41 124961.0 42 133890.0 43 144176.0 44 151662.5 45 158007.5 46 163517.5 47 166672.5 48 169135.0 49 169516.0 50 168542.0 51 167452.5 52 164480.5 53 160669.0 54 154438.0 55 145056.5 56 132191.5 57 118606.0 58 106688.0 59 91702.5 60 75897.0 61 61918.0 62 49806.0 63 38604.0 64 28540.5 65 21754.0 66 16857.5 67 13188.0 68 10384.5 69 8258.0 70 6278.5 71 4568.0 72 3542.5 73 2904.0 74 2308.0 75 1780.0 76 1286.5 77 820.5 78 495.5 79 289.0 80 172.5 81 107.5 82 62.5 83 34.5 84 21.5 85 17.0 86 12.0 87 9.0 88 6.0 89 6.0 90 6.5 91 4.5 92 3.5 93 3.0 94 3.5 95 4.5 96 3.0 97 1.5 98 1.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.3959807036366423 2 0.026471451617512205 3 0.020574474662482498 4 0.017768864481234884 5 0.02441919972567367 6 0.022418903577932317 7 0.01711941768002016 8 0.011092551364747509 9 0.0 10-11 6.494468012147253E-5 12-13 0.005858010146956822 14-15 0.003974614423434119 16-17 0.006780224604681732 18-19 0.03627809831585456 20-21 0.07892077528361341 22-23 0.09830026783186083 24-25 0.06578896096305167 26-27 0.07454350384342616 28-29 0.058125488708717914 30-31 0.0538910955647979 32-33 0.021210932527672928 34-35 0.35006481479076124 36-37 0.536572947163606 38-39 0.4880852489849146 40-41 0.49721647100999367 42-43 0.4447281805358196 44-45 0.419386766352421 46-47 0.4173345144605825 48-49 0.40694336564114686 50-51 0.40370912057109754 52-53 0.46339328160273074 54-55 0.46695225007338753 56-57 0.4364022725442468 58-59 0.4219585756852313 60-61 0.43673998488087845 62-63 0.41595768724200727 64-65 0.463886861171654 66-67 0.4868383111265823 68-69 0.42841407688930566 70-71 0.3847582629116518 72-73 0.37070423413336523 74-75 0.3529353696521303 76-77 0.3512338190329477 78-79 0.3507792062720974 80-81 0.3677167788477775 82-83 0.3626381048622783 84-85 0.36275500528649696 86-87 0.3479995739628984 88-89 0.3932010713274433 90-91 0.3691455618104499 92-93 0.3591310921357188 94-95 0.3668854869422226 96-97 0.3664828299254695 98 0.362625115926254 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 3849430.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.39441823495004 #Duplication Level Percentage of deduplicated Percentage of total 1 77.76545102454197 46.1883372238117 2 12.041401185925178 14.303840363433268 3 4.366989210663749 7.781243508170312 4 1.94994722509952 4.632639240945647 5 1.0868351634935163 3.2275971126492102 6 0.6738227398890487 2.4012785777514067 7 0.4124181741592861 1.7146736266597775 8 0.31858563228579995 1.5137766630103042 9 0.2214075590638573 1.183533584707633 >10 1.0752160010740475 11.278011741568994 >50 0.062090459482748224 2.506939221672617 >100 0.024691509375756638 2.538616387181872 >500 6.600663460439007E-4 0.24808453114085788 >1k 4.8404859947755006E-4 0.48142821729639856 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 2.5977872048589012E-5 0.0 4 0.0 0.0 0.0 2.5977872048589012E-5 0.0 5 0.0 0.0 0.0 2.5977872048589012E-5 0.0 6 0.0 0.0 0.0 2.5977872048589012E-5 0.0 7 0.0 0.0 0.0 2.5977872048589012E-5 0.0 8 0.0 0.0 0.0 2.5977872048589012E-5 0.0 9 0.0 0.0 0.0 2.5977872048589012E-5 2.5977872048589012E-5 10-11 0.0 0.0 0.0 2.5977872048589012E-5 2.5977872048589012E-5 12-13 0.0 2.5977872048589012E-5 0.0 5.1955744097178025E-5 5.1955744097178025E-5 14-15 0.0 6.494468012147253E-5 0.0 5.1955744097178025E-5 1.1690042421865055E-4 16-17 0.0 7.793361614576703E-5 0.0 9.092255217006155E-5 1.8184510434012308E-4 18-19 0.0 7.793361614576703E-5 0.0 1.4287829626723957E-4 2.078229763887121E-4 20-21 0.0 7.793361614576703E-5 0.0 2.7276765651018463E-4 2.4678978446159564E-4 22-23 0.0 7.793361614576703E-5 0.0 6.624357372390198E-4 3.117344645830681E-4 24-25 0.0 7.793361614576703E-5 0.0 0.0013248714744780396 3.6369020868024616E-4 26-27 0.0 7.793361614576703E-5 0.0 0.0026757208210046683 3.8966808072883515E-4 28-29 0.0 7.793361614576703E-5 0.0 0.012183621990788247 4.0265701675312965E-4 30-31 0.0 7.793361614576703E-5 0.0 0.05238437898597974 4.156459527774242E-4 32-33 0.0 7.793361614576703E-5 0.0 0.1345523882756668 4.416238248260132E-4 34-35 0.0 1.0391148819435605E-4 0.0 0.24569871383555486 4.416238248260132E-4 36-37 0.0 1.4287829626723957E-4 0.0 0.41604860979417735 4.416238248260132E-4 38-39 0.0 1.8184510434012308E-4 0.0 0.6985969351306557 4.416238248260132E-4 40-41 1.2988936024294506E-5 1.948340403644176E-4 0.0 1.0191378983381956 4.416238248260132E-4 42-43 2.5977872048589012E-5 2.5977872048589014E-4 0.0 1.3628511234130767 4.416238248260132E-4 44-45 2.5977872048589012E-5 2.5977872048589014E-4 0.0 1.7581693913124798 4.8059063289889673E-4 46-47 2.5977872048589012E-5 2.5977872048589014E-4 0.0 2.225680165634912 5.195574409717803E-4 48-49 2.5977872048589012E-5 2.5977872048589014E-4 0.0 2.7177530179792853 5.715131850689583E-4 50-51 2.5977872048589012E-5 2.5977872048589014E-4 0.0 3.2593396944482693 5.715131850689583E-4 52-53 2.5977872048589012E-5 2.5977872048589014E-4 0.0 3.805784232990339 7.143914813361979E-4 54-55 2.5977872048589012E-5 2.8575659253447913E-4 0.0 4.409977581096422 8.053140335062594E-4 56-57 2.5977872048589012E-5 2.8575659253447913E-4 0.0 5.094715321489156 8.053140335062594E-4 58-59 2.5977872048589012E-5 2.8575659253447913E-4 0.0 5.821160535455899 8.053140335062594E-4 60-61 2.5977872048589012E-5 2.8575659253447913E-4 0.0 6.58806628513832 8.572697776034374E-4 62-63 2.5977872048589012E-5 2.8575659253447913E-4 0.0 7.367207612555625 8.572697776034374E-4 64-65 2.5977872048589012E-5 2.8575659253447913E-4 0.0 8.187030287601022 8.572697776034374E-4 66-67 2.5977872048589012E-5 3.3771233663165717E-4 0.0 9.107439283218554 8.572697776034374E-4 68-69 2.5977872048589012E-5 3.3771233663165717E-4 0.0 10.10292432905651 8.572697776034374E-4 70-71 2.5977872048589012E-5 3.5070127265595167E-4 0.0 11.143584894386962 8.832476496520264E-4 72-73 2.5977872048589012E-5 3.6369020868024616E-4 0.0 12.181998373785209 9.741702018220879E-4 74-75 2.5977872048589012E-5 3.6369020868024616E-4 0.0 13.23051724541036 0.001000148073870677 76-77 2.5977872048589012E-5 4.416238248260132E-4 0.0 14.364308482035003 0.0010391148819435606 78-79 2.5977872048589012E-5 4.416238248260132E-4 0.0 15.576423002886141 0.0010650927539921494 80-81 2.5977872048589012E-5 4.416238248260132E-4 0.0 16.815593477475886 0.0010910706260407383 82-83 2.5977872048589012E-5 4.416238248260132E-4 0.0 18.06166107709453 0.0011430263701379165 84-85 2.5977872048589012E-5 4.416238248260132E-4 0.0 19.29385649303923 0.0011430263701379165 86 2.5977872048589012E-5 4.416238248260132E-4 0.0 20.243490594711425 0.0011430263701379165 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 6450 0.0 39.888855 1 GGTATCA 3745 0.0 37.72993 1 TCAACGC 7700 0.0 32.279335 4 ATCAACG 7860 0.0 31.388876 3 CAACGCA 7880 0.0 31.367403 5 AACGCAG 8180 0.0 30.379269 6 TATCAAC 8360 0.0 29.841063 2 GTACATG 11590 0.0 28.076014 1 TACATGG 12030 0.0 26.722315 2 ACATGGG 12185 0.0 25.403542 3 ACGCAGA 10075 0.0 24.160587 7 CGCAGAG 10390 0.0 23.249496 8 GAGTACA 8480 0.0 22.90425 1 CATGGGG 7890 0.0 22.37689 4 AGTACAT 8580 0.0 20.737963 2 GCAGAGT 11390 0.0 20.040176 9 AGAGTAC 9550 0.0 17.903038 10-11 GTATACG 215 3.1422103E-5 17.125805 1 GTGTAAG 1460 0.0 16.707924 1 CAGAGTA 10595 0.0 16.699661 10-11 >>END_MODULE