##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920900_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3849430 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.247379482157097 31.0 30.0 34.0 27.0 34.0 2 30.258080546990072 31.0 30.0 34.0 26.0 34.0 3 30.40706182473769 31.0 30.0 34.0 27.0 34.0 4 34.04596109034325 35.0 35.0 37.0 30.0 37.0 5 33.56718033578998 35.0 35.0 37.0 28.0 37.0 6 33.50760242425502 35.0 35.0 37.0 28.0 37.0 7 33.31569712918536 35.0 33.0 37.0 27.0 37.0 8 33.2566808592441 35.0 33.0 37.0 27.0 37.0 9 34.58742437192 38.0 34.0 39.0 27.0 39.0 10-11 34.4020226371177 37.5 34.0 39.0 27.0 39.0 12-13 34.22419228301332 37.0 34.0 39.0 26.0 39.0 14-15 35.12835328866871 38.0 34.0 40.0 26.0 41.0 16-17 35.01591703187225 38.0 34.0 40.0 25.5 41.0 18-19 34.93624432708219 38.5 34.0 40.0 25.0 41.0 20-21 34.82702633896447 38.0 34.0 40.0 25.0 41.0 22-23 34.68332922017026 38.0 34.0 40.0 24.5 41.0 24-25 34.514131702615714 38.0 33.0 40.0 24.0 41.0 26-27 34.34015620494463 38.0 33.0 40.0 23.5 41.0 28-29 34.27851824815622 38.0 33.0 40.0 23.5 41.0 30-31 34.26382970985315 38.0 33.0 40.0 23.0 41.0 32-33 34.11292282233993 38.0 33.0 40.0 22.0 41.0 34-35 33.94793670751254 38.0 33.0 40.0 21.5 41.0 36-37 33.75889962929577 38.0 33.0 40.0 19.5 41.0 38-39 33.57404057224056 38.0 32.5 40.0 18.5 41.0 40-41 33.34621801149781 38.0 32.0 40.0 17.0 41.0 42-43 33.37218666140182 38.0 32.0 40.0 17.0 41.0 44-45 33.22911547943461 38.0 32.0 40.0 15.0 41.0 46-47 32.99215091584988 38.0 32.0 40.0 14.5 41.0 48-49 32.7363217411409 37.0 31.0 40.0 10.5 41.0 50-51 32.49944511265304 37.0 31.0 40.0 9.0 41.0 52-53 32.25414178203007 37.0 31.0 40.0 8.0 41.0 54-55 31.986969109712348 36.5 31.0 40.0 7.5 41.0 56-57 31.68026629916637 36.0 30.0 39.5 4.0 41.0 58-59 31.368411037478275 36.0 30.0 39.0 2.0 41.0 60-61 31.059994596602614 35.0 29.0 39.0 2.0 40.0 62-63 30.754025531052648 35.0 29.0 39.0 2.0 40.0 64-65 30.372049368348044 35.0 29.0 38.5 2.0 40.0 66-67 29.96674975256077 34.5 28.0 38.0 2.0 40.0 68-69 29.539608981069925 34.0 28.0 37.5 2.0 40.0 70-71 29.128225997095676 34.0 27.5 37.0 2.0 39.0 72-73 28.699526423392555 34.0 26.5 36.0 2.0 39.0 74-75 28.26482427268453 34.0 26.0 36.0 2.0 39.0 76-77 26.764160538053687 31.5 25.0 34.5 2.0 36.5 78-79 27.61444681420366 33.0 26.0 35.0 2.0 37.0 80-81 27.643056374580134 33.0 26.0 35.0 2.0 37.0 82-83 27.31487726754351 33.0 26.0 35.0 2.0 36.0 84-85 27.002579342915705 33.0 25.5 35.0 2.0 36.0 86-87 26.482647950475783 33.0 25.0 35.0 2.0 35.5 88-89 26.124674692097273 32.5 24.0 35.0 2.0 35.0 90-91 25.776409884060755 32.0 23.0 35.0 2.0 35.0 92-93 25.483225958128866 32.0 20.5 35.0 2.0 35.0 94-95 25.121400700882987 32.0 19.5 34.5 2.0 35.0 96-97 24.627558755452107 32.0 15.0 34.0 2.0 35.0 98-99 24.072042614101306 32.0 2.0 34.0 2.0 35.0 100-101 21.898547187505685 28.5 2.0 33.0 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 91814.0 3 41127.0 4 21957.0 5 15059.0 6 13045.0 7 12962.0 8 14460.0 9 16924.0 10 19033.0 11 21162.0 12 24039.0 13 26038.0 14 28079.0 15 30357.0 16 32184.0 17 33741.0 18 32075.0 19 30256.0 20 30665.0 21 31649.0 22 34166.0 23 39001.0 24 45604.0 25 53663.0 26 64225.0 27 76575.0 28 90558.0 29 106947.0 30 126007.0 31 149949.0 32 179513.0 33 219240.0 34 276760.0 35 359649.0 36 484264.0 37 585476.0 38 362435.0 39 28770.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.23745525520508 18.959351828065465 12.521280862619003 25.281912054110457 2 16.240326489895907 20.84157914288609 37.50066893020525 25.417425437012753 3 19.513203313728027 24.19766596569773 29.374937320698223 26.91419339987602 4 13.666299114236748 15.955767957672926 36.3105772998095 34.06735562828082 5 14.125134087453207 37.118628524041696 34.45807885186587 14.298158536639228 6 33.528522983782885 35.54315375573424 16.881455899639043 14.046867360843832 7 29.056445522400292 31.845591236610932 20.917916460387506 18.18004678060127 8 26.875408036664126 34.41730413589864 20.07444149371981 18.632846333717417 9 26.809005484042164 15.456413831857393 19.406979406224963 38.32760127787548 10-11 25.635863053323423 25.30479423641947 27.902109014606353 21.15723369565076 12-13 26.211863970375965 22.703255616535404 27.6538588176914 23.431021595397226 14-15 23.172119665490914 24.340909220950877 25.101601646641097 27.38536946691711 16-17 23.358263069655045 27.432839378732655 25.892382616191284 23.31651493542102 18-19 23.324875142017017 26.65558695601307 27.358717440079865 22.66082046189004 20-21 23.946325154593897 25.996424102484806 27.0775613730303 22.979689369890995 22-23 23.629681946827212 25.85971621574717 27.008747472990525 23.501854364435097 24-25 23.3604725091404 26.011552279758348 27.124099931222815 23.503875279878436 26-27 23.264927604044814 26.24232498895214 27.05348462398295 23.439262783020094 28-29 23.32914184835002 26.423650630522438 26.95519000655036 23.292017514577182 30-31 23.523628684034275 26.199188114168116 26.7265046489526 23.55067855284501 32-33 23.23583807127876 26.281623008445276 26.77367290103106 23.708866019244905 34-35 23.63980118349837 26.216116743569767 26.80942490719857 23.334657165733294 36-37 23.697649177611023 25.947912463170553 26.774705773677574 23.579732585540846 38-39 23.479032552507135 26.153604280478955 26.85929081829208 23.508072348721825 40-41 23.657097243504115 25.948421620731132 26.972412174906772 23.42206896085798 42-43 23.4007749204905 25.947066585847267 26.82617239006046 23.825986103601775 44-45 23.31638860262229 25.92107253051533 26.949956267471574 23.81258259939081 46-47 23.357706627825316 25.92309386436148 26.84839984070195 23.870799667111253 48-49 23.161948621608417 26.04600930172864 26.840746835046758 23.951295241616187 50-51 23.065239123077895 26.15995494702573 26.850832174423083 23.923973755473295 52-53 23.2740834633512 25.93891821065453 26.801783926089666 23.985214399904603 54-55 22.96940527792829 25.76350403120048 26.989914431740576 24.277176259130655 56-57 22.767259504310864 25.93870145876042 26.907207602981064 24.38683143394765 58-59 22.775679692576034 25.693760152880657 26.93479840499917 24.595761749544135 60-61 22.701907030555233 25.742931215810742 27.05099164679432 24.504170106839705 62-63 22.635549554008403 25.678398911927296 26.99146468277861 24.69458685128569 64-65 22.44734657060345 25.60798122797555 26.849416959459948 25.095255241961045 66-67 22.434897635257833 25.696782581068938 26.709989195356147 25.158330588317078 68-69 22.613637353455506 25.49527447342006 26.71155950502519 25.17952866809925 70-71 22.37784351039914 25.33422647474866 26.694010894385162 25.59391912046704 72-73 22.42141808377194 25.331062898149696 26.561986506036494 25.68553251204187 74-75 22.10122257341414 25.44839803661285 26.523211708666043 25.927167681306962 76-77 22.122178447373514 25.237114728446763 26.73612621324582 25.90458061093391 78-79 22.04482321073939 25.23727744291672 26.59914876380178 26.118750582542106 80-81 21.98385855285593 25.23130986057297 26.543281488001092 26.241550098570006 82-83 21.87594952659259 25.14561410459845 26.596266651424443 26.382169717384514 84-85 21.734816970687092 24.970218910816257 26.56393912160791 26.731024996888735 86-87 21.610151611526916 24.945039974952817 26.633042071247985 26.811766342272282 88-89 21.657457191461884 24.77621792178035 26.532647290061544 27.033677596696222 90-91 21.48261011751538 24.72620965068898 26.481445135330034 27.309735096465605 92-93 21.565034058581595 24.515374331550802 26.552814786388247 27.366776823479356 94-95 21.30385954958543 24.246834625876794 26.70058895091608 27.7487168736217 96-97 21.2772587612135 24.050150327322058 26.78886655563254 27.8837243558319 98-99 21.16150239303312 24.086983110431277 26.686625279044314 28.06488921749129 100-101 21.231773665333243 23.86376212642606 26.736889223269642 28.16757498497105 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 141.0 1 109.5 2 138.0 3 214.0 4 193.5 5 230.5 6 410.0 7 706.5 8 1027.0 9 1119.5 10 956.5 11 795.5 12 793.0 13 876.5 14 926.0 15 965.5 16 1051.0 17 1185.0 18 1372.5 19 1542.0 20 1725.5 21 2011.5 22 2388.5 23 2935.0 24 3626.5 25 4487.5 26 5911.0 27 7884.0 28 10102.5 29 13523.5 30 18755.5 31 25597.0 32 34328.0 33 42022.5 34 49378.5 35 58735.5 36 70565.0 37 82098.5 38 91657.0 39 99971.0 40 107825.0 41 115581.0 42 123249.5 43 132983.5 44 141947.0 45 150096.5 46 157043.5 47 161737.0 48 165519.5 49 167961.5 50 167910.5 51 166579.5 52 164442.0 53 162066.0 54 157287.5 55 147228.5 56 134950.0 57 121138.0 58 108145.5 59 94095.0 60 78078.0 61 63714.0 62 51016.0 63 39366.5 64 29425.0 65 22328.5 66 17134.5 67 13380.5 68 10630.0 69 8334.0 70 6470.5 71 4859.0 72 3574.5 73 3002.0 74 2510.5 75 1931.0 76 1391.5 77 890.5 78 547.5 79 298.0 80 168.5 81 98.0 82 55.5 83 26.5 84 11.0 85 4.5 86 4.0 87 4.0 88 1.5 89 0.5 90 0.0 91 0.0 92 0.0 93 0.5 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.19127507189376092 2 0.0 3 0.012261555606934014 4 0.0141839181385296 5 0.0068321803487789105 6 0.10676905411970085 7 0.14363165455664864 8 0.12469378583322725 9 0.14417718986966901 10-11 0.1158353314646584 12-13 0.11544566338392956 14-15 0.11721215868323362 16-17 0.06628254053197485 18-19 0.07949228846868238 20-21 0.03753802511021113 22-23 0.08399944926911257 24-25 0.05777478743606196 26-27 0.0657240162829302 28-29 0.040252712739288675 30-31 0.025523259287738704 32-33 0.03229049495639614 34-35 0.019626282332708998 36-37 0.024601044830013796 38-39 0.032797063461343624 40-41 0.024860823550499685 42-43 0.013482515593217696 44-45 0.02691307544233822 46-47 0.033706288983044244 48-49 0.00936502287351634 50-51 0.016301114710489603 52-53 0.007260815237580629 54-55 0.013365615168999046 56-57 0.005273508025863569 58-59 0.003974614423434119 60-61 0.02357491888409453 62-63 0.010975650940528858 64-65 0.007741405870479526 66-67 0.040200756995191496 68-69 0.08979251473594792 70-71 0.021873368264911947 72-73 0.04440917226706292 74-75 0.0862855020093884 76-77 0.25544041585377575 78-79 0.08160948504064239 80-81 0.016690782791218443 82-83 0.012274544542958309 84-85 0.013274692616828985 86-87 0.2669486131713007 88-89 0.6263914397716026 90-91 0.2679747391172199 92-93 0.3555331568569892 94-95 0.0011170484980893274 96-97 0.004234393143920009 98-99 0.0034031012383651605 100-101 0.00498775143332909 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3849430.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.217770687516555 #Duplication Level Percentage of deduplicated Percentage of total 1 76.06557805255767 43.52302802224637 2 12.884752593778659 14.744736385524233 3 4.636715685110314 7.959076044415596 4 2.1875779814480185 5.006733412142124 5 1.1504115648542554 3.2911992557048935 6 0.7120418257622022 2.4444867543829383 7 0.4758186079761624 1.9057696000023376 8 0.35110400870920255 1.6071510926232775 9 0.24345066376173988 1.2536733827558635 >10 1.1926905153244272 12.0719456320041 >50 0.07047680981850654 2.7329074810762353 >100 0.028104506507926202 2.7180768481447273 >500 7.298196689445714E-4 0.26788176621695536 >1k 5.473647221576135E-4 0.47333432276030657 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 2.5977872048589012E-5 0.0 5 0.0 0.0 0.0 2.5977872048589012E-5 0.0 6 0.0 0.0 0.0 2.5977872048589012E-5 2.5977872048589012E-5 7 0.0 0.0 0.0 2.5977872048589012E-5 2.5977872048589012E-5 8 0.0 0.0 0.0 2.5977872048589012E-5 7.793361614576703E-5 9 0.0 0.0 0.0 2.5977872048589012E-5 7.793361614576703E-5 10-11 0.0 0.0 0.0 5.1955744097178025E-5 7.793361614576703E-5 12-13 0.0 0.0 0.0 7.793361614576703E-5 1.948340403644176E-4 14-15 0.0 2.5977872048589012E-5 0.0 7.793361614576703E-5 2.5977872048589014E-4 16-17 0.0 5.1955744097178025E-5 0.0 1.0391148819435605E-4 3.117344645830681E-4 18-19 0.0 5.1955744097178025E-5 0.0 1.948340403644176E-4 3.117344645830681E-4 20-21 0.0 5.1955744097178025E-5 0.0 3.896680807288352E-4 3.7667914470454066E-4 22-23 0.0 7.793361614576703E-5 0.0 8.572697776034374E-4 4.8059063289889673E-4 24-25 0.0 7.793361614576703E-5 0.0 0.0015326944508667517 5.974910571175473E-4 26-27 0.0 7.793361614576703E-5 0.0 0.002831588053296202 5.974910571175473E-4 28-29 0.0 7.793361614576703E-5 0.0 0.01219661092681254 5.974910571175473E-4 30-31 0.0 7.793361614576703E-5 0.0 0.05304681472321876 6.104799931418417E-4 32-33 0.0 1.0391148819435605E-4 0.0 0.13557851422158607 6.494468012147253E-4 34-35 0.0 1.0391148819435605E-4 0.0 0.24742624232678606 7.533582894090813E-4 36-37 0.0 1.1690042421865056E-4 0.0 0.420620715274729 7.533582894090813E-4 38-39 0.0 1.2988936024294507E-4 0.0 0.7057018831359448 7.793361614576703E-4 40-41 2.5977872048589012E-5 1.2988936024294507E-4 0.0 1.03221775691466 8.053140335062594E-4 42-43 2.5977872048589012E-5 1.2988936024294507E-4 0.0 1.3818799146886682 8.053140335062594E-4 44-45 2.5977872048589012E-5 1.2988936024294507E-4 0.0 1.782900325502737 8.053140335062594E-4 46-47 2.5977872048589012E-5 1.2988936024294507E-4 0.0 2.2563730214603197 8.572697776034374E-4 48-49 2.5977872048589012E-5 1.2988936024294507E-4 0.0 2.7510176831375035 8.832476496520264E-4 50-51 3.8966808072883515E-5 1.2988936024294507E-4 0.0 3.291318454940082 8.962365856763209E-4 52-53 5.1955744097178025E-5 1.2988936024294507E-4 0.0 3.835243139893439 9.481923297734989E-4 54-55 5.1955744097178025E-5 1.4287829626723957E-4 0.0 4.435487851448136 0.0010131370098949715 56-57 5.1955744097178025E-5 1.5586723229153406E-4 0.0 5.116900424218651 0.0010391148819435606 58-59 5.1955744097178025E-5 1.5586723229153406E-4 0.0 5.841319364165604 0.0010521038179678549 60-61 5.1955744097178025E-5 1.5586723229153406E-4 0.0 6.607341866198372 0.0010650927539921494 62-63 5.1955744097178025E-5 1.5586723229153406E-4 0.0 7.383924373218893 0.0011430263701379165 64-65 5.1955744097178025E-5 1.5586723229153406E-4 0.0 8.201486973396062 0.001207971050259389 66-67 5.1955744097178025E-5 2.3380084843730112E-4 0.0 9.117492719701358 0.0012469378583322725 68-69 5.1955744097178025E-5 2.4678978446159564E-4 0.0 10.106457319655117 0.0012729157303808616 70-71 5.1955744097178025E-5 2.7276765651018463E-4 0.0 11.14213013355224 0.0013248714744780396 72-73 5.1955744097178025E-5 2.8575659253447913E-4 0.0 12.17662095427115 0.0013638382825509232 74-75 5.1955744097178025E-5 2.8575659253447913E-4 0.0 13.228568905006716 0.0013898161545995121 76-77 5.1955744097178025E-5 2.8575659253447913E-4 0.0 14.367828483697586 0.0014157940266481012 78-79 5.1955744097178025E-5 2.8575659253447913E-4 0.0 15.581852378144296 0.0014287829626723958 80-81 5.1955744097178025E-5 2.8575659253447913E-4 0.0 16.823789496107217 0.0014677497707452792 82-83 5.1955744097178025E-5 2.8575659253447913E-4 0.0 18.073493997812662 0.0015586723229153406 84-85 5.1955744097178025E-5 2.8575659253447913E-4 2.5977872048589012E-5 19.312651483466382 0.0015716612589396352 86-87 6.494468012147253E-5 2.8575659253447913E-4 2.5977872048589012E-5 20.60076426899567 0.0015846501949639297 88-89 7.793361614576703E-5 2.8575659253447913E-4 2.5977872048589012E-5 21.947613023226815 0.0015976391309882243 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 6325 0.0 39.929955 1 GGTATCA 3515 0.0 38.02295 1 TCAACGC 7535 0.0 33.01101 4 CAACGCA 7665 0.0 32.507565 5 ATCAACG 7820 0.0 31.747217 3 AACGCAG 8060 0.0 30.914454 6 TATCAAC 8200 0.0 30.216938 2 GTACATG 11055 0.0 28.26646 1 TACATGG 11500 0.0 26.41654 2 ACATGGG 11490 0.0 25.862177 3 ACGCAGA 9815 0.0 24.951504 7 CGCAGAG 10380 0.0 23.454659 8 CATGGGG 7645 0.0 22.849731 4 GAGTACA 8200 0.0 22.6792 1 AGTACAT 8150 0.0 20.734148 2 GCAGAGT 11790 0.0 19.96535 9 AGAGTAC 9410 0.0 18.835701 10-11 GTATAGG 1060 0.0 17.948118 1 GAGTACT 5205 0.0 17.22966 12-13 ATGGGGG 3980 0.0 16.694841 5 >>END_MODULE