##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920899_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3052951 Sequences flagged as poor quality 0 Sequence length 98 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.717122547987177 31.0 30.0 33.0 22.0 34.0 2 28.7629175836756 31.0 29.0 34.0 20.0 34.0 3 28.842721681415785 31.0 29.0 34.0 22.0 34.0 4 32.323625567524665 35.0 33.0 37.0 24.0 37.0 5 32.296648062808735 35.0 33.0 37.0 24.0 37.0 6 32.41401810903614 35.0 33.0 37.0 25.0 37.0 7 32.250155013952075 35.0 32.0 37.0 23.0 37.0 8 32.18508190927401 35.0 32.0 37.0 23.0 37.0 9 33.46321837461525 37.0 33.0 39.0 22.0 39.0 10-11 33.27639028598887 37.0 33.0 39.0 21.0 39.0 12-13 33.11033144652502 37.0 32.5 39.0 19.0 39.0 14-15 33.90563065047556 38.0 33.0 40.0 18.0 41.0 16-17 33.805518332917885 38.0 33.0 40.0 17.5 41.0 18-19 33.68872985514671 38.0 32.0 40.0 17.5 41.0 20-21 33.593369824802295 38.0 32.0 40.0 18.0 41.0 22-23 33.380261589524366 38.0 32.0 40.0 16.5 41.0 24-25 33.19432067530727 38.0 32.0 40.0 16.0 41.0 26-27 33.23799104538527 38.0 32.0 40.0 15.0 41.0 28-29 33.086162535854655 38.0 32.0 40.0 10.5 41.0 30-31 32.83864087566423 38.0 31.5 40.0 9.5 41.0 32-33 32.59830668752954 38.0 31.0 40.0 9.0 41.0 34-35 32.2744785291346 37.5 30.5 40.0 8.0 41.0 36-37 31.978719278494808 37.0 30.0 40.0 6.0 41.0 38-39 31.782603291045287 37.0 30.0 40.0 2.0 41.0 40-41 31.58488017003876 37.0 30.0 40.0 2.0 41.0 42-43 31.353084278129586 37.0 30.0 40.0 2.0 41.0 44-45 31.08104912263577 36.5 29.5 40.0 2.0 41.0 46-47 30.832103921746533 36.0 29.0 39.5 2.0 41.0 48-49 30.533111078428707 36.0 28.0 39.0 2.0 40.5 50-51 29.387141490315436 34.5 26.5 38.0 2.0 39.5 52-53 29.823142264648205 35.0 28.0 38.5 2.0 39.5 54-55 30.47197825972313 36.0 28.5 39.0 2.0 40.0 56-57 30.425232995878414 36.0 28.0 39.0 2.0 41.0 58-59 30.193927940540153 35.5 28.0 39.0 2.0 41.0 60-61 29.874948697178567 35.0 28.0 39.0 2.0 40.0 62-63 29.486588058570216 35.0 27.5 39.0 2.0 40.0 64-65 29.07415480955967 34.5 26.5 38.0 2.0 40.0 66-67 28.698474525139773 34.0 26.0 38.0 2.0 40.0 68-69 28.25681987689943 34.0 26.0 37.0 2.0 40.0 70-71 27.927898613505427 34.0 26.0 37.0 2.0 39.0 72-73 27.470625306465777 33.5 25.0 36.0 2.0 39.0 74-75 27.035486157491555 33.0 24.0 36.0 2.0 39.0 76-77 26.621909260908545 33.0 23.0 35.0 2.0 37.5 78-79 26.176407678996483 33.0 21.5 35.0 2.0 37.0 80-81 25.741918229280458 32.0 20.0 35.0 2.0 36.5 82-83 25.280875945929036 32.0 18.5 35.0 2.0 36.0 84-85 24.893439986426248 32.0 17.0 35.0 2.0 36.0 86-87 24.45138212175695 31.5 9.0 34.5 2.0 35.0 88-89 23.933240494197253 31.0 4.5 34.0 2.0 35.0 90-91 23.454145186083892 31.0 2.0 34.0 2.0 35.0 92-93 22.943033641876333 31.0 2.0 34.0 2.0 35.0 94-95 22.33197699537267 30.5 2.0 34.0 2.0 35.0 96-97 21.713644929119397 30.0 2.0 34.0 2.0 35.0 98 21.328267961064558 30.0 2.0 34.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 153975.0 3 26202.0 4 18891.0 5 15392.0 6 14448.0 7 14522.0 8 16720.0 9 18839.0 10 20885.0 11 22115.0 12 23221.0 13 23471.0 14 21776.0 15 22549.0 16 24821.0 17 26395.0 18 27325.0 19 26635.0 20 27902.0 21 29308.0 22 31819.0 23 35671.0 24 40524.0 25 47110.0 26 53999.0 27 62552.0 28 73067.0 29 84648.0 30 98546.0 31 116905.0 32 139445.0 33 169844.0 34 212587.0 35 272722.0 36 352867.0 37 399441.0 38 255380.0 39 30430.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.03992655250562 17.489487301238636 12.410903480469464 25.05968266578628 2 16.12564916693997 18.99828352250407 39.31552552093077 25.56054178962519 3 20.10074172116002 22.792560510555766 28.390065392024532 28.716632376259682 4 13.27476362283046 14.753945298026395 35.96127152423757 36.01001955490558 5 14.457886587568941 36.753544425143616 33.99630699632862 14.792261990958824 6 34.65345723698868 34.27960359916442 16.67781685987844 14.389122303968463 7 30.302359217623614 31.07923190701377 20.014086837161077 18.604322038201538 8 27.33976503993692 34.40003223387642 19.32977777952487 18.930424946661777 9 27.00361060495239 15.753839481865251 18.974723144917817 38.26782676826454 10-11 26.205186391789454 25.117910506916097 26.96884096731327 21.708062133981187 12-13 26.700375904075425 22.23994017243664 27.103550263391636 23.956133660096302 14-15 23.451553175999862 23.956899396712753 24.51678468451279 28.074762742774595 16-17 23.823121104777353 27.087754170136186 25.335448565208473 23.753676159877987 18-19 23.81702904100953 26.18766484934742 26.788581116405368 23.206724993237685 20-21 24.40705179950897 25.555602359647413 26.665913794620987 23.37143204622263 22-23 24.06423608378842 25.288527617338936 26.558311431464197 24.088924867408444 24-25 23.852888358496212 25.52490356405743 26.64072207405533 23.98148600339103 26-27 23.61211065909962 25.79319493707068 26.590130837849667 24.00456356598003 28-29 23.71602418919922 26.016924835879955 26.424174909744423 23.842876065176398 30-31 23.874297626575512 25.838001894570944 26.27705338996618 24.010647088887364 32-33 23.59461516360023 25.87174664496098 26.245082066303688 24.2885561251351 34-35 24.03017928502921 25.80580643422436 26.33229556227974 23.831718718466693 36-37 24.191446522780037 25.498916067376864 26.284250649149442 24.025386760693657 38-39 23.892201437788117 25.729064292339277 26.33445655729989 24.044277712572715 40-41 24.08872227572891 25.587039283854534 26.456546683686398 23.86769175673016 42-43 23.922925826076128 25.57441186906484 26.297080947918378 24.205581356940655 44-45 23.884515903254325 25.70032272239296 26.398145760535513 24.017015613817204 46-47 24.038568748933116 25.67115589485424 26.18710960998741 24.103165746225237 48-49 23.93599283328104 25.767021779695742 26.079217370085132 24.21776801693808 50-51 23.850435658219546 25.9238139492515 26.20235371030911 24.02339668221984 52-53 24.013380336611124 25.62256144171465 26.274351853954197 24.08970636772003 54-55 23.6752139845937 25.61469051004529 26.518179188630576 24.191916316730435 56-57 23.57355122267508 25.79472769945561 26.41714727186269 24.214573806006616 58-59 23.589147578765704 25.47156142727433 26.505242824018758 24.434048169941207 60-61 23.47219688729355 25.5022936311745 26.670845627741414 24.35466385379053 62-63 23.43308890119336 25.594908119640902 26.69283824409458 24.279164735071156 64-65 23.356188747528346 25.495144883494643 26.578608003595967 24.57005836538104 66-67 23.39806240650626 25.519985649893606 26.522600594739504 24.55935134886063 68-69 23.667783419104527 25.232634828531626 26.582819775235066 24.51676197712878 70-71 23.443068257460567 25.16293208876447 26.587978560351576 24.806021093423386 72-73 23.468262441512504 25.231767886099682 26.553279203887854 24.746690468499967 74-75 23.356976854833686 25.375504360703754 26.52129946621706 24.7462193182455 76-77 23.44584992722054 25.09437828984616 26.617792043512868 24.841979739420434 78-79 23.405698745384615 25.18098748474275 26.550528339983497 24.862785429889136 80-81 23.50482105289803 25.153122938698065 26.516999058324544 24.825056950079365 82-83 23.416815345459387 25.115920149832068 26.653523214847773 24.813741289860776 84-85 23.304555094409025 25.11356219503556 26.563437123352944 25.01844558720247 86-87 23.35474846058744 25.10090878299595 26.587165615631086 24.95717714078552 88-89 23.379697867930705 24.917634049054087 26.525905384256337 25.176762698758875 90-91 23.327047063520805 24.995409812136803 26.519894622107955 25.15764850223444 92-93 23.524222935054386 24.778131125872875 26.657415590227828 25.04023034884491 94-95 23.324214080862195 24.585573697630046 26.80128248117305 25.28892974033471 96-97 23.533940635877684 24.40465672766375 26.75463518700269 25.30676744945588 98 23.467072615913807 24.332991024585745 26.654883093454234 25.545053266046214 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 47.0 1 39.5 2 60.5 3 102.0 4 120.0 5 139.0 6 213.0 7 420.5 8 645.5 9 782.5 10 870.5 11 978.0 12 1097.5 13 1275.5 14 1408.5 15 1505.0 16 1687.5 17 1789.0 18 1813.0 19 1804.0 20 1891.0 21 2024.0 22 2250.0 23 2673.0 24 3257.0 25 4131.0 26 5526.0 27 7693.5 28 10550.0 29 14349.0 30 19645.5 31 27369.5 32 33732.0 33 38280.0 34 44750.5 35 52616.5 36 60575.5 37 67442.5 38 73469.5 39 78938.0 40 84780.5 41 90931.0 42 97640.0 43 105150.5 44 111668.0 45 116907.5 46 121617.0 47 126409.0 48 129623.0 49 130203.5 50 130077.0 51 130069.5 52 129881.5 53 130628.5 54 128219.5 55 122528.0 56 114150.5 57 104308.0 58 96202.0 59 84476.0 60 70910.0 61 58566.5 62 47717.0 63 37262.5 64 27601.0 65 20897.5 66 15783.0 67 12073.0 68 9384.5 69 7155.0 70 5272.0 71 4024.0 72 3346.5 73 2783.0 74 2209.5 75 1646.5 76 1155.0 77 721.0 78 430.5 79 257.5 80 148.5 81 91.5 82 63.0 83 40.5 84 23.5 85 11.0 86 9.5 87 7.0 88 5.0 89 6.0 90 3.5 91 3.0 92 3.5 93 2.5 94 0.5 95 0.5 96 2.0 97 2.0 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.38870587834524695 2 0.025221498805581874 3 0.01935831921311544 4 0.01703270049208127 5 0.02269934892502369 6 0.022502817765499675 7 0.014936368123825112 8 0.008581860632548639 9 0.0 10-11 0.0 12-13 0.005814046802585433 14-15 0.0030626105692492284 16-17 0.005666648432942422 18-19 0.03640739730182371 20-21 0.07895639333877288 22-23 0.09770874147668927 24-25 0.06426568916435278 26-27 0.07423964551019653 28-29 0.05746898656414728 30-31 0.052424686803030904 32-33 0.01971862633890947 34-35 0.3450104505444077 36-37 0.5271129474400342 38-39 0.4806169506159778 40-41 0.4883471762239223 42-43 0.4384446393014496 44-45 0.41163451362304865 46-47 0.4114707376567786 48-49 0.40056325830319583 50-51 0.3960921744240245 52-53 0.4590312782615902 54-55 0.46066903792429026 56-57 0.429764513089139 58-59 0.41443508264626583 60-61 0.429764513089139 62-63 0.4095218036581655 64-65 0.45831066401000214 66-67 0.47973256039811973 68-69 0.4220834202710754 70-71 0.37919049470495925 72-73 0.36582637585732625 74-75 0.3475162228283389 76-77 0.34525611449381266 78-79 0.34538713526682874 80-81 0.3613716695747819 82-83 0.35632736981366553 84-85 0.3568842080989836 86-87 0.3431270269323025 88-89 0.3864293924140938 90-91 0.3647782096731982 92-93 0.3531828712612813 94-95 0.3614535575579169 96-97 0.3612734039950199 98 0.3558196643182285 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 3052951.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.884315280865174 #Duplication Level Percentage of deduplicated Percentage of total 1 77.07689132941378 45.38619969910185 2 12.126050386616729 14.28068348154393 3 4.552576610780569 8.04226069468487 4 2.141414342583426 5.043828691825962 5 1.1796694728686643 3.4732014583805233 6 0.7220868203334901 2.5511752793204807 7 0.46783468835183306 1.9283687701764247 8 0.32464863169616964 1.5293369907438987 9 0.24781962076764133 1.313341981385961 >10 1.0848606969384567 10.991053681565628 >50 0.05157219781257345 2.039621096257759 >100 0.022620292902347256 2.3167268428993006 >500 0.0011170908203370347 0.4266763140505321 >1k 8.378181140449611E-4 0.6775250180627553 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.275519325400244E-5 2 0.0 0.0 0.0 0.0 3.275519325400244E-5 3 0.0 0.0 0.0 0.0 3.275519325400244E-5 4 0.0 0.0 0.0 0.0 3.275519325400244E-5 5 3.275519325400244E-5 0.0 0.0 0.0 3.275519325400244E-5 6 3.275519325400244E-5 0.0 0.0 0.0 3.275519325400244E-5 7 3.275519325400244E-5 0.0 0.0 0.0 3.275519325400244E-5 8 3.275519325400244E-5 0.0 0.0 0.0 3.275519325400244E-5 9 3.275519325400244E-5 0.0 0.0 0.0 3.275519325400244E-5 10-11 3.275519325400244E-5 0.0 0.0 0.0 3.275519325400244E-5 12-13 3.275519325400244E-5 0.0 0.0 1.637759662700122E-5 9.826557976200733E-5 14-15 3.275519325400244E-5 0.0 0.0 4.9132789881003666E-5 1.47398369643011E-4 16-17 3.275519325400244E-5 1.637759662700122E-5 0.0 6.551038650800488E-5 1.637759662700122E-4 18-19 3.275519325400244E-5 6.551038650800488E-5 0.0 1.3102077301600977E-4 2.2928635277801707E-4 20-21 3.275519325400244E-5 6.551038650800488E-5 0.0 2.1290875615101587E-4 2.2928635277801707E-4 22-23 3.275519325400244E-5 6.551038650800488E-5 0.0 2.620415460320195E-4 2.9479673928602194E-4 24-25 3.275519325400244E-5 6.551038650800488E-5 0.0 3.76684722421028E-4 2.9479673928602194E-4 26-27 3.275519325400244E-5 6.551038650800488E-5 0.0 8.516350246040635E-4 3.603071257940268E-4 28-29 3.275519325400244E-5 6.551038650800488E-5 0.0 0.004258175123020317 4.258175123020317E-4 30-31 3.275519325400244E-5 6.551038650800488E-5 0.0 0.020586638960140534 4.258175123020317E-4 32-33 3.275519325400244E-5 6.551038650800488E-5 0.0 0.05530714380938312 4.258175123020317E-4 34-35 3.275519325400244E-5 6.551038650800488E-5 0.0 0.10188502861657459 4.258175123020317E-4 36-37 3.275519325400244E-5 6.551038650800488E-5 0.0 0.1772547282940342 4.258175123020317E-4 38-39 3.275519325400244E-5 6.551038650800488E-5 0.0 0.3080462149572659 4.4219510892903294E-4 40-41 3.275519325400244E-5 9.826557976200732E-5 0.0 0.4647961922742946 4.5857270555603414E-4 42-43 3.275519325400244E-5 9.826557976200732E-5 0.0 0.6300297646441099 4.7495030218303535E-4 44-45 3.275519325400244E-5 9.826557976200732E-5 0.0 0.8248412765222894 4.913278988100366E-4 46-47 3.275519325400244E-5 9.826557976200732E-5 0.0 1.0602037176489238 4.913278988100366E-4 48-49 3.275519325400244E-5 9.826557976200732E-5 0.0 1.3194774498509803 5.240830920640391E-4 50-51 3.275519325400244E-5 9.826557976200732E-5 0.0 1.6064948307391766 5.240830920640391E-4 52-53 3.275519325400244E-5 9.826557976200732E-5 0.0 1.8960507391045582 5.568382853180415E-4 54-55 3.275519325400244E-5 9.826557976200732E-5 0.0 2.2200487331765233 5.568382853180415E-4 56-57 3.275519325400244E-5 9.826557976200732E-5 0.0 2.597519580235647 5.568382853180415E-4 58-59 3.275519325400244E-5 9.826557976200732E-5 0.0 3.0042899476604763 5.568382853180415E-4 60-61 3.275519325400244E-5 9.826557976200732E-5 0.0 3.442783719751807 5.568382853180415E-4 62-63 3.275519325400244E-5 9.826557976200732E-5 0.0 3.9008978526022857 6.223486718260463E-4 64-65 3.275519325400244E-5 9.826557976200732E-5 0.0 4.377322138481752 6.223486718260463E-4 66-67 3.275519325400244E-5 9.826557976200732E-5 0.0 4.920550641002754 6.223486718260463E-4 68-69 3.275519325400244E-5 9.826557976200732E-5 0.0 5.524245230270646 6.223486718260463E-4 70-71 3.275519325400244E-5 9.826557976200732E-5 0.0 6.174828878681643 6.551038650800488E-4 72-73 3.275519325400244E-5 1.3102077301600977E-4 0.0 6.833077242314076 7.042366549610524E-4 74-75 3.275519325400244E-5 1.3102077301600977E-4 0.0 7.497156030345721 7.697470414690573E-4 76-77 3.275519325400244E-5 1.3102077301600977E-4 0.0 8.21375777076016 7.861246380960585E-4 78-79 3.275519325400244E-5 1.3102077301600977E-4 0.0 9.006515335490153 7.861246380960585E-4 80-81 3.275519325400244E-5 1.3102077301600977E-4 0.0 9.841608987500946 7.861246380960585E-4 82-83 3.275519325400244E-5 1.3102077301600977E-4 0.0 10.692326866693897 8.18879831350061E-4 84-85 3.275519325400244E-5 1.3102077301600977E-4 1.637759662700122E-5 11.541816426139825 8.18879831350061E-4 86 3.275519325400244E-5 1.3102077301600977E-4 3.275519325400244E-5 12.191155377207167 8.18879831350061E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2620 0.0 44.616425 1 GTATCAA 4980 0.0 44.26582 1 ATCAACG 5925 0.0 36.22323 3 TCAACGC 5930 0.0 36.11535 4 CAACGCA 6170 0.0 34.85919 5 TATCAAC 6485 0.0 33.66152 2 AACGCAG 6490 0.0 33.27682 6 GTACATG 9755 0.0 26.985538 1 ACGCAGA 7870 0.0 26.85516 7 CGCAGAG 7920 0.0 26.221241 8 TACATGG 10015 0.0 25.505919 2 ACATGGG 10245 0.0 24.753853 3 GCAGAGT 8750 0.0 22.790897 9 CATGGGG 6990 0.0 21.584816 4 GAGTACA 7325 0.0 21.487247 1 GTACTAG 485 0.0 20.875807 1 GTATAGG 620 0.0 20.041693 1 AGTACAT 7420 0.0 19.839827 2 AGAGTAC 7735 0.0 18.521538 10-11 GTGTAGC 2170 0.0 18.239002 1 >>END_MODULE