##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920898_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4893842 Sequences flagged as poor quality 0 Sequence length 98 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.566392417246 31.0 29.0 33.0 22.0 34.0 2 28.586202210860097 31.0 28.0 34.0 16.0 34.0 3 28.67078871773956 31.0 28.0 34.0 20.0 34.0 4 32.1425996180506 35.0 32.0 37.0 22.0 37.0 5 32.10555162998724 35.0 32.0 37.0 22.0 37.0 6 32.2310191052347 35.0 32.0 37.0 23.0 37.0 7 32.06309459929438 35.0 32.0 37.0 22.0 37.0 8 32.00493722519035 35.0 32.0 37.0 22.0 37.0 9 33.267305932639424 37.0 33.0 39.0 21.0 39.0 10-11 33.080440377928014 37.0 32.0 39.0 19.0 39.0 12-13 32.905801311117116 37.0 32.0 39.0 18.0 39.0 14-15 33.66338001921599 38.0 32.0 40.0 17.0 41.0 16-17 33.55699550578053 38.0 32.0 40.0 17.0 41.0 18-19 33.43758829974486 38.0 32.0 40.0 17.5 41.0 20-21 33.33875490871998 38.0 32.0 40.0 16.5 41.0 22-23 33.12062424573576 38.0 32.0 40.0 15.5 41.0 24-25 32.92960520588936 38.0 32.0 40.0 12.0 41.0 26-27 32.96579282698542 38.0 32.0 40.0 10.5 41.0 28-29 32.807718557321635 38.0 31.5 40.0 10.0 41.0 30-31 32.55889677271968 38.0 31.0 40.0 9.0 41.0 32-33 32.31615395429603 37.0 30.5 40.0 8.5 41.0 34-35 31.99490328866359 37.0 30.0 40.0 7.0 41.0 36-37 31.69070681072254 37.0 30.0 40.0 2.0 41.0 38-39 31.486470037242725 37.0 30.0 40.0 2.0 41.0 40-41 31.2904543097223 37.0 30.0 40.0 2.0 41.0 42-43 31.0556685320041 36.0 29.5 40.0 2.0 41.0 44-45 30.781565792275273 36.0 29.0 39.0 2.0 41.0 46-47 30.530846929672023 36.0 28.0 39.0 2.0 40.0 48-49 30.231711403841807 35.5 28.0 39.0 2.0 40.0 50-51 29.08475947936202 34.0 25.5 38.0 2.0 39.5 52-53 29.5261286531114 34.5 27.5 38.5 2.0 39.5 54-55 30.171801929853885 35.5 28.0 39.0 2.0 40.0 56-57 30.1216432814954 35.0 28.0 39.0 2.0 41.0 58-59 29.876656929259262 35.0 28.0 39.0 2.0 40.0 60-61 29.550080591077524 35.0 27.5 39.0 2.0 40.0 62-63 29.15982361097886 34.5 26.5 38.5 2.0 40.0 64-65 28.742254040894657 34.0 26.0 38.0 2.0 40.0 66-67 28.360821620313857 34.0 26.0 37.5 2.0 40.0 68-69 27.919220113767466 34.0 25.5 37.0 2.0 39.5 70-71 27.58186788621292 34.0 25.0 36.5 2.0 39.0 72-73 27.12562205727116 33.0 24.0 36.0 2.0 39.0 74-75 26.686083960209587 33.0 23.0 35.5 2.0 38.5 76-77 26.265890684660437 33.0 21.5 35.0 2.0 37.5 78-79 25.802803400681917 32.0 20.0 35.0 2.0 37.0 80-81 25.35756579390998 32.0 18.5 35.0 2.0 36.0 82-83 24.876781269195043 32.0 16.5 35.0 2.0 36.0 84-85 24.48050662444762 31.0 10.0 34.5 2.0 35.5 86-87 24.022340014246474 31.0 4.5 34.0 2.0 35.0 88-89 23.48392663678149 31.0 2.0 34.0 2.0 35.0 90-91 22.983587741492265 31.0 2.0 34.0 2.0 35.0 92-93 22.4410331391982 30.0 2.0 34.0 2.0 35.0 94-95 21.79777452970488 30.0 2.0 34.0 2.0 35.0 96-97 21.146680154365427 29.0 2.0 34.0 2.0 35.0 98 20.74492127044559 29.0 2.0 34.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 250907.0 3 42845.0 4 31601.0 5 25786.0 6 23966.0 7 24341.0 8 28334.0 9 31987.0 10 34974.0 11 37447.0 12 39532.0 13 38634.0 14 36333.0 15 38345.0 16 40839.0 17 43739.0 18 44733.0 19 45189.0 20 47005.0 21 49929.0 22 54759.0 23 61202.0 24 69583.0 25 80165.0 26 92304.0 27 106051.0 28 122896.0 29 142474.0 30 165481.0 31 194536.0 32 230152.0 33 279811.0 34 346435.0 35 438389.0 36 555210.0 37 603578.0 38 357979.0 39 36367.0 40 4.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.817426136414916 17.446689974375744 12.275664667651816 25.460219221557523 2 16.314208781681046 19.47093913780706 38.450278114227345 25.764573966284555 3 19.8163455711712 22.9792034760678 28.505595369603004 28.698855583157997 4 13.498355723331521 15.041325084053184 35.826613063921705 35.633706128693596 5 14.739207149839773 36.36202358876485 33.940482995973845 14.958286265421533 6 34.49602318539631 34.22094186584804 16.872056222133427 14.410978726622226 7 29.949410373550663 30.944056301345285 20.545531685651913 18.561001639452144 8 27.25742081975967 33.77639622337285 19.92646771820023 19.03971523866725 9 26.987528408150485 15.570261565453073 19.09955409267402 38.34265593372242 10-11 25.979343419482454 24.897881826949796 27.34813561538587 21.77463913818188 12-13 26.680992917047863 22.135119455466253 27.20225740618169 23.981630221304194 14-15 23.533647118973132 23.798110644943005 24.575940337747838 28.092301898336025 16-17 23.904618694146603 26.823782733975694 25.433690023323518 23.837908548554186 18-19 23.95574728656088 26.090654632965926 26.693654731697762 23.259943348775426 20-21 24.522784279076987 25.402916213488925 26.49902950006907 23.575270007365024 22-23 24.159773633122725 25.216634422872563 26.43898733384952 24.184604610155194 24-25 24.017053882675118 25.4204761301566 26.409840150009718 24.152629837158567 26-27 23.797781123033086 25.62806270898402 26.37366974382213 24.200486424160765 28-29 23.879591817332113 25.88445933257159 26.23611568726332 23.999833162832974 30-31 24.089451192809328 25.647404147753548 26.076355907496403 24.186788751940718 32-33 23.74232249878803 25.72357357688783 26.017184604203507 24.516919320120635 34-35 24.23474497992174 25.633282860022167 26.06491681130329 24.06705534875281 36-37 24.364285516950552 25.40966155582297 26.065806096594198 24.16024683063228 38-39 24.06920497349282 25.50772620926336 26.09952467442051 24.323544142823312 40-41 24.308990907895332 25.379251776282135 26.26901751452631 24.042739801296225 42-43 24.191664103892556 25.363634302036292 26.070693161902987 24.374008432168168 44-45 24.026667481884818 25.460104133176554 26.208131760044367 24.305096624894258 46-47 24.162331765697456 25.49233628354171 26.031482111429487 24.313849839331343 48-49 23.991178191122987 25.546011235384558 25.93036777744145 24.53244279605101 50-51 23.92747252792339 25.706226279197576 26.101031924781886 24.265269268097146 52-53 24.122155298740715 25.397994922956574 26.172452390145356 24.307397388157355 54-55 23.68779869992246 25.36976054741403 26.458697366847765 24.48374338581574 56-57 23.6684082831749 25.52096126888675 26.327620905061895 24.483009542876456 58-59 23.69704497881122 25.207261019416862 26.318066414625445 24.777627587146473 60-61 23.520669336480115 25.20842633919983 26.659199862429123 24.61170446189093 62-63 23.571851586043948 25.227083668656498 26.60778930451693 24.593275440782623 64-65 23.399245071090952 25.190061327453954 26.463339311376256 24.947354290078835 66-67 23.443877317950328 25.16139768045595 26.466714798449615 24.928010203144115 68-69 23.693692584544483 24.9364518505295 26.448116024106028 24.92173954081999 70-71 23.45810887170794 24.923336932923533 26.447891573369596 25.17066262199893 72-73 23.515321255674316 24.96771852377909 26.450251663753395 25.0667085567932 74-75 23.53035012589991 25.0839512139261 26.407076681097752 24.978621979076244 76-77 23.572190134073104 24.789920015418716 26.596123997629782 25.0417658528784 78-79 23.506064399193395 24.91618714292012 26.50396177342285 25.073786684463634 80-81 23.683408606578222 24.85089581450135 26.490990588246877 24.974704990673555 82-83 23.623175463406636 24.832398903886215 26.5188319069712 25.025593725735945 84-85 23.527753797191913 24.79757537479776 26.564348740831274 25.110322087179053 86-87 23.655996872072567 24.793981405070088 26.496032374951074 25.05398934790627 88-89 23.669087886761396 24.585537332818074 26.411431424335436 25.333943356085094 90-91 23.63666863605239 24.609781701692818 26.483186360831525 25.27036330142327 92-93 23.85350081093276 24.338214992377676 26.610077547912393 25.198206648777173 94-95 23.730976854369633 24.22389913272584 26.686828965792174 25.358295047112357 96-97 23.9732192110337 23.957931312528117 26.65920351996942 25.40964595646876 98 23.9885634089785 23.9365397565695 26.559827815449527 25.515069019002475 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 59.0 1 65.5 2 126.5 3 208.0 4 227.0 5 260.5 6 410.0 7 725.0 8 1126.5 9 1342.0 10 1388.0 11 1524.5 12 1719.0 13 1915.0 14 2168.5 15 2398.5 16 2532.0 17 2677.5 18 2804.0 19 2834.0 20 2904.5 21 3024.5 22 3272.5 23 3806.5 24 4576.0 25 5706.5 26 7347.5 27 9716.0 28 13089.5 29 17665.5 30 24477.0 31 34956.0 32 44300.0 33 52162.5 34 61750.5 35 73661.0 36 86856.0 37 99312.5 38 110721.5 39 122211.0 40 134892.5 41 146132.5 42 158051.0 43 170596.0 44 182012.5 45 194087.5 46 205522.5 47 213827.0 48 218783.0 49 220517.0 50 220490.0 51 219963.0 52 217822.5 53 216800.5 54 212730.5 55 203460.5 56 188625.5 57 170531.5 58 156520.0 59 137381.0 60 113701.0 61 93170.5 62 75891.5 63 58760.0 64 43220.5 65 32889.5 66 24769.5 67 18330.0 68 13655.5 69 10582.0 70 8033.5 71 5993.0 72 4842.0 73 3992.0 74 3145.0 75 2338.0 76 1619.5 77 1021.5 78 603.0 79 349.0 80 227.5 81 140.0 82 90.5 83 61.0 84 37.0 85 24.5 86 17.5 87 18.5 88 17.0 89 11.5 90 7.0 91 6.5 92 4.5 93 4.0 94 4.0 95 1.5 96 2.0 97 4.0 98 2.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.3836249719545502 2 0.025501436294837473 3 0.019555187928012387 4 0.016530979136637432 5 0.02225245522842789 6 0.022620264405757276 7 0.015202779329614646 8 0.009828678571968608 9 0.0 10-11 4.0867686369931845E-5 12-13 0.005333233071276106 14-15 0.003300065674371996 16-17 0.005792994542937839 18-19 0.03684221926249356 20-21 0.07839443937912176 22-23 0.09782702424802436 24-25 0.06590936119310759 26-27 0.07490025219449259 28-29 0.05814450078282053 30-31 0.053454933771870855 32-33 0.01990256326215681 34-35 0.3407752027956767 36-37 0.5190707015060968 38-39 0.4736667019491026 40-41 0.4828006298527823 42-43 0.43304422169739026 44-45 0.40644957479215715 46-47 0.40532571341698403 48-49 0.39501683953016875 50-51 0.39161460463987185 52-53 0.45177183897641154 54-55 0.4538254402165006 56-57 0.42467656291314676 58-59 0.4094124820539773 60-61 0.4233381461845315 62-63 0.40484551810213737 64-65 0.452098780467371 66-67 0.4737893050082123 68-69 0.4162782533641257 70-71 0.37367369032347186 72-73 0.35950282007469797 74-75 0.34233839179932657 76-77 0.34026435671605254 78-79 0.33934483377272906 80-81 0.3552627976138175 82-83 0.3506140982892378 84-85 0.3517073088996335 86-87 0.33697450796327305 88-89 0.38035555704495566 90-91 0.35826657256200756 92-93 0.34840724322526145 94-95 0.3558349452229966 96-97 0.3562844897730658 98 0.3517481765860034 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 4893842.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.97226627717831 #Duplication Level Percentage of deduplicated Percentage of total 1 73.43597961969002 38.166342871199696 2 12.530612277829928 13.024886358389137 3 5.259864776664521 8.201012782642785 4 2.7997572058793803 5.820389080616476 5 1.6504286681189835 4.288825910548427 6 1.038499808898759 3.238391315813106 7 0.690812914010382 2.513217890026274 8 0.50935245503708 2.1177761137697293 9 0.35324435763996126 1.6523018834557388 >10 1.6317846667542868 14.390302373491409 >50 0.06801276825662822 2.4010481410209903 >100 0.029005484894108705 2.6564489359412633 >500 0.0015001492651928734 0.5158894014030873 >1k 0.0011448470607098816 1.013166941682037 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 4.0867686369931845E-5 0.0 4 0.0 0.0 0.0 6.130152955489776E-5 0.0 5 0.0 0.0 0.0 6.130152955489776E-5 0.0 6 0.0 0.0 0.0 6.130152955489776E-5 2.0433843184965922E-5 7 0.0 0.0 0.0 6.130152955489776E-5 2.0433843184965922E-5 8 0.0 0.0 0.0 6.130152955489776E-5 2.0433843184965922E-5 9 0.0 0.0 0.0 8.173537273986369E-5 4.0867686369931845E-5 10-11 0.0 0.0 0.0 1.0216921592482962E-4 4.0867686369931845E-5 12-13 1.0216921592482961E-5 0.0 0.0 1.2260305910979553E-4 1.328199807022785E-4 14-15 2.0433843184965922E-5 0.0 0.0 1.532538238872444E-4 2.452061182195911E-4 16-17 2.0433843184965922E-5 0.0 0.0 1.6347074547972738E-4 3.2694149095945476E-4 18-19 2.0433843184965922E-5 0.0 0.0 1.839045886646933E-4 3.2694149095945476E-4 20-21 2.0433843184965922E-5 0.0 0.0 2.2477227503462516E-4 3.2694149095945476E-4 22-23 2.0433843184965922E-5 0.0 0.0 3.678091773293866E-4 3.473753341444207E-4 24-25 2.0433843184965922E-5 0.0 0.0 7.254014330662903E-4 3.678091773293866E-4 26-27 2.0433843184965922E-5 0.0 0.0 0.001563189003649893 4.291107068842844E-4 28-29 4.0867686369931845E-5 0.0 0.0 0.006998591290850828 4.495445500692503E-4 30-31 4.0867686369931845E-5 0.0 0.0 0.03164180617191973 4.5976147166173326E-4 32-33 4.0867686369931845E-5 0.0 0.0 0.08160255275916141 4.699783932542162E-4 34-35 4.0867686369931845E-5 0.0 0.0 0.14832926767966764 5.31279922809114E-4 36-37 4.0867686369931845E-5 0.0 0.0 0.25659798579520954 5.31279922809114E-4 38-39 4.0867686369931845E-5 0.0 0.0 0.439848691477984 5.925814523640117E-4 40-41 4.0867686369931845E-5 0.0 0.0 0.6503990116558729 5.925814523640117E-4 42-43 4.0867686369931845E-5 0.0 0.0 0.8692148214020804 6.130152955489776E-4 44-45 4.0867686369931845E-5 0.0 0.0 1.1331281230575079 6.538829819189095E-4 46-47 4.0867686369931845E-5 0.0 0.0 1.4467263144171798 6.845337466963584E-4 48-49 4.0867686369931845E-5 0.0 0.0 1.784252536146447 7.049675898813243E-4 50-51 4.0867686369931845E-5 0.0 0.0 2.156107614426457 7.76486041028705E-4 52-53 4.0867686369931845E-5 0.0 0.0 2.5276868358234696 8.377875705836028E-4 54-55 4.0867686369931845E-5 0.0 0.0 2.943260121597714 8.786552569535346E-4 56-57 4.0867686369931845E-5 0.0 0.0 3.426551163686936 8.888721785460176E-4 58-59 4.0867686369931845E-5 0.0 0.0 3.9423831010482155 8.990891001385006E-4 60-61 4.0867686369931845E-5 0.0 0.0 4.499379015505609 9.399567865084324E-4 62-63 4.0867686369931845E-5 0.0 0.0 5.054730005586613 0.0010012583160633301 64-65 4.0867686369931845E-5 0.0 0.0 5.64704581798922 0.001011475237655813 66-67 4.0867686369931845E-5 0.0 0.0 6.330946115546844 0.001042126002433262 68-69 4.0867686369931845E-5 0.0 0.0 7.069169785211701 0.001062559845618228 70-71 6.130152955489776E-5 0.0 0.0 7.841895999094373 0.001062559845618228 72-73 6.130152955489776E-5 0.0 0.0 8.629998679973731 0.0011340782967656088 74-75 6.130152955489776E-5 0.0 0.0 9.434530170773801 0.0011647290615430575 76-77 6.130152955489776E-5 0.0 1.0216921592482961E-5 10.305267313493161 0.0011749459831355406 78-79 7.151845114738073E-5 0.0 2.0433843184965922E-5 11.255011910887193 0.0012055967479129893 80-81 8.173537273986369E-5 0.0 2.0433843184965922E-5 12.227356338843796 0.0012464644342829213 82-83 8.173537273986369E-5 0.0 2.0433843184965922E-5 13.221779534361755 0.001307765963837819 84-85 8.173537273986369E-5 2.0433843184965922E-5 2.0433843184965922E-5 14.22543882699932 0.001307765963837819 86 1.0216921592482962E-4 2.0433843184965922E-5 2.0433843184965922E-5 15.010353828341822 0.001307765963837819 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 6780 0.0 43.918682 1 GGTATCA 3700 0.0 38.932953 1 TCAACGC 8275 0.0 35.30808 4 ATCAACG 8390 0.0 34.76945 3 CAACGCA 8505 0.0 34.46111 5 AACGCAG 8995 0.0 32.782787 6 TATCAAC 9005 0.0 32.44712 2 ACGCAGA 10900 0.0 26.627956 7 GTACATG 13915 0.0 25.831078 1 CGCAGAG 11305 0.0 25.509691 8 TACATGG 14550 0.0 24.08523 2 ACATGGG 14925 0.0 23.171795 3 GCAGAGT 12815 0.0 21.6101 9 CATGGGG 10410 0.0 20.047646 4 GAGTACA 10380 0.0 19.065395 1 TAAGGCG 1860 0.0 18.988054 5 AGAGTAC 11025 0.0 18.0702 10-11 AGTACAT 10620 0.0 17.276506 2 CAGAGTA 12030 0.0 16.751163 10-11 GTATTAA 3305 0.0 16.571058 1 >>END_MODULE