##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920898_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4893842 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.234619957080756 31.0 30.0 34.0 26.0 34.0 2 30.25051094824884 31.0 30.0 34.0 26.0 34.0 3 30.392588072929204 31.0 30.0 34.0 27.0 34.0 4 34.03475817159606 35.0 35.0 37.0 30.0 37.0 5 33.55306260398272 35.0 35.0 37.0 28.0 37.0 6 33.489831506615864 35.0 35.0 37.0 28.0 37.0 7 33.300409371614364 35.0 33.0 37.0 27.0 37.0 8 33.23040711163131 35.0 33.0 37.0 27.0 37.0 9 34.55942570275052 38.0 34.0 39.0 27.0 39.0 10-11 34.37304861906044 37.5 34.0 39.0 27.0 39.0 12-13 34.189627903802375 37.0 34.0 39.0 26.0 39.0 14-15 35.090623685848456 38.0 34.0 40.0 26.0 41.0 16-17 34.966283750067944 38.0 34.0 40.0 25.0 41.0 18-19 34.87059829475492 38.0 34.0 40.0 25.0 41.0 20-21 34.74910448682242 38.0 34.0 40.0 25.0 41.0 22-23 34.602630918611595 38.0 33.5 40.0 24.0 41.0 24-25 34.42387933652129 38.0 33.0 40.0 24.0 41.0 26-27 34.240421125160964 38.0 33.0 40.0 23.0 41.0 28-29 34.18090776122319 38.0 33.0 40.0 22.5 41.0 30-31 34.16744553665607 38.0 33.0 40.0 22.5 41.0 32-33 34.021434692824165 38.0 33.0 40.0 22.0 41.0 34-35 33.85800706275356 38.0 33.0 40.0 20.5 41.0 36-37 33.66305440592484 38.0 32.5 40.0 19.0 41.0 38-39 33.479008312896084 38.0 32.0 40.0 18.0 41.0 40-41 33.24481215372299 38.0 32.0 40.0 16.5 41.0 42-43 33.27815650770907 38.0 32.0 40.0 16.0 41.0 44-45 33.13752507743405 38.0 32.0 40.0 15.0 41.0 46-47 32.89243829285866 37.5 31.5 40.0 14.0 41.0 48-49 32.626844409770484 37.0 31.0 40.0 10.5 41.0 50-51 32.367251129072 37.0 31.0 40.0 9.0 41.0 52-53 32.10816430117687 37.0 31.0 40.0 8.0 41.0 54-55 31.820816139957113 36.0 30.0 40.0 7.0 41.0 56-57 31.488844654159248 36.0 30.0 39.0 4.0 41.0 58-59 31.153148283087194 35.5 29.5 39.0 2.0 40.0 60-61 30.824916497099824 35.0 29.0 39.0 2.0 40.0 62-63 30.507346375301857 35.0 29.0 38.5 2.0 40.0 64-65 30.1022787413243 35.0 28.0 38.0 2.0 40.0 66-67 29.670988152049045 34.0 28.0 38.0 2.0 40.0 68-69 29.231436670820187 34.0 28.0 37.0 2.0 39.5 70-71 28.79995349257291 34.0 26.5 36.5 2.0 39.0 72-73 28.363432758965246 34.0 26.0 36.0 2.0 39.0 74-75 27.922187516474786 33.0 26.0 35.5 2.0 38.5 76-77 26.474560069573148 31.5 24.5 34.0 2.0 36.0 78-79 27.32640408088369 33.0 26.0 35.0 2.0 37.0 80-81 27.35491644397183 33.0 26.0 35.0 2.0 36.5 82-83 27.02236116327417 33.0 25.5 35.0 2.0 36.0 84-85 26.712607599509752 33.0 25.0 35.0 2.0 36.0 86-87 26.184876115738923 32.5 24.0 35.0 2.0 35.0 88-89 25.82166639217204 32.0 23.0 35.0 2.0 35.0 90-91 25.457658420521135 32.0 20.5 34.5 2.0 35.0 92-93 25.1539207845288 32.0 19.5 34.0 2.0 35.0 94-95 24.77596691924259 32.0 17.5 34.0 2.0 35.0 96-97 24.251723288165003 32.0 6.0 34.0 2.0 35.0 98-99 23.65660967395351 31.0 2.0 34.0 2.0 35.0 100-101 21.46257602922203 28.0 2.0 33.0 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 116212.0 3 53016.0 4 28186.0 5 20175.0 6 17387.0 7 17056.0 8 19230.0 9 22530.0 10 25486.0 11 28268.0 12 31363.0 13 34264.0 14 36538.0 15 39085.0 16 41147.0 17 42176.0 18 41460.0 19 40293.0 20 40370.0 21 42198.0 22 45847.0 23 51513.0 24 60922.0 25 71676.0 26 84876.0 27 100630.0 28 118694.0 29 140271.0 30 165005.0 31 194907.0 32 233922.0 33 285881.0 34 359257.0 35 467075.0 36 619413.0 37 718283.0 38 410256.0 39 28974.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.89914437804188 18.7090146272395 12.933499873170673 25.458341121547946 2 16.36470895464136 20.459201584358468 37.33823037196542 25.837859089034747 3 19.61411347709049 23.77557910363088 28.82171202300638 27.788595396272253 4 13.96144059370834 15.943711008205916 35.35982859397892 34.73501980410682 5 14.705192361452834 36.58864746185549 34.00826321304851 14.69789696364317 6 34.46416162895569 34.70883145356295 16.628302127242627 14.198704790238736 7 29.822534487856732 31.106036282974873 20.557187481135657 18.514241748032738 8 27.242282125391565 34.064115445528714 19.804831521569007 18.888770907510715 9 26.8355189841195 15.523256789514114 19.044403436634543 38.59682078973184 10-11 25.97999243901501 25.067713366659493 27.348845763270795 21.6034484310547 12-13 26.629047571411125 22.190571229667142 27.2664793997147 23.91390179920703 14-15 23.494072153770492 23.90376987780159 24.540405751418337 28.061752217009577 16-17 23.892834329394617 26.959045482391105 25.40129055845136 23.746829629762917 18-19 23.962409404683672 26.135030311681323 26.66266389622054 23.239896387414465 20-21 24.517072829709967 25.467442838798192 26.446604505848477 23.56887982564336 22-23 24.153992488749896 25.266446095614235 26.47015214739785 24.109409268238014 24-25 23.982455213124528 25.539848442826564 26.420563540304588 24.057132803744327 26-27 23.792899151179938 25.740865791350267 26.340678187036897 24.125556870432895 28-29 23.864133591624594 25.90702352780166 26.27814771519453 23.950695165379212 30-31 24.070072978975368 25.697659873745103 26.09468463051251 24.137582516767015 32-33 23.752138182083534 25.713792811293096 26.047204601272796 24.486864405350573 34-35 24.17981101729114 25.703882262425527 26.071702329189865 24.04460439109347 36-37 24.30029833376408 25.493490319047385 26.095574107780926 24.11063723940761 38-39 24.05537287005312 25.513106087898556 26.135422335666085 24.29609870638224 40-41 24.226765563715222 25.425895683916423 26.307047538849247 24.04029121351911 42-43 24.178062189276883 25.387510440460204 26.115220990337047 24.31920637992587 44-45 23.931532653302327 25.489471483214587 26.297602749665717 24.281393113817373 46-47 24.09110285921087 25.50825481303784 26.086715677271595 24.313926650479697 48-49 23.917734342989508 25.558398378228702 25.999245925391573 24.52462135339022 50-51 23.85969085735552 25.69345367468881 26.132604385662123 24.31425108229355 52-53 24.105624086036975 25.398373442124733 26.16554041627261 24.330462055565683 54-55 23.685413042625267 25.374291268294595 26.369550449926106 24.570745239154036 56-57 23.639886982801894 25.546656274844352 26.18421459984962 24.62924214250413 58-59 23.62687214056219 25.27229602855775 26.177057962511924 24.923773868368134 60-61 23.447651503817486 25.378049308895534 26.436340069016428 24.73795911827055 62-63 23.462056670121022 25.405341998721937 26.30184677654533 24.83075455461171 64-65 23.22460057568067 25.32975553444597 26.231214537863046 25.21442935201031 66-67 23.27103988225434 25.365727018132013 26.181381467323533 25.181851632290115 68-69 23.48964483910856 25.156346956280935 26.12948379018809 25.22452441442241 70-71 23.24371879144173 25.07405541850011 26.12050367597128 25.561722114086887 72-73 23.271780545014987 25.094282498330838 26.100470145033956 25.533466811620215 74-75 23.163249925709685 25.213877369544058 25.964705504600477 25.658167200145776 76-77 23.147110532755047 24.87001071870642 26.267273223565173 25.715605524973356 78-79 22.988759260940732 25.0037628642923 26.181989295469105 25.82548857929787 80-81 23.084215243016722 24.98029083220971 26.125297681241317 25.810196243532253 82-83 22.96196764227584 24.95266199936954 26.129002757359988 25.956367600994636 84-85 22.69448287919585 24.86421244443963 26.155592843026366 26.285711833338155 86-87 22.751137707473344 24.858088766178472 26.088331009976095 26.30244251637209 88-89 22.67168889412509 24.70205583172392 26.007750670853707 26.618504603297282 90-91 22.468977664574112 24.721420539355773 26.064344769082044 26.745257026988075 92-93 22.55676863618398 24.504078319315152 26.143157184593484 26.795995859907386 94-95 22.234707431795457 24.34681255766874 26.303107989604378 27.11537202093142 96-97 22.342993675965655 24.129345634352394 26.327334551583103 27.200326138098845 98-99 22.11957751695424 24.207389621834253 26.196625755118202 27.47640710609331 100-101 22.29490455224775 23.934711781842935 26.335156363110258 27.43522730279906 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 56.0 1 53.0 2 93.0 3 163.0 4 150.5 5 136.0 6 246.0 7 493.5 8 742.5 9 779.0 10 653.5 11 595.0 12 593.5 13 618.0 14 711.5 15 816.5 16 903.0 17 1007.5 18 1150.0 19 1301.5 20 1516.0 21 1810.5 22 2270.0 23 2890.5 24 3483.0 25 4361.5 26 5730.5 27 7730.5 28 10416.0 29 13968.0 30 19355.0 31 27042.5 32 37819.5 33 46614.0 34 53350.0 35 63229.0 36 75216.5 37 87743.0 38 99468.5 39 110136.0 40 121546.0 41 133350.0 42 144128.5 43 156816.5 44 169283.5 45 181173.0 46 193364.5 47 202820.0 48 211249.5 49 217684.5 50 219152.0 51 218875.0 52 217317.5 53 217337.0 54 214844.5 55 204304.5 56 189707.5 57 172364.5 58 156822.0 59 138572.5 60 115896.0 61 95340.5 62 77726.0 63 59822.5 64 43961.5 65 33319.0 66 25098.0 67 18702.0 68 13985.0 69 10530.5 70 8234.0 71 6299.5 72 4770.0 73 4115.0 74 3312.5 75 2376.5 76 1691.0 77 1106.0 78 636.5 79 354.0 80 202.5 81 117.5 82 67.5 83 35.0 84 18.0 85 9.5 86 4.5 87 4.0 88 4.0 89 3.0 90 1.5 91 0.0 92 0.5 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.19054558769980723 2 0.0 3 0.012055967479129895 4 0.013588505718002339 5 0.007070109741998209 6 0.10652162452322736 7 0.14256692390150724 8 0.12393125891681832 9 0.14238301931284253 10-11 0.11422518340395951 12-13 0.11510383866091305 14-15 0.11700418607711487 16-17 0.06632825497839939 18-19 0.07960003612703476 20-21 0.036780917732938664 22-23 0.08398309549020994 24-25 0.05755191933045652 26-27 0.06599109656584745 28-29 0.0398153434459061 30-31 0.024520611821959106 32-33 0.031539636955994904 34-35 0.019626706379159767 36-37 0.023856511918447714 38-39 0.03176440923102953 40-41 0.024765817940178698 42-43 0.012648548931493907 44-45 0.02697267300415502 46-47 0.033419550529011764 48-49 0.00872525103998045 50-51 0.015550154663759067 52-53 0.006497962132819163 54-55 0.012137702851869757 56-57 0.005118677717833964 58-59 0.0036576579301089004 60-61 0.022354624444352718 62-63 0.010319090808407792 64-65 0.006753385172631237 66-67 0.03968252346520382 68-69 0.08982717464111019 70-71 0.0215270537953616 72-73 0.04413710127952639 74-75 0.08665992894744047 76-77 0.2490783315031421 78-79 0.0807136805806154 80-81 0.016643365274154744 82-83 0.011739242909762923 84-85 0.012842670441751082 86-87 0.2651086814817479 88-89 0.6183893963066237 90-91 0.26489412612830576 92-93 0.35022585526872346 94-95 0.001052342924025745 96-97 0.00428089014725036 98-99 0.0031570287720772347 100-101 0.005077810031464031 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4893842.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.04531553801091 #Duplication Level Percentage of deduplicated Percentage of total 1 70.81803375051848 34.73292811075686 2 13.507038261468104 13.249139070353788 3 5.86059046654142 8.623035260117474 4 3.113553452970664 6.108208461816385 5 1.8248833525658246 4.475098992332704 6 1.1601506087196127 3.41399716057613 7 0.7898510371063996 2.711694534003597 8 0.5518895539242568 2.165407785147781 9 0.3908588157553285 1.7252814554580018 >10 1.8656678495140997 15.513485056285187 >50 0.08094371527118267 2.7198198519063856 >100 0.033700975226362805 2.9639067802050643 >500 0.0015025570537825978 0.5016879446152547 >1k 0.0013356033644166885 1.0963095364254167 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.0867686369931845E-5 2 0.0 0.0 0.0 0.0 4.0867686369931845E-5 3 0.0 0.0 0.0 0.0 4.0867686369931845E-5 4 0.0 0.0 0.0 0.0 4.0867686369931845E-5 5 0.0 0.0 0.0 0.0 4.0867686369931845E-5 6 0.0 0.0 0.0 0.0 8.173537273986369E-5 7 0.0 0.0 0.0 0.0 8.173537273986369E-5 8 0.0 0.0 0.0 0.0 8.173537273986369E-5 9 0.0 0.0 0.0 8.173537273986369E-5 8.173537273986369E-5 10-11 0.0 0.0 0.0 1.0216921592482962E-4 8.173537273986369E-5 12-13 0.0 0.0 0.0 1.0216921592482962E-4 8.173537273986369E-5 14-15 0.0 0.0 0.0 1.328199807022785E-4 1.1238613751731258E-4 16-17 0.0 0.0 0.0 1.4303690229476145E-4 1.6347074547972738E-4 18-19 0.0 0.0 0.0 1.6347074547972738E-4 2.2477227503462516E-4 20-21 0.0 0.0 0.0 2.145553534421422E-4 2.349891966271081E-4 22-23 0.0 1.0216921592482961E-5 0.0 4.0867686369931846E-4 2.860738045895229E-4 24-25 0.0 2.0433843184965922E-5 0.0 7.969198842136709E-4 3.473753341444207E-4 26-27 0.0 2.0433843184965922E-5 0.0 0.001614273611612308 3.882430205143525E-4 28-29 0.0 2.0433843184965922E-5 0.0 0.007080326663590692 4.188937852918014E-4 30-31 0.0 2.0433843184965922E-5 0.0 0.03203004919243409 4.2911070688428436E-4 32-33 0.0 2.0433843184965922E-5 0.0 0.08219513421152543 4.3932762847676736E-4 34-35 0.0 2.0433843184965922E-5 0.0 0.1486459922490346 4.699783932542162E-4 36-37 0.0 2.0433843184965922E-5 0.0 0.25672058885431936 4.699783932542162E-4 38-39 0.0 2.0433843184965922E-5 0.0 0.4411564574418218 4.8019531484669916E-4 40-41 0.0 2.0433843184965922E-5 0.0 0.6547718540974555 4.904122364391821E-4 42-43 0.0 2.0433843184965922E-5 0.0 0.8763462326736335 4.904122364391821E-4 44-45 0.0 2.0433843184965922E-5 0.0 1.1433859123363606 5.006291580316651E-4 46-47 0.0 2.0433843184965922E-5 0.0 1.460692846234104 5.10846079624148E-4 48-49 0.0 2.0433843184965922E-5 0.0 1.7978614757076343 5.31279922809114E-4 50-51 0.0 2.0433843184965922E-5 0.0 2.166518657529197 5.31279922809114E-4 52-53 0.0 2.0433843184965922E-5 0.0 2.5348284640166154 5.41496844401597E-4 54-55 0.0 2.0433843184965922E-5 0.0 2.9472958056267444 5.619306875865629E-4 56-57 0.0 2.0433843184965922E-5 0.0 3.426837237491525 5.721476091790458E-4 58-59 0.0 2.0433843184965922E-5 0.0 3.9389808661579186 5.721476091790458E-4 60-61 0.0 2.0433843184965922E-5 0.0 4.492870836451197 6.027983739564948E-4 62-63 0.0 2.0433843184965922E-5 0.0 5.045493908467009 6.538829819189095E-4 64-65 2.0433843184965922E-5 2.0433843184965922E-5 0.0 5.635439395060159 6.538829819189095E-4 66-67 2.0433843184965922E-5 2.0433843184965922E-5 0.0 6.312964333544074 6.640999035113925E-4 68-69 2.0433843184965922E-5 2.0433843184965922E-5 0.0 7.04435288266356 6.743168251038754E-4 70-71 2.0433843184965922E-5 2.0433843184965922E-5 0.0 7.811766297318139 6.743168251038754E-4 72-73 2.0433843184965922E-5 2.0433843184965922E-5 0.0 8.597468001623264 7.662691194362222E-4 74-75 2.0433843184965922E-5 2.0433843184965922E-5 0.0 9.403399210681506 8.07136805806154E-4 76-77 2.0433843184965922E-5 2.0433843184965922E-5 0.0 10.276108219268215 8.173537273986369E-4 78-79 2.0433843184965922E-5 2.0433843184965922E-5 0.0 11.22429984458019 8.173537273986369E-4 80-81 2.0433843184965922E-5 2.0433843184965922E-5 0.0 12.195101517376328 8.275706489911199E-4 82-83 2.0433843184965922E-5 2.0433843184965922E-5 0.0 13.187634582399678 8.582214137685687E-4 84-85 2.0433843184965922E-5 2.0433843184965922E-5 0.0 14.191886456489605 8.582214137685687E-4 86-87 2.0433843184965922E-5 2.0433843184965922E-5 0.0 15.245659749538298 8.786552569535347E-4 88-89 2.0433843184965922E-5 2.0433843184965922E-5 0.0 16.347033680286366 8.990891001385006E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 6970 0.0 41.965813 1 GGTATCA 3950 0.0 41.66125 1 TCAACGC 8580 0.0 33.69529 4 CAACGCA 8900 0.0 32.479782 5 ATCAACG 8945 0.0 32.373425 3 TATCAAC 9345 0.0 30.985504 2 AACGCAG 9480 0.0 30.593075 6 GTACATG 14015 0.0 25.451973 1 ACGCAGA 11305 0.0 25.150238 7 CGCAGAG 11505 0.0 24.66824 8 TACATGG 14635 0.0 23.969542 2 ACATGGG 14850 0.0 22.601233 3 CATGGGG 10190 0.0 19.89266 4 GCAGAGT 13505 0.0 19.89049 9 TACACCG 510 0.0 19.544968 5 GAGTACA 10505 0.0 19.377645 1 TAAGGTG 2280 0.0 18.944902 5 GTATAGG 1070 0.0 18.668901 1 AGAGTAC 11215 0.0 18.131931 10-11 AGTACAT 10920 0.0 16.996605 2 >>END_MODULE