##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920897_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4356038 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.226960830001943 31.0 30.0 34.0 26.0 34.0 2 30.239136343622345 31.0 30.0 34.0 26.0 34.0 3 30.377695511379837 31.0 30.0 34.0 27.0 34.0 4 34.021047796185435 35.0 35.0 37.0 30.0 37.0 5 33.54450535096342 35.0 35.0 37.0 28.0 37.0 6 33.48591105036274 35.0 35.0 37.0 28.0 37.0 7 33.29567005613817 35.0 33.0 37.0 27.0 37.0 8 33.22340048456878 35.0 33.0 37.0 27.0 37.0 9 34.553771569485846 38.0 34.0 39.0 27.0 39.0 10-11 34.364654761964886 37.5 34.0 39.0 27.0 39.0 12-13 34.182931714553455 37.0 34.0 39.0 26.0 39.0 14-15 35.07713901944841 38.0 34.0 40.0 26.0 41.0 16-17 34.949372112915455 38.0 34.0 40.0 25.0 41.0 18-19 34.86114251069435 38.0 34.0 40.0 25.0 41.0 20-21 34.74424649188092 38.0 34.0 40.0 25.0 41.0 22-23 34.59190610825709 38.0 33.5 40.0 24.0 41.0 24-25 34.41560243505681 38.0 33.0 40.0 24.0 41.0 26-27 34.232545147677776 38.0 33.0 40.0 23.0 41.0 28-29 34.17316458212715 38.0 33.0 40.0 22.5 41.0 30-31 34.16576129501166 38.0 33.0 40.0 22.5 41.0 32-33 34.01818923526379 38.0 33.0 40.0 22.0 41.0 34-35 33.84402959753794 38.0 33.0 40.0 20.5 41.0 36-37 33.64940262229118 38.0 32.5 40.0 19.0 41.0 38-39 33.457425187750886 38.0 32.0 40.0 18.0 41.0 40-41 33.230560086941395 38.0 32.0 40.0 16.5 41.0 42-43 33.258254863708714 38.0 32.0 40.0 16.0 41.0 44-45 33.1140169116982 38.0 32.0 40.0 15.0 41.0 46-47 32.86937017078363 37.5 31.5 40.0 13.5 41.0 48-49 32.6071859336397 37.0 31.0 40.0 10.0 41.0 50-51 32.34645542577911 37.0 31.0 40.0 8.5 41.0 52-53 32.0855402317427 37.0 31.0 40.0 8.0 41.0 54-55 31.80024657727963 36.0 30.0 40.0 7.0 41.0 56-57 31.47276378213413 36.0 30.0 39.0 4.0 41.0 58-59 31.138874936352714 35.5 29.0 39.0 2.0 40.0 60-61 30.803503091570825 35.0 29.0 39.0 2.0 40.0 62-63 30.484752887830638 35.0 28.5 39.0 2.0 40.0 64-65 30.08223803373616 35.0 28.0 38.0 2.0 40.0 66-67 29.64516402290338 34.0 28.0 38.0 2.0 40.0 68-69 29.19996003248824 34.0 27.5 37.0 2.0 39.5 70-71 28.76909958085765 34.0 26.5 36.5 2.0 39.0 72-73 28.33678723647498 34.0 26.0 36.0 2.0 39.0 74-75 27.900901690940252 33.0 26.0 35.5 2.0 38.5 76-77 26.457636503630134 31.5 24.5 34.0 2.0 36.0 78-79 27.299537331859824 33.0 26.0 35.0 2.0 37.0 80-81 27.326187007551354 33.0 26.0 35.0 2.0 36.5 82-83 26.995461357315982 33.0 25.0 35.0 2.0 36.0 84-85 26.679966634818154 33.0 25.0 35.0 2.0 36.0 86-87 26.14776501031442 32.0 24.0 35.0 2.0 35.0 88-89 25.779895285578316 32.0 22.5 35.0 2.0 35.0 90-91 25.419352631910005 32.0 20.0 34.5 2.0 35.0 92-93 25.11628445390054 32.0 19.5 34.0 2.0 35.0 94-95 24.731788037661744 32.0 17.5 34.0 2.0 35.0 96-97 24.207816254128176 32.0 6.0 34.0 2.0 35.0 98-99 23.608015701424094 31.0 2.0 34.0 2.0 35.0 100-101 21.418073832230114 28.0 2.0 33.0 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 103109.0 3 47093.0 4 25338.0 5 17957.0 6 15363.0 7 15495.0 8 17399.0 9 20061.0 10 22588.0 11 25245.0 12 28010.0 13 30352.0 14 33041.0 15 34704.0 16 36698.0 17 38529.0 18 37286.0 19 35758.0 20 36368.0 21 37910.0 22 41285.0 23 46690.0 24 54773.0 25 64209.0 26 75703.0 27 90213.0 28 106283.0 29 125062.0 30 146683.0 31 174409.0 32 208062.0 33 253483.0 34 319849.0 35 413032.0 36 548269.0 37 636551.0 38 367428.0 39 25749.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.47847615402591 19.237966610668174 13.333261265173416 24.9502959701325 2 16.284867120075628 20.514972550744506 37.810000739203836 25.39015958997603 3 19.305241010438305 24.066926017151662 29.324765767205392 27.303067205204645 4 13.682584734662258 16.289227585950382 35.94318289572441 34.085004783662946 5 14.450062320079326 37.01489001062736 34.14942906358714 14.385618605706174 6 33.86436082629879 35.243609044327464 16.81392236839656 14.07810776097719 7 29.479760680349738 31.467761594373144 20.655158921912147 18.397318803364968 8 26.856617896336786 34.46868748995875 19.84429993465571 18.830394679048755 9 26.71900255150657 15.449361939448444 19.28636896867778 38.54526654036721 10-11 25.807845012346707 25.235962965733616 27.585049456357552 21.37114256556212 12-13 26.38965241452854 22.509767510273125 27.411862583770763 23.688717491427575 14-15 23.378856298137652 24.21739831912378 24.815504897192962 27.588240485545608 16-17 23.63282499519036 27.176739151034145 25.66113151418915 23.529304339586343 18-19 23.668548107699785 26.397123894821874 26.910059337991292 23.02426865948705 20-21 24.467667460223687 25.575064741323487 26.58567585371682 23.371591944736007 22-23 24.012734851086126 25.50890983512678 26.519245241576293 23.959110072210795 24-25 23.808355095102126 25.69209085941396 26.612528117644707 23.887025927839208 26-27 23.69639357887027 25.85077510988127 26.57418190183982 23.87864940940864 28-29 23.705269361019415 26.068267030931423 26.45772886006657 23.768734747982588 30-31 23.92273951993372 25.816892010116234 26.20189934194906 24.05846912800099 32-33 23.73517374030614 25.7901080880862 26.25326401035757 24.22145416125009 34-35 24.090125595008622 25.846076944077513 26.262832680740146 23.800964780173718 36-37 24.18570362630387 25.58788272207981 26.20712902483977 24.019284626776546 38-39 23.978878665077254 25.686559353004114 26.3240160113938 24.010545970524834 40-41 24.09262177615887 25.626203088586585 26.451094470482584 23.83008066477196 42-43 23.981290150753306 25.53345685645144 26.290621426898653 24.1946315658966 44-45 23.845633654044867 25.585455463960137 26.399572894899997 24.169337987095 46-47 23.98433162844396 25.583559577071085 26.225186625966714 24.20692216851824 48-49 23.7933439601364 25.60123591112515 26.21298115345736 24.392438975281088 50-51 23.693467152078 25.75305188292819 26.332041739986558 24.221439225007256 52-53 23.924961321037795 25.52215738038679 26.342709265296012 24.210172033279402 54-55 23.55306551464774 25.464207881374378 26.471948926916046 24.51077767706184 56-57 23.534500966522952 25.630317598064202 26.30303823390315 24.532143201509705 58-59 23.471090355523863 25.442516578731933 26.34506628049153 24.741326785252678 60-61 23.356520503188644 25.538634140259397 26.523406703433807 24.581438653118155 62-63 23.22105327926344 25.612734603316145 26.47919447093016 24.68701764649025 64-65 23.113115930616388 25.53620223126983 26.277008700730946 25.07367313738284 66-67 23.092358802002945 25.562362771656282 26.17823892765849 25.167039498682275 68-69 23.375601049497273 25.320454420647682 26.195004846997332 25.108939682857713 70-71 23.149004311927385 25.14649967888437 26.26343559513392 25.441060414054324 72-73 23.0526455161035 25.087253336285322 26.330061460017916 25.530039687593266 74-75 22.932572550590088 25.270235604388837 26.1390631908968 25.658128654124273 76-77 22.98791773172543 24.95480583856442 26.4247796673162 25.63249676239395 78-79 22.891418588467154 25.0488620602271 26.34709833916094 25.712621012144808 80-81 22.861094021525187 24.990388184188223 26.228346435901962 25.920171358384632 82-83 22.726803627246294 24.94164035627766 26.333765388894204 25.997790627581846 84-85 22.58327143819804 24.868665602108607 26.309653230352076 26.238409729341278 86-87 22.549472832594788 24.826658794975238 26.31309652661616 26.310771845813818 88-89 22.51484449359981 24.70766358279105 26.219121830584687 26.558370093024454 90-91 22.263787488436723 24.72321215456617 26.24654943074958 26.766450926247526 92-93 22.33556389562286 24.542643348778405 26.302946097675544 26.81884665792319 94-95 22.068119910086832 24.408017896315194 26.462377414223965 27.061484779374013 96-97 22.121303255843852 24.20270623941082 26.50485782371334 27.171132681031988 98-99 21.984789271863526 24.195402391208376 26.382771031203163 27.43703730572494 100-101 22.069811238019717 23.952518054650312 26.544634823934878 27.433035883395096 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 68.0 1 58.0 2 88.0 3 126.0 4 113.0 5 117.0 6 196.5 7 413.0 8 655.0 9 704.5 10 595.5 11 530.5 12 532.0 13 555.5 14 627.0 15 698.0 16 774.5 17 884.0 18 1007.0 19 1199.5 20 1387.0 21 1615.5 22 1972.0 23 2400.5 24 3010.0 25 3770.0 26 4862.0 27 6559.5 28 8634.0 29 11605.0 30 16041.0 31 22580.5 32 31567.5 33 40122.5 34 48278.5 35 58332.5 36 71204.0 37 84006.0 38 95896.5 39 107227.5 40 117080.0 41 127027.5 42 137613.0 43 148652.0 44 159101.5 45 169544.5 46 179232.5 47 186411.0 48 192120.5 49 196184.5 50 195531.5 51 192830.5 52 190067.5 53 188312.5 54 184382.0 55 173160.0 56 158161.5 57 142180.5 58 128591.5 59 113423.0 60 94748.0 61 78594.0 62 64933.0 63 49912.0 64 36583.5 65 28015.5 66 21504.0 67 16750.0 68 13151.5 69 10098.5 70 7777.5 71 6091.5 72 4718.5 73 3784.0 74 2938.5 75 2131.0 76 1459.5 77 949.0 78 593.0 79 329.0 80 189.5 81 96.0 82 49.5 83 25.5 84 9.0 85 8.5 86 5.0 87 1.5 88 2.0 89 1.0 90 0.0 91 0.5 92 0.5 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.19058603253690626 2 0.0 3 0.01244249935377056 4 0.013521461474853985 5 0.006864035621360512 6 0.10415427964586169 7 0.13865811087965715 8 0.12022392825774247 9 0.13909428705626534 10-11 0.1119939725043721 12-13 0.11198249418393504 14-15 0.11418633170785011 16-17 0.06429007276796024 18-19 0.0768129203647902 20-21 0.03658140723290293 22-23 0.08201259952277734 24-25 0.05635855334595336 26-27 0.0646573790219461 28-29 0.03893446292249976 30-31 0.024242212763065887 32-33 0.03096850853918171 34-35 0.019490188102123995 36-37 0.024483257492244098 38-39 0.03188677417414632 40-41 0.02527526160240108 42-43 0.013268938425238713 44-45 0.026124657314743352 46-47 0.03226555874856923 48-49 0.008838306736534438 50-51 0.015931908766636103 52-53 0.0071395153118498965 54-55 0.012717979044259944 56-57 0.005004547710557162 58-59 0.003581235976362006 60-61 0.022302376609203135 62-63 0.010123878625484901 64-65 0.007162471952724012 66-67 0.04025446977276139 68-69 0.08858967713321142 70-71 0.02086758655457092 72-73 0.04376683582650105 74-75 0.08444600345543359 76-77 0.24381100440354284 78-79 0.07986615360104755 80-81 0.01656321639067428 82-83 0.011535712039243001 84-85 0.01269502240338583 86-87 0.2606841354460177 88-89 0.6177058143202607 90-91 0.2631978876217333 92-93 0.3507545159156095 94-95 0.0013200068502616368 96-97 0.004086282075592545 98-99 0.0037878457442290445 100-101 0.005394810605417124 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4356038.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.58421920472722 #Duplication Level Percentage of deduplicated Percentage of total 1 72.23814699778507 37.263484096770526 2 13.453177775118693 13.879433427037743 3 5.512314068414188 8.530452516911376 4 2.8415941657979644 5.863256653575847 5 1.6358684269843655 4.219249776382691 6 1.0316710484002296 3.193076730470892 7 0.6993006001137859 2.525101281238678 8 0.5020368718141921 2.0717744035615064 9 0.3510325534612947 1.6296966167168299 >10 1.6294683956926153 14.31542886799969 >50 0.0739865243102342 2.59129765323913 >100 0.028898617574131008 2.593950032897026 >500 0.0016096853294125127 0.5648642442928998 >1k 8.942692037666396E-4 0.7589336989051381 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 2.2956640874115422E-5 4 0.0 2.2956640874115422E-5 0.0 0.0 2.2956640874115422E-5 5 0.0 2.2956640874115422E-5 0.0 0.0 2.2956640874115422E-5 6 0.0 2.2956640874115422E-5 0.0 0.0 1.1478320437057712E-4 7 0.0 2.2956640874115422E-5 0.0 2.2956640874115422E-5 1.1478320437057712E-4 8 0.0 2.2956640874115422E-5 0.0 2.2956640874115422E-5 1.1478320437057712E-4 9 0.0 4.5913281748230844E-5 0.0 4.5913281748230844E-5 1.1478320437057712E-4 10-11 0.0 4.5913281748230844E-5 0.0 4.5913281748230844E-5 1.6069648611880796E-4 12-13 0.0 6.886992262234627E-5 0.0 5.739160218528856E-5 4.3617617660819306E-4 14-15 0.0 6.886992262234627E-5 1.1478320437057711E-5 9.182656349646169E-5 5.394810605417125E-4 16-17 0.0 6.886992262234627E-5 2.2956640874115422E-5 1.1478320437057712E-4 6.198293036011164E-4 18-19 0.0 6.886992262234627E-5 2.2956640874115422E-5 1.3773984524469255E-4 6.427859444752318E-4 20-21 0.0 6.886992262234627E-5 2.2956640874115422E-5 2.4104472917821194E-4 6.772209057864049E-4 22-23 0.0 6.886992262234627E-5 2.2956640874115422E-5 4.3617617660819306E-4 7.805257897199243E-4 24-25 0.0 9.182656349646169E-5 2.2956640874115422E-5 0.001033048839335194 8.034824305940398E-4 26-27 0.0 1.3773984524469255E-4 2.2956640874115422E-5 0.0018135746290551184 8.608740327793284E-4 28-29 0.0 1.3773984524469255E-4 2.2956640874115422E-5 0.00677220905786405 8.723523532163861E-4 30-31 0.0 1.3773984524469255E-4 2.2956640874115422E-5 0.029292673755371278 8.953089940905016E-4 32-33 0.0 1.6069648611880796E-4 2.2956640874115422E-5 0.07695066021003491 9.871355575869632E-4 34-35 0.0 1.6069648611880796E-4 2.2956640874115422E-5 0.14262960975087913 0.0011019187619575404 36-37 0.0 1.6069648611880796E-4 2.2956640874115422E-5 0.2545317556917548 0.0011019187619575404 38-39 0.0 1.8365312699292338E-4 2.2956640874115422E-5 0.4437748247375253 0.001147832043705771 40-41 0.0 1.8365312699292338E-4 2.2956640874115422E-5 0.6622531759364818 0.001147832043705771 42-43 0.0 1.8365312699292338E-4 2.2956640874115422E-5 0.8846111994431637 0.001147832043705771 44-45 0.0 1.8365312699292338E-4 2.2956640874115422E-5 1.1512181482347033 0.0011937453254540018 46-47 0.0 1.8365312699292338E-4 2.2956640874115422E-5 1.472381554063578 0.001274093568513406 48-49 0.0 2.4104472917821194E-4 2.2956640874115422E-5 1.8158932497834042 0.0014118334137580985 50-51 0.0 2.525230496152697E-4 2.2956640874115422E-5 2.1857476909062776 0.0014921816568175025 52-53 0.0 2.525230496152697E-4 2.2956640874115422E-5 2.559745805706929 0.0015840082203139642 54-55 0.0 2.525230496152697E-4 2.2956640874115422E-5 2.9770860584779104 0.0016184431816251375 56-57 0.0 2.6400137005232736E-4 2.2956640874115422E-5 3.4603807404802254 0.0016873131042474837 58-59 0.0 3.213929722376159E-4 2.2956640874115422E-5 3.9869027772485 0.0017561830268698298 60-61 0.0 3.213929722376159E-4 2.2956640874115422E-5 4.541018696347461 0.0017676613473068877 62-63 0.0 3.213929722376159E-4 2.2956640874115422E-5 5.094296698054516 0.0018365312699292339 64-65 0.0 3.213929722376159E-4 2.2956640874115422E-5 5.687128991987674 0.00190540119255158 66-67 1.1478320437057711E-5 3.213929722376159E-4 2.2956640874115422E-5 6.359448654947455 0.0019742711151739265 68-69 2.2956640874115422E-5 3.213929722376159E-4 2.2956640874115422E-5 7.100936676860945 0.0019972277560480417 70-71 2.2956640874115422E-5 3.213929722376159E-4 2.2956640874115422E-5 7.873416163954493 0.0020431410377962727 72-73 2.2956640874115422E-5 3.213929722376159E-4 2.2956640874115422E-5 8.658085627352195 0.002134967601292734 74-75 2.2956640874115422E-5 3.4434961311173134E-4 2.2956640874115422E-5 9.462888064796497 0.0022497508056633113 76-77 2.2956640874115422E-5 3.4434961311173134E-4 2.2956640874115422E-5 10.326918635696014 0.002318620728285658 78-79 2.2956640874115422E-5 3.4434961311173134E-4 2.2956640874115422E-5 11.285702741803446 0.002341577369159773 80-81 2.2956640874115422E-5 3.4434961311173134E-4 2.2956640874115422E-5 12.275673444538363 0.0023989689713450617 82-83 2.2956640874115422E-5 3.4434961311173134E-4 2.2956640874115422E-5 13.271922788552349 0.0026170570596491583 84-85 2.2956640874115422E-5 3.4434961311173134E-4 2.2956640874115422E-5 14.28087863329016 0.0026400137005232736 86-87 2.2956640874115422E-5 3.6730625398584676E-4 2.2956640874115422E-5 15.316567486325877 0.0027088836231456198 88-89 2.2956640874115422E-5 3.6730625398584676E-4 2.2956640874115422E-5 16.416615282052177 0.002789231866205024 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 8205 0.0 34.02386 1 GGTATCA 5210 0.0 33.68315 1 TCAACGC 10185 0.0 26.615793 4 ATCAACG 10305 0.0 26.25979 3 CAACGCA 10305 0.0 26.072512 5 GTACATG 14310 0.0 25.922628 1 TATCAAC 10600 0.0 25.752321 2 AACGCAG 10780 0.0 25.01232 6 TACATGG 14690 0.0 24.884178 2 ACATGGG 14925 0.0 23.793133 3 ACGCAGA 12485 0.0 21.32965 7 CATGGGG 10220 0.0 20.299946 4 CGCAGAG 13095 0.0 20.079773 8 GAGTACA 10695 0.0 19.565725 1 AGTACAT 10750 0.0 18.238787 2 AGAGTAC 11095 0.0 18.114994 10-11 GCAGAGT 14605 0.0 16.93112 9 TAAGGTG 1935 0.0 16.19114 5 TAAGGCG 1210 0.0 15.692389 5 GAGTACT 4835 0.0 15.261284 12-13 >>END_MODULE