##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920894_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2869713 Sequences flagged as poor quality 0 Sequence length 98 %GC 47 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.66932686299989 31.0 30.0 33.0 22.0 34.0 2 28.699968951598994 31.0 28.0 34.0 20.0 34.0 3 28.766502782682448 31.0 28.0 34.0 22.0 34.0 4 32.2654742826199 35.0 32.0 37.0 23.0 37.0 5 32.23339720731655 35.0 32.0 37.0 23.0 37.0 6 32.354081749638375 35.0 33.0 37.0 25.0 37.0 7 32.19872196278861 35.0 32.0 37.0 23.0 37.0 8 32.14817196005315 35.0 32.0 37.0 23.0 37.0 9 33.42430654215247 37.0 33.0 39.0 23.0 39.0 10-11 33.23238874410089 37.0 33.0 39.0 21.5 39.0 12-13 33.062060212989934 37.0 32.0 39.0 19.0 39.0 14-15 33.81924011216452 38.0 32.5 40.0 18.0 41.0 16-17 33.72014518525023 38.0 32.0 40.0 18.0 41.0 18-19 33.618770413626734 38.0 32.0 40.0 17.5 41.0 20-21 33.53642994961517 38.0 32.0 40.0 18.0 41.0 22-23 33.31634696570703 38.0 32.0 40.0 17.0 41.0 24-25 33.12294103974857 38.0 32.0 40.0 16.0 41.0 26-27 33.14999775238848 38.0 32.0 40.0 15.5 41.0 28-29 32.98857603530388 38.0 32.0 40.0 11.5 41.0 30-31 32.73691428376287 38.0 31.5 40.0 9.5 41.0 32-33 32.47925803033265 37.0 31.0 40.0 9.0 41.0 34-35 32.142032670165975 37.0 30.5 40.0 8.5 41.0 36-37 31.820438141375114 37.0 30.0 40.0 7.0 41.0 38-39 31.6172300156845 37.0 30.0 40.0 2.0 41.0 40-41 31.41613778102549 37.0 30.0 40.0 2.0 41.0 42-43 31.17115439766973 36.5 30.0 40.0 2.0 41.0 44-45 30.884107226053615 36.0 29.0 39.0 2.0 41.0 46-47 30.6232449028875 36.0 28.5 39.0 2.0 40.0 48-49 30.31800880436476 35.5 28.0 39.0 2.0 40.0 50-51 29.180780273149267 34.0 26.0 38.0 2.0 39.5 52-53 29.631045682965507 34.5 27.5 38.5 2.0 39.5 54-55 30.28223501792688 36.0 28.0 39.0 2.0 40.0 56-57 30.242921853160926 35.5 28.0 39.0 2.0 41.0 58-59 30.006384436353045 35.0 28.0 39.0 2.0 40.5 60-61 29.68889467343947 35.0 28.0 39.0 2.0 40.0 62-63 29.307979752679103 35.0 27.0 39.0 2.0 40.0 64-65 28.900791298642062 34.0 26.0 38.0 2.0 40.0 66-67 28.51860917799097 34.0 26.0 38.0 2.0 40.0 68-69 28.075463295458466 34.0 26.0 37.0 2.0 40.0 70-71 27.749464319254226 34.0 25.0 37.0 2.0 39.0 72-73 27.289129609825096 33.5 24.5 36.0 2.0 39.0 74-75 26.841585726516904 33.0 23.0 36.0 2.0 39.0 76-77 26.42095202551614 33.0 22.0 35.0 2.0 37.5 78-79 25.942992731328882 32.0 20.5 35.0 2.0 37.0 80-81 25.475212155361877 32.0 19.0 35.0 2.0 36.5 82-83 24.98414249090414 32.0 17.5 35.0 2.0 36.0 84-85 24.56617299360598 31.5 10.5 35.0 2.0 35.5 86-87 24.08660778969883 31.0 4.5 34.0 2.0 35.0 88-89 23.525709191128172 31.0 2.0 34.0 2.0 35.0 90-91 23.008004807449385 31.0 2.0 34.0 2.0 35.0 92-93 22.45244803225967 30.0 2.0 34.0 2.0 35.0 94-95 21.784841376123673 30.0 2.0 34.0 2.0 35.0 96-97 21.12378067075 29.0 2.0 34.0 2.0 35.0 98 20.72052362030628 29.0 2.0 34.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 140633.0 3 23783.0 4 17548.0 5 14307.0 6 13342.0 7 13692.0 8 15780.0 9 18213.0 10 19833.0 11 21387.0 12 22722.0 13 22909.0 14 21968.0 15 23087.0 16 25286.0 17 26924.0 18 27276.0 19 26706.0 20 27735.0 21 29539.0 22 32050.0 23 35660.0 24 40495.0 25 46970.0 26 53928.0 27 62326.0 28 71809.0 29 83220.0 30 97575.0 31 114959.0 32 135522.0 33 163832.0 34 203969.0 35 255828.0 36 322462.0 37 355639.0 38 218067.0 39 22731.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.316791505807714 18.585873144029343 13.519673184048761 24.577662166114184 2 15.939941191807005 20.078647941364693 39.250843851560205 24.7305670152681 3 18.945266210319396 23.969628741513198 29.62354835561628 27.46155669255113 4 13.288324789238098 16.14344321287257 36.88661743399717 33.68161456389216 5 14.410967555743307 36.62038644231319 34.42488159819089 14.54376440375261 6 32.9296074695733 35.378243348090955 17.496007355806466 14.196141826529281 7 28.516954956279957 31.859258022660047 21.45730687047164 18.166480150588356 8 26.23172718167327 34.21708731990301 20.558327693413247 18.99285780501048 9 26.568092349304617 15.835276907481688 20.040366405978578 37.55626433723512 10-11 25.286679414749734 25.415263724153554 28.102222783641217 21.195834077455494 12-13 25.983849153758527 23.003630159351346 27.71637293518787 23.29614775170226 14-15 23.196786465631426 24.69615240800763 25.419908538189645 26.687152588171298 16-17 23.177216784540068 27.450158710466354 26.201523697144502 23.17110080784908 18-19 23.096400471098995 26.66915683772445 27.738106048867195 22.496336642309352 20-21 23.900676868695005 26.030638866540496 27.40751512919582 22.661169135568684 22-23 23.566830547818824 25.838122162673116 27.19538249302822 23.39966479647984 24-25 23.313573009636425 26.03803592076065 27.335689787675026 23.3127012819279 26-27 23.2002213727973 26.211892266633562 27.22986538037029 23.35802098019885 28-29 23.229492672368103 26.419536911516122 27.082391926494953 23.268578489620815 30-31 23.536860477055367 26.180954428000568 26.909013763311073 23.37317133163299 32-33 23.19075513594845 26.201919809392294 26.845632086838595 23.76169296782066 34-35 23.741469933745567 26.19660447766413 26.79813237180249 23.263793216787814 36-37 23.760088272383353 25.942868151884547 26.78415300546448 23.51289057026762 38-39 23.51211952832068 26.03239810468357 26.822603465643454 23.632878901352303 40-41 23.720037565313852 25.934230586877494 26.956474238976746 23.389257608831908 42-43 23.605578229554506 25.860882344140144 26.752690008509823 23.780849417795523 44-45 23.52313942999739 25.91596565736723 26.86228447506702 23.69861043756836 46-47 23.559782047733826 25.867328748167022 26.660262548997448 23.9126266551017 48-49 23.380339982321996 25.936233591739583 26.697300842145367 23.986125583793054 50-51 23.256829316417647 26.131729785629222 26.784854667556672 23.826586230396458 52-53 23.43078321165226 25.866680108994878 26.849177777591077 23.853358901761784 54-55 23.109672520775614 25.829234861968782 26.98819545730854 24.07289715994706 56-57 23.020338129517803 25.93276429568424 26.940388229001112 24.106509345796844 58-59 23.09179129362556 25.632022349050658 26.977419662979727 24.29876669434405 60-61 22.955625495510898 25.625605745940423 27.217574755545044 24.201194003003643 62-63 22.941237391867816 25.6363021837068 27.190039733023198 24.232420691402186 64-65 22.815198533663978 25.55043610614413 27.036323042003136 24.598042318188757 66-67 22.810942726017817 25.588027531006517 26.98248719167452 24.61854255130114 68-69 23.04603250726407 25.394207046465716 26.93060104862932 24.62915939764089 70-71 22.81566616456619 25.209763799412343 27.062673717409595 24.911896318611873 72-73 22.914695813321703 25.252073964311833 27.027179677825153 24.806050544541314 74-75 22.91728222258199 25.323553672338118 26.96855218801062 24.790611917069278 76-77 22.89591192258155 25.162429192096265 27.118520205941493 24.823138679380694 78-79 22.973480209590456 25.18688645307266 27.032927226041913 24.80670611129497 80-81 23.053282414984544 25.090750765873516 27.030648929175932 24.82531788996601 82-83 23.058955508203045 25.047440420374667 27.073447544699253 24.820156526723036 84-85 23.04809177349813 24.986016427790478 27.082179692268742 24.883712106442655 86-87 23.09439191115784 24.88504962433198 27.0692335085699 24.95132495594028 88-89 23.144821661343606 24.798913945540217 26.975255427255284 25.08100896586089 90-91 23.188104729385323 24.697168642875916 27.006683421997398 25.108043205741364 92-93 23.350433800281394 24.43861937144113 27.100816056126785 25.11013077215069 94-95 23.242984738483923 24.33402226978332 27.223586106564827 25.199406885167935 96-97 23.508307671755386 24.111718308351946 27.14286488648085 25.237109133411824 98 23.61478047738227 23.95709665247722 27.03692811360323 25.39119475653728 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 97.0 1 79.5 2 113.5 3 176.0 4 198.5 5 235.0 6 329.0 7 632.0 8 953.5 9 1075.5 10 1094.0 11 1098.0 12 1231.5 13 1403.5 14 1525.0 15 1680.5 16 1805.0 17 1883.5 18 1952.5 19 2023.0 20 2143.0 21 2247.0 22 2532.0 23 3002.0 24 3597.0 25 4496.5 26 5789.5 27 7719.0 28 10484.5 29 14362.5 30 19760.5 31 26984.0 32 33686.0 33 39507.5 34 46542.0 35 54460.0 36 62534.5 37 70629.0 38 77331.0 39 83024.0 40 89299.0 41 94674.0 42 100241.5 43 106313.5 44 111778.5 45 116914.0 46 120807.0 47 123790.0 48 125439.5 49 124039.0 50 122464.0 51 121592.5 52 119238.5 53 116209.5 54 111330.0 55 105092.0 56 96725.0 57 86329.5 58 77487.5 59 67168.0 60 55298.5 61 45391.5 62 37271.5 63 29189.0 64 21744.5 65 16845.0 66 13222.0 67 10270.0 68 8205.0 69 6526.0 70 4939.0 71 3798.5 72 3188.0 73 2617.5 74 2025.0 75 1539.0 76 1080.0 77 689.5 78 424.5 79 239.0 80 134.5 81 75.0 82 42.0 83 28.0 84 21.0 85 13.5 86 9.0 87 8.5 88 6.5 89 7.5 90 8.0 91 4.5 92 3.5 93 3.5 94 3.5 95 2.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.38683310839794777 2 0.025263850426854535 3 0.01927021970489732 4 0.0167264113170899 5 0.023312435773194046 6 0.023939676197584914 7 0.015123463565868783 8 0.010001000100010001 9 0.0 10-11 1.7423345121968644E-5 12-13 0.004948230014639095 14-15 0.003484669024393729 16-17 0.006254980898786743 18-19 0.03838362930369692 20-21 0.07819597290739527 22-23 0.09750103930253654 24-25 0.06429214350006429 26-27 0.07499007740495303 28-29 0.058019739256155584 30-31 0.05127690469395372 32-33 0.020002000200020003 34-35 0.3425081184076596 36-37 0.5196686916078368 38-39 0.47461192112242584 40-41 0.48391598741755704 42-43 0.43302239631628664 44-45 0.4073926556418708 46-47 0.406173021483333 48-49 0.39580613113576163 50-51 0.3938024464467353 52-53 0.4552720080370406 54-55 0.45504550455045506 56-57 0.425077350940669 58-59 0.410633397834557 60-61 0.424519803896766 62-63 0.4055109343686982 64-65 0.4554113947980164 66-67 0.47602321207730525 68-69 0.41755046584797856 70-71 0.37367848283086147 72-73 0.36010569698084793 74-75 0.3426126584783914 76-77 0.340608973789365 78-79 0.3399120399844862 80-81 0.3565861812662103 82-83 0.3510281341723022 84-85 0.3522129216405961 86-87 0.33712430476497124 88-89 0.3806826675698929 90-91 0.3597746534235305 92-93 0.35001758015522805 94-95 0.3565861812662103 96-97 0.35604605756742924 98 0.3511152508979121 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 2869713.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.33685848111394 #Duplication Level Percentage of deduplicated Percentage of total 1 78.7315858833895 49.86611313089909 2 11.883292962455878 15.053008893053702 3 4.223009888929204 8.02416539098361 4 1.8937754487730707 4.797831503757921 5 0.9959730792091541 3.1540902984434736 6 0.5871501569863121 2.2312947840123534 7 0.39202795234320637 1.7380873256741778 8 0.25704899958256106 1.3024540887418068 9 0.17772349484896763 1.013080305781624 >10 0.803058420561457 8.600747260696902 >50 0.037237096340009615 1.6055848821757055 >100 0.016734756292255945 1.827763429344104 >500 9.949394076792944E-4 0.41790333793789425 >1k 3.869208806232885E-4 0.3678753684977715 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 8.711672560984322E-5 0.0 0.0 0.0 12-13 0.0 1.0454007073181186E-4 0.0 0.0 0.0 14-15 0.0 1.219634158537805E-4 0.0 1.7423345121968644E-5 1.7423345121968644E-5 16-17 0.0 1.3938676097574915E-4 0.0 3.484669024393729E-5 3.484669024393729E-5 18-19 0.0 1.3938676097574915E-4 0.0 1.0454007073181187E-4 3.484669024393729E-5 20-21 0.0 1.3938676097574915E-4 0.0 2.43926831707561E-4 3.484669024393729E-5 22-23 0.0 2.0908014146362372E-4 0.0 5.052770085370907E-4 3.484669024393729E-5 24-25 0.0 2.0908014146362372E-4 0.0 0.0013415975743915854 5.2270035365905936E-5 26-27 0.0 2.0908014146362372E-4 0.0 0.0024566916621975785 6.969338048787458E-5 28-29 0.0 2.43926831707561E-4 0.0 0.008746519251228258 6.969338048787458E-5 30-31 0.0 2.43926831707561E-4 0.0 0.03625798119881675 6.969338048787458E-5 32-33 0.0 2.43926831707561E-4 0.0 0.09682152884277975 6.969338048787458E-5 34-35 0.0 2.43926831707561E-4 0.0 0.18083689902091254 6.969338048787458E-5 36-37 0.0 2.43926831707561E-4 0.0 0.31717457460031717 6.969338048787458E-5 38-39 0.0 2.43926831707561E-4 0.0 0.5348966952444374 6.969338048787458E-5 40-41 0.0 2.43926831707561E-4 0.0 0.7802173945617559 6.969338048787458E-5 42-43 0.0 2.7877352195149825E-4 0.0 1.039633580082747 6.969338048787458E-5 44-45 3.484669024393729E-5 3.1362021219543556E-4 0.0 1.3635161425550222 6.969338048787458E-5 46-47 3.484669024393729E-5 3.4846690243937287E-4 0.0 1.7415853083566195 6.969338048787458E-5 48-49 3.484669024393729E-5 4.1816028292724743E-4 0.0 2.142618443028972 6.969338048787458E-5 50-51 3.484669024393729E-5 4.704303182931533E-4 0.0 2.5656572625903706 6.969338048787458E-5 52-53 3.484669024393729E-5 5.227003536590593E-4 0.0 2.9932609985737253 6.969338048787458E-5 54-55 3.484669024393729E-5 5.227003536590593E-4 0.0 3.4807487717412857 6.969338048787458E-5 56-57 3.484669024393729E-5 5.227003536590593E-4 0.0 4.048087735602828 6.969338048787458E-5 58-59 3.484669024393729E-5 5.227003536590593E-4 0.0 4.639819382635127 6.969338048787458E-5 60-61 3.484669024393729E-5 5.227003536590593E-4 0.0 5.261153293029651 6.969338048787458E-5 62-63 3.484669024393729E-5 5.575470439029965E-4 0.0 5.886721076288813 6.969338048787458E-5 64-65 3.484669024393729E-5 6.272404243908711E-4 0.0 6.577591557065114 6.969338048787458E-5 66-67 3.484669024393729E-5 6.620871146348084E-4 0.0 7.359760366280531 6.969338048787458E-5 68-69 3.484669024393729E-5 6.969338048787457E-4 0.0 8.20531530504967 6.969338048787458E-5 70-71 3.484669024393729E-5 6.969338048787457E-4 0.0 9.082650425321278 6.969338048787458E-5 72-73 3.484669024393729E-5 6.969338048787457E-4 0.0 9.977809627652661 6.969338048787458E-5 74-75 3.484669024393729E-5 6.969338048787457E-4 0.0 10.912798596932864 6.969338048787458E-5 76-77 5.2270035365905936E-5 6.969338048787457E-4 0.0 11.926558509509487 6.969338048787458E-5 78-79 1.0454007073181186E-4 6.969338048787457E-4 0.0 13.015325922836187 6.969338048787458E-5 80-81 1.0454007073181186E-4 6.969338048787457E-4 0.0 14.122753738788512 6.969338048787458E-5 82-83 1.0454007073181186E-4 6.969338048787457E-4 0.0 15.24779655665915 6.969338048787458E-5 84-85 1.0454007073181186E-4 6.969338048787457E-4 0.0 16.3819692073737 6.969338048787458E-5 86 1.0454007073181186E-4 6.969338048787457E-4 0.0 17.269845451444098 6.969338048787458E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2580 0.0 51.378704 1 GTATCAA 5065 0.0 43.255157 1 ATCAACG 6515 0.0 33.509727 3 TCAACGC 6515 0.0 33.509727 4 CAACGCA 6605 0.0 32.91424 5 TATCAAC 6850 0.0 31.938444 2 AACGCAG 7060 0.0 31.241756 6 ACGCAGA 7900 0.0 27.45118 7 CGCAGAG 8150 0.0 26.270668 8 GTACATG 7900 0.0 25.40211 1 TACATGG 8225 0.0 24.089832 2 ACATGGG 8455 0.0 23.162886 3 GCAGAGT 9245 0.0 22.365257 9 CATGGGG 5895 0.0 20.462105 4 GTGTAGC 1545 0.0 19.661915 1 AGAGTAC 8000 0.0 19.599806 10-11 TAAGGCG 855 0.0 19.311445 5 GAGTACT 4460 0.0 18.560532 12-13 CAGAGTA 8515 0.0 18.495144 10-11 CGCCGTA 325 7.4760464E-10 18.40555 92 >>END_MODULE