##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920894_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2869713 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.87839202038671 31.0 30.0 34.0 26.0 34.0 2 29.898304813059703 31.0 30.0 34.0 26.0 34.0 3 30.032980998448277 31.0 30.0 34.0 26.0 34.0 4 33.66287952837096 35.0 35.0 37.0 28.0 37.0 5 33.131483531628426 35.0 33.0 37.0 27.0 37.0 6 33.06144482044023 35.0 33.0 37.0 26.0 37.0 7 32.86571165827384 35.0 33.0 37.0 26.0 37.0 8 32.7895232031914 35.0 33.0 37.0 26.0 37.0 9 34.07363105648544 37.0 34.0 39.0 26.0 39.0 10-11 33.86531858760789 37.0 33.0 39.0 25.0 39.0 12-13 33.67442667611709 37.0 33.0 39.0 24.5 39.0 14-15 34.510757695978654 38.0 33.0 40.0 24.0 41.0 16-17 34.382515951943624 38.0 33.0 40.0 23.5 41.0 18-19 34.29922661255672 38.0 33.0 40.0 22.5 41.0 20-21 34.181281717021875 38.0 33.0 40.0 21.5 41.0 22-23 34.02196317192695 38.0 33.0 40.0 19.0 41.0 24-25 33.82954183920134 38.0 32.5 40.0 18.5 41.0 26-27 33.6293308773386 38.0 32.0 40.0 18.0 41.0 28-29 33.5552482077476 38.0 32.0 40.0 18.0 41.0 30-31 33.508568801130984 38.0 32.0 40.0 17.0 41.0 32-33 33.33676590655581 38.0 32.0 40.0 16.0 41.0 34-35 33.14843139366201 38.0 32.0 40.0 16.0 41.0 36-37 32.92896484770428 38.0 31.5 40.0 15.0 41.0 38-39 32.726004656214755 37.5 31.0 40.0 11.0 41.0 40-41 32.47163357450728 37.0 31.0 40.0 9.0 41.0 42-43 32.47396934815433 37.0 31.0 40.0 9.0 41.0 44-45 32.3013587072993 37.0 31.0 40.0 8.0 41.0 46-47 32.03275170722647 37.0 30.0 40.0 6.5 41.0 48-49 31.75510913460684 37.0 30.0 40.0 2.0 41.0 50-51 31.48993226848817 36.5 30.0 40.0 2.0 41.0 52-53 31.226243704509823 36.0 30.0 39.5 2.0 41.0 54-55 30.939510501572805 36.0 29.0 39.0 2.0 41.0 56-57 30.615345680909556 35.5 28.5 39.0 2.0 40.0 58-59 30.28333164326886 35.0 28.0 39.0 2.0 40.0 60-61 29.959181283982055 35.0 28.0 39.0 2.0 40.0 62-63 29.644260070606364 34.5 28.0 38.0 2.0 40.0 64-65 29.251144103957433 34.0 27.0 38.0 2.0 40.0 66-67 28.83173979418848 34.0 26.0 37.5 2.0 40.0 68-69 28.39582494834849 34.0 26.0 37.0 2.0 39.5 70-71 27.972847110495024 33.5 26.0 36.5 2.0 39.0 72-73 27.532973332176425 33.0 25.0 36.0 2.0 39.0 74-75 27.088630640067493 33.0 24.0 35.5 2.0 38.5 76-77 25.672679463068256 30.5 22.0 34.0 2.0 36.0 78-79 26.504234918265347 32.5 24.0 35.0 2.0 37.0 80-81 26.522111096127034 33.0 24.0 35.0 2.0 36.5 82-83 26.168816707454717 33.0 23.0 35.0 2.0 36.0 84-85 25.833985140674343 32.0 22.0 35.0 2.0 36.0 86-87 25.27711359986173 32.0 20.0 35.0 2.0 35.0 88-89 24.88752220169752 32.0 18.0 34.5 2.0 35.0 90-91 24.496898296101385 31.5 15.0 34.0 2.0 35.0 92-93 24.164096200560824 31.0 8.5 34.0 2.0 35.0 94-95 23.748936391897033 31.0 2.0 34.0 2.0 35.0 96-97 23.184945846501027 31.0 2.0 34.0 2.0 35.0 98-99 22.55410035777097 31.0 2.0 34.0 2.0 35.0 100-101 20.422145524656997 28.0 2.0 33.0 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 86821.0 3 36766.0 4 19256.0 5 13491.0 6 11790.0 7 11836.0 8 13299.0 9 15179.0 10 17011.0 11 18921.0 12 20630.0 13 22864.0 14 24814.0 15 26445.0 16 28068.0 17 28666.0 18 27232.0 19 25544.0 20 25708.0 21 26808.0 22 28652.0 23 32664.0 24 37640.0 25 44444.0 26 52516.0 27 61584.0 28 72664.0 29 84143.0 30 99804.0 31 116867.0 32 138916.0 33 168586.0 34 209918.0 35 266993.0 36 343663.0 37 384949.0 38 210984.0 39 13577.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 41.18182443422611 20.156049310995755 14.318042725908942 24.34408352886919 2 16.052755101294103 21.370813039492102 37.975470020869686 24.600961838344112 3 18.715366696545697 25.00421698587972 30.01497204242915 26.265444275145434 4 13.821688749049866 17.280578643593227 36.43263882765704 32.46509377969986 5 14.329036673780527 37.029833602600576 34.36307725762811 14.27805246599078 6 32.758862472345655 36.09241906372552 17.198404542184957 13.950313921743868 7 28.355256844445144 32.12700805577802 21.461206813823765 18.056528285953075 8 26.11206806018766 34.6854285284643 20.391540066199866 18.810963345148174 9 26.410949515422317 15.820697183265702 20.028280408767767 37.74007289254422 10-11 25.275225765105212 25.692069845324454 28.09698650180129 20.935717887769044 12-13 25.953979833514683 23.170718093076463 27.801882405311957 23.073419668096896 14-15 23.080176990347727 24.88299665325947 25.427221388996752 26.609604967396056 16-17 23.023345664448833 27.691850898228022 26.278125526315698 23.006677911007447 18-19 23.052366259539188 26.829732715245875 27.813447325539524 22.30445369967541 20-21 23.85091509178108 26.104709004927013 27.455786192505666 22.588589710786238 22-23 23.48203503797539 25.99143624659634 27.265327261456047 23.261201453972223 24-25 23.25123872370055 26.18390466351449 27.374320667570178 23.190535945214783 26-27 23.12680645349135 26.365948205672346 27.24980063413513 23.25744470670117 28-29 23.247832946121317 26.490478663075343 27.16345889879099 23.098229492012347 30-31 23.4959322105972 26.234252804894243 26.96722519983423 23.30258978467433 32-33 23.200143194837874 26.245978963116695 26.880822192132403 23.67305564991302 34-35 23.681242482553248 26.279320874165567 26.85915977469356 23.180276868587622 36-37 23.69057853705481 26.04803124727147 26.84085477571958 23.420535439954143 38-39 23.498778749580396 26.10777887890362 26.873173658079864 23.520268713436124 40-41 23.697291531963618 25.96011105050079 26.984748855423472 23.35784856211212 42-43 23.56531988444701 25.997575046186693 26.750642048169382 23.686463021196914 44-45 23.43438448677996 25.99526065111759 26.89072466864729 23.679630193455154 46-47 23.48476252772751 25.967136049587864 26.706425915110206 23.841675507574422 48-49 23.344722243712923 26.024130689489095 26.690528315800403 23.940618750997576 50-51 23.215706871425155 26.158741267149637 26.712279950293915 23.913271911131297 52-53 23.472279868312516 25.9014483601967 26.7235890589405 23.902682712550284 54-55 23.127715996309956 25.87020791867685 26.827918446836087 24.174157638177103 56-57 23.055628059466603 26.004128831531613 26.688254052775022 24.25198905622675 58-59 23.0002695492464 25.74406133526019 26.737229211471753 24.518439904021648 60-61 22.86739054588598 25.764783751161957 26.93015772657358 24.43766797637848 62-63 22.872062362906785 25.77258365692037 26.852043529688107 24.503310450484737 64-65 22.666105128749763 25.61362160417815 26.761417187416413 24.958856079655675 66-67 22.58071094692466 25.769564426961384 26.678733138938092 24.97099148717586 68-69 22.847994346967102 25.59594800869928 26.605196444462738 24.95086119987088 70-71 22.596132732635184 25.443029989132505 26.65166431634105 25.309172961891264 72-73 22.56600987256722 25.54142850842797 26.60107615479909 25.29148546420571 74-75 22.506226303687374 25.685992011219028 26.39816745609327 25.409614229000326 76-77 22.528951054813998 25.445418309992 26.64999179065112 25.37563884454288 78-79 22.477800986847555 25.53988115073044 26.540451874136746 25.44186598828526 80-81 22.401440655976643 25.557981471454983 26.50992062904276 25.53065724352561 82-83 22.3403298774051 25.55385870552027 26.47982884041753 25.625982576657098 84-85 22.269391305650956 25.47484244234706 26.406744532248023 25.849021719753956 86-87 22.21282753912371 25.45645057769731 26.403958717588488 25.92676316559049 88-89 22.14098156534094 25.382488450176876 26.36052629779583 26.116003686686362 90-91 21.93412040283591 25.406523878855726 26.328516087825022 26.330839630483343 92-93 22.023579406914635 25.193512384635252 26.400651286390286 26.382256922059828 94-95 21.81459572948156 25.101692700392903 26.48996837620985 26.593743193915685 96-97 21.880396059201882 24.972635282416782 26.461028495200157 26.685940163181186 98-99 21.733257039547897 25.020115980957687 26.30149264237741 26.94513433711701 100-101 21.7403440737758 24.984483678502514 26.40076401983719 26.874408227884494 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 84.0 1 67.0 2 85.0 3 142.0 4 143.5 5 151.0 6 226.5 7 434.5 8 652.0 9 681.5 10 607.0 11 532.0 12 516.5 13 574.5 14 669.0 15 743.0 16 807.5 17 894.5 18 1057.0 19 1248.0 20 1467.5 21 1670.0 22 1958.0 23 2437.0 24 2957.0 25 3738.5 26 4922.0 27 6551.0 28 8649.0 29 11702.5 30 16193.5 31 22242.5 32 29240.0 33 35158.0 34 40858.0 35 47714.0 36 56073.0 37 64119.5 38 70966.0 39 77489.0 40 83528.5 41 89366.0 42 94818.5 43 100341.5 44 105983.0 45 111892.0 46 117224.5 47 120809.5 48 123473.5 49 124598.5 50 123231.0 51 120894.0 52 117522.0 53 114144.5 54 110837.5 55 104317.5 56 95190.5 57 85179.5 58 76526.0 59 66837.5 60 54974.5 61 45212.0 62 37365.0 63 29290.5 64 21971.0 65 17096.5 66 13478.5 67 10584.5 68 8357.0 69 6546.0 70 5111.5 71 3962.0 72 3118.5 73 2682.5 74 2152.0 75 1626.0 76 1197.0 77 814.0 78 492.5 79 251.0 80 141.5 81 79.0 82 50.5 83 29.5 84 13.0 85 8.0 86 4.5 87 1.0 88 2.5 89 3.0 90 1.5 91 0.0 92 0.5 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1868479530879917 2 0.0 3 0.01271904193903711 4 0.013311435673184043 5 0.006864797978055645 6 0.10715357250010715 7 0.14175633591233688 8 0.12349667022451373 9 0.1437425972562413 10-11 0.11476757431840745 12-13 0.11408806385865067 14-15 0.1164576387952384 16-17 0.06620871146348084 18-19 0.07894517674763991 20-21 0.03620571116345084 22-23 0.08347524647935177 24-25 0.05714857200005715 26-27 0.06516331075616272 28-29 0.03935933663052716 30-31 0.02474115007319547 32-33 0.0311703644232019 34-35 0.019305066395141256 36-37 0.02531612046222044 38-39 0.03247711530734955 40-41 0.02606532430246509 42-43 0.01324174229269617 44-45 0.026256981098806743 46-47 0.032982392315886636 48-49 0.008885906012204008 50-51 0.015559047193917997 52-53 0.006690564526835959 54-55 0.012893275390256795 56-57 0.004739149873175471 58-59 0.0037460192012232583 60-61 0.022092801614656238 62-63 0.010976707426840244 64-65 0.007404921676836674 66-67 0.040369890647601346 68-69 0.08988703748423622 70-71 0.02115194097806993 72-73 0.043889406362239015 74-75 0.08509561757569485 76-77 0.24821297460756528 78-79 0.08012996421593378 80-81 0.01618628761830887 82-83 0.011987261443914427 84-85 0.012771311974403015 86-87 0.263928831907581 88-89 0.6212990637042799 90-91 0.26845890163929287 92-93 0.35339770910888996 94-95 0.001324174229269617 96-97 0.004948230014639095 98-99 0.0036240557853694775 100-101 0.005366390297566343 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2869713.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.31077306308052 #Duplication Level Percentage of deduplicated Percentage of total 1 77.78609851642959 48.469119321196686 2 12.412926079835392 15.469180400188334 3 4.403880765892381 8.23227645001156 4 1.9828703825409764 4.942167456800577 5 1.0703585099162323 3.334743310376368 6 0.6196669748235996 2.316715694575137 7 0.38540702781232733 1.6810506892851202 8 0.25999727734102795 1.296050507633248 9 0.19376012480277766 1.0866008848734034 >10 0.8231697194682013 8.704152583671222 >50 0.04249557724494102 1.7941287031260882 >100 0.01790902057026714 1.8797406222342397 >500 0.0010669401203551934 0.43185219042270073 >1k 3.9308320195633215E-4 0.36222118560526884 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 3.484669024393729E-5 0.0 3.484669024393729E-5 0.0 12-13 0.0 3.484669024393729E-5 0.0 6.969338048787458E-5 0.0 14-15 0.0 5.2270035365905936E-5 0.0 6.969338048787458E-5 0.0 16-17 0.0 1.0454007073181186E-4 0.0 6.969338048787458E-5 0.0 18-19 0.0 1.0454007073181186E-4 0.0 1.219634158537805E-4 0.0 20-21 0.0 1.0454007073181186E-4 0.0 2.43926831707561E-4 3.484669024393729E-5 22-23 0.0 1.0454007073181186E-4 0.0 5.052770085370907E-4 3.484669024393729E-5 24-25 0.0 1.0454007073181186E-4 0.0 0.0013241742292696168 3.484669024393729E-5 26-27 0.0 1.0454007073181186E-4 0.0 0.0024566916621975785 3.484669024393729E-5 28-29 0.0 1.0454007073181186E-4 0.0 0.008607132490252509 3.484669024393729E-5 30-31 0.0 1.3938676097574915E-4 0.0 0.035857244261011466 3.484669024393729E-5 32-33 0.0 1.3938676097574915E-4 0.0 0.09596778493180327 3.484669024393729E-5 34-35 0.0 1.3938676097574915E-4 0.0 0.17959984151725278 3.484669024393729E-5 36-37 0.0 1.3938676097574915E-4 0.0 0.3159723637869013 3.484669024393729E-5 38-39 0.0 1.3938676097574915E-4 0.0 0.5347224617932176 3.484669024393729E-5 40-41 0.0 1.3938676097574915E-4 0.0 0.7796946942080967 3.484669024393729E-5 42-43 0.0 1.568101060977178E-4 0.0 1.0389366462778682 3.484669024393729E-5 44-45 0.0 1.7423345121968644E-4 0.0 1.3613904944501418 3.484669024393729E-5 46-47 0.0 2.0908014146362372E-4 0.0 1.7386581863761288 3.484669024393729E-5 48-49 0.0 2.613501768295297E-4 0.0 2.1337673837070117 3.484669024393729E-5 50-51 0.0 3.310435573174042E-4 0.0 2.5468226265135225 3.484669024393729E-5 52-53 0.0 3.833135926833101E-4 0.0 2.965941193422478 3.484669024393729E-5 54-55 0.0 3.833135926833101E-4 0.0 3.4441945936753955 3.484669024393729E-5 56-57 0.0 3.833135926833101E-4 0.0 4.0026999215601 3.484669024393729E-5 58-59 0.0 3.833135926833101E-4 0.0 4.586852413464342 3.484669024393729E-5 60-61 0.0 3.833135926833101E-4 0.0 5.200119315067395 3.484669024393729E-5 62-63 0.0 3.833135926833101E-4 0.0 5.818421563410697 3.484669024393729E-5 64-65 0.0 3.833135926833101E-4 0.0 6.496642695628448 3.484669024393729E-5 66-67 0.0 3.833135926833101E-4 0.0 7.263043377508483 3.484669024393729E-5 68-69 0.0 3.833135926833101E-4 0.0 8.092812765597117 3.484669024393729E-5 70-71 0.0 3.833135926833101E-4 0.0 8.953578284657734 3.484669024393729E-5 72-73 0.0 3.833135926833101E-4 0.0 9.836436605333006 3.484669024393729E-5 74-75 0.0 4.1816028292724743E-4 0.0 10.76309721564491 3.484669024393729E-5 76-77 0.0 4.1816028292724743E-4 0.0 11.76736140513006 3.484669024393729E-5 78-79 0.0 4.1816028292724743E-4 0.0 12.844943030888455 3.484669024393729E-5 80-81 0.0 4.1816028292724743E-4 0.0 13.942909970439551 3.484669024393729E-5 82-83 0.0 4.1816028292724743E-4 0.0 15.054571659256517 3.484669024393729E-5 84-85 0.0 4.3558362804921606E-4 0.0 16.179022083393008 3.484669024393729E-5 86-87 0.0 4.530069731711847E-4 0.0 17.3585128547698 3.484669024393729E-5 88-89 0.0 4.530069731711847E-4 0.0 18.597155882835672 3.484669024393729E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2800 0.0 51.1321 1 GTATCAA 5405 0.0 46.90473 1 TCAACGC 6995 0.0 34.957317 4 ATCAACG 7045 0.0 34.776615 3 CAACGCA 7110 0.0 34.120613 5 TATCAAC 7390 0.0 33.599895 2 AACGCAG 7555 0.0 32.173702 6 ACGCAGA 8670 0.0 27.268457 7 CGCAGAG 9005 0.0 25.726393 8 GTACATG 8360 0.0 24.294434 1 TACATGG 8575 0.0 22.810972 2 ACATGGG 8755 0.0 21.910074 3 GCAGAGT 10075 0.0 21.627327 9 GTGGTAT 1595 0.0 20.5766 1 AGAGTAC 8795 0.0 19.45557 10-11 CAGAGTA 9110 0.0 19.147564 10-11 GTATACG 150 7.654456E-4 19.025898 1 CATGGGG 6270 0.0 19.00749 4 TTAACGC 210 1.964255E-5 18.087948 4 GAGTACA 6725 0.0 17.611332 1 >>END_MODULE