##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920893_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3543826 Sequences flagged as poor quality 0 Sequence length 98 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.24474677932833 31.0 28.0 31.0 16.0 34.0 2 28.26944889506426 31.0 28.0 33.0 16.0 34.0 3 28.34903463093278 31.0 28.0 34.0 16.0 34.0 4 31.77659766591249 35.0 32.0 37.0 19.0 37.0 5 31.71262133073125 35.0 32.0 37.0 19.0 37.0 6 31.83475514881374 35.0 32.0 37.0 19.0 37.0 7 31.660202842916103 35.0 32.0 37.0 18.0 37.0 8 31.59156798330392 35.0 32.0 37.0 17.0 37.0 9 32.82433364392044 37.0 32.0 39.0 17.0 39.0 10-11 32.61836162384948 37.0 32.0 39.0 17.0 39.0 12-13 32.4351404386107 37.0 32.0 39.0 16.0 39.0 14-15 33.161732263378624 38.0 32.0 40.0 14.5 41.0 16-17 33.02738523279642 38.0 32.0 40.0 11.0 41.0 18-19 32.88815802468857 38.0 32.0 40.0 10.0 41.0 20-21 32.7871412140438 38.0 32.0 40.0 10.0 41.0 22-23 32.556423481288306 38.0 31.0 40.0 10.0 41.0 24-25 32.353182266849444 37.0 31.0 40.0 9.5 41.0 26-27 32.38607087368285 38.0 31.0 40.0 8.5 41.0 28-29 32.22009221107356 37.5 31.0 40.0 8.0 41.0 30-31 31.964086413949218 37.0 30.0 40.0 5.0 41.0 32-33 31.712123704719136 37.0 30.0 40.0 2.0 41.0 34-35 31.37593973293271 37.0 30.0 40.0 2.0 41.0 36-37 31.06548219353885 37.0 30.0 40.0 2.0 41.0 38-39 30.85514554044132 36.0 29.0 40.0 2.0 41.0 40-41 30.64731027990652 36.0 29.0 39.5 2.0 41.0 42-43 30.407763671241195 36.0 28.0 39.0 2.0 40.5 44-45 30.11873184518653 36.0 27.5 39.0 2.0 40.0 46-47 29.860344018018942 35.0 27.0 39.0 2.0 40.0 48-49 29.55020421431526 35.0 26.5 39.0 2.0 40.0 50-51 28.473202973283676 34.0 25.0 38.0 2.0 39.5 52-53 28.93518347119751 34.5 26.5 38.5 2.0 39.5 54-55 29.55426423306336 35.0 27.0 39.0 2.0 40.0 56-57 29.49797408224896 35.0 27.0 39.0 2.0 40.0 58-59 29.241978020365558 35.0 26.0 39.0 2.0 40.0 60-61 28.913625132836657 35.0 26.0 39.0 2.0 40.0 62-63 28.503773887318395 34.0 25.5 38.5 2.0 40.0 64-65 28.074387540471797 34.0 24.5 38.0 2.0 40.0 66-67 27.68023006772906 34.0 23.0 37.5 2.0 40.0 68-69 27.23106199345002 33.5 22.0 37.0 2.0 39.5 70-71 26.887543293604146 33.0 22.0 36.5 2.0 39.0 72-73 26.414794772655316 33.0 20.5 36.0 2.0 39.0 74-75 25.95766313018754 32.5 19.0 35.5 2.0 38.5 76-77 25.528751834881284 32.0 17.5 35.0 2.0 37.5 78-79 25.050439976454825 32.0 13.0 35.0 2.0 37.0 80-81 24.585538906255557 31.5 7.5 35.0 2.0 36.0 82-83 24.08925734502766 31.0 4.5 34.5 2.0 36.0 84-85 23.678966038400304 31.0 2.0 34.0 2.0 35.5 86-87 23.211050429676853 31.0 2.0 34.0 2.0 35.0 88-89 22.66566106800955 30.0 2.0 34.0 2.0 35.0 90-91 22.15112197946513 30.0 2.0 34.0 2.0 35.0 92-93 21.590725250054604 29.5 2.0 34.0 2.0 35.0 94-95 20.943531510858605 29.0 2.0 34.0 2.0 35.0 96-97 20.283606051764394 29.0 2.0 34.0 2.0 35.0 98 19.879341705828672 29.0 2.0 34.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 212337.0 3 35713.0 4 25816.0 5 20815.0 6 19080.0 7 19421.0 8 22361.0 9 25359.0 10 27673.0 11 29511.0 12 30409.0 13 29662.0 14 28716.0 15 30059.0 16 32133.0 17 34200.0 18 35211.0 19 35364.0 20 36571.0 21 38840.0 22 41753.0 23 46227.0 24 52194.0 25 59304.0 26 68086.0 27 77571.0 28 89307.0 29 103221.0 30 119263.0 31 139747.0 32 163876.0 33 197066.0 34 242339.0 35 304690.0 36 382269.0 37 417585.0 38 245897.0 39 24178.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.12513155494833 17.2604623710365 12.316856819502647 25.297549254512518 2 16.21583937928397 18.704291978137203 39.45890564647806 25.620962996100765 3 20.65537080338735 22.252747175211006 27.78621494502827 29.305667076373375 4 13.407441566952258 14.572264276719407 35.569863680210965 36.45043047611737 5 14.62317962774908 36.499539667872206 34.06762564018905 14.809655064189661 6 35.288911017066354 33.82215719247619 16.577589462471572 14.31134232798588 7 30.57245980679718 30.491518836978738 19.739267348757082 19.196754007467 8 27.172503553662775 34.73135663986756 19.12484369386772 18.971296112601934 9 26.723095321271416 15.89045286083459 18.853352280839974 38.53309953705402 10-11 26.227839628695087 25.181978460567763 26.81700512384073 21.77317678689642 12-13 26.73739960233183 22.064601042199897 26.988693604179637 24.20930575128864 14-15 23.37980002096666 23.866477656328243 24.39438313648519 28.359339186219913 16-17 23.980250245580883 26.94759539558064 25.20873316949046 23.86342118934801 18-19 23.939473193551496 26.24785938391188 26.60303263531806 23.20963478721856 20-21 24.54308123488192 25.495275669156065 26.535042170002487 23.426600925959526 22-23 24.003166829522634 25.402395938707784 26.34336402764677 24.25107320412281 24-25 23.84755814427916 25.586108762439117 26.474125603417324 24.092207489864396 26-27 23.699113055053616 25.87489414069637 26.334533189768493 24.091459614481526 28-29 23.800574387144387 26.018221489148928 26.21378246809164 23.96742165561504 30-31 23.996262628943256 25.770624568401118 26.12893280806491 24.104179994590723 32-33 23.735043470775587 25.77834631835481 26.187187516316534 24.299422694553062 34-35 24.067257583647695 25.89591921344563 26.14315768554669 23.893665517359985 36-37 24.262332274123956 25.541168079654813 26.129163990284198 24.06733565593703 38-39 23.992126479757488 25.736569292704125 26.263714739096102 24.00758948844229 40-41 24.18190333203306 25.656450427730356 26.2226516787169 23.938994561519692 42-43 24.0107208098354 25.55585370214476 26.149697481958434 24.283728006061413 44-45 23.930500010977113 25.761878828267694 26.281499884209175 24.02612127654602 46-47 24.201479856532583 25.670841053165177 26.028829738881427 24.098849351420814 48-49 23.96211042185749 25.771444846075003 26.061816990629715 24.20462774143779 50-51 24.00507850366832 25.92020971132828 26.119327841770478 23.95538394323292 52-53 23.932991676035652 25.760658888639803 26.218886451898506 24.087462983426043 54-55 23.593947501176153 25.66468090895178 26.517262488451053 24.224109101421014 56-57 23.808186106576716 25.78659412390606 26.39509313559453 24.01012663392269 58-59 23.776904059691837 25.51129646852391 26.432331245607294 24.279468226176963 60-61 23.708575009803052 25.536278103035208 26.569324597848087 24.18582228931365 62-63 23.62360736168513 25.580878541260056 26.620757640566882 24.17475645648793 64-65 23.443430342494636 25.39476100648894 26.538247237324796 24.623561413691622 66-67 23.434857566922034 25.56140408564977 26.494361014150048 24.509377333278152 68-69 23.679807013331576 25.318791340247365 26.53731007124387 24.46409157517719 70-71 23.439700023674593 25.199931355013522 26.57465765295315 24.78571096835874 72-73 23.38444349022584 25.248567574887403 26.658602528452775 24.708386406433984 74-75 23.386470064159855 25.36436190767922 26.614124454210902 24.635043573950018 76-77 23.37323427504387 25.027623402223632 26.75270239397157 24.846439928760923 78-79 23.29705259456777 25.13061377362053 26.7475634568494 24.8247701749623 80-81 23.373811093216634 25.078330807720445 26.698998475571774 24.848859623491144 82-83 23.272249248434722 25.12178783350444 26.785027698485997 24.820935219574842 84-85 23.317163440120126 24.999536378437508 26.787600876619898 24.89569930482247 86-87 23.183576629059406 24.995134368569847 26.833302688701927 24.987986313668824 88-89 23.08365365485141 24.855354390416764 26.86296847243276 25.198023482299064 90-91 23.09468838518891 24.8345146234199 26.884033103304557 25.186763888086638 92-93 23.135953876136394 24.656287155251995 27.021780099939 25.18597886867261 94-95 23.06000209807941 24.559817418957437 27.10244332814288 25.27773715482028 96-97 23.182560977698788 24.257408431697854 27.130501456267314 25.429529134336043 98 23.084367176807476 24.257509840128698 27.082876788734662 25.575246194329164 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 39.0 1 35.5 2 62.0 3 109.5 4 122.0 5 130.5 6 210.5 7 380.0 8 581.0 9 744.0 10 799.5 11 888.0 12 1073.0 13 1240.5 14 1387.5 15 1567.0 16 1726.5 17 1795.0 18 1853.0 19 1876.0 20 1926.5 21 2060.0 22 2245.0 23 2617.5 24 3212.0 25 4142.5 26 5667.5 27 7718.0 28 10484.0 29 14565.0 30 20046.0 31 27894.0 32 34695.5 33 39643.5 34 46654.0 35 54840.0 36 63045.5 37 71872.0 38 80164.5 39 89084.5 40 99234.0 41 108390.5 42 118040.5 43 127392.0 44 135473.5 45 143033.0 46 150448.5 47 158316.5 48 163686.5 49 165134.5 50 165223.0 51 163962.0 52 160100.5 53 156730.5 54 151230.5 55 142124.0 56 130983.0 57 118103.5 58 107330.5 59 94547.0 60 78612.0 61 64738.0 62 52913.0 63 40512.5 64 29404.0 65 21536.0 66 15809.0 67 11883.0 68 9046.0 69 6860.0 70 5110.5 71 3708.5 72 2820.0 73 2271.0 74 1742.0 75 1294.0 76 860.5 77 474.5 78 274.0 79 162.5 80 98.5 81 68.0 82 47.5 83 31.0 84 24.0 85 16.5 86 10.0 87 10.0 88 9.0 89 8.0 90 8.5 91 6.0 92 4.0 93 4.5 94 5.0 95 3.0 96 1.0 97 1.0 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.36632724067152284 2 0.023167051655470672 3 0.01808779550689001 4 0.015237768445741977 5 0.02065564167089468 6 0.02347745064232838 7 0.014193699126311505 8 0.00843720882458676 9 0.0 10-11 0.0 12-13 0.004740639072008615 14-15 0.0029487903751482156 16-17 0.005276782776581017 18-19 0.037515950275211034 20-21 0.07738811104156919 22-23 0.09527837992045884 24-25 0.06282757674897131 26-27 0.07249227247613173 28-29 0.05542032819895785 30-31 0.04977671025609045 32-33 0.01808779550689001 34-35 0.3218696403265849 36-37 0.49694877795918874 38-39 0.45295677609453733 40-41 0.4619301286236966 42-43 0.41240738117503506 44-45 0.3880974968861338 46-47 0.3862068848752732 48-49 0.37689491526954205 50-51 0.374129542477537 52-53 0.43283727812821504 54-55 0.4335991665505022 56-57 0.4041253718438772 58-59 0.3902279626595662 60-61 0.40391373617101967 62-63 0.3853462331389859 64-65 0.43348629419164486 66-67 0.4532953931711094 68-69 0.3964218333518632 70-71 0.3559429836566468 72-73 0.34258171817690825 74-75 0.32606002664916395 76-77 0.3243669412663037 78-79 0.3235203985748736 80-81 0.33889925746918725 82-83 0.33477941637089403 84-85 0.3343984721597505 86-87 0.3215874594294415 88-89 0.36312448748894555 90-91 0.34126957700519156 92-93 0.3321692430723179 94-95 0.3393084197700451 96-97 0.3392519835906165 98 0.3346665440120367 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 3543826.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.33291698789143 #Duplication Level Percentage of deduplicated Percentage of total 1 72.26157514310037 36.3713586309195 2 12.221274716303752 12.302648115638663 3 5.447603997203061 8.225813993223817 4 3.0734279234205775 6.187783701511818 5 1.819784388941753 4.5797528292233 6 1.2400063747547612 3.7447882754992547 7 0.8352724720769773 2.942918999952495 8 0.5993977324291486 2.4135549047269356 9 0.4388098185073638 1.9877920351562564 >10 1.9727941726801552 16.335278214554723 >50 0.06587691531474997 2.238360736397871 >100 0.022649538752785223 1.9556273608370935 >500 9.613226263887339E-4 0.3308760275062544 >1k 5.654838880754458E-4 0.38344617485193344 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.821808971433699E-5 2 0.0 0.0 0.0 2.821808971433699E-5 2.821808971433699E-5 3 0.0 0.0 0.0 2.821808971433699E-5 2.821808971433699E-5 4 0.0 0.0 0.0 5.643617942867398E-5 2.821808971433699E-5 5 0.0 0.0 0.0 5.643617942867398E-5 2.821808971433699E-5 6 0.0 0.0 0.0 5.643617942867398E-5 2.821808971433699E-5 7 0.0 0.0 0.0 5.643617942867398E-5 2.821808971433699E-5 8 0.0 0.0 0.0 5.643617942867398E-5 2.821808971433699E-5 9 0.0 0.0 0.0 5.643617942867398E-5 1.1287235885734796E-4 10-11 0.0 0.0 0.0 8.465426914301097E-5 1.1287235885734796E-4 12-13 0.0 0.0 0.0 1.1287235885734796E-4 1.1287235885734796E-4 14-15 0.0 0.0 0.0 1.1287235885734796E-4 1.5519949342885346E-4 16-17 0.0 0.0 0.0 1.2698140371451646E-4 1.6930853828602194E-4 18-19 0.0 0.0 0.0 1.8341758314319043E-4 1.6930853828602194E-4 20-21 0.0 0.0 0.0 2.2574471771469591E-4 1.6930853828602194E-4 22-23 0.0 0.0 0.0 3.103989868577069E-4 1.9752662800035892E-4 24-25 0.0 0.0 0.0 6.349070185725824E-4 2.2574471771469591E-4 26-27 0.0 0.0 0.0 0.0010017421848589631 2.2574471771469591E-4 28-29 0.0 0.0 0.0 0.0038376602011498304 2.2574471771469591E-4 30-31 0.0 0.0 0.0 0.016691000066030328 2.2574471771469591E-4 32-33 0.0 0.0 0.0 0.042030844629504946 2.2574471771469591E-4 34-35 0.0 0.0 0.0 0.07538462667185128 2.539628074290329E-4 36-37 1.4109044857168495E-5 1.4109044857168495E-5 0.0 0.1361805009613903 2.539628074290329E-4 38-39 2.821808971433699E-5 2.821808971433699E-5 0.0 0.24192779216586818 2.9628994200053837E-4 40-41 2.821808971433699E-5 2.821808971433699E-5 0.0 0.36426732012237617 3.5272612142921237E-4 42-43 2.821808971433699E-5 2.821808971433699E-5 0.0 0.49418340516718373 3.809442111435494E-4 44-45 2.821808971433699E-5 2.821808971433699E-5 0.0 0.6497215156726093 3.950532560007179E-4 46-47 2.821808971433699E-5 2.821808971433699E-5 0.0 0.8374000303626645 4.0916230085788637E-4 48-49 4.2327134571505486E-5 2.821808971433699E-5 0.0 1.0451133887498991 4.2327134571505486E-4 50-51 5.643617942867398E-5 2.821808971433699E-5 0.0 1.2810307278066135 4.2327134571505486E-4 52-53 5.643617942867398E-5 2.821808971433699E-5 0.0 1.522563466716481 4.3738039057222334E-4 54-55 5.643617942867398E-5 2.821808971433699E-5 0.0 1.7921449868023993 4.5148943542939183E-4 56-57 5.643617942867398E-5 2.821808971433699E-5 0.0 2.1034046253963936 4.5148943542939183E-4 58-59 5.643617942867398E-5 2.821808971433699E-5 0.0 2.448652953051307 4.5148943542939183E-4 60-61 5.643617942867398E-5 2.821808971433699E-5 0.0 2.8278899697671385 4.5148943542939183E-4 62-63 5.643617942867398E-5 2.821808971433699E-5 0.0 3.2142661631806977 4.7970752514372886E-4 64-65 5.643617942867398E-5 2.821808971433699E-5 0.0 3.6152452180214265 4.938165700008974E-4 66-67 5.643617942867398E-5 2.821808971433699E-5 0.0 4.072378271393686 5.079256148580658E-4 68-69 5.643617942867398E-5 2.821808971433699E-5 0.0 4.586413102674905 5.220346597152343E-4 70-71 5.643617942867398E-5 2.821808971433699E-5 0.0 5.142944377065917 5.361437045724028E-4 72-73 5.643617942867398E-5 2.821808971433699E-5 0.0 5.711341358181807 5.925798840010769E-4 74-75 5.643617942867398E-5 2.821808971433699E-5 0.0 6.284521305504277 5.925798840010769E-4 76-77 5.643617942867398E-5 2.821808971433699E-5 0.0 6.899732097456251 5.925798840010769E-4 78-79 5.643617942867398E-5 2.821808971433699E-5 0.0 7.578320718906628 5.925798840010769E-4 80-81 5.643617942867398E-5 2.821808971433699E-5 0.0 8.300816687952512 5.925798840010769E-4 82-83 7.054522428584247E-5 2.821808971433699E-5 0.0 9.040201183692428 5.925798840010769E-4 84-85 8.465426914301097E-5 2.821808971433699E-5 0.0 9.770753417351756 5.925798840010769E-4 86 8.465426914301097E-5 2.821808971433699E-5 0.0 10.32751043646048 5.925798840010769E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 4580 0.0 39.591415 1 GGTATCA 3020 0.0 35.812218 1 CAACGCA 5725 0.0 31.80752 5 TCAACGC 5670 0.0 31.54978 4 AACGCAG 6110 0.0 30.322786 6 ATCAACG 5950 0.0 30.219263 3 TATCAAC 6075 0.0 29.749315 2 GTACATG 9870 0.0 25.412632 1 ACGCAGA 7445 0.0 24.26537 7 TACATGG 10185 0.0 23.824385 2 ACATGGG 10150 0.0 23.408764 3 CGCAGAG 7810 0.0 22.776825 8 GTATAGG 755 0.0 20.725368 1 CATGGGG 7020 0.0 19.405914 4 GAGTACA 7315 0.0 18.371254 1 GCAGAGT 9285 0.0 18.072483 9 GTGTAGC 2285 0.0 16.717148 1 GTATAGC 1250 0.0 16.568104 1 AGTACAT 7195 0.0 16.448109 2 GTACCGT 365 3.6598067E-9 16.333508 6 >>END_MODULE