##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920892_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4035923 Sequences flagged as poor quality 0 Sequence length 98 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.624488376017084 31.0 30.0 33.0 22.0 34.0 2 28.646586914567003 31.0 28.0 34.0 18.0 34.0 3 28.722298963582805 31.0 28.0 34.0 22.0 34.0 4 32.198255021218195 35.0 32.0 37.0 22.0 37.0 5 32.15346625790433 35.0 32.0 37.0 22.0 37.0 6 32.277757281296 35.0 32.0 37.0 23.0 37.0 7 32.11087228373782 35.0 32.0 37.0 22.0 37.0 8 32.047452590151 35.0 32.0 37.0 22.0 37.0 9 33.31820354352647 37.0 33.0 39.0 22.0 39.0 10-11 33.12054950007718 37.0 32.5 39.0 19.0 39.0 12-13 32.95138336385506 37.0 32.0 39.0 18.0 39.0 14-15 33.718052970782644 38.0 32.0 40.0 17.0 41.0 16-17 33.601596214793986 38.0 32.0 40.0 17.0 41.0 18-19 33.473334476401064 38.0 32.0 40.0 17.5 41.0 20-21 33.37330618051931 38.0 32.0 40.0 16.5 41.0 22-23 33.1460003077363 38.0 32.0 40.0 15.5 41.0 24-25 32.94796233723983 38.0 32.0 40.0 12.0 41.0 26-27 32.98833178928339 38.0 32.0 40.0 10.5 41.0 28-29 32.82851382447088 38.0 31.5 40.0 10.0 41.0 30-31 32.58502156755716 38.0 31.0 40.0 9.0 41.0 32-33 32.34142834241386 37.0 31.0 40.0 8.5 41.0 34-35 32.01813835397752 37.0 30.0 40.0 6.5 41.0 36-37 31.709911214857172 37.0 30.0 40.0 2.0 41.0 38-39 31.5054807784985 37.0 30.0 40.0 2.0 41.0 40-41 31.306834520876635 37.0 30.0 40.0 2.0 41.0 42-43 31.06954889872775 36.0 29.5 40.0 2.0 41.0 44-45 30.787001882840677 36.0 29.0 39.0 2.0 41.0 46-47 30.535859950747323 36.0 28.0 39.0 2.0 40.0 48-49 30.23199748855466 35.5 28.0 39.0 2.0 40.0 50-51 29.08401027472526 34.0 25.5 38.0 2.0 39.5 52-53 29.535169402389492 34.5 27.5 38.5 2.0 39.5 54-55 30.177368844747534 35.0 28.0 39.0 2.0 40.0 56-57 30.119092460386383 35.0 28.0 39.0 2.0 41.0 58-59 29.864151892887946 35.0 28.0 39.0 2.0 40.0 60-61 29.531636505453648 35.0 27.5 39.0 2.0 40.0 62-63 29.1267857439302 34.5 26.5 38.5 2.0 40.0 64-65 28.70206158541677 34.0 26.0 38.0 2.0 40.0 66-67 28.30797502826491 34.0 26.0 37.5 2.0 40.0 68-69 27.85448421587825 34.0 25.0 37.0 2.0 39.5 70-71 27.520994825718923 34.0 25.0 36.0 2.0 39.0 72-73 27.057357759303137 33.0 24.0 36.0 2.0 39.0 74-75 26.61874532789649 33.0 22.5 35.0 2.0 38.0 76-77 26.205337911550842 32.5 21.5 35.0 2.0 37.0 78-79 25.756206325046342 32.0 20.0 35.0 2.0 37.0 80-81 25.31794313221536 32.0 18.5 35.0 2.0 36.0 82-83 24.846451604750634 32.0 16.5 35.0 2.0 36.0 84-85 24.455702574107583 31.0 10.0 34.5 2.0 35.0 86-87 24.00758401485856 31.0 4.5 34.0 2.0 35.0 88-89 23.48645526686213 31.0 2.0 34.0 2.0 35.0 90-91 22.99148249359564 31.0 2.0 34.0 2.0 35.0 92-93 22.452097450818563 30.0 2.0 34.0 2.0 35.0 94-95 21.81472651980724 30.0 2.0 34.0 2.0 35.0 96-97 21.175834003770635 29.0 2.0 34.0 2.0 35.0 98 20.787950364761667 29.0 2.0 34.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 208424.0 3 35233.0 4 26030.0 5 21337.0 6 20065.0 7 20115.0 8 23066.0 9 26424.0 10 28889.0 11 31253.0 12 32251.0 13 32095.0 14 29918.0 15 30766.0 16 33224.0 17 35375.0 18 36801.0 19 37276.0 20 38560.0 21 41005.0 22 44183.0 23 49431.0 24 56823.0 25 65360.0 26 75953.0 27 86698.0 28 101375.0 29 116820.0 30 135588.0 31 159417.0 32 191219.0 33 232017.0 34 288275.0 35 365734.0 36 461751.0 37 501996.0 38 288126.0 39 27048.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.87650928263221 17.275419987813827 12.78506323132593 25.06300749822803 2 16.36872823702896 18.833641061227524 38.93731025167598 25.860320450067537 3 19.757214930508574 22.809499664698475 28.2560058128844 29.17727959190855 4 13.506230436567954 15.027739153082903 35.41444924021212 36.05158117013703 5 14.97449229316577 36.29068253096922 33.713022499073745 15.021802676791271 6 35.074598753820894 33.8264122363666 16.71055703343747 14.388431976375038 7 30.644729623037907 30.58847698077448 20.072702203468037 18.69409119271957 8 27.528657590730454 33.885959391215145 19.2831761481621 19.30220686989231 9 27.198338521324615 15.507307745960466 18.738563644549213 38.5557900881657 10-11 26.2913379983575 24.746052356581355 26.958174721231504 22.004434923829645 12-13 26.892429069567914 21.88758794097478 26.877314093538164 24.342668895919143 14-15 24.0053050233566 23.659883827174184 24.180189912898257 28.154621236570964 16-17 24.383256558011652 26.53928005186717 24.985866741366756 24.09159664875442 18-19 24.352139417178297 25.841428079246302 26.27912683324617 23.527305670329234 20-21 25.152494815176286 25.12433906515471 25.938636582291164 23.784529537377843 22-23 24.656157823853356 24.820336534115505 25.897554716833266 24.625950925197873 24-25 24.452756251044384 25.15004390742896 25.87885516399462 24.518344677532042 26-27 24.350818607579257 25.293592507100932 25.846901581997066 24.508687303322745 28-29 24.27857524281352 25.482974420353845 25.83116124582709 24.40728909100555 30-31 24.639517930181633 25.23666387080517 25.62247788358697 24.501340315426226 32-33 24.272920031859776 25.245812952179108 25.597631036220918 24.883635979740195 34-35 24.748482292521974 25.26233139656433 25.720906390989683 24.26827991992401 36-37 24.82817775285387 25.03274583405756 25.585577688806506 24.55349872428207 38-39 24.67694725532576 25.07374168698678 25.60950066476726 24.6398103929202 40-41 24.73490057184507 25.08430059753478 25.715503344143592 24.465295486476556 42-43 24.734661867270844 24.983286129764323 25.586129988253635 24.69592201471119 44-45 24.522308956230564 25.05740152937251 25.697763924216176 24.72252559018075 46-47 24.499344564863204 25.032647385846087 25.6033734388331 24.86463461045761 48-49 24.463842169819262 25.114706865896903 25.57110930291181 24.850341661372024 50-51 24.38805979800713 25.2446815707373 25.68022372023431 24.687034911021264 52-53 24.464717345823242 24.98420387662624 25.83948401238207 24.711594765168446 54-55 24.257499230706152 24.9461618738592 26.007382981167016 24.78895591426763 56-57 24.173848617634597 25.012097423255064 25.88899578574288 24.925058173367457 58-59 24.254199285905916 24.76312222819643 25.926040628513242 25.056637857384413 60-61 24.18603401441696 24.77725160694678 26.13611414251245 24.900600236123807 62-63 24.017337284177863 24.86686420889313 26.112748313998864 25.003050192930143 64-65 23.930037296486287 24.75631112441677 26.04462886549449 25.269022713602457 66-67 23.961909853885057 24.828687932511635 25.982172592956555 25.227229620646757 68-69 24.12328399248761 24.577875865459113 26.071248789884073 25.227591352169203 70-71 23.86247201103184 24.491038743358896 26.089740505322645 25.556748740286622 72-73 23.859476823546668 24.595770232000735 26.074349137363033 25.47040380708956 74-75 23.829936968209665 24.608338313365145 26.08297047876916 25.478754239656038 76-77 23.773064754389225 24.377485456255037 26.26729914841176 25.582150640943972 78-79 23.65892974399583 24.353339921668336 26.36261637358271 25.625113960753126 80-81 23.693381436875786 24.365719687222555 26.33187864123653 25.60902023466513 82-83 23.682838247192816 24.390963061432185 26.368804917866296 25.557393773508704 84-85 23.514207678530763 24.328424406538296 26.319495755198723 25.837872159732218 86-87 23.52363523463715 24.14979252379706 26.499718733213168 25.826853508352617 88-89 23.376164283441508 24.042048181430577 26.500271747476155 26.08151578765176 90-91 23.447678800037693 24.05878130568601 26.576637502849955 25.916902391426337 92-93 23.519161835710662 23.872793160417906 26.601244850878558 26.006800152992877 94-95 23.234463022243425 23.77141405184709 26.75861904359964 26.235503882309843 96-97 23.401736301764508 23.50619485329994 26.847762134340687 26.244306710594866 98 23.353333160963892 23.384409382731764 26.91688080255213 26.34537665375222 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 100.0 1 72.0 2 91.0 3 146.5 4 146.5 5 162.5 6 265.5 7 490.5 8 752.0 9 918.0 10 966.0 11 1051.5 12 1211.5 13 1355.0 14 1599.5 15 1839.5 16 1953.5 17 2055.0 18 2089.0 19 2000.0 20 1956.0 21 2020.5 22 2123.0 23 2348.5 24 2733.5 25 3292.5 26 4123.0 27 5366.5 28 6930.5 29 9471.5 30 13488.0 31 18641.0 32 24879.5 33 31772.5 34 40360.5 35 50396.5 36 61163.0 37 72705.0 38 84544.5 39 96180.0 40 106557.0 41 116024.0 42 127947.5 43 140512.0 44 149951.0 45 159734.0 46 169507.5 47 178294.5 48 187283.5 49 191240.0 50 190834.0 51 190759.0 52 189067.0 53 188527.0 54 184703.5 55 175395.5 56 162401.0 57 146935.0 58 133623.0 59 118821.5 60 101244.0 61 82913.0 62 66774.0 63 51502.0 64 38319.0 65 29678.0 66 22613.0 67 16684.5 68 12484.0 69 9869.5 70 7754.0 71 5992.0 72 4952.0 73 4189.5 74 3341.5 75 2455.0 76 1678.5 77 1058.5 78 592.5 79 292.5 80 177.5 81 115.5 82 69.5 83 42.5 84 32.0 85 23.0 86 15.5 87 12.0 88 10.0 89 8.5 90 9.0 91 6.5 92 6.0 93 4.0 94 1.5 95 3.0 96 3.5 97 1.5 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.3709932027940077 2 0.02410848769909634 3 0.018558332257577758 4 0.016154916731563017 5 0.021506852335884504 6 0.02153162981553414 7 0.013801056164847546 8 0.00849867551982533 9 0.0 10-11 6.194369912409131E-5 12-13 0.004720109873255758 14-15 0.0031095736960293843 16-17 0.005686431579591583 18-19 0.03501057874493641 20-21 0.07430766146925993 22-23 0.0924571653126187 24-25 0.060382717906164216 26-27 0.06998399127039838 28-29 0.053742353360061626 30-31 0.04917090836470369 32-33 0.018360112420380666 34-35 0.32815294047978616 36-37 0.49914232754192783 38-39 0.4547039177903047 40-41 0.46460252091033455 42-43 0.4164103229917914 44-45 0.39092668517214035 46-47 0.388832988141746 48-49 0.3802971464024462 50-51 0.3762955834390299 52-53 0.4343987732174276 54-55 0.4367650225239679 56-57 0.4081346447888129 58-59 0.3930823259016587 60-61 0.4068833820665062 62-63 0.38864715704437375 64-65 0.4356376471999094 66-67 0.45593040303296173 68-69 0.4004907923169 70-71 0.3585920742293647 72-73 0.34572017355137846 74-75 0.3268397340583554 76-77 0.32571235873429694 78-79 0.32598491101044297 80-81 0.3410867848568964 82-83 0.3372091092917283 84-85 0.33675072591821004 86-87 0.3233956643870559 88-89 0.3648855540603723 90-91 0.3451502915194368 92-93 0.3348304712453632 94-95 0.3411487285560205 96-97 0.34077706636127597 98 0.3358587366508231 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 4035923.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.98606896283166 #Duplication Level Percentage of deduplicated Percentage of total 1 70.53988168440902 31.02772100400401 2 11.551841475913129 10.162401916144278 3 5.5170653586813705 7.28022052018225 4 3.3125953198536915 5.828321847401514 5 2.115628856592973 4.65290983929276 6 1.4806639394343868 3.907715169044336 7 1.0364129197173269 3.1911411112459236 8 0.7930590963672003 2.79068416835269 9 0.5987683014034634 2.370371741846128 >10 2.9072452304961303 21.61685502117234 >50 0.10265921523263781 3.0539079990251445 >100 0.04196393686260828 3.3505987141732647 >500 0.0018171610744446304 0.5249637522204238 >1k 3.975039615862882E-4 0.2421871958949458 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.4777479649636527E-5 2 0.0 0.0 0.0 0.0 2.4777479649636527E-5 3 0.0 0.0 0.0 0.0 2.4777479649636527E-5 4 0.0 0.0 0.0 0.0 2.4777479649636527E-5 5 2.4777479649636527E-5 0.0 0.0 2.4777479649636527E-5 2.4777479649636527E-5 6 4.9554959299273054E-5 0.0 0.0 2.4777479649636527E-5 2.4777479649636527E-5 7 7.433243894890957E-5 0.0 0.0 2.4777479649636527E-5 2.4777479649636527E-5 8 7.433243894890957E-5 0.0 0.0 2.4777479649636527E-5 2.4777479649636527E-5 9 7.433243894890957E-5 0.0 0.0 4.9554959299273054E-5 2.4777479649636527E-5 10-11 7.433243894890957E-5 0.0 0.0 4.9554959299273054E-5 2.4777479649636527E-5 12-13 1.4866487789781915E-4 2.4777479649636527E-5 0.0 7.433243894890957E-5 2.4777479649636527E-5 14-15 1.4866487789781915E-4 3.7166219474454794E-5 0.0 7.433243894890957E-5 4.9554959299273054E-5 16-17 1.4866487789781915E-4 6.194369912409131E-5 0.0 8.672117877372783E-5 7.433243894890957E-5 18-19 1.4866487789781915E-4 7.433243894890957E-5 0.0 1.2388739824818263E-4 7.433243894890957E-5 20-21 1.4866487789781915E-4 7.433243894890957E-5 0.0 2.106085770219105E-4 1.2388739824818263E-4 22-23 1.734423575474557E-4 7.433243894890957E-5 0.0 3.9643967439418443E-4 1.2388739824818263E-4 24-25 2.4777479649636526E-4 7.433243894890957E-5 0.0 8.300455682628237E-4 1.2388739824818263E-4 26-27 2.4777479649636526E-4 7.433243894890957E-5 0.0 0.0016477023967008289 1.362761380730009E-4 28-29 3.468847150949114E-4 7.433243894890957E-5 0.0 0.007098747919620865 1.4866487789781915E-4 30-31 3.468847150949114E-4 7.433243894890957E-5 0.0 0.02851887907673164 1.4866487789781915E-4 32-33 3.468847150949114E-4 7.433243894890957E-5 0.0 0.07118569903340574 1.6105361772263742E-4 34-35 3.592734549197296E-4 7.433243894890957E-5 0.0 0.12844645450371575 1.734423575474557E-4 36-37 3.9643967439418443E-4 7.433243894890957E-5 0.0 0.2220805500996922 1.734423575474557E-4 38-39 4.459946336934575E-4 7.433243894890957E-5 0.0 0.3785627228269717 1.9821983719709222E-4 40-41 4.5838337351827575E-4 7.433243894890957E-5 0.0 0.5594135467896686 1.9821983719709222E-4 42-43 4.8316085316791224E-4 7.433243894890957E-5 0.0 0.7441792125370083 2.2299731684672874E-4 44-45 4.955495929927305E-4 7.433243894890957E-5 0.0 0.9700383282832701 2.6016353632118353E-4 46-47 5.203270726423671E-4 7.433243894890957E-5 0.0 1.2307469691567456 3.0971849562045657E-4 48-49 5.698820319416402E-4 7.433243894890957E-5 0.0 1.5174224087030401 3.2210723544527485E-4 50-51 5.698820319416402E-4 7.433243894890957E-5 0.0 1.8263728024543582 3.716621947445479E-4 52-53 5.698820319416402E-4 7.433243894890957E-5 0.0 2.14150517737826 5.203270726423671E-4 54-55 5.946595115912766E-4 7.433243894890957E-5 0.0 2.492713562672033 5.203270726423671E-4 56-57 7.185469098394592E-4 7.433243894890957E-5 2.4777479649636527E-5 2.89820940587816 5.451045522920036E-4 58-59 7.185469098394592E-4 7.433243894890957E-5 2.4777479649636527E-5 3.342110342541223 5.698820319416402E-4 60-61 7.185469098394592E-4 7.433243894890957E-5 2.4777479649636527E-5 3.8155584236864777 5.946595115912766E-4 62-63 7.185469098394592E-4 7.433243894890957E-5 2.4777479649636527E-5 4.297579512790506 6.194369912409131E-4 64-65 7.433243894890958E-4 7.433243894890957E-5 2.4777479649636527E-5 4.80825575710934 6.194369912409131E-4 66-67 7.681018691387323E-4 7.433243894890957E-5 2.4777479649636527E-5 5.387602786277142 6.194369912409131E-4 68-69 7.928793487883689E-4 7.433243894890957E-5 2.4777479649636527E-5 6.027010426115662 6.194369912409131E-4 70-71 8.300455682628237E-4 7.433243894890957E-5 2.4777479649636527E-5 6.709097274650681 6.56603210715368E-4 72-73 8.672117877372784E-4 7.433243894890957E-5 3.7166219474454794E-5 7.401987104312942 7.06158170014641E-4 74-75 8.672117877372784E-4 7.433243894890957E-5 4.9554959299273054E-5 8.113373322533656 7.185469098394592E-4 76-77 8.672117877372784E-4 7.433243894890957E-5 4.9554959299273054E-5 8.874958714524535 7.185469098394592E-4 78-79 8.672117877372784E-4 7.433243894890957E-5 4.9554959299273054E-5 9.71262335777962 7.804906089635506E-4 80-81 8.672117877372784E-4 7.433243894890957E-5 4.9554959299273054E-5 10.578720158932665 8.176568284380054E-4 82-83 9.41544226686188E-4 9.910991859854611E-5 4.9554959299273054E-5 11.465159270878061 8.424343080876419E-4 84-85 9.787104461606428E-4 9.910991859854611E-5 4.9554959299273054E-5 12.362909302283517 8.424343080876419E-4 86 9.91099185985461E-4 9.910991859854611E-5 4.9554959299273054E-5 13.054783255280142 8.424343080876419E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 6185 0.0 43.60743 1 GGTATCA 3335 0.0 42.644714 1 TCAACGC 7780 0.0 33.900227 4 ATCAACG 7820 0.0 33.726826 3 CAACGCA 7880 0.0 33.41181 5 AACGCAG 8370 0.0 31.668728 6 TATCAAC 8560 0.0 30.972324 2 ACGCAGA 9950 0.0 26.175135 7 GTACATG 12835 0.0 26.034145 1 TACATGG 12890 0.0 25.123001 2 CGCAGAG 10480 0.0 24.45641 8 ACATGGG 13805 0.0 22.992386 3 GCAGAGT 11635 0.0 21.004047 9 TAAGGCG 710 0.0 20.673119 5 CATGGGG 9830 0.0 19.224634 4 GTATAGG 875 0.0 18.936384 1 AGAGTAC 9915 0.0 18.543589 10-11 TACCGTA 275 4.2595275E-8 18.341026 7 CAGAGTA 10515 0.0 17.529072 10-11 AGTACAT 9365 0.0 16.652939 2 >>END_MODULE