##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920892_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4035923 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.282036352031493 31.0 30.0 34.0 27.0 34.0 2 30.29126596320098 31.0 30.0 34.0 26.0 34.0 3 30.4282410739749 31.0 30.0 34.0 27.0 34.0 4 34.076014582042326 35.0 35.0 37.0 30.0 37.0 5 33.60346567563355 35.0 35.0 37.0 28.0 37.0 6 33.54695889886898 35.0 35.0 37.0 28.0 37.0 7 33.35898405395742 35.0 35.0 37.0 27.0 37.0 8 33.2898221794618 35.0 33.0 37.0 27.0 37.0 9 34.63109306099249 38.0 35.0 39.0 27.0 39.0 10-11 34.43586337003951 37.5 34.0 39.0 27.0 39.0 12-13 34.25606335898876 37.0 34.0 39.0 26.5 39.0 14-15 35.160589659416196 38.0 34.0 40.0 26.0 41.0 16-17 35.030962805781975 38.0 34.0 40.0 25.5 41.0 18-19 34.932215133935905 38.5 34.0 40.0 25.0 41.0 20-21 34.81100519013866 38.0 34.0 40.0 25.0 41.0 22-23 34.6604412423131 38.0 34.0 40.0 24.5 41.0 24-25 34.48684960045075 38.0 33.0 40.0 24.0 41.0 26-27 34.30045543485344 38.0 33.0 40.0 23.0 41.0 28-29 34.24110606173606 38.0 33.0 40.0 23.5 41.0 30-31 34.23239194603069 38.0 33.0 40.0 23.0 41.0 32-33 34.08566503870366 38.0 33.0 40.0 22.5 41.0 34-35 33.920854287854354 38.0 33.0 40.0 21.5 41.0 36-37 33.724089384262285 38.0 33.0 40.0 19.5 41.0 38-39 33.53819423710512 38.0 32.0 40.0 18.5 41.0 40-41 33.31011629805623 38.0 32.0 40.0 17.5 41.0 42-43 33.34253936460136 38.0 32.0 40.0 17.5 41.0 44-45 33.204684405525086 38.0 32.0 40.0 15.5 41.0 46-47 32.963232326285706 37.5 32.0 40.0 14.5 41.0 48-49 32.70003478758143 37.0 31.0 40.0 12.5 41.0 50-51 32.431362293086366 37.0 31.0 40.0 9.0 41.0 52-53 32.162603696849516 37.0 31.0 40.0 8.0 41.0 54-55 31.86860638817936 36.0 30.5 39.5 7.5 41.0 56-57 31.53195316164357 36.0 30.0 39.0 6.5 41.0 58-59 31.179295913227286 35.5 29.5 39.0 2.0 40.0 60-61 30.83299247780495 35.0 29.0 39.0 2.0 40.0 62-63 30.494930651551083 35.0 29.0 38.5 2.0 40.0 64-65 30.08326769366016 34.5 28.0 38.0 2.0 40.0 66-67 29.63829587432664 34.0 28.0 37.5 2.0 40.0 68-69 29.18271433820715 34.0 28.0 37.0 2.0 39.0 70-71 28.752522904921626 34.0 26.5 36.0 2.0 39.0 72-73 28.310097591059098 34.0 26.0 36.0 2.0 39.0 74-75 27.868882409302657 33.0 26.0 35.0 2.0 38.0 76-77 26.43872962888539 31.5 24.5 34.0 2.0 36.0 78-79 27.28331226834605 33.0 26.0 35.0 2.0 37.0 80-81 27.31679172273604 33.0 26.0 35.0 2.0 36.0 82-83 26.98481784711948 33.0 25.0 35.0 2.0 36.0 84-85 26.67278798430991 33.0 25.0 35.0 2.0 35.5 86-87 26.14215001128614 32.0 24.0 35.0 2.0 35.0 88-89 25.780626761214226 32.0 22.5 35.0 2.0 35.0 90-91 25.422328424006107 32.0 20.0 34.5 2.0 35.0 92-93 25.118337366694064 32.0 19.5 34.0 2.0 35.0 94-95 24.734952079115484 32.0 17.5 34.0 2.0 35.0 96-97 24.197396481548335 31.5 6.0 34.0 2.0 35.0 98-99 23.589388350570616 31.0 2.0 34.0 2.0 35.0 100-101 21.397600623203168 28.0 2.0 33.0 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 94237.0 3 42550.0 4 23360.0 5 16429.0 6 14073.0 7 14290.0 8 15814.0 9 18269.0 10 20746.0 11 23048.0 12 25436.0 13 27763.0 14 29828.0 15 31746.0 16 33073.0 17 34487.0 18 34044.0 19 33553.0 20 33539.0 21 35066.0 22 37862.0 23 43151.0 24 50151.0 25 58897.0 26 69658.0 27 83316.0 28 98075.0 29 115687.0 30 137128.0 31 162151.0 32 194490.0 33 237873.0 34 301477.0 35 392158.0 36 519283.0 37 593749.0 38 319780.0 39 19686.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.017677300519075 18.52929129440736 13.443560979363657 25.009470425709914 2 16.47516565603457 19.88219299525784 37.69098171595444 25.951659632753156 3 19.467909664581374 23.691401482626897 28.639504585041646 28.20118426775008 4 13.943309769193348 16.030405150061867 34.98609420848503 35.040190872259764 5 14.978124863714035 36.62672909720212 33.6330963774695 14.762049661614341 6 34.95004581428125 34.38678068229793 16.455487717456606 14.20768578596421 7 30.490306181443906 30.791961676328146 20.035587259254996 18.682144882972953 8 27.52837686068675 34.18825916304728 19.20931062208668 19.074053354179295 9 27.003143333839525 15.455163077191822 18.636337018587056 38.9053565703816 10-11 26.256221649933998 24.95979160472769 26.93755968312547 21.84642706221284 12-13 26.88349875701231 21.930140408058165 26.95424666685437 24.232114168075157 14-15 23.952794412885904 23.799152744402132 24.112774249820088 28.135278592891876 16-17 24.430428707975 26.716375352855636 24.883125287460345 23.97007065170902 18-19 24.353601364270453 25.974205676863853 26.190875610627952 23.481317348237745 20-21 25.16469061068322 25.16127001328332 25.883511803415786 23.790527572617673 22-23 24.693463180677146 24.937683318546956 25.86068813388461 24.508165366891284 24-25 24.47606028173358 25.32312291451129 25.819859393528294 24.38095741022683 26-27 24.37645255552455 25.48583399234378 25.749186097815542 24.38852735431613 28-29 24.329416535622002 25.530334277912516 25.791423829174608 24.348825357290877 30-31 24.712833758147504 25.36688937759695 25.58758869330515 24.332688170950394 32-33 24.424089346410423 25.375921237072873 25.48978662879746 24.710202787719243 34-35 24.764466453569607 25.370623336160197 25.71967344503003 24.145236765240167 36-37 24.81149228812655 25.127955003755346 25.61665185222636 24.44390085589174 38-39 24.682904195917114 25.1581033129601 25.608628510534253 24.55036398058853 40-41 24.75543553689186 25.12279029514281 25.72219380370604 24.399580364259286 42-43 24.738621820426957 25.07898557970317 25.600732122817917 24.581660477051962 44-45 24.403670952617112 25.15480898609625 25.740177173106744 24.70134288817989 46-47 24.43611356734285 25.0586283754769 25.664710012151374 24.840548045028875 48-49 24.43688363847756 25.160212490007627 25.602466362934877 24.800437508579936 50-51 24.325293806278175 25.252793340391026 25.675350505735366 24.74656234759543 52-53 24.477988880084013 25.014148925994924 25.798138189661024 24.709724004260043 54-55 24.25932391849038 25.014081624106254 25.898082991008824 24.82851146639454 56-57 24.15554664894154 25.13497959772803 25.70292284924372 25.006550904086712 58-59 24.13121651431046 24.94104908044247 25.793376608815286 25.134357796431782 60-61 24.175283026349703 25.023407914824435 25.87135931954716 24.929949739278705 62-63 23.92949412740161 25.166694668000815 25.776690103535554 25.127121101062016 64-65 23.80227646950232 25.032875867118804 25.736631286030576 25.4282163773483 66-67 23.868296333992152 25.14931876238849 25.630400879868652 25.351984023750703 68-69 24.06010711518261 24.921522399116213 25.65422387745255 25.36414660824862 70-71 23.843485383290925 24.802600233332033 25.597378948940186 25.756535434436863 72-73 23.86804186577741 24.8973341521895 25.52296587885845 25.71165810317464 74-75 23.856393079899874 24.969171130265412 25.414408827825923 25.760026962008787 76-77 23.782420559600975 24.815708308475482 25.638240376968408 25.763630754955138 78-79 23.717997995356885 24.798717365654937 25.66620162781782 25.817083011170354 80-81 23.76318017222323 24.84688597521627 25.53056481566841 25.859369036892094 82-83 23.690809991041814 24.982337628224112 25.44663931714582 25.880213063588254 84-85 23.556978366616814 24.87116082937324 25.36198438776412 26.209876416245837 86-87 23.539243147073133 24.741695150532557 25.50260220748874 26.21645949490557 88-89 23.38388848090348 24.754839966735652 25.38944808030017 26.471823472060702 90-91 23.361582036701574 24.742390979892505 25.44681359569933 26.44921338770659 92-93 23.4218997936534 24.67052239868322 25.347896742901483 26.559681064761904 94-95 23.132649202973926 24.63639882077704 25.478557577805873 26.752394398443162 96-97 23.264945115026084 24.48957240627753 25.48921101200679 26.756271466689597 98-99 23.14827892261879 24.468046620906065 25.40033093925198 26.98334351722316 100-101 23.338588893299494 24.384633644603227 25.45928539251674 26.81749206958054 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 85.0 1 63.5 2 64.0 3 97.0 4 94.0 5 88.5 6 147.0 7 325.0 8 516.0 9 543.0 10 445.5 11 377.5 12 391.5 13 439.5 14 498.0 15 528.5 16 591.5 17 697.5 18 765.0 19 841.5 20 969.0 21 1132.5 22 1357.5 23 1694.5 24 2050.0 25 2450.0 26 3227.5 27 4278.0 28 5590.5 29 7613.0 30 10547.0 31 14830.5 32 20559.5 33 26621.5 34 33265.0 35 41582.5 36 51617.5 37 62173.0 38 72479.0 39 83416.5 40 94488.0 41 104517.5 42 114566.5 43 127304.5 44 139070.5 45 148290.5 46 158589.5 47 168344.5 48 176854.0 49 185915.5 50 189311.0 51 188556.0 52 189505.0 53 190160.5 54 186541.5 55 176970.0 56 163857.0 57 149131.0 58 135914.5 59 121329.0 60 103354.0 61 84839.0 62 68102.0 63 51845.0 64 38550.5 65 30174.5 66 23099.0 67 16782.0 68 12488.5 69 9713.0 70 7711.0 71 6046.5 72 4723.0 73 4321.5 74 3463.0 75 2393.5 76 1676.5 77 1066.5 78 626.0 79 322.0 80 175.0 81 101.0 82 53.5 83 28.0 84 13.5 85 8.5 86 4.5 87 1.5 88 1.5 89 3.0 90 3.0 91 3.0 92 2.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.18813540297969014 2 0.0 3 0.01283473445851172 4 0.013726723725898636 5 0.007210246578044229 6 0.10973945736824017 7 0.14442792887773132 8 0.12601826149805137 9 0.1438828243254393 10-11 0.11738330984015304 12-13 0.1166647629303136 14-15 0.11868412752175897 16-17 0.06833628887369754 18-19 0.08155507426677863 20-21 0.038157318660440254 22-23 0.08660968011530447 24-25 0.05936684124052912 26-27 0.0676301307036829 28-29 0.041502278413141185 30-31 0.02531019546210371 32-33 0.033065546592439946 34-35 0.020540530629548682 36-37 0.024988088226658434 38-39 0.03217355732505303 40-41 0.024653592251388346 42-43 0.013243562872730723 44-45 0.02755255737039582 46-47 0.03470086024931596 48-49 0.008548230479124602 50-51 0.015139040065927919 52-53 0.006962471781547864 54-55 0.012933844377110267 56-57 0.005463434262744854 58-59 0.003729010687270297 60-61 0.023860712902599977 62-63 0.009935769339504248 64-65 0.007135914139095319 66-67 0.04173766446981273 68-69 0.09220939051612233 70-71 0.02231212042449769 72-73 0.04560295129515603 74-75 0.08876532084482286 76-77 0.2402672201625254 78-79 0.08139402064905599 80-81 0.017220348356497384 82-83 0.012586959662015356 84-85 0.013937332302920546 86-87 0.2576486221367454 88-89 0.6199944845330301 90-91 0.2671631743222058 92-93 0.3541073504127804 94-95 0.0011149865842336436 96-97 0.004075895402365209 98-99 0.003394514712000204 100-101 0.004881163490978396 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4035923.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.62258142551581 #Duplication Level Percentage of deduplicated Percentage of total 1 67.2398833829178 27.314576377647658 2 12.48811184698047 10.145986807098256 3 6.143678794287336 7.487162762194564 4 3.7489304981950284 6.091649376861085 5 2.368865002443087 4.811470572389951 6 1.650279483990795 4.022316762796458 7 1.208229352980351 3.4356976690499814 8 0.8827862669504071 2.8688845608416043 9 0.6918816290675155 2.5295416032252307 >10 3.40419356247123 23.299958844796524 >50 0.11935241967977177 3.267389877872358 >100 0.050806867270882634 3.730230015960015 >500 0.0023884656926485993 0.6280046834632457 >1k 6.124270726340146E-4 0.3671300858030412 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 4.9554959299273054E-5 0.0 0.0 0.0 0.0 3 4.9554959299273054E-5 0.0 0.0 0.0 0.0 4 4.9554959299273054E-5 0.0 0.0 0.0 0.0 5 7.433243894890957E-5 0.0 0.0 2.4777479649636527E-5 0.0 6 9.910991859854611E-5 0.0 0.0 2.4777479649636527E-5 0.0 7 9.910991859854611E-5 0.0 0.0 2.4777479649636527E-5 0.0 8 9.910991859854611E-5 0.0 0.0 2.4777479649636527E-5 0.0 9 9.910991859854611E-5 0.0 0.0 4.9554959299273054E-5 2.4777479649636527E-5 10-11 9.910991859854611E-5 0.0 0.0 4.9554959299273054E-5 2.4777479649636527E-5 12-13 9.910991859854611E-5 0.0 0.0 7.433243894890957E-5 6.194369912409131E-5 14-15 1.2388739824818263E-4 0.0 0.0 7.433243894890957E-5 7.433243894890957E-5 16-17 1.2388739824818263E-4 0.0 0.0 7.433243894890957E-5 9.910991859854611E-5 18-19 1.6105361772263742E-4 0.0 0.0 1.1149865842336436E-4 9.910991859854611E-5 20-21 1.9821983719709222E-4 0.0 0.0 2.35386056671547E-4 1.1149865842336437E-4 22-23 1.9821983719709222E-4 0.0 0.0 4.21217154043821E-4 1.4866487789781915E-4 24-25 2.4777479649636526E-4 0.0 0.0 8.548230479124602E-4 1.4866487789781915E-4 26-27 2.4777479649636526E-4 0.0 0.0 0.0016724798763504654 1.4866487789781915E-4 28-29 3.0971849562045657E-4 0.0 0.0 0.007247412797518684 1.4866487789781915E-4 30-31 3.716621947445479E-4 0.0 0.0 0.028940096230775463 1.4866487789781915E-4 32-33 3.716621947445479E-4 0.0 0.0 0.07178035854499701 1.9821983719709222E-4 34-35 3.8405093456936616E-4 0.0 0.0 0.12884289417810993 3.2210723544527485E-4 36-37 4.459946336934575E-4 0.0 0.0 0.22247698977408636 3.2210723544527485E-4 38-39 4.70772113343094E-4 0.0 0.0 0.37990070672805204 3.716621947445479E-4 40-41 4.70772113343094E-4 0.0 0.0 0.5618293510555082 3.716621947445479E-4 42-43 4.8316085316791224E-4 0.0 0.0 0.7478586682649793 3.716621947445479E-4 44-45 4.955495929927305E-4 0.0 0.0 0.9759601459195331 3.8405093456936616E-4 46-47 5.574932921168219E-4 1.2388739824818264E-5 0.0 1.2384775428074322 3.9643967439418443E-4 48-49 6.194369912409131E-4 2.4777479649636527E-5 0.0 1.5240875507287925 4.088284142190027E-4 50-51 6.194369912409131E-4 2.4777479649636527E-5 0.0 1.8291478801751173 4.459946336934575E-4 52-53 6.318257310657314E-4 2.4777479649636527E-5 0.0 2.141121126443691 5.574932921168219E-4 54-55 6.442144708905497E-4 2.4777479649636527E-5 0.0 2.4884022812129967 5.698820319416402E-4 56-57 7.185469098394592E-4 2.4777479649636527E-5 0.0 2.8906398858451956 5.946595115912766E-4 58-59 7.185469098394592E-4 2.4777479649636527E-5 0.0 3.3300684874314994 5.946595115912766E-4 60-61 7.185469098394592E-4 2.4777479649636527E-5 0.0 3.800605214717922 5.946595115912766E-4 62-63 7.433243894890958E-4 2.4777479649636527E-5 0.0 4.279442397686973 6.194369912409131E-4 64-65 7.433243894890958E-4 2.4777479649636527E-5 0.0 4.784432210426215 6.194369912409131E-4 66-67 8.176568284380054E-4 2.4777479649636527E-5 0.0 5.3580308643153005 6.442144708905497E-4 68-69 8.176568284380054E-4 2.4777479649636527E-5 0.0 5.987069128920448 6.937694301898227E-4 70-71 8.300455682628237E-4 2.4777479649636527E-5 0.0 6.661239572707408 7.433243894890958E-4 72-73 8.91989267386915E-4 2.4777479649636527E-5 0.0 7.347104986888997 8.052680886131871E-4 74-75 9.41544226686188E-4 2.4777479649636527E-5 0.0 8.056186899502295 9.043780072117332E-4 76-77 9.41544226686188E-4 2.4777479649636527E-5 0.0 8.817437795517902 9.41544226686188E-4 78-79 9.663217063358246E-4 2.4777479649636527E-5 0.0 9.650233664021837 9.91099185985461E-4 80-81 0.0010902091045840072 2.4777479649636527E-5 0.0 10.512279347252164 0.0010158766656350976 82-83 0.0010902091045840072 2.4777479649636527E-5 0.0 11.393688630828684 0.0010406541452847341 84-85 0.0011149865842336438 2.4777479649636527E-5 0.0 12.288366254757587 0.0010406541452847341 86-87 0.0011397640638832803 2.4777479649636527E-5 0.0 13.215304157190314 0.0010406541452847341 88-89 0.0011397640638832803 2.4777479649636527E-5 0.0 14.196678182413292 0.0010530428851095524 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3410 0.0 44.485523 1 GTATCAA 6020 0.0 41.392075 1 TCAACGC 7480 0.0 31.736195 4 ATCAACG 7530 0.0 31.714617 3 CAACGCA 7710 0.0 30.723307 5 TATCAAC 8250 0.0 29.405355 2 AACGCAG 8205 0.0 28.870157 6 GTACATG 13035 0.0 27.178635 1 TACATGG 13265 0.0 26.5556 2 ACATGGG 13810 0.0 24.821611 3 ACGCAGA 9975 0.0 23.41333 7 CGCAGAG 10460 0.0 22.099443 8 CATGGGG 9860 0.0 20.849585 4 GTATAGG 865 0.0 18.691545 1 AGTACAT 9350 0.0 18.380465 2 GCAGAGT 11980 0.0 18.265356 9 GAGTACA 10255 0.0 18.038328 1 GTATAGA 1065 0.0 16.967442 1 AGAGTAC 10150 0.0 16.71682 10-11 GTGGTAT 2165 0.0 16.473495 1 >>END_MODULE