##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920891_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3784021 Sequences flagged as poor quality 0 Sequence length 98 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.9042568738387 31.0 30.0 33.0 23.0 34.0 2 28.930459159713966 31.0 30.0 34.0 22.0 34.0 3 29.003030110033745 31.0 30.0 34.0 23.0 34.0 4 32.50961794345222 35.0 33.0 37.0 25.0 37.0 5 32.48221455430612 35.0 33.0 37.0 25.0 37.0 6 32.60872600865587 35.0 33.0 37.0 25.0 37.0 7 32.454005144263206 35.0 33.0 37.0 25.0 37.0 8 32.40246367554514 35.0 33.0 37.0 25.0 37.0 9 33.70108384705053 37.0 33.0 39.0 25.0 39.0 10-11 33.50737139143784 37.0 33.0 39.0 23.0 39.0 12-13 33.344030860293856 37.0 33.0 39.0 22.0 39.0 14-15 34.138722010263685 38.0 33.0 40.0 21.5 41.0 16-17 34.03432975134123 38.0 33.0 40.0 20.0 41.0 18-19 33.92169810896927 38.0 33.0 40.0 19.0 41.0 20-21 33.83199313640172 38.0 33.0 40.0 18.0 41.0 22-23 33.6123513849421 38.0 32.0 40.0 18.0 41.0 24-25 33.425324542332085 38.0 32.0 40.0 17.5 41.0 26-27 33.471309752245034 38.0 32.0 40.0 17.0 41.0 28-29 33.31729805410699 38.0 32.0 40.0 16.0 41.0 30-31 33.07454570151698 38.0 32.0 40.0 15.5 41.0 32-33 32.84813601721555 38.0 31.5 40.0 12.0 41.0 34-35 32.52136431061032 37.5 31.0 40.0 9.0 41.0 36-37 32.22063804614192 37.0 30.0 40.0 8.5 41.0 38-39 32.02434856994715 37.0 30.0 40.0 8.0 41.0 40-41 31.83170495089747 37.0 30.0 40.0 6.5 41.0 42-43 31.604291968781357 37.0 30.0 40.0 2.0 41.0 44-45 31.328852165461026 36.5 30.0 40.0 2.0 41.0 46-47 31.07919366726559 36.0 29.5 39.0 2.0 40.5 48-49 30.78689454947528 36.0 29.0 39.0 2.0 40.0 50-51 29.627943660989196 34.5 27.0 38.0 2.0 39.5 52-53 30.092317405215248 35.0 28.0 38.5 2.0 39.5 54-55 30.758977553242964 36.0 29.0 39.0 2.0 40.0 56-57 30.711248695501425 36.0 29.0 39.0 2.0 41.0 58-59 30.472431971175638 35.5 28.5 39.0 2.0 41.0 60-61 30.154325385614932 35.0 28.0 39.0 2.0 40.0 62-63 29.765322919719527 35.0 28.0 39.0 2.0 40.0 64-65 29.34542686206023 34.5 27.5 38.0 2.0 40.0 66-67 28.964600883557466 34.0 26.5 38.0 2.0 40.0 68-69 28.520701259321765 34.0 26.0 37.0 2.0 40.0 70-71 28.19272448540851 34.0 26.0 37.0 2.0 39.0 72-73 27.729815849330645 34.0 26.0 36.0 2.0 39.0 74-75 27.281442016310166 33.0 25.0 36.0 2.0 39.0 76-77 26.862976315406286 33.0 24.0 35.0 2.0 37.5 78-79 26.39591363261462 33.0 23.0 35.0 2.0 37.0 80-81 25.93816881565932 32.0 21.5 35.0 2.0 36.5 82-83 25.467841748235543 32.0 20.0 35.0 2.0 36.0 84-85 25.0668361777062 32.0 18.5 35.0 2.0 35.5 86-87 24.6019307239574 31.5 14.5 34.0 2.0 35.0 88-89 24.070220540530826 31.0 7.0 34.0 2.0 35.0 90-91 23.569296391325523 31.0 2.0 34.0 2.0 35.0 92-93 23.02833322013805 31.0 2.0 34.0 2.0 35.0 94-95 22.39033543947034 30.0 2.0 34.0 2.0 35.0 96-97 21.74147487553584 30.0 2.0 34.0 2.0 35.0 98 21.340942082509585 29.0 2.0 34.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 168895.0 3 29179.0 4 21553.0 5 18172.0 6 16444.0 7 16969.0 8 19603.0 9 22930.0 10 24878.0 11 26857.0 12 28422.0 13 28677.0 14 26809.0 15 28023.0 16 30115.0 17 32283.0 18 33227.0 19 33362.0 20 35065.0 21 37335.0 22 40203.0 23 45108.0 24 52177.0 25 59906.0 26 68765.0 27 80328.0 28 93308.0 29 108584.0 30 126372.0 31 148662.0 32 177696.0 33 217139.0 34 270011.0 35 345587.0 36 442497.0 37 494506.0 38 303811.0 39 30563.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.720575801200276 17.51108880913457 12.391512141198387 25.376823248466767 2 16.420356473539385 19.50055112511465 38.55631652820254 25.522775873143424 3 19.286316170088146 23.25258315632999 28.909412701315972 28.551687972265892 4 13.383477963005252 15.270350705809715 35.930773345850994 35.415397985334046 5 14.694538249592416 36.563690112432255 34.01414020092746 14.727631437047876 6 34.43004013792538 34.34315613348999 17.03605805130835 14.19074567727628 7 30.110458686886414 31.05352827120737 20.551310216794203 18.284702825112014 8 27.09260491138268 33.88915890384675 19.963311442300093 19.05492474247048 9 27.272470210921135 15.315850519857053 19.04186049707441 38.369818772147404 10-11 26.02632570304521 25.0074887279284 27.483770238559753 21.48241533046663 12-13 26.661724587438794 22.273343230705905 27.35793669513648 23.706995486718824 14-15 23.505057919471025 23.78653868642749 24.812089587048344 27.89631380705314 16-17 24.17684355409178 26.969868273297426 25.275825825706775 23.577462346904014 18-19 24.001636929467164 26.086078380158895 26.626447514098423 23.28583717627552 20-21 24.666569696328573 25.537530826650094 26.380167802762333 23.415731674259003 22-23 24.426225280302603 25.286941915943935 26.25321302336654 24.03361978038692 24-25 24.27110349087617 25.438937696470198 26.313203643609935 23.976755169043702 26-27 23.92153502628603 25.804180297597583 26.149503825519854 24.124780850596533 28-29 24.100114515856518 25.96540621664306 26.247703270933513 23.686775996566904 30-31 24.101476337941588 25.63710575629683 26.08962465256318 24.171793253198402 32-33 23.98845095614501 25.69321289489046 26.059317637957008 24.259018511007525 34-35 24.549527278357136 25.692009714500674 25.848885486121365 23.90957752102082 36-37 24.473835435353777 25.32249952333431 25.977894927480428 24.225770113831484 38-39 24.202719843053004 25.53771692922932 26.19013207166294 24.069431156054737 40-41 24.335728770437555 25.40326937212754 26.1854918326753 24.075510024759605 42-43 24.33449856034829 25.297485786897056 26.01256874381682 24.355446908937832 44-45 24.215914694786946 25.495415961594937 26.013718292993815 24.274951050624306 46-47 24.112439495212275 25.47456152846494 25.88160519165365 24.531393784669138 48-49 24.27329205397015 25.454061501016955 25.849768864566414 24.422877580446485 50-51 23.999265827673206 25.57312122967499 26.061817946481806 24.36579499617 52-53 24.170255261876004 25.425207563073048 26.0252757942624 24.379261380788556 54-55 23.826161749820727 25.221506205039933 26.29851759496782 24.65381445017152 56-57 23.832554220310143 25.511241102570843 26.263163989948364 24.393040687170657 58-59 23.782717586023306 25.105679656477122 26.31959968665501 24.792003070844565 60-61 23.829657455315257 25.073110964568592 26.49965860545735 24.597572974658803 62-63 23.684305463743925 25.203896974796514 26.503357210841116 24.60844035061844 64-65 23.510593337008974 25.140055771515925 26.382846311191262 24.966504580283846 66-67 23.618882237256155 25.21696406127524 26.27800757512816 24.88614612634044 68-69 23.49696078629043 24.907757104851814 26.511409254957556 25.083872853900203 70-71 23.346451112372545 24.811232202722127 26.577325747218154 25.26499093768717 72-73 23.522740711396633 24.74615136998978 26.599298074796717 25.13180984381687 74-75 23.381200886910435 24.8513741027402 26.535811984743784 25.231613025605583 76-77 23.29722369726018 24.77022325638363 26.62565604577481 25.306897000581387 78-79 23.249322517652185 24.79006132998096 26.57817199859811 25.38244415376874 80-81 23.1419717046118 24.8009544218239 26.756954398490997 25.300119475073302 82-83 23.187814427170352 24.67580088823418 26.608076777200797 25.528307907394677 84-85 23.036352360905667 24.55062973480957 26.705631753810717 25.707386150474047 86-87 23.24933309915863 24.45392336522307 26.84820508402122 25.44853845159708 88-89 22.967952492901397 24.226440284021013 26.94655133158553 25.859055891492062 90-91 22.94302578667858 24.36139187953162 26.997307195188775 25.69827513860103 92-93 23.093388685460337 24.06759654917066 27.071787463103814 25.767227302265194 94-95 22.885203834409324 23.92784478137962 27.141582728586293 26.045368655624763 96-97 23.095868926700476 23.713968862335783 27.18095229256969 26.00920991839405 98 22.978118337713767 23.599377150391454 27.070202086752992 26.352302425141787 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 120.0 1 88.0 2 116.5 3 191.5 4 178.5 5 200.5 6 360.0 7 620.0 8 921.0 9 1131.5 10 1127.5 11 1131.0 12 1295.5 13 1482.0 14 1641.0 15 1782.0 16 1886.0 17 1966.0 18 2052.0 19 2106.0 20 2142.0 21 2239.5 22 2434.5 23 2770.0 24 3270.0 25 4026.0 26 5191.5 27 6836.0 28 9254.5 29 12972.5 30 17975.0 31 24915.0 32 32374.0 33 40360.0 34 49335.5 35 58791.0 36 69734.5 37 80523.0 38 88453.0 39 96806.0 40 108659.5 41 120178.5 42 130503.5 43 139080.5 44 144767.0 45 148708.5 46 153460.5 47 162825.5 48 168745.5 49 168643.0 50 168870.0 51 168162.5 52 167453.0 53 165150.0 54 159303.0 55 151228.0 56 138570.5 57 124373.5 58 111839.0 59 95897.0 60 80504.5 61 68869.5 62 59250.5 63 47965.0 64 35964.0 65 27934.0 66 22945.5 67 18968.5 68 13903.0 69 10453.5 70 9014.5 71 8855.0 72 7723.0 73 5175.5 74 3310.5 75 1903.5 76 1132.5 77 684.0 78 438.5 79 274.0 80 157.5 81 82.0 82 54.0 83 37.5 84 27.5 85 24.5 86 19.0 87 12.0 88 9.5 89 9.0 90 6.0 91 4.5 92 4.0 93 3.0 94 5.5 95 5.5 96 2.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.3581639742485573 2 0.022489304366968367 3 0.017573898242108064 4 0.014931206777129408 5 0.020216589707086723 6 0.021564362354225836 7 0.013874130191137944 8 0.0073995361019402375 9 0.0 10-11 1.3213457324893282E-5 12-13 0.0049814734114847666 14-15 0.0027351856662529094 16-17 0.005338236759256885 18-19 0.035121369569566345 20-21 0.07388965336080323 22-23 0.09271883004877615 24-25 0.060174084657564 26-27 0.06975384121811164 28-29 0.05317095227537057 30-31 0.049114420876628324 32-33 0.017904234675230394 34-35 0.31522023794265414 36-37 0.4830575728834486 38-39 0.43959851174187453 40-41 0.449204695217072 42-43 0.4024158428296249 44-45 0.37816914863844575 46-47 0.37732348736965254 48-49 0.3683119094740753 50-51 0.3644007261059069 52-53 0.4214960752067708 54-55 0.4216414232373446 56-57 0.3933514111047481 58-59 0.37986047117603206 60-61 0.3943292069467902 62-63 0.37592286089321386 64-65 0.42199818658511673 66-67 0.4411180593342373 68-69 0.3864936267531285 70-71 0.34842565620011096 72-73 0.3350668508446438 74-75 0.318457534987253 76-77 0.31685870665094085 78-79 0.3162508876139958 80-81 0.33094425215927714 82-83 0.3271784168216825 84-85 0.32647810358346324 86-87 0.3147049131069833 88-89 0.35371103913006824 90-91 0.3349479297287198 92-93 0.3247867810458768 94-95 0.3314067231656484 96-97 0.33148600390959776 98 0.32568529614396957 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 3784021.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.19076810645069 #Duplication Level Percentage of deduplicated Percentage of total 1 73.29939209738687 35.32354006908975 2 12.421349030703439 11.97188701415831 3 5.277476610077036 7.629769545103199 4 2.8246140198451277 5.444812768823443 5 1.6531789551735572 3.9833981833616665 6 1.0523848156675202 3.0429139566349996 7 0.7203454757762207 2.4299801245763915 8 0.49586694848465185 1.9116967300861751 9 0.36707455041240206 1.5920644083033337 >10 1.6911008069602596 14.15807386052251 >50 0.11527229806616837 3.834437356022126 >100 0.07724012425711986 6.888611890004423 >500 0.003874102401996997 1.2361406875859224 >1k 8.301647875326645E-4 0.5526734057277967 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 0.0 0.0 12-13 0.0 0.0 0.0 0.0 0.0 14-15 3.9640371974679845E-5 0.0 0.0 0.0 0.0 16-17 7.928074394935969E-5 0.0 0.0 0.0 0.0 18-19 7.928074394935969E-5 0.0 0.0 1.3213457324893282E-5 0.0 20-21 1.0570765859914626E-4 0.0 0.0 1.1892111592403954E-4 0.0 22-23 1.0570765859914626E-4 0.0 0.0 2.642691464978656E-4 0.0 24-25 1.0570765859914626E-4 0.0 0.0 9.249420127425297E-4 0.0 26-27 1.0570765859914626E-4 0.0 0.0 0.0020216589707086723 0.0 28-29 1.0570765859914626E-4 0.0 0.0 0.007862007108311503 0.0 30-31 1.0570765859914626E-4 2.6426914649786564E-5 0.0 0.029571717493111164 0.0 32-33 1.0570765859914626E-4 2.6426914649786564E-5 0.0 0.07555454898373978 0.0 34-35 1.7177494522361268E-4 2.6426914649786564E-5 0.0 0.13748602346551458 0.0 36-37 2.1141531719829252E-4 2.6426914649786564E-5 0.0 0.23636232462769102 0.0 38-39 2.1141531719829252E-4 2.6426914649786564E-5 0.0 0.40073773374936345 0.0 40-41 2.1141531719829252E-4 2.6426914649786564E-5 0.0 0.589861948440561 0.0 42-43 2.1141531719829252E-4 2.6426914649786564E-5 0.0 0.7862271377458001 0.0 44-45 2.1141531719829252E-4 2.6426914649786564E-5 0.0 1.0266988476015328 0.0 46-47 3.435498904472253E-4 2.6426914649786564E-5 0.0 1.3229181339109903 0.0 48-49 4.756844636961581E-4 2.6426914649786564E-5 0.0 1.6366981050052312 0.0 50-51 4.756844636961581E-4 2.6426914649786564E-5 0.0 1.9805783318855787 0.0 52-53 4.756844636961581E-4 2.6426914649786564E-5 0.0 2.328858640055116 0.0 54-55 5.021113783459447E-4 2.6426914649786564E-5 0.0 2.7195409327802356 0.0 56-57 5.021113783459447E-4 2.6426914649786564E-5 0.0 3.180703806876336 0.0 58-59 5.021113783459447E-4 3.9640371974679845E-5 0.0 3.6698659970438854 0.0 60-61 5.021113783459447E-4 5.285382929957313E-5 0.0 4.195999440806486 0.0 62-63 5.021113783459447E-4 5.285382929957313E-5 0.0 4.7270747176085965 0.0 64-65 5.021113783459447E-4 5.285382929957313E-5 0.0 5.294804125029962 0.0 66-67 5.285382929957312E-4 5.285382929957313E-5 0.0 5.943333823993049 0.0 68-69 5.549652076455178E-4 5.285382929957313E-5 0.0 6.647333616806038 0.0 70-71 5.549652076455178E-4 5.285382929957313E-5 0.0 7.402073085746617 0.0 72-73 5.549652076455178E-4 5.285382929957313E-5 0.0 8.153786672959797 0.0 74-75 5.549652076455178E-4 5.285382929957313E-5 0.0 8.934768068147614 0.0 76-77 5.681786649704111E-4 5.285382929957313E-5 0.0 9.789943026214706 0.0 78-79 5.813921222953044E-4 5.285382929957313E-5 0.0 10.706217010952106 0.0 80-81 5.813921222953044E-4 5.285382929957313E-5 0.0 11.669266634619628 0.0 82-83 5.813921222953044E-4 5.285382929957313E-5 0.0 12.634192569227285 0.0 84-85 6.474594089197708E-4 5.285382929957313E-5 0.0 13.607905452955997 0.0 86 6.870997808944506E-4 5.285382929957313E-5 0.0 14.355655002971707 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3125 0.0 42.41159 1 GTATCAA 5405 0.0 41.379253 1 TCAACGC 6745 0.0 32.647076 4 ATCAACG 6835 0.0 32.485672 3 CAACGCA 6830 0.0 31.972107 5 AACGCAG 7195 0.0 30.408705 6 TATCAAC 7340 0.0 30.125618 2 GTACATG 11095 0.0 27.790066 1 TACATGG 11385 0.0 26.35298 2 ACGCAGA 8530 0.0 25.593409 7 ACATGGG 11760 0.0 25.47363 3 CGCAGAG 9210 0.0 23.403131 8 CATGGGG 8015 0.0 21.235151 4 GCAGAGT 10225 0.0 20.363174 9 GAGTACA 8215 0.0 19.830688 1 CATGGGA 4370 0.0 18.47635 4 AGTACAT 8440 0.0 18.045988 2 AGAGTAC 8640 0.0 17.942095 10-11 GCACCGT 835 0.0 17.578178 6 TAAGGCG 1000 0.0 17.432858 5 >>END_MODULE