##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920891_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3784021 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.32069589465809 31.0 30.0 34.0 27.0 34.0 2 30.32739987436645 31.0 30.0 34.0 26.0 34.0 3 30.464310848169184 31.0 30.0 34.0 27.0 34.0 4 34.120330463282315 35.0 35.0 37.0 30.0 37.0 5 33.65816918035075 35.0 35.0 37.0 28.0 37.0 6 33.60567000024577 35.0 35.0 37.0 28.0 37.0 7 33.42138851766415 35.0 35.0 37.0 28.0 37.0 8 33.35704928698863 35.0 35.0 37.0 27.0 37.0 9 34.702339918303835 38.0 35.0 39.0 27.0 39.0 10-11 34.505898619484405 38.0 34.0 39.0 27.0 39.0 12-13 34.32731557250871 37.0 34.0 39.0 27.0 39.0 14-15 35.24150724850629 38.0 34.0 40.0 27.0 41.0 16-17 35.12121721840339 38.0 34.0 40.0 26.0 41.0 18-19 35.02260188302338 38.5 34.0 40.0 25.5 41.0 20-21 34.907755268800045 38.0 34.0 40.0 25.0 41.0 22-23 34.757454702286275 38.0 34.0 40.0 25.0 41.0 24-25 34.576239666746034 38.0 33.5 40.0 24.0 41.0 26-27 34.40704927377517 38.0 33.0 40.0 24.0 41.0 28-29 34.345141451382005 38.0 33.0 40.0 23.5 41.0 30-31 34.33590326269331 38.0 33.0 40.0 24.0 41.0 32-33 34.19221523876321 38.0 33.0 40.0 23.0 41.0 34-35 34.012664702442194 38.0 33.0 40.0 22.5 41.0 36-37 33.822052916725355 38.0 33.0 40.0 20.5 41.0 38-39 33.63687661881369 38.0 33.0 40.0 19.0 41.0 40-41 33.409048205599284 38.0 32.0 40.0 18.0 41.0 42-43 33.43981838367176 38.0 32.0 40.0 18.0 41.0 44-45 33.29844073275492 38.0 32.0 40.0 16.5 41.0 46-47 33.05375102305193 38.0 32.0 40.0 15.0 41.0 48-49 32.79527373130328 37.0 31.0 40.0 13.5 41.0 50-51 32.53330491559112 37.0 31.0 40.0 10.5 41.0 52-53 32.270085181873995 37.0 31.0 40.0 8.5 41.0 54-55 31.987603662876076 36.5 30.5 40.0 8.0 41.0 56-57 31.658005729883634 36.0 30.0 39.0 7.0 41.0 58-59 31.330818592180115 36.0 30.0 39.0 3.5 40.5 60-61 30.990844131150435 35.0 29.0 39.0 2.0 40.0 62-63 30.66572106761564 35.0 29.0 39.0 2.0 40.0 64-65 30.25627606189289 35.0 28.0 38.0 2.0 40.0 66-67 29.820897399882295 34.0 28.0 38.0 2.0 40.0 68-69 29.383528262660278 34.0 28.0 37.0 2.0 39.5 70-71 28.959366240303638 34.0 27.0 36.5 2.0 39.0 72-73 28.51735481911966 34.0 26.0 36.0 2.0 39.0 74-75 28.077010407711796 33.0 26.0 36.0 2.0 38.5 76-77 26.632080530208473 31.5 24.5 34.5 2.0 36.0 78-79 27.48453351606664 33.0 26.0 35.0 2.0 37.0 80-81 27.514262737971066 33.0 26.0 35.0 2.0 36.5 82-83 27.182529510274918 33.0 26.0 35.0 2.0 36.0 84-85 26.869102867029543 33.0 25.0 35.0 2.0 36.0 86-87 26.329011519756364 32.5 24.0 35.0 2.0 35.0 88-89 25.97259489310445 32.0 23.5 35.0 2.0 35.0 90-91 25.61569848581707 32.0 21.5 35.0 2.0 35.0 92-93 25.3071371696933 32.0 20.0 34.0 2.0 35.0 94-95 24.92728700501398 32.0 18.5 34.0 2.0 35.0 96-97 24.399773944172086 32.0 11.5 34.0 2.0 35.0 98-99 23.80093186586438 31.5 2.0 34.0 2.0 35.0 100-101 21.60821966897118 28.0 2.0 33.0 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 83489.0 3 38389.0 4 20652.0 5 14807.0 6 12629.0 7 12649.0 8 14259.0 9 16712.0 10 18982.0 11 21145.0 12 23713.0 13 25670.0 14 27905.0 15 29708.0 16 31440.0 17 32631.0 18 31719.0 19 30738.0 20 30920.0 21 32350.0 22 35161.0 23 39980.0 24 46934.0 25 55250.0 26 64992.0 27 77991.0 28 91889.0 29 108345.0 30 127796.0 31 151122.0 32 181620.0 33 221510.0 34 278874.0 35 361766.0 36 482119.0 37 562086.0 38 324364.0 39 21714.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.76944045618562 18.832086022484688 13.137020099500695 25.261453421828996 2 16.46050590099791 20.599727115679325 37.46752462525975 25.472242358063024 3 19.032463197222924 24.15821031381672 29.376066790254434 27.433259698705925 4 13.711511568499807 16.337725818929368 35.50346279258899 34.44729981998183 5 14.621476649128537 36.87124645458111 34.08385741575302 14.423419480537328 6 34.27073362889499 34.93535051781492 16.760425215123487 14.033490638166606 7 29.827796650360618 31.30502763489545 20.62589518323931 18.24128053150463 8 27.055215616751887 34.210715018092095 19.933479304893133 18.80059006026288 9 27.010975755312614 15.295555153878379 18.911655398386866 38.78181369242214 10-11 25.965698762018114 25.165520862395148 27.553963525021235 21.314816850565506 12-13 26.581614699773787 22.357969653274772 27.467291945021366 23.59312370193007 14-15 23.420572769908336 23.95652923935297 24.772885899505713 27.850012091232983 16-17 24.128668638364758 27.17481790352642 25.258163930195117 23.4383495279137 18-19 24.020842152118036 26.177842505067783 26.636161440722628 23.165153902091554 20-21 24.605581076510035 25.601543797073006 26.363343517187747 23.42953160922921 22-23 24.295433602515423 25.462305162138744 26.32840990722687 23.913851328118966 24-25 24.23062969585334 25.57923567492042 26.35082714711589 23.839307482110343 26-27 23.83885778417619 25.9370111056694 26.219809535495514 24.004321574658892 28-29 23.985066496338465 26.000478783683235 26.308423142727104 23.706031577251192 30-31 23.984736938725586 25.701415009117472 26.183450936865476 24.130397115291462 32-33 23.87303395810932 25.800126757203117 26.109089178781186 24.217750105906372 34-35 24.433654242001126 25.785779091750715 25.96492317817865 23.815643488069508 36-37 24.388683378333603 25.415651688002423 26.017838953531943 24.177825980132038 38-39 24.134242420317207 25.617254007105238 26.234237053982945 24.014266518594614 40-41 24.257538215950603 25.426997387177387 26.284421912500513 24.031042484371504 42-43 24.27410444237496 25.410021618582864 26.087044430885754 24.228829508156426 44-45 24.118903531443767 25.51068272676219 26.078446481423008 24.291967260371035 46-47 24.083156488769074 25.45829453327244 25.974162959594842 24.484386018363637 48-49 24.200642311443747 25.46416139743374 25.9302686525824 24.404927638540112 50-51 23.93650924546746 25.535685235308474 26.14314692006512 24.384658599158943 52-53 24.121827362871603 25.448186013961433 26.04519474636544 24.384791876801522 54-55 23.819518173487886 25.263528194735063 26.214774917068866 24.702178714708182 56-57 23.76489489006958 25.61639632458809 26.09515498508397 24.52355380025836 58-59 23.684856272282886 25.312223043397196 26.19782347374985 24.805097210570068 60-61 23.76647713808449 25.365220621869266 26.267429715144104 24.600872524902144 62-63 23.542607119070524 25.52095336765654 26.196585827404302 24.739853685868635 64-65 23.29476627123502 25.4203396598961 26.066879849926877 25.218014218942002 66-67 23.49697788150842 25.427435051286917 25.99321973135902 25.08236733584564 68-69 23.335195489350266 25.137439810567948 26.225333045545586 25.3020316545362 70-71 23.19984806519029 24.97553989656644 26.191560243354733 25.633051794888534 72-73 23.326740322259965 24.943354392896573 26.185287846932866 25.5446174379106 74-75 23.121707207434177 25.020588115879583 26.03471235026419 25.82299232642205 76-77 23.011430234932902 24.946962554994315 26.278746109770623 25.76286110030216 78-79 22.916631677891505 25.002998565581443 26.106510371863127 25.97385938466393 80-81 22.71563989122406 25.002686094830445 26.223607053334806 26.05806696061068 82-83 22.701442850967688 24.89253910080795 26.085124810844107 26.320893237380254 84-85 22.474941430450247 24.73052985355498 26.20613362737926 26.588395088615517 86-87 22.606834963093117 24.70729697969085 26.26259080340973 26.423277253806305 88-89 22.273146926932206 24.530855123765114 26.301309978642113 26.894687970660563 90-91 22.093941254753734 24.60309101134537 26.349550179749244 26.953417554151653 92-93 22.16689261725032 24.322254329128317 26.427387120180253 27.083465933441108 94-95 21.839966987101263 24.212498204599896 26.494331160442236 27.4532036478566 96-97 21.916832920308984 24.08458308766379 26.493408744523144 27.50517524750408 98-99 21.631017728074386 24.07296044161686 26.448279010606345 27.847742819702404 100-101 21.639309169232394 23.87313186304954 26.63222643603737 27.855332531680695 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 117.0 1 86.0 2 89.0 3 123.0 4 104.0 5 112.0 6 216.5 7 441.0 8 674.0 9 691.0 10 543.5 11 505.0 12 523.0 13 570.5 14 669.5 15 710.5 16 758.5 17 847.0 18 915.0 19 990.5 20 1146.0 21 1383.0 22 1673.5 23 2061.5 24 2571.0 25 3280.0 26 4285.5 27 5714.0 28 7657.0 29 10533.5 30 14623.0 31 20147.0 32 27420.0 33 34905.0 34 42415.0 35 50513.5 36 59889.5 37 70361.0 38 79660.5 39 87513.0 40 97093.0 41 108664.0 42 120174.5 43 130741.0 44 137928.0 45 143272.0 46 147909.5 47 153411.0 48 162242.0 49 167278.0 50 167211.5 51 166344.0 52 164583.0 53 163619.5 54 160804.0 55 152664.5 56 139079.0 57 124484.5 58 111631.5 59 96797.0 60 82288.0 61 69697.5 62 59511.0 63 48160.0 64 36591.0 65 29120.5 66 22827.5 67 18284.5 68 14220.5 69 10367.0 70 8258.0 71 8419.0 72 8416.5 73 5938.0 74 3485.0 75 2227.5 76 1258.5 77 701.5 78 420.5 79 227.5 80 131.0 81 70.0 82 31.0 83 17.0 84 12.0 85 6.0 86 4.5 87 5.0 88 2.0 89 3.5 90 3.5 91 2.0 92 1.0 93 0.0 94 0.0 95 0.5 96 0.5 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.18398417979181406 2 0.0 3 0.012552784458648618 4 0.013583434129990293 5 0.007003132382193439 6 0.10832392314947513 7 0.14442308856108357 8 0.12542213692788703 9 0.14323387740184315 10-11 0.1152609882450441 12-13 0.11551204393421706 14-15 0.11688624349600596 16-17 0.06630512885631448 18-19 0.08006033793152839 20-21 0.0369844670523763 22-23 0.0841697231595702 24-25 0.05885273892507468 26-27 0.06683366714931022 28-29 0.04015569681035068 30-31 0.0237974366421328 32-33 0.0316726572077692 34-35 0.019912680188614175 36-37 0.023665302068883867 38-39 0.031130905457448572 40-41 0.025039501630672766 42-43 0.012433863342724578 44-45 0.026995093314756972 46-47 0.033654675806503186 48-49 0.009051218267551897 50-51 0.015129408637002809 52-53 0.006355672973273668 54-55 0.01215638073890182 56-57 0.004571856234413075 58-59 0.003897969910843518 60-61 0.02279321388544091 62-63 0.01006865448156868 64-65 0.007016345839518333 66-67 0.04162239057341384 68-69 0.09135784394431215 70-71 0.02165685655550009 72-73 0.04579784308808012 74-75 0.08775057009461629 76-77 0.23408960996780936 78-79 0.08050959548057476 80-81 0.017111427235736797 82-83 0.011508921329982049 84-85 0.012817053605146483 86-87 0.25342089803412826 88-89 0.6170420301578664 90-91 0.2646259098456377 92-93 0.3510815611224145 94-95 0.0012024246165652887 96-97 0.003805475709569265 98-99 0.0028408933248520556 100-101 0.004519002405113503 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3784021.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.87669430417195 #Duplication Level Percentage of deduplicated Percentage of total 1 71.21027168506106 32.668918654125775 2 13.215702094795958 12.125854500359182 3 5.748679675836075 7.911912604228137 4 3.116392457979817 5.718791365062684 5 1.792504128899544 4.111708198024521 6 1.159768332509323 3.1923802352513677 7 0.7726299351921199 2.4811995142942744 8 0.5546501503796595 2.0356412315784516 9 0.3902942767837304 1.6114870102207568 >10 1.818194925661347 14.524874592559167 >50 0.12757370745978677 4.026307051835365 >100 0.08729756083079605 7.391545528878061 >500 0.004821237464582117 1.4074131581023248 >1k 0.0012198311463376952 0.7919663554798814 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 2.6426914649786564E-5 0.0 0.0 0.0 0.0 6 2.6426914649786564E-5 0.0 0.0 0.0 0.0 7 2.6426914649786564E-5 0.0 0.0 0.0 0.0 8 2.6426914649786564E-5 0.0 0.0 0.0 0.0 9 2.6426914649786564E-5 0.0 0.0 0.0 0.0 10-11 2.6426914649786564E-5 0.0 0.0 0.0 0.0 12-13 6.60672866244664E-5 0.0 0.0 0.0 0.0 14-15 1.1892111592403954E-4 0.0 0.0 2.6426914649786564E-5 0.0 16-17 1.321345732489328E-4 0.0 0.0 2.6426914649786564E-5 0.0 18-19 1.321345732489328E-4 0.0 0.0 3.9640371974679845E-5 0.0 20-21 1.5856148789871938E-4 0.0 0.0 1.453480305738261E-4 0.0 22-23 1.5856148789871938E-4 2.6426914649786564E-5 0.0 3.039095184725455E-4 0.0 24-25 1.5856148789871938E-4 2.6426914649786564E-5 0.0 9.777958420421028E-4 0.0 26-27 1.9820185987339922E-4 2.6426914649786564E-5 0.0 0.002074512800008245 0.0 28-29 2.3784223184807906E-4 2.6426914649786564E-5 0.0 0.00776951290703725 0.0 30-31 2.642691464978656E-4 2.6426914649786564E-5 0.0 0.029254594517313725 0.0 32-33 2.642691464978656E-4 2.6426914649786564E-5 0.0 0.07517135872131789 0.0 34-35 3.435498904472253E-4 2.6426914649786564E-5 0.0 0.13660072182474675 0.0 36-37 3.699768050970119E-4 2.6426914649786564E-5 0.0 0.23591306707864468 0.0 38-39 3.699768050970119E-4 2.6426914649786564E-5 0.0 0.4007641606640132 0.0 40-41 3.699768050970119E-4 2.6426914649786564E-5 0.0 0.5909983057705017 0.0 42-43 3.9640371974679844E-4 2.6426914649786564E-5 0.0 0.7887905484668294 0.0 44-45 4.0961717707169176E-4 2.6426914649786564E-5 0.0 1.030002211932756 0.0 46-47 4.756844636961581E-4 2.6426914649786564E-5 0.0 1.3269085980231081 0.0 48-49 4.756844636961581E-4 2.6426914649786564E-5 0.0 1.637979810365746 0.0 50-51 4.756844636961581E-4 2.6426914649786564E-5 0.0 1.9791380650371655 0.0 52-53 4.756844636961581E-4 2.6426914649786564E-5 0.0 2.3223311921366188 0.0 54-55 4.888979210210514E-4 2.6426914649786564E-5 0.0 2.707741315389106 2.6426914649786564E-5 56-57 5.021113783459447E-4 2.6426914649786564E-5 0.0 3.1624824492253083 2.6426914649786564E-5 58-59 5.021113783459447E-4 2.6426914649786564E-5 0.0 3.6464517506641743 2.6426914649786564E-5 60-61 5.021113783459447E-4 2.6426914649786564E-5 0.0 4.165397073642033 2.6426914649786564E-5 62-63 5.285382929957312E-4 2.6426914649786564E-5 0.0 4.691741932721833 2.6426914649786564E-5 64-65 5.285382929957312E-4 2.6426914649786564E-5 0.0 5.2532345882858476 2.6426914649786564E-5 66-67 5.681786649704111E-4 2.6426914649786564E-5 0.0 5.893743718652724 2.6426914649786564E-5 68-69 6.342459515948775E-4 2.6426914649786564E-5 0.0 6.587622003154845 5.285382929957313E-5 70-71 6.342459515948775E-4 2.6426914649786564E-5 0.0 7.331645358204936 5.285382929957313E-5 72-73 6.606728662446641E-4 2.6426914649786564E-5 0.0 8.073620627369667 5.285382929957313E-5 74-75 6.606728662446641E-4 2.6426914649786564E-5 0.0 8.849752683719249 5.285382929957313E-5 76-77 6.606728662446641E-4 2.6426914649786564E-5 0.0 9.700501133582504 5.285382929957313E-5 78-79 6.606728662446641E-4 2.6426914649786564E-5 0.0 10.60979841285236 6.60672866244664E-5 80-81 6.606728662446641E-4 2.6426914649786564E-5 0.0 11.562845449324938 7.928074394935969E-5 82-83 6.606728662446641E-4 2.6426914649786564E-5 0.0 12.521032520696899 7.928074394935969E-5 84-85 6.738863235695573E-4 2.6426914649786564E-5 0.0 13.488799348629408 7.928074394935969E-5 86-87 7.003132382193439E-4 2.6426914649786564E-5 0.0 14.49030013311237 7.928074394935969E-5 88-89 7.135266955442372E-4 2.6426914649786564E-5 0.0 15.554023088138253 7.928074394935969E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3040 0.0 47.70451 1 GTATCAA 5540 0.0 44.973297 1 TCAACGC 7075 0.0 34.826256 4 ATCAACG 7135 0.0 34.799545 3 CAACGCA 7350 0.0 33.45377 5 TATCAAC 7675 0.0 32.472244 2 AACGCAG 7725 0.0 32.075592 6 ACGCAGA 9105 0.0 26.744843 7 GTACATG 11520 0.0 25.920319 1 TACATGG 11510 0.0 25.282297 2 CGCAGAG 9790 0.0 24.678598 8 ACATGGG 11865 0.0 24.207699 3 GCAGAGT 10740 0.0 21.169514 9 CATGGGG 8390 0.0 20.879988 4 AGAGTAC 9335 0.0 18.582365 10-11 GAGTACA 8800 0.0 17.776505 1 TATTAAG 2120 0.0 17.689787 2 CAGAGTA 10360 0.0 17.08744 10-11 AGTACAT 8855 0.0 16.887033 2 GTATTAA 1970 0.0 16.653902 1 >>END_MODULE