##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920889_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3552774 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.354118218608896 31.0 30.0 34.0 27.0 34.0 2 30.362984529834996 31.0 30.0 34.0 26.0 34.0 3 30.49862501808446 31.0 30.0 34.0 27.0 34.0 4 34.15858424994103 35.0 35.0 37.0 30.0 37.0 5 33.70825557719123 35.0 35.0 37.0 28.0 37.0 6 33.6587919749469 35.0 35.0 37.0 29.0 37.0 7 33.474394656119415 35.0 35.0 37.0 28.0 37.0 8 33.40303717602077 35.0 35.0 37.0 28.0 37.0 9 34.73903518771529 38.0 35.0 39.0 27.0 39.0 10-11 34.55271247200075 38.0 34.0 39.0 27.0 39.0 12-13 34.384925553947426 37.0 34.0 39.0 27.0 39.0 14-15 35.29131715104873 38.0 34.0 40.0 27.0 41.0 16-17 35.167157409956275 38.0 34.0 40.0 26.5 41.0 18-19 35.083278024439494 38.5 34.0 40.0 26.0 41.0 20-21 34.968639716458185 38.0 34.0 40.0 25.0 41.0 22-23 34.81894387315377 38.0 34.0 40.0 25.0 41.0 24-25 34.63331610735724 38.0 33.5 40.0 24.5 41.0 26-27 34.44770846667984 38.0 33.0 40.0 24.0 41.0 28-29 34.38228564496363 38.0 33.0 40.0 24.0 41.0 30-31 34.36044890555944 38.0 33.0 40.0 24.0 41.0 32-33 34.2028246097275 38.0 33.0 40.0 23.0 41.0 34-35 34.03154098740871 38.0 33.0 40.0 22.5 41.0 36-37 33.82627856429933 38.0 33.0 40.0 21.0 41.0 38-39 33.63153749717826 38.0 33.0 40.0 19.5 41.0 40-41 33.382638327121285 38.0 32.0 40.0 18.0 41.0 42-43 33.40040177056013 38.0 32.0 40.0 18.0 41.0 44-45 33.24478703120435 38.0 32.0 40.0 16.5 41.0 46-47 32.98099696181069 37.5 32.0 40.0 15.0 41.0 48-49 32.706377185827186 37.0 31.0 40.0 12.5 41.0 50-51 32.43929292997528 37.0 31.0 40.0 9.0 41.0 52-53 32.1703095946998 37.0 31.0 40.0 8.5 41.0 54-55 31.87517556703579 36.0 30.5 39.5 7.5 41.0 56-57 31.542666378441183 36.0 30.0 39.0 6.5 41.0 58-59 31.204146253040584 35.0 29.5 39.0 2.0 40.0 60-61 30.87205673651068 35.0 29.0 39.0 2.0 40.0 62-63 30.54406950737649 35.0 29.0 38.5 2.0 40.0 64-65 30.138390452080543 35.0 28.0 38.0 2.0 40.0 66-67 29.699962902227952 34.0 28.0 37.5 2.0 40.0 68-69 29.260957494059575 34.0 28.0 37.0 2.0 39.5 70-71 28.8394443327946 34.0 26.5 36.5 2.0 39.0 72-73 28.413501112088753 34.0 26.0 36.0 2.0 39.0 74-75 27.983621108463417 33.0 26.0 35.5 2.0 38.5 76-77 26.539553036584934 31.5 24.5 34.0 2.0 36.0 78-79 27.399148665240176 33.0 26.0 35.0 2.0 37.0 80-81 27.443359752126085 33.0 26.0 35.0 2.0 36.5 82-83 27.124072203860983 33.0 25.5 35.0 2.0 36.0 84-85 26.810113167907666 33.0 25.0 35.0 2.0 36.0 86-87 26.281797688228973 33.0 24.0 35.0 2.0 35.0 88-89 25.92616248598982 32.0 23.5 35.0 2.0 35.0 90-91 25.57005821366628 32.0 21.5 35.0 2.0 35.0 92-93 25.264183283259783 32.0 20.0 34.0 2.0 35.0 94-95 24.88718027096573 32.0 18.5 34.0 2.0 35.0 96-97 24.368556373132655 32.0 11.0 34.0 2.0 35.0 98-99 23.77804428314326 31.5 2.0 34.0 2.0 35.0 100-101 21.580436582794178 28.0 2.0 33.0 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 76268.0 3 35518.0 4 19187.0 5 13697.0 6 11858.0 7 12194.0 8 14160.0 9 15939.0 10 18023.0 11 20399.0 12 22610.0 13 24676.0 14 26799.0 15 28838.0 16 30527.0 17 32004.0 18 30115.0 19 29106.0 20 29313.0 21 30374.0 22 33441.0 23 37884.0 24 44452.0 25 51615.0 26 61657.0 27 72895.0 28 85771.0 29 101126.0 30 119412.0 31 142288.0 32 171128.0 33 209742.0 34 264496.0 35 344157.0 36 455989.0 37 519709.0 38 292978.0 39 22429.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.074407209255895 19.121047638707 13.310085310430479 24.494459841606627 2 16.209587212696334 20.65293204690194 37.69564289763436 25.441837842767367 3 19.026673606745803 24.82526173791555 29.276277174899846 26.8717874804388 4 13.639512687142997 16.330166086900956 35.69501649214579 34.33530473381026 5 14.430086569485 37.31613766220167 33.741831859169345 14.511943909143982 6 33.692483736651965 35.21063103227423 16.88057615095926 14.216309080114547 7 29.497364079491124 31.772799239623676 20.72919006786618 18.00064661301902 8 27.401803365775507 33.9227503371271 19.870419193064976 18.80502710403242 9 27.291620392659148 15.214865484983545 19.169559614263633 38.32395450809368 10-11 25.99825484430058 25.187883214620193 27.32657955541503 21.48728238566419 12-13 26.437775823380612 22.633473788800554 27.39092956195422 23.53782082586462 14-15 23.652049382034164 24.221524517217052 24.665514199399006 27.460911901349778 16-17 23.751870407599224 27.324956254466976 25.475694383320015 23.44747895461379 18-19 23.86422072568913 26.19295680437961 27.02541488041171 22.917407589519563 20-21 24.623637278257878 25.47834378861599 26.488566674302167 23.40945225882396 22-23 24.322047040797397 25.296116048784867 26.580826782517125 23.80101012790061 24-25 23.96831460981111 25.7569124149788 26.552609889123385 23.72216308608671 26-27 23.738906587399622 25.811160356487644 26.516722311235068 23.93321074487767 28-29 23.873727118545276 25.816822210952463 26.59145556280487 23.717995107697394 30-31 23.88597845221077 25.742815937227476 26.49150553686823 23.879700073693524 32-33 23.606289337926196 25.790813036835814 26.254899907027767 24.347997718210227 34-35 24.158394461945512 25.823552356548994 26.263472846536978 23.754580334968516 36-37 24.23220293649788 25.482537269310356 26.345214465700973 23.940045328490786 38-39 24.13053559497272 25.508681621688133 26.26552723109667 24.095255552242477 40-41 23.99627857949173 25.556316187855437 26.551074018907507 23.896331213745327 42-43 24.140387443738653 25.460383440679777 26.24165554353981 24.157573572041755 44-45 23.90300988466576 25.51275929369181 26.402992991651473 24.181237829990955 46-47 24.084246531564293 25.52285227010676 26.24618861341129 24.14671258491765 48-49 23.843626990859416 25.6671267710818 26.027032858548928 24.462213379509855 50-51 23.668383356051738 25.887228315183947 26.216279215108667 24.228109113655645 52-53 24.06486859877966 25.421308245899304 26.277654368267395 24.236168787053643 54-55 23.71913519861881 25.440819163433794 26.40467166829894 24.43537396964846 56-57 23.646402665774172 25.726237963355736 26.15377123556933 24.473588135300762 58-59 23.50089511402852 25.389332380046277 26.287190861955402 24.8225816439698 60-61 23.393770709787837 25.499720080458037 26.47575736289749 24.63075184685663 62-63 23.154422211256232 25.57623767839011 26.47969807428618 24.789642036067477 64-65 23.244189969397596 25.4921149157417 26.33578874136048 24.927906373500228 66-67 23.2351951476719 25.658923460099654 26.1647966862699 24.941084705958545 68-69 23.55287900043513 25.329817161803852 26.106728418008768 25.01057541975225 70-71 23.132927522628545 25.27567335949805 26.25581558703311 25.335583530840296 72-73 23.20817051099626 25.214894509147857 26.125850109302284 25.451084870553604 74-75 23.15983147092203 25.363891049114777 26.043365628964732 25.432911850998458 76-77 23.081245216876095 25.093172608614385 26.3354693545031 25.490112820006416 78-79 23.027909433430754 25.050501778231627 26.268657347089686 25.652931441247933 80-81 23.00096758818861 25.100552316341933 26.25118555593811 25.64729453953134 82-83 22.959299220018426 25.0733638719966 26.158638244925335 25.808698663059644 84-85 22.582686563802863 25.048729404014896 26.266598541214492 26.10198549096775 86-87 22.75917971133706 24.910952443772526 26.18638011542849 26.143487729461917 88-89 22.60266727387583 24.8569171361988 26.01957824735475 26.520837342570612 90-91 22.448674043292012 24.867091062747974 26.138444863481443 26.545790030478567 92-93 22.502511787819532 24.733999057143915 26.140063559459676 26.623425595576883 94-95 22.181469512591587 24.443631923515696 26.475576943808548 26.899321620084166 96-97 22.333510666745482 24.161058145655474 26.42280507680226 27.08262611079679 98-99 22.224216039325018 24.23243553860295 26.289365162535738 27.253983259536298 100-101 22.32490478421579 24.04674788537991 26.358808513848427 27.269538816555873 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 248.0 1 177.0 2 157.0 3 235.0 4 199.5 5 184.5 6 314.5 7 598.0 8 928.5 9 1020.0 10 844.0 11 687.0 12 663.0 13 683.5 14 723.0 15 791.5 16 894.0 17 969.5 18 1058.0 19 1198.5 20 1319.0 21 1537.5 22 1876.0 23 2203.5 24 2680.5 25 3416.5 26 4515.0 27 6289.0 28 8700.5 29 12250.5 30 17284.0 31 23826.5 32 31852.0 33 37893.5 34 43189.5 35 49926.0 36 58476.0 37 69025.5 38 77851.0 39 83789.5 40 89167.5 41 95337.0 42 102658.0 43 111259.0 44 120132.5 45 128928.5 46 137058.0 47 143881.0 48 148946.5 49 152576.0 50 154682.5 51 155560.5 52 154929.5 53 155720.0 54 154366.0 55 145707.5 56 134399.0 57 122193.5 58 111756.5 59 99861.5 60 84390.0 61 70112.5 62 56966.0 63 42828.0 64 30733.5 65 23370.5 66 18324.5 67 14016.5 68 10433.0 69 7936.0 70 6141.0 71 4597.5 72 3446.5 73 3027.0 74 2402.0 75 1711.5 76 1180.0 77 752.0 78 446.5 79 208.0 80 114.5 81 59.5 82 39.5 83 27.0 84 14.5 85 7.0 86 5.5 87 5.0 88 3.5 89 1.0 90 1.0 91 0.5 92 0.0 93 0.5 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.18762803375615786 2 0.0 3 0.012975776111849502 4 0.013426128428095903 5 0.007093048980880856 6 0.10816899695843304 7 0.14233947895362892 8 0.12410021014564956 9 0.1425928021315175 10-11 0.11521982540966579 12-13 0.1148679876625983 14-15 0.11696494063512061 16-17 0.06787653816426263 18-19 0.08065528513775433 20-21 0.0388288137663696 22-23 0.08515880830021835 24-25 0.059545020313704164 26-27 0.06790468518402802 28-29 0.04168573627255773 30-31 0.025374538318508298 32-33 0.03310089524411066 34-35 0.02163098468971007 36-37 0.026007846263229804 38-39 0.03352310054059166 40-41 0.025458979377804496 42-43 0.01380611319492881 44-45 0.02842848996305422 46-47 0.03504303960792327 48-49 0.00899297281504537 50-51 0.01655044762205533 52-53 0.006713064214047952 54-55 0.013144658230441903 56-57 0.0052071986565990405 58-59 0.004334641043871634 60-61 0.02422051050812689 62-63 0.010611426451555883 64-65 0.007754503945367761 66-67 0.04191091243068093 68-69 0.09202668112297602 70-71 0.022222072104783476 72-73 0.045401142881590556 74-75 0.08780462815816599 76-77 0.23675865675666397 78-79 0.08159821029989524 80-81 0.01809853370915234 82-83 0.012567644325251197 84-85 0.014186097961761712 86-87 0.2539283388135581 88-89 0.6154486606803584 90-91 0.26639746856963037 92-93 0.35090889541524456 94-95 0.0012666158894430097 96-97 0.004053170846217632 98-99 0.0035043039607923275 100-101 0.005221272166481741 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3552774.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.40999099090525 #Duplication Level Percentage of deduplicated Percentage of total 1 67.79932934123728 24.685729705038675 2 11.401380707157063 8.302483376629393 3 5.676073747181212 6.199973819957451 4 3.556637471075467 5.179885531190951 5 2.3346988355678366 4.250318178475096 6 1.693850137854783 3.700384095554176 7 1.2749433102694618 3.249447210857822 8 0.9398646313175665 2.7376370207154466 9 0.784038427483336 2.5692148873072607 >10 4.261749086462776 27.280302190941246 >50 0.1921916206709227 4.752212520359581 >100 0.0791751981010222 5.070481896964864 >500 0.00435614352546519 1.0500359549533367 >1k 0.0017113420958833208 0.9718936110547163 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.1258807906160088E-4 2 0.0 0.0 0.0 0.0 1.1258807906160088E-4 3 0.0 0.0 0.0 0.0 1.1258807906160088E-4 4 0.0 0.0 0.0 2.814701976540022E-5 1.1258807906160088E-4 5 0.0 2.814701976540022E-5 0.0 2.814701976540022E-5 1.688821185924013E-4 6 2.814701976540022E-5 2.814701976540022E-5 0.0 2.814701976540022E-5 1.9702913835780155E-4 7 2.814701976540022E-5 2.814701976540022E-5 0.0 2.814701976540022E-5 1.9702913835780155E-4 8 2.814701976540022E-5 2.814701976540022E-5 0.0 2.814701976540022E-5 1.9702913835780155E-4 9 2.814701976540022E-5 2.814701976540022E-5 0.0 2.814701976540022E-5 1.9702913835780155E-4 10-11 2.814701976540022E-5 2.814701976540022E-5 0.0 5.629403953080044E-5 2.53323177888602E-4 12-13 2.814701976540022E-5 2.814701976540022E-5 0.0 5.629403953080044E-5 6.47381454604205E-4 14-15 2.814701976540022E-5 2.814701976540022E-5 0.0 5.629403953080044E-5 8.021900633139064E-4 16-17 2.814701976540022E-5 2.814701976540022E-5 0.0 8.444105929620065E-5 9.147781423755072E-4 18-19 2.814701976540022E-5 2.814701976540022E-5 0.0 1.1258807906160088E-4 9.569986720236075E-4 20-21 2.814701976540022E-5 2.814701976540022E-5 0.0 2.1110264824050165E-4 0.0012525423795603098 22-23 2.814701976540022E-5 2.814701976540022E-5 0.0 5.20719865659904E-4 0.0013510569487392105 24-25 2.814701976540022E-5 4.2220529648100334E-5 0.0 0.0013229099289738104 0.0013792039685046108 26-27 2.814701976540022E-5 5.629403953080044E-5 0.0 0.0027161874073611215 0.0015058655574489118 28-29 2.814701976540022E-5 5.629403953080044E-5 0.0 0.009133707913872371 0.001548086087097012 30-31 2.814701976540022E-5 5.629403953080044E-5 0.0 0.033171262793524156 0.0016184536365105126 32-33 2.814701976540022E-5 5.629403953080044E-5 0.0 0.0790931255407746 0.0017451152254548137 34-35 2.814701976540022E-5 5.629403953080044E-5 0.0 0.1406225107479395 0.0018577033045164145 36-37 4.2220529648100334E-5 5.629403953080044E-5 0.0 0.2432606183224714 0.0018577033045164145 38-39 7.036754941350055E-5 5.629403953080044E-5 0.0 0.41325454419560603 0.0019702913835780156 40-41 8.444105929620065E-5 5.629403953080044E-5 0.0 0.6082993176599468 0.0019702913835780156 42-43 8.444105929620065E-5 5.629403953080044E-5 0.0 0.8074817030298015 0.0020125119132261156 44-45 8.444105929620065E-5 5.629403953080044E-5 0.0 1.0457321518340317 0.0021250999922877165 46-47 8.444105929620065E-5 5.629403953080044E-5 0.0 1.339263347457508 0.0022939821108801176 48-49 8.444105929620065E-5 5.629403953080044E-5 0.0 1.6518782224819253 0.002406570189941719 50-51 8.444105929620065E-5 7.036754941350055E-5 0.0 1.9958770245447641 0.0025050847591206195 52-53 8.444105929620065E-5 8.444105929620065E-5 0.0 2.3349078776190098 0.002673966877713021 54-55 8.444105929620065E-5 8.444105929620065E-5 0.0 2.7113742669812377 0.0027443344271265214 56-57 8.444105929620065E-5 8.444105929620065E-5 0.0 3.159094836879576 0.0028147019765400218 58-59 8.444105929620065E-5 8.444105929620065E-5 0.0 3.638874862290706 0.0028709960160708224 60-61 8.444105929620065E-5 8.444105929620065E-5 0.0 4.1535853392306965 0.0028709960160708224 62-63 8.444105929620065E-5 8.444105929620065E-5 0.0 4.669843902257785 0.003039878134663224 64-65 8.444105929620065E-5 8.444105929620065E-5 0.0 5.213531736046256 0.003068025154428624 66-67 8.444105929620065E-5 8.444105929620065E-5 0.0 5.833695022537318 0.0031524662137248248 68-69 8.444105929620065E-5 8.444105929620065E-5 0.0 6.527983485580563 0.003222833763138325 70-71 8.444105929620065E-5 8.444105929620065E-5 0.0 7.267546429916454 0.0033072748224345257 72-73 8.444105929620065E-5 8.444105929620065E-5 0.0 8.017565992095191 0.003504303960792327 74-75 8.444105929620065E-5 8.444105929620065E-5 0.0 8.771807607238738 0.0036591125695020284 76-77 8.444105929620065E-5 8.444105929620065E-5 0.0 9.589548898973028 0.0036591125695020284 78-79 8.444105929620065E-5 8.444105929620065E-5 0.0 10.491703102983752 0.003715406609032829 80-81 8.444105929620065E-5 8.444105929620065E-5 0.0 11.445915220050587 0.0037435536287982294 82-83 8.444105929620065E-5 8.444105929620065E-5 0.0 12.394371271575395 0.0037998476683290296 84-85 8.444105929620065E-5 8.444105929620065E-5 0.0 13.348428580033517 0.00382799468809443 86-87 8.444105929620065E-5 8.444105929620065E-5 0.0 14.325102018873139 0.003940582767156031 88-89 8.444105929620065E-5 8.444105929620065E-5 0.0 15.370243083292099 0.004053170846217632 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 4155 0.0 47.381943 1 GTATCAA 7595 0.0 40.259346 1 TCAACGC 9625 0.0 31.172869 4 ATCAACG 9750 0.0 30.724524 3 CAACGCA 9970 0.0 30.04274 5 AACGCAG 10415 0.0 28.804684 6 TATCAAC 10540 0.0 28.643219 2 GTACATG 15235 0.0 28.497835 1 TACATGG 15825 0.0 27.206263 2 ACATGGG 16490 0.0 25.594196 3 ACGCAGA 12420 0.0 23.618582 7 CGCAGAG 12695 0.0 23.068264 8 CATGGGG 10520 0.0 22.92495 4 TAAGGTG 1420 0.0 22.062815 5 GCAGAGT 13765 0.0 20.309607 9 GAGTACA 11615 0.0 20.26607 1 AGTACAT 11775 0.0 18.987392 2 AGAGTAC 12185 0.0 18.286976 10-11 GAGTACT 4835 0.0 17.274366 12-13 CAGAGTA 13235 0.0 16.889967 10-11 >>END_MODULE