##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920888_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5104919 Sequences flagged as poor quality 0 Sequence length 98 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.757007897676733 31.0 30.0 33.0 23.0 34.0 2 28.785110988048977 31.0 28.0 34.0 22.0 34.0 3 28.860440488869656 31.0 28.0 34.0 22.0 34.0 4 32.35851871498843 35.0 33.0 37.0 25.0 37.0 5 32.321437813215056 35.0 32.0 37.0 25.0 37.0 6 32.44776636024979 35.0 33.0 37.0 25.0 37.0 7 32.28375396357905 35.0 32.0 37.0 23.0 37.0 8 32.227326231816804 35.0 32.0 37.0 23.0 37.0 9 33.50613751168236 37.0 33.0 39.0 23.0 39.0 10-11 33.30945907271007 37.0 33.0 39.0 22.0 39.0 12-13 33.13374893901353 37.0 32.0 39.0 19.5 39.0 14-15 33.91017389306275 38.0 33.0 40.0 19.0 41.0 16-17 33.79470242329016 38.0 32.5 40.0 18.0 41.0 18-19 33.66812421509529 38.0 32.0 40.0 18.0 41.0 20-21 33.57195667551238 38.0 32.0 40.0 18.0 41.0 22-23 33.34869671781276 38.0 32.0 40.0 17.5 41.0 24-25 33.148107540981556 38.0 32.0 40.0 16.5 41.0 26-27 33.210757996356065 38.0 32.0 40.0 16.0 41.0 28-29 33.05847458108542 38.0 32.0 40.0 15.5 41.0 30-31 32.82328250458038 38.0 31.5 40.0 10.5 41.0 32-33 32.59612130966231 37.5 31.0 40.0 9.5 41.0 34-35 32.26578511823596 37.0 30.5 40.0 8.5 41.0 36-37 31.965819242185823 37.0 30.0 40.0 8.0 41.0 38-39 31.776197624291395 37.0 30.0 40.0 7.5 41.0 40-41 31.592235743603375 37.0 30.0 40.0 2.0 41.0 42-43 31.368333464252814 37.0 30.0 40.0 2.0 41.0 44-45 31.102898596432183 36.0 29.5 39.5 2.0 41.0 46-47 30.86099005684517 36.0 29.0 39.0 2.0 40.0 48-49 30.577988602757458 36.0 28.0 39.0 2.0 40.0 50-51 29.433924220932788 34.0 27.0 38.0 2.0 39.5 52-53 29.899814179225956 35.0 28.0 38.5 2.0 39.5 54-55 30.564227365801493 36.0 29.0 39.0 2.0 40.0 56-57 30.52154049848783 36.0 28.5 39.0 2.0 41.0 58-59 30.27794917020231 35.0 28.0 39.0 2.0 41.0 60-61 29.957706772624597 35.0 28.0 39.0 2.0 40.0 62-63 29.566577452061434 35.0 28.0 39.0 2.0 40.0 64-65 29.14067774630704 34.0 26.5 38.0 2.0 40.0 66-67 28.760303052800644 34.0 26.0 38.0 2.0 40.0 68-69 28.314926348488584 34.0 26.0 37.0 2.0 40.0 70-71 27.980943674130774 34.0 26.0 37.0 2.0 39.0 72-73 27.511757189487238 33.5 25.0 36.0 2.0 39.0 74-75 27.059238354222664 33.0 24.0 36.0 2.0 38.5 76-77 26.63588746461991 33.0 23.5 35.0 2.0 37.5 78-79 26.16389486297432 32.5 22.0 35.0 2.0 37.0 80-81 25.705553604278542 32.0 20.0 35.0 2.0 36.5 82-83 25.22211890139687 32.0 18.5 35.0 2.0 36.0 84-85 24.81696810468491 32.0 17.0 35.0 2.0 35.5 86-87 24.35400796760928 31.0 9.0 34.0 2.0 35.0 88-89 23.81536455328674 31.0 4.5 34.0 2.0 35.0 90-91 23.31299752258557 31.0 2.0 34.0 2.0 35.0 92-93 22.762842760090805 30.5 2.0 34.0 2.0 35.0 94-95 22.11611104897061 30.0 2.0 34.0 2.0 35.0 96-97 21.460103676473615 29.5 2.0 34.0 2.0 35.0 98 21.056210098534375 29.0 2.0 34.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 235809.0 3 42040.0 4 31473.0 5 25575.0 6 23953.0 7 24384.0 8 27838.0 9 31868.0 10 35224.0 11 38432.0 12 39278.0 13 38949.0 14 36917.0 15 38104.0 16 40864.0 17 43880.0 18 45610.0 19 46417.0 20 48668.0 21 51651.0 22 56539.0 23 63332.0 24 72050.0 25 82404.0 26 95777.0 27 110664.0 28 129049.0 29 149128.0 30 173857.0 31 203741.0 32 241650.0 33 292996.0 34 361564.0 35 459035.0 36 583383.0 37 649629.0 38 394199.0 39 38986.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.857826610067214 17.527537965042647 12.295005089664413 25.319630335225728 2 16.276024114137744 19.505193066715155 38.50761639335011 25.71116642579699 3 19.162021451031418 23.237768360757265 28.804797494982854 28.79541269322846 4 13.27018312828031 15.383551388905486 35.97394814039698 35.372317342417226 5 14.731955585572187 36.50637745680358 34.078988024108135 14.682678933516097 6 34.40229197481602 34.40399661345124 17.093920298542965 14.099791113189768 7 30.158022362582926 30.97431874566407 20.633245372247018 18.23441351950599 8 27.00639495691147 34.086826678703126 20.017177030971354 18.889601333414046 9 27.110929673908636 15.337559714463639 19.096111025463873 38.45539958616386 10-11 25.87841797984531 25.123057852470048 27.504624953672106 21.493899214012533 12-13 26.50517924883971 22.26347763935604 27.36515014400107 23.866192967803176 14-15 23.520214466497936 23.844921210791497 24.705294666154725 27.92956965655584 16-17 24.232562736359924 26.961180675877838 25.24351640778269 23.56274017997955 18-19 24.05027001048884 26.06585189129818 26.6023651576486 23.28151294056438 20-21 24.615032192067904 25.620639779366417 26.250444525388033 23.513883503177645 22-23 24.3848158530911 25.37758503616781 26.046842956350584 24.1907561543905 24-25 24.28281102560072 25.485901239088342 26.13329912220625 24.09798861310469 26-27 24.022928276652685 25.86374571376371 25.967377948612995 24.14594806097061 28-29 24.05561914692612 25.925927377783704 26.12966040901447 23.88879306627571 30-31 24.123776784953947 25.598675808067426 25.994978912864763 24.28256849411386 32-33 24.01772075537056 25.708741558145505 25.877953357183447 24.395584329300483 34-35 24.548082706778 25.677754331872105 25.69914750608359 24.075015455266303 36-37 24.46708841830927 25.42729647273986 25.74276851276778 24.36284659618309 38-39 24.229899634333506 25.602686493995254 26.012062536734177 24.155351334937066 40-41 24.355239219822554 25.30010666588464 26.114306189052023 24.230347925240785 42-43 24.296363604709114 25.299887012140466 25.889800295655007 24.51394908749541 44-45 24.167562173477634 25.495452582324347 25.88659107697609 24.450394167221933 46-47 24.134791146175502 25.48587287787843 25.770803839448643 24.608532136497427 48-49 24.232860917224876 25.426009757845325 25.838556536597128 24.502572788332667 50-51 23.997563618272665 25.514579945373132 26.00179729854623 24.486059137807963 52-53 24.192290222127383 25.37461239148954 25.975798491486067 24.45729889489701 54-55 23.725926471033848 25.176270630166762 26.29166419072527 24.806138708074112 56-57 23.77439076805114 25.468292321180265 26.2845717628587 24.472745147909894 58-59 23.833316943652278 25.10072770183892 26.268000786704693 24.797954567804112 60-61 23.860654941210765 25.04817306266196 26.474255048533035 24.616916947594238 62-63 23.715146995427926 25.170843048593603 26.415635354422136 24.69837460155633 64-65 23.5472807187036 24.970219953241294 26.363054482433217 25.119444845621892 66-67 23.56352094489931 25.17817919606964 26.245069875371485 25.013229983659567 68-69 23.514860759760072 24.882819518603373 26.478348520581978 25.123971201054573 70-71 23.347871164675027 24.878083833418412 26.4848243383881 25.289220663518456 72-73 23.423425194373852 24.81497331291045 26.51021091764588 25.25139057506982 74-75 23.351077540735204 24.88580128957597 26.39406055659139 25.36906061309743 76-77 23.322589581302235 24.69614481787655 26.610739801616468 25.370525799204746 78-79 23.24247361210704 24.648288357802446 26.63443971956817 25.474798310522345 80-81 23.150564674287914 24.779876983112157 26.681034559013884 25.38852378358605 82-83 23.189335323037298 24.6630286166709 26.599009655777543 25.54862640451426 84-85 23.127511673230146 24.455316418001395 26.69645866973825 25.720713239030214 86-87 23.183456015735214 24.340573082143294 26.89434154198946 25.58162936013204 88-89 22.995381466487615 24.224483536274853 26.940472234729246 25.83966276250828 90-91 22.958453690150076 24.294914392308197 27.03024819198171 25.716383725560014 92-93 23.088246176924777 23.964863372903526 27.089199077251262 25.85769137292043 94-95 22.910822033271952 23.88326550413501 27.165259761192996 26.04065270140004 96-97 23.125272062746944 23.69363933637379 27.157319371221405 26.023769229657862 98 23.015324837574333 23.6168904610031 27.077548796495293 26.29023590492728 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 52.0 1 57.5 2 113.5 3 177.5 4 177.0 5 217.5 6 354.5 7 651.5 8 976.5 9 1149.5 10 1232.0 11 1359.0 12 1604.0 13 1875.5 14 2109.0 15 2254.5 16 2396.5 17 2471.0 18 2440.5 19 2461.0 20 2457.5 21 2452.5 22 2585.0 23 2813.0 24 3347.0 25 4236.5 26 5495.0 27 7515.5 28 10441.0 29 14688.0 30 20936.0 31 29574.5 32 39593.0 33 49989.0 34 61405.0 35 74430.5 36 89306.5 37 105128.0 38 117850.5 39 129843.5 40 145093.0 41 160396.0 42 174912.0 43 186793.5 44 197382.5 45 205975.0 46 212816.5 47 226654.5 48 237913.0 49 239421.5 50 239246.0 51 238563.5 52 237196.0 53 233729.5 54 224491.5 55 211275.5 56 193037.5 57 171749.0 58 153838.5 59 132991.0 60 109978.0 61 90662.0 62 75175.0 63 59654.5 64 44292.5 65 33610.5 66 26244.0 67 20366.5 68 14857.5 69 11155.5 70 8858.0 71 7540.0 72 6301.0 73 4569.5 74 3438.5 75 2371.0 76 1447.5 77 851.5 78 468.0 79 230.5 80 131.0 81 88.0 82 52.5 83 33.0 84 19.5 85 15.0 86 14.0 87 13.0 88 9.0 89 7.5 90 7.5 91 10.0 92 8.0 93 4.0 94 4.5 95 3.5 96 3.0 97 2.0 98 0.5 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.37457989049385504 2 0.023330438739576475 3 0.018061011350033174 4 0.015514447927577304 5 0.021195243254594244 6 0.02346756138540102 7 0.015044313141893143 8 0.008384070344700865 9 0.0 10-11 5.876684821052009E-5 12-13 0.005279221864245055 14-15 0.003114642955157565 16-17 0.005553467155894149 18-19 0.03675866355568031 20-21 0.07782689598013211 22-23 0.09680858795213008 24-25 0.06395791980244936 26-27 0.07261623543879933 28-29 0.056788364320765915 30-31 0.05166585405174891 32-33 0.018815185902068182 34-35 0.33002482507557906 36-37 0.5066387928975955 38-39 0.4632688589182316 40-41 0.47210347509921313 42-43 0.42369918112314814 44-45 0.39716594915609826 46-47 0.39527561553865986 48-49 0.38546155188750303 50-51 0.38216081391301215 52-53 0.4433468973748653 54-55 0.4442186056233213 56-57 0.41493312626507883 58-59 0.3999867578702032 60-61 0.4146001141252192 62-63 0.3944234962396073 64-65 0.44382682663525125 66-67 0.46343536498816146 68-69 0.40695062938314985 70-71 0.36307138271929484 72-73 0.3489771336234718 74-75 0.3323754990039999 76-77 0.3299856471767721 78-79 0.32982893558154397 80-81 0.34574495697189317 82-83 0.340749774873999 84-85 0.3413178544067007 86-87 0.3273901113808074 88-89 0.37001566528283797 90-91 0.34845802646427887 92-93 0.338761496509543 94-95 0.34537276693322655 96-97 0.3453042056103143 98 0.34008375059427975 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 5104919.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.61225379565605 #Duplication Level Percentage of deduplicated Percentage of total 1 75.59251926165352 39.0150028918548 2 12.108719173644811 12.499165742609652 3 4.8076813388539765 7.444058082887127 4 2.4175538601137725 4.9910161357144 5 1.3452295017216664 3.4715163228131285 6 0.8232604606070295 2.549419669966723 7 0.5730514601705425 2.0703534180205327 8 0.39055533260571224 1.6125952758154305 9 0.29049504719774794 1.3493793692116123 >10 1.487764215157653 13.72980174349927 >50 0.10107600989960476 3.577148924693708 >100 0.05734369621493543 5.5689266230367505 >500 0.003562983394252695 1.2551425057031411 >1k 0.0011876587648555308 0.8664732941738192 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 1.9588949403506695E-5 10-11 0.0 0.0 0.0 4.897237350876674E-5 1.9588949403506695E-5 12-13 0.0 0.0 0.0 5.876684821052009E-5 8.815027231578014E-5 14-15 0.0 0.0 0.0 5.876684821052009E-5 1.1753369642104018E-4 16-17 0.0 0.0 0.0 5.876684821052009E-5 1.1753369642104018E-4 18-19 0.0 0.0 0.0 5.876684821052009E-5 1.1753369642104018E-4 20-21 0.0 0.0 0.0 6.856132291227344E-5 1.1753369642104018E-4 22-23 0.0 0.0 0.0 2.25272918140327E-4 1.1753369642104018E-4 24-25 0.0 0.0 0.0 5.484905832981875E-4 1.1753369642104018E-4 26-27 0.0 0.0 0.0 0.0011165701159998817 1.2732817112279352E-4 28-29 0.0 0.0 0.0 0.005543672681192395 1.3712264582454688E-4 30-31 0.0 0.0 0.0 0.027091517025049763 1.3712264582454688E-4 32-33 0.0 9.794474701753347E-6 0.0 0.07155843217100996 1.3712264582454688E-4 34-35 0.0 1.9588949403506695E-5 0.0 0.1289050815497758 1.5671159522805356E-4 36-37 0.0 1.9588949403506695E-5 0.0 0.22770194786636183 1.5671159522805356E-4 38-39 0.0 1.9588949403506695E-5 0.0 0.3972443049537123 1.5671159522805356E-4 40-41 0.0 1.9588949403506695E-5 0.0 0.5945539978205334 1.5671159522805356E-4 42-43 0.0 1.9588949403506695E-5 0.0 0.8090334048395282 1.5671159522805356E-4 44-45 0.0 1.9588949403506695E-5 0.0 1.06461042770708 1.5671159522805356E-4 46-47 0.0 1.9588949403506695E-5 0.0 1.362401636539189 1.5671159522805356E-4 48-49 0.0 1.9588949403506695E-5 0.0 1.68774470270733 1.6650606992980692E-4 50-51 0.0 1.9588949403506695E-5 0.0 2.042627904575959 1.7630054463156026E-4 52-53 0.0 1.9588949403506695E-5 0.0 2.407168458500517 2.0568396873682032E-4 54-55 0.0 3.917789880701339E-5 0.0 2.815186685626158 2.1547844343857366E-4 56-57 0.0 3.917789880701339E-5 0.0 3.28549777185495 2.25272918140327E-4 58-59 0.0 5.876684821052009E-5 0.0 3.7950455237389664 2.3506739284208036E-4 60-61 0.0 5.876684821052009E-5 0.0 4.335739705174558 2.3506739284208036E-4 62-63 0.0 5.876684821052009E-5 0.0 4.8805475659848865 2.3506739284208036E-4 64-65 0.0 5.876684821052009E-5 0.0 5.464425586380509 2.3506739284208036E-4 66-67 0.0 7.835579761402678E-5 0.0 6.12739398999279 2.448618675438337E-4 68-69 0.0 7.835579761402678E-5 0.0 6.842439615594293 2.5465634224558704E-4 70-71 0.0 7.835579761402678E-5 0.0 7.605497756183791 2.5465634224558704E-4 72-73 9.794474701753347E-6 7.835579761402678E-5 0.0 8.373345394902445 2.5465634224558704E-4 74-75 1.9588949403506695E-5 7.835579761402678E-5 0.0 9.175973213287028 2.5465634224558704E-4 76-77 1.9588949403506695E-5 7.835579761402678E-5 9.794474701753347E-6 10.039620609063533 2.7424529164909377E-4 78-79 1.9588949403506695E-5 8.815027231578013E-5 1.9588949403506695E-5 10.970585429465189 2.840397663508471E-4 80-81 1.9588949403506695E-5 1.0773922171928683E-4 1.9588949403506695E-5 11.931599698251823 2.9383424105260044E-4 82-83 1.9588949403506695E-5 1.1753369642104018E-4 1.9588949403506695E-5 12.905385962049545 2.9383424105260044E-4 84-85 1.9588949403506695E-5 1.1753369642104018E-4 1.9588949403506695E-5 13.893687637355264 2.9383424105260044E-4 86 1.9588949403506695E-5 1.1753369642104018E-4 1.9588949403506695E-5 14.65159388425164 2.9383424105260044E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 5840 0.0 45.786377 1 GGTATCA 3245 0.0 40.136982 1 ATCAACG 7300 0.0 35.49891 3 TCAACGC 7265 0.0 35.480534 4 CAACGCA 7680 0.0 33.802177 5 TATCAAC 7890 0.0 32.786556 2 AACGCAG 8105 0.0 32.36321 6 GTACATG 13750 0.0 28.718224 1 ACGCAGA 9500 0.0 27.074907 7 TACATGG 14435 0.0 26.690466 2 ACATGGG 14935 0.0 24.906061 3 CGCAGAG 10275 0.0 24.675306 8 CATGGGG 10370 0.0 21.849304 4 GCAGAGT 12055 0.0 19.700705 9 GAGTACA 10350 0.0 19.165047 1 AGTACAT 10075 0.0 18.027843 2 AGAGTAC 10080 0.0 17.784508 10-11 ATGGGGA 6305 0.0 17.386103 5 CAGAGTA 11050 0.0 15.93289 10-11 TAATACT 2225 0.0 15.460399 4 >>END_MODULE