##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920887_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3125906 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.248446050521032 31.0 30.0 34.0 27.0 34.0 2 30.2582985540832 31.0 30.0 34.0 26.0 34.0 3 30.394892552751106 31.0 30.0 34.0 27.0 34.0 4 34.04324730174228 35.0 35.0 37.0 30.0 37.0 5 33.575108464553956 35.0 35.0 37.0 28.0 37.0 6 33.51992414359229 35.0 35.0 37.0 28.0 37.0 7 33.33594996138719 35.0 33.0 37.0 27.0 37.0 8 33.2697998596247 35.0 33.0 37.0 27.0 37.0 9 34.590765685212546 38.0 34.0 39.0 27.0 39.0 10-11 34.40322101816241 37.5 34.0 39.0 27.0 39.0 12-13 34.22122610212847 37.0 34.0 39.0 26.5 39.0 14-15 35.114726098609495 38.0 34.0 40.0 26.0 41.0 16-17 34.98946129538125 38.0 34.0 40.0 25.5 41.0 18-19 34.907450351993944 38.0 34.0 40.0 25.0 41.0 20-21 34.79152939979642 38.0 34.0 40.0 25.0 41.0 22-23 34.64542951707441 38.0 34.0 40.0 24.5 41.0 24-25 34.46754524928133 38.0 33.0 40.0 24.0 41.0 26-27 34.28615703735173 38.0 33.0 40.0 23.0 41.0 28-29 34.224088952131 38.0 33.0 40.0 23.5 41.0 30-31 34.207206166788126 38.0 33.0 40.0 23.0 41.0 32-33 34.056017999261655 38.0 33.0 40.0 22.5 41.0 34-35 33.89006483240379 38.0 33.0 40.0 21.5 41.0 36-37 33.688209914181684 38.0 33.0 40.0 19.5 41.0 38-39 33.508902219068645 38.0 32.0 40.0 18.5 41.0 40-41 33.28158860183255 38.0 32.0 40.0 17.0 41.0 42-43 33.31453936874621 38.0 32.0 40.0 17.0 41.0 44-45 33.171448213733875 38.0 32.0 40.0 15.5 41.0 46-47 32.920510245669576 37.5 32.0 40.0 14.5 41.0 48-49 32.663122947395095 37.0 31.0 40.0 11.0 41.0 50-51 32.403115768676344 37.0 31.0 40.0 9.0 41.0 52-53 32.14265656100983 37.0 31.0 40.0 8.0 41.0 54-55 31.860317776670186 36.0 30.0 40.0 7.0 41.0 56-57 31.53220346357184 36.0 30.0 39.0 4.0 41.0 58-59 31.202533121597387 35.5 29.5 39.0 2.0 40.0 60-61 30.86947160279292 35.0 29.0 39.0 2.0 40.0 62-63 30.54059111182486 35.0 29.0 39.0 2.0 40.0 64-65 30.13359182905692 35.0 28.0 38.0 2.0 40.0 66-67 29.697067506188606 34.0 28.0 38.0 2.0 40.0 68-69 29.25955067106944 34.0 28.0 37.0 2.0 39.5 70-71 28.8354849761957 34.0 26.5 36.5 2.0 39.0 72-73 28.39282835120442 34.0 26.0 36.0 2.0 39.0 74-75 27.95468049902972 33.0 26.0 35.5 2.0 38.5 76-77 26.50080792576616 31.5 24.5 34.0 2.0 36.0 78-79 27.342462153372495 33.0 26.0 35.0 2.0 37.0 80-81 27.36882123134861 33.0 26.0 35.0 2.0 36.5 82-83 27.034787034542944 33.0 25.5 35.0 2.0 36.0 84-85 26.71571537979709 33.0 25.0 35.0 2.0 36.0 86-87 26.176757074588934 32.5 24.0 35.0 2.0 35.0 88-89 25.812654155307293 32.0 23.0 35.0 2.0 35.0 90-91 25.44656733119934 32.0 20.5 34.5 2.0 35.0 92-93 25.13936247603095 32.0 19.5 34.0 2.0 35.0 94-95 24.744259424307707 32.0 17.5 34.0 2.0 35.0 96-97 24.204291811717948 31.5 6.0 34.0 2.0 35.0 98-99 23.59573400479733 31.0 2.0 34.0 2.0 35.0 100-101 21.43625144198194 28.0 2.0 33.0 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 73303.0 3 32612.0 4 17804.0 5 12556.0 6 10685.0 7 10776.0 8 12310.0 9 14166.0 10 16052.0 11 17693.0 12 19587.0 13 21342.0 14 23216.0 15 25084.0 16 26712.0 17 27466.0 18 26684.0 19 25540.0 20 25776.0 21 27271.0 22 29513.0 23 33728.0 24 38889.0 25 46449.0 26 54718.0 27 64680.0 28 76304.0 29 89453.0 30 105714.0 31 125141.0 32 149824.0 33 183721.0 34 230408.0 35 299033.0 36 396151.0 37 460004.0 38 259078.0 39 16463.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 42.20361466982509 19.423874538118575 13.932769871918346 24.439740920137982 2 16.140920424350572 20.707308537108922 38.27623095512149 24.875540083419015 3 19.30757232784892 24.753409427216226 29.031602690747953 26.907415554186898 4 13.897116932065051 16.72019427353791 35.716159706158074 33.66652908823897 5 14.664128154957137 37.227470441972336 33.5522805014915 14.556120901579032 6 33.354416961357074 35.10613017960689 17.192358908895027 14.34709395014101 7 29.411745860371536 31.577984561192174 20.632577838791168 18.377691739645122 8 26.854379940806417 34.20008584350857 19.97847506053889 18.967059155146128 9 27.174874502905276 15.551291781506107 19.338069902898937 37.93576381268968 10-11 25.91447351774884 25.440938473753477 27.243782630600066 21.40080537789762 12-13 26.60841798129231 22.705873498075903 27.200011530164993 23.485696990466796 14-15 23.917538650754757 24.172583987521577 24.806081628600438 27.103795733123228 16-17 23.828041529846473 27.165363090040824 25.40950819960769 23.597087180505014 18-19 23.80476397518312 26.416008027257842 26.865604263104004 22.913623734455033 20-21 24.953791556596084 25.53050301316975 26.35024583963994 23.16545959059423 22-23 24.358140856569957 25.504508578907135 26.237263714844893 23.900086849678015 24-25 24.08200507642242 25.59633719109214 26.390354445294655 23.93130328719078 26-27 23.997420422201785 25.80719048507779 26.365026584889335 23.83036250783109 28-29 23.86029903003662 25.8942857531478 26.366569827682078 23.8788453891335 30-31 24.232200078205548 25.787335309164703 26.109293212564854 23.871171400064895 32-33 24.014085036640648 25.731016889787483 26.065574111488885 24.18932396208298 34-35 24.332953957512682 25.670773673899124 26.126952566930186 23.869319801658012 36-37 24.32946007862984 25.609430844828385 25.99974817204745 24.06136090449433 38-39 24.162565852370683 25.521606777844003 26.154957578472825 24.160869791312486 40-41 24.302801338119693 25.47622396049574 26.189249956361838 24.03172474502273 42-43 24.255557205073632 25.418110172734405 26.043803663551213 24.28252895864075 44-45 24.03478852442046 25.418044843072284 26.201167436013495 24.345999196493757 46-47 24.077493830437724 25.340880016474564 26.097420440528268 24.484205712559444 48-49 23.96713926699226 25.42742788219278 26.117884000428717 24.487548850386244 50-51 23.871664426953352 25.554952966020352 26.12900748704166 24.44437511998464 52-53 24.044173975860982 25.439675412105466 26.122325447545684 24.393825164487865 54-55 23.793255865926792 25.35136529945018 26.243354434581622 24.612024400041403 56-57 23.81302393643483 25.357475692932578 26.054911209740293 24.774589160892297 58-59 23.608356690147716 25.384935550548455 26.231091537704316 24.775616221599517 60-61 23.728051018432744 25.44801921190857 26.15144257306461 24.67248719659408 62-63 23.55158743489602 25.413355678007616 26.133686676092125 24.901370211004238 64-65 23.363972743663457 25.328486781265454 26.11640075203353 25.19113972303756 66-67 23.444432158390036 25.41667460103972 25.960185822750216 25.17870741782003 68-69 23.543204079270332 25.298033835631944 25.922927868134888 25.23583421696284 70-71 23.325742367063164 25.096937609872754 26.005085744747706 25.572234278316376 72-73 23.28166606923392 25.1468564369111 25.970433480131096 25.601044013723882 74-75 23.210688998063326 25.165758845314638 25.94782520712751 25.67572694949452 76-77 23.152864965405552 25.06469121549575 26.07359838372177 25.708845435376933 78-79 23.200629840788466 25.092313361800823 25.97870733438584 25.72834946302487 80-81 23.044368104904244 25.141579486168737 25.96929094190454 25.844761467022487 82-83 22.972306923453107 25.08243005942835 25.985877268436365 25.959385748682184 84-85 22.87551858125862 24.995244722041406 25.949755789080985 26.179480907618984 86-87 22.883697374088964 24.975984183399692 25.955059711579263 26.18525873093208 88-89 22.70197169532834 24.947069175927346 25.969727785712976 26.381231343031335 90-91 22.65603899507365 24.9267687605733 25.977667519266905 26.439524725086144 92-93 22.7330485076831 24.798548133993904 25.9231792603779 26.5452240979451 94-95 22.529492974999133 24.80826547092547 25.95828075466314 26.703960799412258 96-97 22.453394484934737 24.707309383391397 26.031585360918307 26.807710770755556 98-99 22.301846066385707 24.681550389283284 25.99821774110602 27.01838580322499 100-101 22.387412217376824 24.671000118051253 26.007170733782907 26.934416930789013 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 96.0 1 67.0 2 65.5 3 106.0 4 100.5 5 101.5 6 157.5 7 328.5 8 499.0 9 518.0 10 472.0 11 454.5 12 465.5 13 486.5 14 532.0 15 595.0 16 661.0 17 739.0 18 835.0 19 913.0 20 1037.0 21 1236.5 22 1469.5 23 1687.0 24 1986.5 25 2493.5 26 3168.0 27 3976.0 28 4930.0 29 6512.5 30 8905.5 31 12696.0 32 18400.5 33 25127.0 34 31945.5 35 39316.5 36 48219.0 37 57377.0 38 65577.0 39 73553.0 40 82266.5 41 90637.5 42 97868.5 43 106135.0 44 114476.5 45 121324.0 46 128575.0 47 136265.0 48 143237.5 49 147128.5 50 147106.0 51 144252.5 52 139132.0 53 135063.0 54 131307.5 55 124375.5 56 114007.5 57 103477.0 58 95204.0 59 84420.5 60 70620.5 61 57791.0 62 46998.5 63 36234.5 64 26625.0 65 20312.5 66 15385.5 67 11848.5 68 9114.0 69 6577.0 70 5050.0 71 4009.0 72 3092.5 73 2551.5 74 1901.0 75 1351.0 76 982.0 77 617.5 78 354.0 79 201.0 80 110.0 81 59.0 82 42.5 83 24.5 84 15.0 85 9.0 86 4.5 87 2.0 88 0.5 89 1.5 90 1.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.5 97 0.5 98 0.5 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.18513032701559165 2 0.0 3 0.01218846631984455 4 0.013308141703557305 5 0.006078237797297807 6 0.10940828035136053 7 0.14558979060790694 8 0.12623540183230078 9 0.144566087399941 10-11 0.1166061935323711 12-13 0.11711804513635407 14-15 0.11887753502504554 16-17 0.06809225869235991 18-19 0.0815123679342885 20-21 0.03859681001284108 22-23 0.08616701845800864 24-25 0.059358790699400435 26-27 0.06842816130747374 28-29 0.04169991036198785 30-31 0.025848506001140147 32-33 0.032934451643779436 34-35 0.019098462973614692 36-37 0.024200983650819956 38-39 0.03258255366604114 40-41 0.024776816705300797 42-43 0.013244160253059434 44-45 0.027272093274717794 46-47 0.034853895158715585 48-49 0.009309301047440325 50-51 0.01618730697596153 52-53 0.007021964192141415 54-55 0.013420109241928579 56-57 0.005406432567070155 58-59 0.003934859205619107 60-61 0.024344941914440164 62-63 0.010524948606899887 64-65 0.007917704499111618 66-67 0.042083799064975086 68-69 0.09266113568354263 70-71 0.02239350767425508 72-73 0.04561877420498249 74-75 0.08859831357692778 76-77 0.2441212243746293 78-79 0.08244009896650763 80-81 0.01732297772229875 82-83 0.012076498781473275 84-85 0.01380399794491581 86-87 0.2613322345585568 88-89 0.6235952072775062 90-91 0.268210240487078 92-93 0.35247381079277496 94-95 0.0011036800210882862 96-97 0.003918863842994639 98-99 0.0031190957117712436 100-101 0.004638655161095695 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3125906.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.93189014017179 #Duplication Level Percentage of deduplicated Percentage of total 1 69.86220551586779 34.18489765252546 2 13.319772331299212 13.035232728144658 3 6.050588219203428 8.882001540764396 4 3.277532579718873 6.415034564865508 5 2.0371732242745506 4.984136820335093 6 1.3340252332273268 3.916582569389796 7 0.8943012333256438 3.063189479091738 8 0.6641719901086715 2.5999352683341423 9 0.492457891766119 2.168720591270431 >10 1.9733133841769284 15.709420918681685 >50 0.06647319282848518 2.2289827722738504 >100 0.02693442349958024 2.288346825336232 >500 6.567379397993064E-4 0.2004929397696487 >1k 3.940427635287644E-4 0.32302532921733146 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 3.199072524893583E-5 0.0 0.0 0.0 6 0.0 3.199072524893583E-5 0.0 0.0 0.0 7 0.0 3.199072524893583E-5 0.0 3.199072524893583E-5 0.0 8 0.0 3.199072524893583E-5 0.0 3.199072524893583E-5 0.0 9 0.0 3.199072524893583E-5 0.0 3.199072524893583E-5 0.0 10-11 0.0 4.798608787340374E-5 0.0 3.199072524893583E-5 0.0 12-13 3.199072524893583E-5 7.997681312233957E-5 0.0 9.597217574680748E-5 0.0 14-15 3.199072524893583E-5 9.597217574680748E-5 0.0 1.5995362624467914E-4 0.0 16-17 3.199072524893583E-5 1.119675383712754E-4 0.0 1.9194435149361497E-4 0.0 18-19 3.199072524893583E-5 1.5995362624467914E-4 0.0 1.9194435149361497E-4 0.0 20-21 3.199072524893583E-5 2.559258019914866E-4 0.0 2.079397141180829E-4 0.0 22-23 3.199072524893583E-5 3.199072524893583E-4 0.0 3.5189797773829413E-4 0.0 24-25 3.199072524893583E-5 3.199072524893583E-4 0.0 0.00115166610896169 0.0 26-27 3.199072524893583E-5 3.199072524893583E-4 0.0 0.0025432626572903985 0.0 28-29 3.199072524893583E-5 3.6789334036276206E-4 0.0 0.00820562102635204 0.0 30-31 3.199072524893583E-5 4.638655161095695E-4 0.0 0.029959314195628403 0.0 32-33 3.199072524893583E-5 5.438423292319091E-4 0.0 0.07746554119029811 0.0 34-35 3.199072524893583E-5 5.75833054480845E-4 0.0 0.14573374887152718 3.199072524893583E-5 36-37 3.199072524893583E-5 5.918284171053128E-4 0.0 0.2589329301648866 3.199072524893583E-5 38-39 3.199072524893583E-5 6.078237797297807E-4 0.0 0.44745427405686544 3.199072524893583E-5 40-41 3.199072524893583E-5 6.078237797297807E-4 0.0 0.6623999570044653 3.199072524893583E-5 42-43 3.199072524893583E-5 6.078237797297807E-4 0.0 0.8833279055736161 3.199072524893583E-5 44-45 3.199072524893583E-5 6.078237797297807E-4 0.0 1.1550091397502036 3.199072524893583E-5 46-47 3.199072524893583E-5 6.078237797297807E-4 0.0 1.474644471074946 3.199072524893583E-5 48-49 3.199072524893583E-5 6.078237797297807E-4 0.0 1.8172811338536732 3.199072524893583E-5 50-51 3.199072524893583E-5 6.238191423542487E-4 0.0 2.1826632022843935 6.398145049787166E-5 52-53 3.199072524893583E-5 6.398145049787166E-4 0.0 2.5541075131497877 6.398145049787166E-5 54-55 3.199072524893583E-5 6.398145049787166E-4 0.0 2.9713305518464086 6.398145049787166E-5 56-57 3.199072524893583E-5 6.718052302276524E-4 0.0 3.462084272527709 6.398145049787166E-5 58-59 3.199072524893583E-5 7.197913181010561E-4 0.0 3.9886836008504414 6.398145049787166E-5 60-61 3.199072524893583E-5 7.997681312233957E-4 0.0 4.538700140055395 6.398145049787166E-5 62-63 3.199072524893583E-5 8.317588564723316E-4 0.0 5.098121952483536 6.398145049787166E-5 64-65 3.199072524893583E-5 8.317588564723316E-4 0.0 5.6959486305730245 6.398145049787166E-5 66-67 3.199072524893583E-5 8.637495817212673E-4 0.0 6.369641313590364 6.398145049787166E-5 68-69 3.199072524893583E-5 8.957403069702032E-4 0.0 7.112641902859523 6.398145049787166E-5 70-71 3.199072524893583E-5 8.957403069702032E-4 0.0 7.900221567763074 6.398145049787166E-5 72-73 3.199072524893583E-5 0.0010077078453414787 0.0 8.699157940129998 6.398145049787166E-5 74-75 3.199072524893583E-5 0.0010556939332148824 0.0 9.52035985727018 9.597217574680748E-5 76-77 3.199072524893583E-5 0.001119675383712754 0.0 10.404103642272032 1.279629009957433E-4 78-79 3.199072524893583E-5 0.001119675383712754 0.0 11.362705724356395 1.279629009957433E-4 80-81 3.199072524893583E-5 0.0011676614715861577 0.0 12.369597806204025 1.279629009957433E-4 82-83 3.199072524893583E-5 0.0011996521968350936 0.0 13.397203882650341 1.279629009957433E-4 84-85 3.199072524893583E-5 0.0012156475594595614 0.0 14.419883387408323 1.279629009957433E-4 86-87 3.199072524893583E-5 0.0012476382847084974 0.0 15.478216555456243 1.279629009957433E-4 88-89 3.199072524893583E-5 0.001279629009957433 0.0 16.602354645341222 1.279629009957433E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3765 0.0 44.462887 1 GTATCAA 6900 0.0 41.69906 1 ATCAACG 9260 0.0 30.656055 3 TCAACGC 9320 0.0 30.356829 4 TATCAAC 9420 0.0 30.233725 2 CAACGCA 9450 0.0 29.734474 5 AACGCAG 10020 0.0 28.185102 6 GTACATG 13715 0.0 24.168903 1 TACATGG 13975 0.0 23.436274 2 ACGCAGA 11670 0.0 23.345943 7 CGCAGAG 11850 0.0 22.868593 8 ACATGGG 14340 0.0 22.609846 3 GCAGAGT 13125 0.0 19.851564 9 AGAGTAC 10970 0.0 19.29353 10-11 CATGGGG 8560 0.0 18.799747 4 GAGTACA 10725 0.0 17.20499 1 AGTACAT 10325 0.0 16.73411 2 CATGGGA 5590 0.0 16.474642 4 CAGAGTA 12280 0.0 16.269236 10-11 GTGGTAT 2200 0.0 16.21282 1 >>END_MODULE