##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920886_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4847211 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.318077962770758 31.0 30.0 34.0 27.0 34.0 2 30.327433652052697 31.0 30.0 34.0 26.0 34.0 3 30.469581786309693 31.0 30.0 34.0 27.0 34.0 4 34.11712405339895 35.0 35.0 37.0 30.0 37.0 5 33.65151919320203 35.0 35.0 37.0 28.0 37.0 6 33.59873915123563 35.0 35.0 37.0 28.0 37.0 7 33.417949208317935 35.0 35.0 37.0 28.0 37.0 8 33.35076830779597 35.0 35.0 37.0 27.0 37.0 9 34.68894834576007 38.0 35.0 39.0 27.0 39.0 10-11 34.50604079335518 38.0 34.0 39.0 27.0 39.0 12-13 34.327104493697504 37.0 34.0 39.0 27.0 39.0 14-15 35.235100040002386 38.0 34.0 40.0 27.0 41.0 16-17 35.117525418225036 38.0 34.0 40.0 26.0 41.0 18-19 35.02983138138612 38.5 34.0 40.0 25.5 41.0 20-21 34.91449546966287 38.0 34.0 40.0 25.0 41.0 22-23 34.76840785350586 38.0 34.0 40.0 25.0 41.0 24-25 34.595177412330514 38.0 33.5 40.0 24.0 41.0 26-27 34.41470177386543 38.0 33.0 40.0 24.0 41.0 28-29 34.36237034038749 38.0 33.0 40.0 23.5 41.0 30-31 34.3545810157635 38.0 33.0 40.0 24.0 41.0 32-33 34.209419705475995 38.0 33.0 40.0 23.0 41.0 34-35 34.04364427296439 38.0 33.0 40.0 22.5 41.0 36-37 33.85620081320991 38.0 33.0 40.0 21.0 41.0 38-39 33.68241716731539 38.0 33.0 40.0 19.5 41.0 40-41 33.45450816974957 38.0 32.0 40.0 18.5 41.0 42-43 33.49078335975059 38.0 32.0 40.0 18.0 41.0 44-45 33.34884689360541 38.0 32.0 40.0 17.0 41.0 46-47 33.10513612879654 38.0 32.0 40.0 15.0 41.0 48-49 32.851342865000106 37.0 31.5 40.0 13.5 41.0 50-51 32.6006942961633 37.0 31.0 40.0 10.5 41.0 52-53 32.343169814559346 37.0 31.0 40.0 9.0 41.0 54-55 32.067467353907226 36.5 31.0 40.0 8.0 41.0 56-57 31.74063951414535 36.0 30.0 39.0 7.0 41.0 58-59 31.41277282957148 36.0 30.0 39.0 4.0 40.5 60-61 31.08480557169886 35.0 29.0 39.0 2.0 40.0 62-63 30.76806054038085 35.0 29.0 39.0 2.0 40.0 64-65 30.36537320120787 35.0 29.0 38.0 2.0 40.0 66-67 29.934465200710264 34.5 28.0 38.0 2.0 40.0 68-69 29.491597745590195 34.0 28.0 37.0 2.0 39.5 70-71 29.06229190352968 34.0 27.5 36.5 2.0 39.0 72-73 28.61589901904415 34.0 26.5 36.0 2.0 39.0 74-75 28.168097489463527 33.5 26.0 35.5 2.0 38.5 76-77 26.699223223416517 31.5 25.0 34.5 2.0 36.0 78-79 27.54499267723233 33.0 26.0 35.0 2.0 37.0 80-81 27.575012930115896 33.0 26.0 35.0 2.0 36.5 82-83 27.245779480200056 33.0 26.0 35.0 2.0 36.0 84-85 26.925288996084554 33.0 25.5 35.0 2.0 36.0 86-87 26.387495716608996 33.0 24.5 35.0 2.0 35.0 88-89 26.022348934263434 32.0 23.5 35.0 2.0 35.0 90-91 25.662350060684382 32.0 22.0 35.0 2.0 35.0 92-93 25.362951189869804 32.0 20.0 34.0 2.0 35.0 94-95 24.98871485066361 32.0 19.0 34.0 2.0 35.0 96-97 24.46191191181898 32.0 12.0 34.0 2.0 35.0 98-99 23.866634441950225 31.5 2.0 34.0 2.0 35.0 100-101 21.658814935021397 28.0 2.0 33.0 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 106681.0 3 49260.0 4 26673.0 5 18929.0 6 16224.0 7 16067.0 8 18136.0 9 21544.0 10 24207.0 11 26823.0 12 29862.0 13 32617.0 14 35108.0 15 37742.0 16 39998.0 17 41113.0 18 40338.0 19 39237.0 20 39142.0 21 41242.0 22 44480.0 23 50525.0 24 58645.0 25 69827.0 26 83089.0 27 98268.0 28 117019.0 29 136674.0 30 161849.0 31 192679.0 32 230998.0 33 281129.0 34 354971.0 35 462142.0 36 621547.0 37 734714.0 38 419413.0 39 28299.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.413418611448385 19.075996657997468 13.693342742533929 24.817241988020218 2 16.10552955091082 20.444911517159042 38.19951308082112 25.25004585110902 3 19.318684742363548 24.091378486812037 29.11645248114421 27.4734842896802 4 13.900695113161962 16.273909538519057 35.80359963347116 34.021795714847826 5 14.722336843495196 36.77483246954742 33.93030155481465 14.572529132142739 6 33.86383875465913 35.08865552882709 16.83926352798118 14.208242188532608 7 29.643182158591447 31.33883904822407 20.65899172076832 18.35898707241616 8 26.835436239947203 34.56209728142044 19.776011269665368 18.826455208966987 9 26.804487698618633 15.800821083737981 19.28094434546338 38.11374687218 10-11 25.787380595858934 25.310362988588835 27.49359219290546 21.40866422264677 12-13 26.420942047641134 22.561406628558636 27.401401328834556 23.616249994965674 14-15 23.561838068884466 24.14643125830359 24.880632304123125 27.411098368688826 16-17 23.747343791948786 27.116840537097215 25.594796035942043 23.541019635011956 18-19 23.700116662384264 26.43434806518104 26.937438467328185 22.92809680510651 20-21 24.546616358639206 25.721349731425097 26.577188133483094 23.154845776452603 22-23 24.17931902526287 25.475560338401987 26.52049229915383 23.824628337181313 24-25 23.89436465484303 25.655700295408568 26.58973300936303 23.86020204038537 26-27 23.785982616971083 25.874278825187584 26.49250607827988 23.847232479561445 28-29 23.832692423783534 26.00925324449173 26.399887314118605 23.758167017606137 30-31 24.084736791603085 25.774561422514967 26.260594936303995 23.880106849577956 32-33 23.859044468121592 25.84278647992123 26.158527663777324 24.139641388179847 34-35 24.209029883638202 25.830309698357333 26.19610693928354 23.764553478720927 36-37 24.279637190173883 25.589524696841664 26.148225415878656 23.982612697105797 38-39 24.04346217319946 25.703510987299953 26.22456756266495 24.02845927683563 40-41 24.2030571594156 25.558268311956923 26.30376444905623 23.934910079571246 42-43 24.04652132063851 25.49152549367133 26.243558622084162 24.218394563605997 44-45 23.999697067841634 25.568041647806496 26.253116120520364 24.17914516383151 46-47 24.017912927282907 25.535011982365674 26.180073416173745 24.267001674177678 48-49 23.807124586648015 25.637102360677623 26.17181515874109 24.383957893933275 50-51 23.86641273745253 25.69381584010713 26.209858877394897 24.22991254504544 52-53 23.935917911677972 25.494168719363003 26.227341853321224 24.3425715156378 54-55 23.702260706081592 25.44860114188162 26.32063655521201 24.528501596824775 56-57 23.60654956417183 25.57570395910525 26.222931850952936 24.59481462576999 58-59 23.520226661905 25.40159020664764 26.311320118265918 24.76686301318144 60-61 23.52945728292111 25.368782207247687 26.43586572689719 24.665894782934007 62-63 23.405719558166282 25.412257746445015 26.372106040834947 24.809916654553753 64-65 23.258379976731426 25.335468314571784 26.258948796143333 25.147202912553457 66-67 23.274540577650924 25.385494984672246 26.180224471299123 25.159739966377703 68-69 23.42027830374713 25.234094790115858 26.201312847027925 25.144314059109092 70-71 23.223987534151753 25.152632459181167 26.1992049235272 25.424175083139872 72-73 23.28087494401572 25.14607511490967 26.11016055363036 25.46288938744425 74-75 23.17735336834381 25.348452919418506 26.01570846243394 25.458485249803743 76-77 23.208819303974604 25.10711268783175 26.23182046948722 25.452247538706423 78-79 23.193649629565854 25.187240457111383 26.103864436567008 25.515245476755755 80-81 23.10836251629032 25.25231943638583 26.027456052241277 25.611861995082574 82-83 23.08173288607055 25.184528911214432 26.10165420930594 25.632083993409076 84-85 23.043721371683244 25.1583997028845 26.012039367804235 25.785839557628027 86-87 22.97750519707516 25.150430762547966 26.083980597586077 25.788083442790803 88-89 22.936714557750484 25.066569983544078 25.948550905304028 26.048164553401403 90-91 22.799274242850636 25.08669380757631 26.00978673773237 26.10424521184068 92-93 22.784511634989364 24.944124909281584 26.068883161720123 26.20248029400892 94-95 22.679367331057357 24.824752617415438 26.13118064478328 26.364699406743924 96-97 22.69665494465139 24.75965054709042 26.141483245839442 26.402211262418753 98-99 22.636649818904697 24.79132855178327 25.997829393999446 26.574192235312587 100-101 22.778446869450445 24.63204456821064 26.04790329593698 26.54160526640193 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 106.0 1 85.0 2 102.5 3 150.5 4 143.0 5 163.0 6 277.5 7 573.0 8 883.5 9 930.0 10 773.5 11 675.5 12 696.5 13 752.0 14 847.5 15 934.0 16 981.5 17 1117.0 18 1328.5 19 1484.5 20 1681.0 21 1915.5 22 2231.5 23 2692.5 24 3227.5 25 4002.0 26 5170.5 27 6746.0 28 8724.0 29 11809.5 30 16265.5 31 22842.0 32 31737.5 33 41126.5 34 51328.5 35 62925.0 36 76829.5 37 91878.5 38 104936.5 39 116143.0 40 128069.5 41 140978.0 42 152650.0 43 164369.5 44 176900.0 45 189037.5 46 199331.5 47 206879.0 48 214522.0 49 221197.0 50 223246.5 51 222052.5 52 218681.5 53 214259.0 54 207678.5 55 196281.5 56 179948.0 57 160875.5 58 143977.5 59 127229.5 60 107991.5 61 89041.0 62 71888.5 63 55296.5 64 40608.0 65 30106.5 66 22544.5 67 16938.0 68 12522.0 69 9272.0 70 6967.0 71 5090.5 72 3761.5 73 3073.0 74 2445.5 75 1777.5 76 1147.0 77 649.5 78 371.0 79 181.0 80 91.0 81 48.5 82 25.5 83 14.0 84 10.0 85 8.5 86 5.5 87 3.5 88 2.0 89 1.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.19378153746556526 2 0.0 3 0.011470513662392663 4 0.013657338209539465 5 0.006828669104769733 6 0.10519451288586365 7 0.13999803185790757 8 0.12163695782997687 9 0.13985361891611484 10-11 0.11266272501857252 12-13 0.11242547518562737 14-15 0.11457103889226197 16-17 0.06466605229275144 18-19 0.07731249990974191 20-21 0.03565968141267215 22-23 0.0820471813585173 24-25 0.05640356898018263 26-27 0.06433596556865381 28-29 0.038857396552367945 30-31 0.02364246161349279 32-33 0.03032671777646981 34-35 0.019537007982528512 36-37 0.02364246161349279 38-39 0.03053302197903083 40-41 0.024271689431303898 42-43 0.012708338877758777 44-45 0.025612666747950524 46-47 0.03194620576657381 48-49 0.008324374573337122 50-51 0.014771380903368967 52-53 0.006890560365538038 54-55 0.011583980973801223 56-57 0.004786257499415643 58-59 0.003465910603025121 60-61 0.02182698463095582 62-63 0.00939715642665442 64-65 0.00680803868451363 66-67 0.03949693958030711 68-69 0.08873143752149432 70-71 0.02084703966879098 72-73 0.04334451295807012 74-75 0.08435778842720072 76-77 0.24755472786309488 78-79 0.07922081378343133 80-81 0.01598857569847898 82-83 0.01124357903957554 84-85 0.012605186776478268 86-87 0.2632647928881165 88-89 0.6209756497086675 90-91 0.26430662911104963 92-93 0.3510781767082143 94-95 0.0012997164761344203 96-97 0.004249866572756994 98-99 0.0036618995954580892 100-101 0.005332963636202344 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4847211.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.339939681801525 #Duplication Level Percentage of deduplicated Percentage of total 1 72.1224141472043 37.02760392023377 2 13.428103040553708 13.78796000286086 3 5.521091437370383 8.50357504116919 4 2.8493294742563906 5.8513761336760926 5 1.6427771064276835 4.217003877732085 6 1.0446458662588816 3.2179233457544565 7 0.6887070074240701 2.475072335371005 8 0.4831999313533946 1.9845964263947131 9 0.36464985764934305 1.6848991527025305 >10 1.7442222023279028 15.459481144686146 >50 0.08293323798587561 2.8959094660842823 >100 0.026474435562238455 2.188570024723289 >500 0.0010891922963510924 0.3851993403544549 >1k 3.630633294998153E-4 0.3208297882571086 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.650433620488153E-4 2 0.0 0.0 0.0 0.0 1.650433620488153E-4 3 0.0 0.0 0.0 0.0 1.650433620488153E-4 4 0.0 0.0 0.0 0.0 1.650433620488153E-4 5 0.0 2.0630420256101912E-5 0.0 0.0 1.650433620488153E-4 6 0.0 2.0630420256101912E-5 0.0 0.0 2.2693462281712102E-4 7 0.0 2.0630420256101912E-5 0.0 0.0 2.4756504307322293E-4 8 0.0 2.0630420256101912E-5 0.0 0.0 2.4756504307322293E-4 9 0.0 2.0630420256101912E-5 0.0 0.0 2.4756504307322293E-4 10-11 0.0 2.0630420256101912E-5 0.0 2.0630420256101912E-5 2.681954633293248E-4 12-13 0.0 5.1576050640254775E-5 0.0 2.0630420256101912E-5 7.942711798599237E-4 14-15 0.0 6.189126076830573E-5 0.0 4.1260840512203824E-5 9.799449621648408E-4 16-17 1.0315210128050956E-5 6.189126076830573E-5 0.0 5.1576050640254775E-5 0.001144988324213656 18-19 2.0630420256101912E-5 6.189126076830573E-5 0.0 8.252168102440763E-5 0.0012481404254941655 20-21 2.0630420256101912E-5 6.189126076830573E-5 0.0 1.4441294179271338E-4 0.0015163358888234905 22-23 2.0630420256101912E-5 6.189126076830573E-5 0.0 2.1661941268907007E-4 0.001588542359719847 24-25 2.0630420256101912E-5 6.189126076830573E-5 0.0 8.355320203721273E-4 0.001588542359719847 26-27 2.0630420256101912E-5 6.189126076830573E-5 0.0 0.0017020096711284076 0.0016710640407442546 28-29 2.0630420256101912E-5 7.220647089635669E-5 0.0 0.006983397256690496 0.0017432705116406115 30-31 2.0630420256101912E-5 8.252168102440765E-5 0.0 0.030254511305573453 0.0017845313521528154 32-33 2.0630420256101912E-5 8.252168102440765E-5 0.0 0.0820265509382612 0.001867053033177223 34-35 2.0630420256101912E-5 9.28368911524586E-5 0.0 0.1509115241733855 0.002093987655994344 36-37 2.0630420256101912E-5 1.0315210128050955E-4 0.0 0.26483270482758026 0.002104302866122395 38-39 2.0630420256101912E-5 1.0315210128050955E-4 0.0 0.4522807032745222 0.0021455637066345986 40-41 2.0630420256101912E-5 1.0315210128050955E-4 0.0 0.6701379411789583 0.0021455637066345986 42-43 2.0630420256101912E-5 1.0315210128050955E-4 0.0 0.9013121153587084 0.0021455637066345986 44-45 2.0630420256101912E-5 1.0315210128050955E-4 0.0 1.1815144832770845 0.002166194126890701 46-47 2.0630420256101912E-5 1.1346731140856051E-4 0.0 1.50813529677169 0.002217770177530955 48-49 2.0630420256101912E-5 1.2378252153661147E-4 0.0 1.857552724649288 0.0023002918585553634 50-51 2.0630420256101912E-5 1.2378252153661147E-4 0.0 2.2298080277503907 0.0024550200104761274 52-53 2.0630420256101912E-5 1.2378252153661147E-4 0.0 2.613399746782222 0.0027438458940615544 54-55 2.0630420256101912E-5 1.6504336204881527E-4 0.0 3.040160620199946 0.00280573715482986 56-57 2.0630420256101912E-5 1.8567378230491719E-4 0.0 3.5297514385076285 0.002888258835854267 58-59 2.0630420256101912E-5 2.063042025610191E-4 0.0 4.05999449992996 0.002950150096622573 60-61 2.0630420256101912E-5 2.063042025610191E-4 0.0 4.621492648040285 0.0029707805168786754 62-63 2.0630420256101912E-5 2.063042025610191E-4 0.0 5.191954713751888 0.003238975980208 64-65 2.0630420256101912E-5 2.681954633293248E-4 0.0 5.802955555266729 0.0032699216105921526 66-67 2.0630420256101912E-5 2.681954633293248E-4 0.0 6.489422474078392 0.003321497661232408 68-69 2.0630420256101912E-5 2.681954633293248E-4 0.0 7.237945697020411 0.003352443291616561 70-71 2.0630420256101912E-5 2.785106734573758E-4 0.0 8.02144779750665 0.003445280182769019 72-73 4.1260840512203824E-5 2.8882588358542676E-4 0.0 8.830253108436995 0.0036618995954580892 74-75 4.1260840512203824E-5 2.8882588358542676E-4 0.0 9.666548454358598 0.0038475733777630066 76-77 4.1260840512203824E-5 2.8882588358542676E-4 0.0 10.57916604001765 0.003919779848659363 78-79 4.1260840512203824E-5 2.8882588358542676E-4 0.0 11.558450828734298 0.003981671109427669 80-81 4.1260840512203824E-5 2.8882588358542676E-4 0.0 12.56484398966746 0.004053877580324026 82-83 4.1260840512203824E-5 2.8882588358542676E-4 0.0 13.590825734633793 0.0042189209423728405 84-85 4.1260840512203824E-5 2.8882588358542676E-4 0.0 14.633404652696157 0.004291127413269197 86-87 4.1260840512203824E-5 2.8882588358542676E-4 0.0 15.709807144768405 0.00442522514493386 88-89 4.1260840512203824E-5 2.8882588358542676E-4 0.0 16.84770891962409 0.004559322876598522 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 4355 0.0 49.35774 1 GTATCAA 8155 0.0 42.453384 1 TCAACGC 10580 0.0 31.988316 4 ATCAACG 10820 0.0 31.498125 3 TATCAAC 11085 0.0 31.000448 2 CAACGCA 10890 0.0 30.942804 5 AACGCAG 11805 0.0 28.705551 6 GTACATG 16470 0.0 24.398779 1 TACATGG 16800 0.0 23.336506 2 ACGCAGA 14285 0.0 23.25616 7 CGCAGAG 14810 0.0 22.17287 8 ACATGGG 17170 0.0 21.646065 3 GCAGAGT 16410 0.0 18.883389 9 CATGGGG 11670 0.0 18.09992 4 AGAGTAC 14100 0.0 17.987665 10-11 GTGGTAT 2715 0.0 17.340847 1 GAGTACA 13015 0.0 16.881178 1 GTATAGC 1515 0.0 16.322838 1 CAGAGTA 15260 0.0 16.06061 10-11 AGTACAT 12790 0.0 15.8461 2 >>END_MODULE