##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920885_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3213217 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.18869220472816 31.0 30.0 34.0 26.0 34.0 2 30.179777774112363 31.0 30.0 34.0 26.0 34.0 3 30.321706252643377 31.0 30.0 34.0 26.0 34.0 4 33.9673402076486 35.0 35.0 37.0 30.0 37.0 5 33.49605115371916 35.0 35.0 37.0 28.0 37.0 6 33.445495900214645 35.0 35.0 37.0 28.0 37.0 7 33.25677381888618 35.0 33.0 37.0 27.0 37.0 8 33.18904014263587 35.0 33.0 37.0 27.0 37.0 9 34.497499235190155 38.0 34.0 39.0 27.0 39.0 10-11 34.308858692083355 37.5 34.0 39.0 27.0 39.0 12-13 34.12490535186388 37.0 34.0 39.0 26.0 39.0 14-15 35.01319238632187 38.0 34.0 40.0 25.5 41.0 16-17 34.90194313051375 38.0 34.0 40.0 25.0 41.0 18-19 34.83057898050458 38.5 34.0 40.0 25.0 41.0 20-21 34.72920829810125 38.0 34.0 40.0 25.0 41.0 22-23 34.58188429228403 38.0 33.5 40.0 24.0 41.0 24-25 34.40176169240982 38.0 33.0 40.0 23.5 41.0 26-27 34.23084575364814 38.0 33.0 40.0 23.0 41.0 28-29 34.166749864699455 38.0 33.0 40.0 22.5 41.0 30-31 34.138604862354455 38.0 33.0 40.0 22.0 41.0 32-33 33.97611210198377 38.0 33.0 40.0 21.5 41.0 34-35 33.79772250053451 38.0 33.0 40.0 19.5 41.0 36-37 33.60194222799145 38.0 33.0 40.0 18.5 41.0 38-39 33.412439153658156 38.0 32.0 40.0 17.0 41.0 40-41 33.17429386188359 38.0 32.0 40.0 15.5 41.0 42-43 33.16578945648551 38.0 32.0 40.0 15.0 41.0 44-45 33.00397436587694 38.0 32.0 40.0 14.0 41.0 46-47 32.73418819830718 37.5 31.5 40.0 9.0 41.0 48-49 32.45998807425704 37.0 31.0 40.0 8.5 41.0 50-51 32.197278148347905 37.0 31.0 40.0 7.5 41.0 52-53 31.946852640204504 37.0 30.5 40.0 6.0 41.0 54-55 31.66874303851872 36.0 30.0 40.0 2.0 41.0 56-57 31.35707221143172 36.0 30.0 39.0 2.0 41.0 58-59 31.0353784073718 35.5 29.0 39.0 2.0 41.0 60-61 30.723675525182394 35.0 29.0 39.0 2.0 40.0 62-63 30.417741160961118 35.0 28.5 39.0 2.0 40.0 64-65 30.02434133766876 35.0 28.0 38.0 2.0 40.0 66-67 29.60078170879838 34.0 28.0 38.0 2.0 40.0 68-69 29.174136387302816 34.0 27.5 37.0 2.0 40.0 70-71 28.75908038579405 34.0 26.5 37.0 2.0 39.0 72-73 28.32898711789462 34.0 26.0 36.0 2.0 39.0 74-75 27.886101063202393 33.5 26.0 36.0 2.0 38.5 76-77 26.425637764271755 31.5 24.0 34.5 2.0 36.5 78-79 27.256816455284536 33.0 26.0 35.0 2.0 37.0 80-81 27.27451569564085 33.0 26.0 35.0 2.0 37.0 82-83 26.93149404475328 33.0 25.0 35.0 2.0 36.0 84-85 26.611562337682145 33.0 25.0 35.0 2.0 36.0 86-87 26.076469936515338 32.5 23.5 35.0 2.0 35.5 88-89 25.708163500940024 32.0 21.5 35.0 2.0 35.0 90-91 25.346557982234003 32.0 20.0 35.0 2.0 35.0 92-93 25.04425175766218 32.0 19.0 34.0 2.0 35.0 94-95 24.669120386204852 32.0 16.5 34.0 2.0 35.0 96-97 24.15297270616955 32.0 4.5 34.0 2.0 35.0 98-99 23.57070297462014 31.0 2.0 34.0 2.0 35.0 100-101 21.42179130758987 28.0 2.0 33.0 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 81442.0 3 35427.0 4 18830.0 5 13125.0 6 11174.0 7 11395.0 8 12837.0 9 14701.0 10 16778.0 11 18570.0 12 20895.0 13 23073.0 14 25421.0 15 27496.0 16 30030.0 17 31327.0 18 29088.0 19 27022.0 20 26791.0 21 27495.0 22 29979.0 23 33752.0 24 39233.0 25 46038.0 26 54185.0 27 64159.0 28 75735.0 29 89765.0 30 105251.0 31 124501.0 32 150746.0 33 183030.0 34 230996.0 35 299903.0 36 397868.0 37 473491.0 38 288640.0 39 23028.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.69362570995044 19.1886031243744 12.900907227321968 24.216863938353196 2 16.184839056932663 21.113980163804687 38.008326235047306 24.692854544215344 3 19.698457583147487 25.139978492381292 28.937053642989092 26.22451028148213 4 13.380772683300943 16.12569580964167 35.96786483084558 34.525666676211806 5 14.120661289750307 37.8394730895856 33.391596747457356 14.648268873206735 6 33.24562146857452 35.111155005121894 17.236627627305786 14.406595898997804 7 29.703613368143806 32.0890366024198 20.298833171840915 17.908516857595476 8 27.217814621518126 34.1406923594421 20.033752655232767 18.607740363807007 9 27.770452064225402 15.438767302128598 19.31692491235375 37.473855721292246 10-11 25.899880855051943 25.822252811621365 27.03093219705278 21.246934136273904 12-13 26.581067677041958 23.009717555738035 27.382251537271923 23.026963229948088 14-15 23.415074304686602 24.444631043954672 25.228790386504013 26.911504264854706 16-17 23.47091722699583 27.883106476710644 25.726637224666383 22.91933907162715 18-19 23.356277768866477 26.436848555824277 27.76195200044851 22.444921674860737 20-21 24.262791634573293 25.78115319450732 27.323285124262835 22.63277004665655 22-23 23.950140297964 25.721116895450646 27.113475098882926 23.215267707702424 24-25 23.507761361394653 25.940853999650297 27.278666481696263 23.272718157258787 26-27 23.165622643395604 26.246836904563004 27.186979483848845 23.400560968192547 28-29 23.30496212112367 26.18422373794807 27.34408870810187 23.16672543282639 30-31 23.374748941288683 26.268243392159622 27.013061278870975 23.343946387680724 32-33 23.075828678628287 26.24143800966452 26.89837872436073 23.784354587346463 34-35 23.564509208130506 26.096922135668084 26.969463841782677 23.369104814418744 36-37 23.6512076417961 25.894114393162702 26.883580806294034 23.571097158747165 38-39 23.459428412213775 25.976245197011078 27.209468299300244 23.354858091474902 40-41 23.533290135944146 25.781603733424895 27.246978919559933 23.438127211071023 42-43 23.530318069638604 25.743583374808228 26.89857746560852 23.82752108994465 44-45 23.278591307271334 25.981434094772037 26.951568015838923 23.78840658211771 46-47 23.248640191673704 25.930306894920513 26.807389686361883 24.0136632270439 48-49 23.39203637809502 25.954345304002818 26.69376556701881 23.95985275088335 50-51 23.138562943512415 26.12822337306931 26.79186953303539 23.941344150382886 52-53 23.465178298125103 25.856289916895513 26.771726205713755 23.90680557926563 54-55 22.977474809379846 25.8587905950038 26.997531439058044 24.166203156558307 56-57 22.962121715514723 26.02134146104244 26.765729605422152 24.250807218020682 58-59 22.876787492168756 25.6273320612457 27.004775152648957 24.491105293936585 60-61 22.84805679889256 25.847100832789355 26.993497500511292 24.311344867806792 62-63 22.7732750678519 25.806908443514853 26.8988726625333 24.52094382609995 64-65 22.456820868716488 25.65279320780403 26.928897660942024 24.96148826253746 66-67 22.513093813897772 26.041655802180475 26.621838823693324 24.823411560228433 68-69 22.848359937631795 25.674335601197342 26.591464726156318 24.885839735014553 70-71 22.418489447592982 25.65933185961709 26.71872040382087 25.20345828896906 72-73 22.579183801569727 25.85250553589176 26.38535846922941 25.182952193309106 74-75 22.35675214000013 25.910097723116486 26.283478336168393 25.44967180071499 76-77 22.384503414092947 25.615860373106514 26.67232523199624 25.327310980804295 78-79 22.34146297402572 25.944625336148142 26.329284086215885 25.384627603610248 80-81 22.170062317450924 26.077303147372888 26.260079837181827 25.492554697994358 82-83 22.292323149574145 25.93391242855204 25.981565150702124 25.79219927117169 84-85 22.06251627290326 25.75807023171058 26.113167741514786 26.066245753871375 86-87 22.06062905771779 25.75704409120774 26.186377567251768 25.995949283822707 88-89 21.95170684936698 25.73926308653936 26.058705728029352 26.250324336064306 90-91 21.756880797643756 25.85369385180032 26.03374817078698 26.35567717976895 92-93 21.88502785488134 25.756586986480524 26.012547384530098 26.345837774108038 94-95 21.657590496132176 25.542874090930596 26.071541054707243 26.72799435822999 96-97 21.75140904455738 25.42193529793751 26.11934991378214 26.707305743722966 98-99 21.623577292830294 25.443274013311406 25.952920668567526 26.980228025290774 100-101 21.592824753703376 25.476973333563645 26.11602415340083 26.814177759332146 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 180.0 1 142.5 2 181.0 3 285.5 4 264.0 5 265.5 6 489.5 7 957.5 8 1431.0 9 1513.0 10 1239.0 11 1055.0 12 1061.0 13 1115.0 14 1175.0 15 1256.5 16 1409.5 17 1578.0 18 1695.0 19 1877.5 20 2069.5 21 2339.5 22 2772.5 23 3328.0 24 3972.5 25 4801.5 26 6066.0 27 7856.5 28 10071.5 29 13455.5 30 18213.5 31 23877.5 32 31196.5 33 37424.0 34 42052.5 35 48610.0 36 57982.5 37 67270.0 38 74749.5 39 81207.5 40 87226.5 41 94604.5 42 102120.5 43 109878.5 44 116586.5 45 120995.0 46 124958.5 47 129994.5 48 138759.0 49 145127.5 50 144315.5 51 141089.5 52 136663.0 53 134015.0 54 129486.5 55 119907.5 56 109179.5 57 97874.0 58 88772.0 59 79504.5 60 67783.5 61 55864.5 62 45127.5 63 34432.5 64 25270.5 65 18860.0 66 13818.0 67 10098.0 68 7394.5 69 5337.5 70 4113.5 71 3552.0 72 3123.5 73 2800.5 74 2226.0 75 1667.0 76 1081.0 77 566.0 78 294.5 79 162.5 80 91.5 81 38.5 82 21.0 83 10.5 84 7.0 85 6.5 86 2.5 87 3.0 88 2.5 89 2.0 90 2.5 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1961585538729566 2 0.0 3 0.012510826377427979 4 0.012853162422581482 5 0.006940085279020994 6 0.10783585422335311 7 0.1432831956260657 8 0.1241123770974696 9 0.14253628061845808 10-11 0.11455808929182187 12-13 0.11566290107390817 14-15 0.11605191930703716 16-17 0.06716010776738701 18-19 0.07973317706211562 20-21 0.03843500143314317 22-23 0.08491489992739364 24-25 0.0588973604957275 26-27 0.06726903287266313 28-29 0.041531586568849845 30-31 0.02555071755191137 32-33 0.03283313887608586 34-35 0.020182265934731453 36-37 0.02422805555927284 38-39 0.03188393438725116 40-41 0.025877492867739715 42-43 0.013382227219636892 44-45 0.027293519236329198 46-47 0.033969072116822485 48-49 0.009165269572518757 50-51 0.01590306537031268 52-53 0.0066444314218429695 54-55 0.0128842838812318 56-57 0.005461815993130871 58-59 0.0039213037899401134 60-61 0.023652308574241953 62-63 0.010487931565157286 64-65 0.007329103512149973 66-67 0.0404423355160887 68-69 0.09110807019880698 70-71 0.021893946160498962 72-73 0.0450949935843113 74-75 0.08776251339389776 76-77 0.25041881702978663 78-79 0.08026224185917105 80-81 0.01722572736295121 82-83 0.01210624741497384 84-85 0.013615638159514281 86-87 0.2675978622047624 88-89 0.6272685598264917 90-91 0.26853150596427194 92-93 0.3533686022450398 94-95 0.0012759798046630526 96-97 0.004216957647118137 98-99 0.003376678263559542 100-101 0.00530620869987928 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3213217.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.30475322832996 #Duplication Level Percentage of deduplicated Percentage of total 1 71.01274053406237 30.041764643609326 2 11.791781155282434 9.976967837933897 3 5.540820813610789 7.032091716065965 4 3.1251144893873954 5.288287891352486 5 2.0344593297928504 4.303364994998004 6 1.3477309005633513 3.4209253899916483 7 0.9489381410523592 2.8101215720319153 8 0.7303518805348548 2.4717884860699 9 0.5128117617025043 1.9524937528268633 >10 2.712709941537923 19.818444638833444 >50 0.1536610716218438 4.46230363364428 >100 0.08355020919759128 6.46300999851974 >500 0.004367451772018362 1.2721155875747392 >1k 9.623198817621938E-4 0.6863198565478185 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4219 0.13130143404569314 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 1.5560729325159178E-5 0.0 12-13 0.0 0.0 0.0 4.6682187975477534E-5 0.0 14-15 0.0 0.0 0.0 6.224291730063671E-5 0.0 16-17 0.0 0.0 0.0 7.780364662579589E-5 0.0 18-19 0.0 0.0 0.0 1.0892510527611425E-4 0.0 20-21 0.0 1.5560729325159178E-5 0.0 1.7116802257675096E-4 0.0 22-23 0.0 3.1121458650318356E-5 0.0 4.979433384050937E-4 0.0 24-25 0.0 3.1121458650318356E-5 0.0 0.0012448583460127343 0.0 26-27 0.0 3.1121458650318356E-5 0.0 0.002878734925154448 0.0 28-29 0.0 3.1121458650318356E-5 0.0 0.011514939700617791 0.0 30-31 3.1121458650318356E-5 3.1121458650318356E-5 0.0 0.04279200564418774 0.0 32-33 3.1121458650318356E-5 3.1121458650318356E-5 0.0 0.10573515576445662 0.0 34-35 3.1121458650318356E-5 3.1121458650318356E-5 0.0 0.1961585538729566 0.0 36-37 3.1121458650318356E-5 3.1121458650318356E-5 0.0 0.3366096967618434 0.0 38-39 3.1121458650318356E-5 3.1121458650318356E-5 0.0 0.5724947926019313 0.0 40-41 4.6682187975477534E-5 3.1121458650318356E-5 0.0 0.8503782968906239 0.0 42-43 6.224291730063671E-5 3.1121458650318356E-5 0.0 1.1255386735474135 0.0 44-45 6.224291730063671E-5 3.1121458650318356E-5 0.0 1.4536210906390699 0.0 46-47 6.224291730063671E-5 3.1121458650318356E-5 0.0 1.8420946982416688 0.0 48-49 6.224291730063671E-5 3.1121458650318356E-5 0.0 2.2707149875031782 0.0 50-51 6.224291730063671E-5 3.1121458650318356E-5 0.0 2.746359800785319 0.0 52-53 6.224291730063671E-5 3.1121458650318356E-5 0.0 3.2117189719835295 0.0 54-55 6.224291730063671E-5 3.1121458650318356E-5 0.0 3.713459128343962 0.0 56-57 7.780364662579589E-5 3.1121458650318356E-5 0.0 4.296255123759148 0.0 58-59 9.336437595095507E-5 3.1121458650318356E-5 0.0 4.938773198324297 0.0 60-61 9.336437595095507E-5 3.1121458650318356E-5 0.0 5.635318125106396 0.0 62-63 9.336437595095507E-5 3.1121458650318356E-5 0.0 6.321608531263217 0.0 64-65 9.336437595095507E-5 3.1121458650318356E-5 0.0 7.021187800263723 0.0 66-67 9.336437595095507E-5 3.1121458650318356E-5 0.0 7.801698422484383 0.0 68-69 9.336437595095507E-5 3.1121458650318356E-5 0.0 8.67292809667072 0.0 70-71 9.336437595095507E-5 3.1121458650318356E-5 0.0 9.618522496301992 0.0 72-73 9.336437595095507E-5 3.1121458650318356E-5 0.0 10.543234397178903 1.5560729325159178E-5 74-75 9.336437595095507E-5 3.1121458650318356E-5 0.0 11.473268067485016 3.1121458650318356E-5 76-77 9.336437595095507E-5 3.1121458650318356E-5 0.0 12.46247919141471 3.1121458650318356E-5 78-79 9.336437595095507E-5 3.1121458650318356E-5 0.0 13.54508581275401 3.1121458650318356E-5 80-81 9.336437595095507E-5 3.1121458650318356E-5 0.0 14.69239394662732 3.1121458650318356E-5 82-83 9.336437595095507E-5 3.1121458650318356E-5 0.0 15.858390516420148 3.1121458650318356E-5 84-85 9.336437595095507E-5 3.1121458650318356E-5 0.0 16.995677540608057 3.1121458650318356E-5 86-87 9.336437595095507E-5 3.1121458650318356E-5 0.0 18.13466068429241 3.1121458650318356E-5 88-89 9.336437595095507E-5 3.1121458650318356E-5 0.0 19.34670145215838 3.1121458650318356E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 4325 0.0 49.14868 1 GTATCAA 8290 0.0 47.6691 1 ATCAACG 11025 0.0 35.17393 3 TCAACGC 11135 0.0 34.826454 4 CAACGCA 11245 0.0 34.31319 5 TATCAAC 11710 0.0 33.31695 2 AACGCAG 11695 0.0 33.278 6 GTACATG 17430 0.0 29.656685 1 TACATGG 17430 0.0 29.190918 2 ACGCAGA 14040 0.0 27.178516 7 ACATGGG 18215 0.0 26.944416 3 CGCAGAG 14215 0.0 26.709955 8 CATGGGA 9995 0.0 24.456923 4 GCAGAGT 15265 0.0 23.504717 9 GAGTACA 12280 0.0 23.235035 1 CATGGGG 7485 0.0 22.068094 4 AGTACAT 13020 0.0 20.778502 2 GTGGTAT 2555 0.0 20.101261 1 ATGGGAT 3955 0.0 19.920105 5 ATGGGAG 4260 0.0 19.830809 5 >>END_MODULE